HEADER SIGNALING PROTEIN 19-JAN-15 5AF6 TITLE Structure of Lys33-linked diUb bound to Trabid NZF1 COMPND MOL_ID: 2; COMPND 2 MOLECULE: TRABID; COMPND 3 CHAIN: F, G, H, I, J; COMPND 4 FRAGMENT: NZF1, RESIDUES ; COMPND 5 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 3.40 ANGSTORMS DBREF 5AF6 J 1 33 UNP Q9UGI0 ZRAN1_HUMAN 1 33 SEQRES 1 J 28 GLY ILE LYS TRP ALA CYS GLU TYR CYS THR TYR GLU ASN SEQRES 2 J 28 TRP PRO SER ALA ILE LYS CYS THR MET CYS ARG ALA GLN SEQRES 3 J 28 ARG PRO ATOM 1 N GLY J 5 3.823 17.302 10.784 1.00 95.51 ATOM 2 CA GLY J 5 4.736 18.055 11.625 1.00110.74 ATOM 3 C GLY J 5 4.116 18.455 12.950 1.00134.51 ATOM 4 O GLY J 5 4.248 17.743 13.947 1.00137.34 ATOM 5 N ILE J 6 3.438 19.599 12.960 1.00141.29 ATOM 6 CA ILE J 6 2.780 20.100 14.164 1.00136.83 ATOM 7 C ILE J 6 1.609 21.007 13.800 1.00141.82 ATOM 8 O ILE J 6 1.531 21.513 12.679 1.00145.26 ATOM 9 CB ILE J 6 3.759 20.873 15.069 1.00128.47 ATOM 10 N LYS J 7 0.699 21.210 14.747 1.00135.20 ATOM 11 CA LYS J 7 -0.477 22.036 14.501 1.00116.10 ATOM 12 C LYS J 7 -0.153 23.520 14.646 1.00113.58 ATOM 13 O LYS J 7 0.285 23.970 15.705 1.00114.22 ATOM 14 CB LYS J 7 -1.617 21.648 15.447 1.00110.06 ATOM 15 CG LYS J 7 -2.040 20.188 15.338 1.00108.67 ATOM 16 CD LYS J 7 -3.359 19.925 16.052 1.00 99.67 ATOM 17 CE LYS J 7 -4.516 20.617 15.351 1.00 98.48 ATOM 18 NZ LYS J 7 -5.823 20.321 16.001 1.00 98.67 ATOM 19 N TRP J 8 -0.376 24.274 13.573 1.00118.89 ATOM 20 CA TRP J 8 -0.064 25.699 13.556 1.00118.16 ATOM 21 C TRP J 8 -1.264 26.546 13.966 1.00116.26 ATOM 22 O TRP J 8 -2.400 26.253 13.595 1.00116.51 ATOM 23 CB TRP J 8 0.427 26.122 12.168 1.00121.89 ATOM 24 CG TRP J 8 -0.531 25.813 11.054 1.00125.04 ATOM 25 CD1 TRP J 8 -0.604 24.657 10.333 1.00125.65 ATOM 26 CD2 TRP J 8 -1.546 26.680 10.526 1.00124.34 ATOM 27 NE1 TRP J 8 -1.603 24.747 9.393 1.00122.40 ATOM 28 CE2 TRP J 8 -2.195 25.976 9.491 1.00121.39 ATOM 29 CE3 TRP J 8 -1.967 27.976 10.830 1.00125.68 ATOM 30 CZ2 TRP J 8 -3.245 26.531 8.758 1.00124.16 ATOM 31 CZ3 TRP J 8 -3.009 28.524 10.101 1.00125.23 ATOM 32 CH2 TRP J 8 -3.636 27.801 9.078 1.00122.17 ATOM 33 N ALA J 9 -0.999 27.600 14.732 1.00115.80 ATOM 34 CA ALA J 9 -2.053 28.488 15.206 1.00106.87 ATOM 35 C ALA J 9 -2.230 29.690 14.282 1.00 99.87 ATOM 36 O ALA J 9 -1.253 30.278 13.819 1.00106.26 ATOM 37 CB ALA J 9 -1.755 28.951 16.624 1.00106.46 ATOM 38 N CYS J 10 -3.482 30.048 14.017 1.00 93.94 ATOM 39 CA CYS J 10 -3.789 