HEADER VIRUS 06-MAY-15 5A1Z TITLE Cryo-EM structure of Dengue virus serotype 2 strain PVP94-07 TITLE 2 complexed with human antibody 2D22 Fab at 37 degrees C COMPND MOL_ID: 4; COMPND 2 MOLECULE: ANTIGEN-BINDING FRAGMENT OF HUMAN ANTIBODY 2D22 - LIGHT COMPND 3 CHAIN; COMPND 4 CHAIN: H, J, L; COMPND 5 180 COPIES OF FAB 2D22 MOLECULE BIND TO VIRUS SURFACE; EXPDTA ELECTRON MICROSCOPY DBREF 5A1Z J 1 115 PDB 5A1Z 5A1Z 1 115 SEQRES 1 J 110 SER VAL LEU THR GLN PRO PRO SER ALA SER GLY THR PRO SEQRES 2 J 110 GLY GLN ARG VAL THR ILE SER CYS SER GLY SER SER SER SEQRES 3 J 110 ASN VAL GLY SER ASN TYR VAL TYR TRP TYR GLN GLN LEU SEQRES 4 J 110 PRO GLY THR ALA PRO LYS LEU LEU ILE TYR ARG ASN ASN SEQRES 5 J 110 ARG ARG PRO SER GLY VAL PRO ASP ARG PHE SER GLY SER SEQRES 6 J 110 LYS SER GLY THR SER ALA SER LEU ALA ILE SER GLY LEU SEQRES 7 J 110 ARG SER GLU ASP GLU ALA ASP TYR TYR CYS ALA THR TRP SEQRES 8 J 110 ASP ASP SER LEU SER GLY LEU VAL PHE GLY GLY GLY THR SEQRES 9 J 110 LYS LEU THR VAL LEU GLY ATOM 1 CA SER J 2 -66.120-178.682-132.288 1.00 0.00 ATOM 2 CA VAL J 3 -69.523-179.234-134.003 1.00 0.00 ATOM 3 CA LEU J 4 -72.372-181.330-132.964 1.00 0.00 ATOM 4 CA THR J 5 -72.408-184.633-134.721 1.00 0.00 ATOM 5 CA GLN J 6 -75.026-187.380-134.287 1.00 0.00 ATOM 6 CA PRO J 7 -75.162-190.953-135.768 1.00 0.00 ATOM 7 CA PRO J 8 -75.538-190.506-139.552 1.00 0.00 ATOM 8 CA SER J 9 -78.441-193.068-139.734 1.00 0.00 ATOM 9 CA ALA J 10 -80.363-195.008-137.098 1.00 0.00 ATOM 10 CA SER J 11 -82.999-197.818-137.342 1.00 0.00 ATOM 11 CA GLY J 12 -85.449-199.658-135.056 1.00 0.00 ATOM 12 CA THR J 13 -88.822-201.341-135.037 1.00 0.00 ATOM 13 CA PRO J 14 -91.632-199.422-133.153 1.00 0.00 ATOM 14 CA GLY J 15 -92.321-200.299-129.532 1.00 0.00 ATOM 15 CA GLN J 16 -88.593-200.326-128.703 1.00 0.00 ATOM 16 CA ARG J 17 -86.837-197.841-126.317 1.00 0.00 ATOM 17 CA VAL J 18 -84.362-196.083-128.598 1.00 0.00 ATOM 18 CA THR J 19 -81.699-193.514-127.694 1.00 0.00 ATOM 19 CA ILE J 20 -80.532-190.963-130.250 1.00 0.00 ATOM 20 CA SER J 21 -77.150-189.703-129.086 1.00 0.00 ATOM 21 CA CYS J 22 -75.858-186.178-129.361 1.00 0.00 ATOM 22 CA SER J 23 -72.130-185.983-129.181 1.00 0.00 ATOM 23 CA GLY J 24 -70.434-182.639-128.879 1.00 0.00 ATOM 24 CA SER J 25 -67.858-181.184-126.526 1.00 0.00 ATOM 25 CA SER J 26 -67.600-180.310-122.924 