31.195 13.169 1.00109.44 ATOM 40 C CYS J 10 -3.615 32.498 13.941 1.00120.58 ATOM 41 O CYS J 10 -3.929 32.572 15.129 1.00122.05 ATOM 42 CB CYS J 10 -5.212 31.091 12.618 1.00104.08 ATOM 43 SG CYS J 10 -5.674 32.431 11.498 1.00138.19 ATOM 44 N GLU J 11 -3.116 33.525 13.261 1.00124.02 ATOM 45 CA GLU J 11 -2.845 34.806 13.905 1.00139.49 ATOM 46 C GLU J 11 -4.121 35.571 14.240 1.00142.25 ATOM 47 O GLU J 11 -4.156 36.337 15.202 1.00153.12 ATOM 48 CB GLU J 11 -1.950 35.673 13.015 1.00148.02 ATOM 49 CG GLU J 11 -0.594 35.064 12.702 1.00151.94 ATOM 50 CD GLU J 11 0.291 35.999 11.898 1.00158.75 ATOM 51 OE1 GLU J 11 -0.121 37.155 11.664 1.00165.00 ATOM 52 OE2 GLU J 11 1.398 35.578 11.500 1.00155.16 ATOM 53 N TYR J 12 -5.169 35.357 13.451 1.00133.23 ATOM 54 CA TYR J 12 -6.377 36.168 13.564 1.00131.30 ATOM 55 C TYR J 12 -7.434 35.572 14.495 1.00135.66 ATOM 56 O TYR J 12 -8.013 36.287 15.314 1.00138.72 ATOM 57 CB TYR J 12 -6.981 36.399 12.177 1.00120.98 ATOM 58 CG TYR J 12 -6.080 37.181 11.246 1.00122.46 ATOM 59 CD1 TYR J 12 -6.102 38.570 11.229 1.00134.77 ATOM 60 CD2 TYR J 12 -5.204 36.530 10.386 1.00115.15 ATOM 61 CE1 TYR J 12 -5.278 39.290 10.381 1.00143.58 ATOM 62 CE2 TYR J 12 -4.376 37.241 9.534 1.00124.19 ATOM 63 CZ TYR J 12 -4.417 38.619 9.535 1.00142.74 ATOM 64 OH TYR J 12 -3.594 39.328 8.687 1.00151.23 ATOM 65 N CYS J 13 -7.688 34.272 14.378 1.00126.30 ATOM 66 CA CYS J 13 -8.765 33.662 15.151 1.00116.28 ATOM 67 C CYS J 13 -8.275 32.647 16.183 1.00118.63 ATOM 68 O CYS J 13 -9.076 31.871 16.706 1.00118.81 ATOM 69 CB CYS J 13 -9.775 32.991 14.220 1.00104.05 ATOM 70 SG CYS J 13 -9.295 31.365 13.609 1.00 99.10 ATOM 71 N THR J 14 -6.968 32.636 16.452 1.00117.33 ATOM 72 CA THR J 14 -6.390 31.890 17.578 1.00114.74 ATOM 73 C THR J 14 -6.450 30.366 17.414 1.00114.50 ATOM 74 O THR J 14 -5.833 29.625 18.181 1.00121.08 ATOM 75 CB THR J 14 -7.091 32.278 18.903 1.00116.38 ATOM 76 OG1 THR J 14 -7.340 33.688 18.920 1.00133.30 ATOM 77 CG2 THR J 14 -6.246 31.896 20.123 1.00114.10 ATOM 78 N TYR J 15 -7.177 29.904 16.403 1.00103.43 ATOM 79 CA TYR J 15 -7.381 28.477 16.186 1.00 86.15 ATOM 80 C TYR J 15 -6.075 27.784 15.812 1.00 88.51 ATOM 81 O TYR J 15 -5.207 28.385 15.181 1.00 95.82 ATOM 82 CB TYR J 15 -8.429 28.264 15.093 1.00 79.59 ATOM 83 CG TYR J 15 -8.965 26.857 14.998 1.00 86.02 ATOM 84 CD1 TYR J 15 -8.308 25.896 14.241 1.00 97.95 ATOM 85 CD2 TYR J 15 -10.135 26.490 15.657 1.00 83.33 ATOM 86 CE1 TYR J 15 -8.796 24.608 14.146 1.00 98.91 ATOM 87 CE2 TYR J 15 -10.631 25.204 15.566 1.00 90.33 ATOM 88 CZ TYR J 15 -9.957 24.268 14.809 1.00 93.95 ATOM 89 OH TYR J 15 -10.441 22.983 14.714 1.00 90.75 ATOM 90 N GLU J 16 -5.932 26.525 16.213 1.00 81.95 ATOM 91 CA GLU J 16 -4.763 25.737 15.838 1.00 94.79 ATOM 92 C GLU J 16 -5.150 24.689 14.804 1.00108.16 ATOM 93 O GLU J 16 -5.804 23.698 15.133 1.00118.37 ATOM 94 CB GLU J 16 -4.137 25.062 17.060 1.00104.70 ATOM 95 CG GLU J 16 -3.548 26.016 18.081 1.00120.82 ATOM 96 CD GLU J 16 -2.868 25.287 19.223 1.00134.51 ATOM 97 OE1 GLU J 16 -2.766 24.043 19.161 1.00140.25 ATOM 98 OE2 GLU J 16 -2.436 25.957 20.184 1.00143.70 ATOM 99 N ASN J 17 -4.747 24.911 13.557 1.00106.35 ATOM 100 CA ASN J 17 -5.090 24.003 12.468 1.00 91.62 ATOM 101 C ASN J 17 -4.012 22.958 12.209 1.00 88.56 ATOM 102 O ASN J 17 -2.888 23.081 12.688 1.00 84.99 ATOM 103 CB ASN J 17 -5.351 24.791 11.184 1.00 90.17 ATOM 104 CG ASN J 17 -6.581 25.667 11.279 1.00 94.19 ATOM 105 OD1 ASN J 17 -7.673 25.267 10.877 1.00105.89 ATOM 106 ND2 ASN J 17 -6.411 26.873 11.809 1.00 91.09 ATOM 107 N TRP J 18 -4.367 21.932 11.442 1.00 93.55 ATOM 108 CA TRP J 18 -3.421 20.894 11.045 1.00100.35 ATOM 109 C TRP J 18 -2.419 21.437 10.026 1.00109.48 ATOM 110 O TRP J 18 -2.742 22.346 9.262 1.00114.68 ATOM 111 CB TRP J 18 -4.167 19.685 10.470 1.00102.62 ATOM 112 CG TRP J 18 -5.071 19.013 11.458 1.00105.45 ATOM 113 CD1 TRP J 18 -6.385 19.294 11.686 1.00 99.13 ATOM 114 CD2 TRP J 18 -4.727 17.950 12.353 1.00108.40 ATOM 115 NE1 TRP J 18 -6.882 18.471 12.667 1.00 95.46 ATOM 116 CE2 TRP J 18 -5.882 17.635 13.094 1.00100.04 ATOM 117 CE3 TRP J 18 -3.552 17.230 12.602 1.00110.60 ATOM 118 CZ2 TRP J 18 -5.901 16.636 14.064 1.00102.46 ATOM 119 CZ3 TRP J 18 -3.572 16.238 13.566 1.00104.88 ATOM 120 CH2 TRP J 18 -4.738 15.950 14.284 1.00102.89 ATOM 121 N PRO J 19 -1.196 20.881 10.011 1.00106.20 ATOM 122 CA PRO J 19 -0.147 21.376 9.110 1.00113.97 ATOM 123 C PRO J 19 -0.482 21.213 7.627 1.00109.75 ATOM 124 O PRO J 19 0.064 21.942 6.797 1.00108.20 ATOM 125 CB PRO J 19 1.068 20.520 9.485 1.00116.88 ATOM 126 CG PRO J 19 0.495 19.297 10.113 1.00109.30 ATOM 127 CD PRO J 19 -0.716 19.770 10.851 1.00 99.63 ATOM 128 N SER J 20 -1.367 20.275 7.304 1.00108.94 ATOM 129 CA SER J 20 -1.746 20.028 5.918 1.00105.05 ATOM 130 C SER J 20 -2.830 20.997 5.456 1.00103.20 ATOM 131 O SER J 20 -3.153 21.062 4.270 1.00101.59 ATOM 132 CB SER J 20 -2.221 18.583 