1.00 0.00 ATOM 26 CA SER J 27 -68.053-176.451-123.192 1.00 0.00 ATOM 27 CA ASN J 28 -71.344-176.563-125.019 1.00 0.00 ATOM 28 CA VAL J 29 -73.357-179.754-124.223 1.00 0.00 ATOM 29 CA GLY J 30 -72.798-179.809-120.591 1.00 0.00 ATOM 30 CA SER J 31 -72.459-175.956-120.283 1.00 0.00 ATOM 31 CA ASN J 32 -75.720-174.681-121.885 1.00 0.00 ATOM 32 CA TYR J 33 -79.473-175.357-122.231 1.00 0.00 ATOM 33 CA VAL J 34 -79.758-177.970-124.968 1.00 0.00 ATOM 34 CA TYR J 35 -82.623-178.006-127.523 1.00 0.00 ATOM 35 CA TRP J 36 -83.824-181.011-129.532 1.00 0.00 ATOM 36 CA TYR J 37 -85.619-180.607-132.873 1.00 0.00 ATOM 37 CA GLN J 38 -87.442-183.109-135.036 1.00 0.00 ATOM 38 CA GLN J 39 -87.483-182.606-138.824 1.00 0.00 ATOM 39 CA LEU J 40 -90.047-184.564-140.676 1.00 0.00 ATOM 40 CA PRO J 41 -89.457-183.828-144.437 1.00 0.00 ATOM 41 CA GLY J 42 -90.859-180.770-146.123 1.00 0.00 ATOM 42 CA THR J 43 -91.662-179.156-142.818 1.00 0.00 ATOM 43 CA ALA J 44 -89.833-176.654-140.669 1.00 0.00 ATOM 44 CA PRO J 45 -88.318-178.337-137.510 1.00 0.00 ATOM 45 CA LYS J 46 -90.358-179.134-134.447 1.00 0.00 ATOM 46 CA LEU J 47 -89.278-178.476-130.753 1.00 0.00 ATOM 47 CA LEU J 48 -88.939-181.709-128.736 1.00 0.00 ATOM 48 CA ILE J 49 -86.996-180.854-125.609 1.00 0.00 ATOM 49 CA TYR J 50 -86.159-177.350-124.264 1.00 0.00 ATOM 50 CA ARG J 51 -83.999-176.502-121.148 1.00 0.00 ATOM 51 CA ASN J 52 -81.905-179.811-121.263 1.00 0.00 ATOM 52 CA ASN J 53 -84.679-182.308-120.660 1.00 0.00 ATOM 53 CA ARG J 54 -87.851-180.290-119.894 1.00 0.00 ATOM 54 CA ARG J 55 -90.773-181.019-122.197 1.00 0.00 ATOM 55 CA PRO J 56 -92.831-178.005-123.212 1.00 0.00 ATOM 56 CA SER J 57 -96.437-177.915-122.768 1.00 0.00 ATOM 57 CA GLY J 58 -98.198-179.121-125.917 1.00 0.00 ATOM 58 CA VAL J 59 -95.358-181.409-126.871 1.00 0.00 ATOM 59 CA PRO J 60 -95.871-185.257-126.359 1.00 0.00 ATOM 60 CA ASP J 61 -94.324-187.166-123.500 1.00 0.00 ATOM 61 CA ARG J 62 -93.022-190.007-125.672 1.00 0.00 ATOM 62 CA PHE J 63 -89.873-187.951-126.247 1.00 0.00 ATOM 63 CA SER J 64 -87.610-187.350-123.270 1.00 0.00 ATOM 64 CA GLY J 65 -84.193-185.802-122.954 1.00 0.00 ATOM 65 CA SER J 66 -81.451-186.955-120.842 1.00 0.00 ATOM 66 CA LYS J 67 -78.457-184.938-120.027 1.00 0.00 ATOM 67 CA SER J 68 -75.016-186.209-118.884 1.00 0.00 ATOM 68 CA GLY J 69 -71.843-184.245-118.025 1.00 0.00 ATOM 69 CA THR J 70 -70.723-183.839-121.664 1.00 0.00 ATOM 70 CA SER J 71 -73.503-185.712-123.544 1.00 0.00 ATOM 71 CA ALA J 72 -77.119-185.384-124.186 1.00 0.00 ATOM 72 CA SER J 73 -79.406-188.082-125.478 1.00 0.00 ATOM 73 CA LEU J 74 -82.922-188.053-126.687 1.00 0.00 ATOM 74 CA ALA J 75 -84.653-191.158-125.643 1.00 0.00 ATOM 75 CA ILE J 76 -87.859-192.135-127.381 1.00 0.00 ATOM 76 CA SER J 77 -90.100-194.438-125.622 1.00 0.00 ATOM 77 CA GLY J 78 -93.345-195.416-127.412 1.00 0.00 ATOM 78 CA LEU J 79 -91.851-195.145-130.864 1.00 0.00 ATOM 79 CA ARG J 80 -94.403-195.428-133.764 1.00 0.00 ATOM 80 CA SER J 81 -93.575-195.744-137.379 1.00 0.00 ATOM 81 CA GLU J 82 -95.006-192.337-138.251 1.00 0.00 ATOM 82 CA ASP J 83 -92.452-190.606-135.862 1.00 0.00 ATOM 83 CA GLU J 84 -89.882-191.617-138.522 1.00 0.00 ATOM 84 CA ALA J 85 -87.927-188.426-139.206 1.00 0.00 ATOM 85 CA ASP J 86 -84.419-186.756-138.880 1.00 0.00 ATOM 86 CA TYR J 87 -83.569-185.559-135.342 1.00 0.00 ATOM 87 CA TYR J 88 -81.081-182.611-134.743 1.00 0.00 ATOM 88 CA CYS J 89 -79.904-181.485-131.320 1.00 0.00 ATOM 89 CA ALA J 90 -78.820-177.866-131.111 1.00 0.00 ATOM 90 CA THR J 91 -76.981-175.959-128.362 1.00 0.00 ATOM 91 CA TRP J 92 -75.416-172.565-128.050 1.00 0.00 ATOM 92 CA ASP J 93 -71.559-172.756-128.208 1.00 0.00 ATOM 93 CA ASP J 94 -70.458-170.172-125.656 1.00 0.00 ATOM 94 CA SER J 95 -66.798-169.952-126.906 1.00 0.00 ATOM 95 CA LEU J 96 -67.361-169.146-130.659 1.00 0.00 ATOM 96 CA SER J 97 -70.787-167.498-129.895 1.00 0.00 ATOM 97 CA GLY J 98 -72.874-169.425-132.355 1.00 0.00 ATOM 98 CA LEU J 99 -75.793-171.873-132.260 1.00 0.00 ATOM 99 CA VAL J 100 -74.638-175.288-133.566 1.00 0.00 ATOM 100 CA PHE J 101 -76.916-177.967-135.053 1.00 0.00 ATOM 101 CA GLY J 102 -76.404-181.711-135.078 1.00 0.00 ATOM 102 CA GLY J 103 -75.185-184.042-137.895 1.00 0.00 ATOM 103 CA GLY J 104 -78.753-185.158-138.239 1.00 0.00 ATOM 104 CA THR J 105 -79.993-188.569-137.274 1.00 0.00 ATOM 105 CA LYS J 106 -82.313-190.136-139.870 1.00 0.00 ATOM 106 CA LEU J 107 -84.148-192.466-137.692 1.00 0.00 ATOM 107 CA THR J 108 -85.790-195.112-140.042 1.00 0.00 ATOM 108 CA VAL J 109 -88.699-197.022-138.546 1.00 0.00 ATOM 109 CA LEU J 110 -89.224-200.523-140.121 1.00 0.00 ATOM 110 CA GLY J 111 -92.857-201.522-140.749 1.00 0.00 TER