5.741 1.00101.40 ATOM 133 OG SER J 20 -3.342 18.310 6.563 1.00103.86 ATOM 134 N ALA J 21 -3.389 21.749 6.399 1.00103.52 ATOM 135 CA ALA J 21 -4.432 22.720 6.084 1.00107.60 ATOM 136 C ALA J 21 -3.838 23.964 5.432 1.00109.94 ATOM 137 O ALA J 21 -3.065 24.692 6.054 1.00101.93 ATOM 138 CB ALA J 21 -5.207 23.098 7.340 1.00 93.68 ATOM 139 N ILE J 22 -4.200 24.201 4.175 1.00116.70 ATOM 140 CA ILE J 22 -3.696 25.358 3.443 1.00123.16 ATOM 141 C ILE J 22 -4.269 26.652 4.009 1.00126.83 ATOM 142 O ILE J 22 -3.648 27.712 3.916 1.00129.08 ATOM 143 CB ILE J 22 -4.024 25.270 1.937 1.00123.26 ATOM 144 CG1 ILE J 22 -5.536 25.194 1.717 1.00126.06 ATOM 145 CG2 ILE J 22 -3.334 24.070 1.308 1.00121.02 ATOM 146 CD1 ILE J 22 -5.953 25.393 0.277 1.00125.64 ATOM 147 N LYS J 23 -5.458 26.558 4.597 1.00127.17 ATOM 148 CA LYS J 23 -6.101 27.707 5.219 1.00129.13 ATOM 149 C LYS J 23 -6.770 27.299 6.526 1.00134.25 ATOM 150 O LYS J 23 -6.919 26.110 6.810 1.00152.16 ATOM 151 CB LYS J 23 -7.124 28.339 4.270 1.00127.78 ATOM 152 CG LYS J 23 -8.292 27.436 3.903 1.00123.68 ATOM 153 CD LYS J 23 -9.260 28.149 2.970 1.00126.93 ATOM 154 CE LYS J 23 -10.462 27.280 2.640 1.00117.25 ATOM 155 NZ LYS J 23 -11.438 28.000 1.776 1.00107.89 ATOM 156 N CYS J 24 -7.169 28.288 7.320 1.00117.87 ATOM 157 CA CYS J 24 -7.782 28.027 8.618 1.00 98.63 ATOM 158 C CYS J 24 -9.158 27.386 8.477 1.00 94.97 ATOM 159 O CYS J 24 -9.852 27.582 7.479 1.00 97.85 ATOM 160 CB CYS J 24 -7.892 29.318 9.430 1.00 98.32 ATOM 161 SG CYS J 24 -8.868 29.148 10.942 1.00124.54 ATOM 162 N THR J 25 -9.544 26.619 9.489 1.00 88.50 ATOM 163 CA THR J 25 -10.821 25.920 9.483 1.00 99.44 ATOM 164 C THR J 25 -11.970 26.856 9.849 1.00104.64 ATOM 165 O THR J 25 -13.066 26.755 9.296 1.00117.98 ATOM 166 CB THR J 25 -10.804 24.724 10.459 1.00106.94 ATOM 167 OG1 THR J 25 -9.735 23.834 10.109 1.00102.58 ATOM 168 CG2 THR J 25 -12.119 23.969 10.415 1.00108.63 ATOM 169 N MET J 26 -11.711 27.773 10.776 1.00103.98 ATOM 170 CA MET J 26 -12.752 28.664 11.280 1.00101.91 ATOM 171 C MET J 26 -12.943 29.911 10.420 1.00113.84 ATOM 172 O MET J 26 -14.030 30.138 9.892 1.00127.90 ATOM 173 CB MET J 26 -12.446 29.069 12.723 1.00 92.78 ATOM 174 CG MET J 26 -12.594 27.924 13.709 1.00 92.96 ATOM 175 SD MET J 26 -14.283 27.281 13.771 1.00 98.97 ATOM 176 CE MET J 26 -13.976 25.553 14.134 1.00105.11 ATOM 177 N CYS J 27 -11.894 30.714 10.274 1.00113.73 ATOM 178 CA CYS J 27 -12.017 31.992 9.574 1.00101.56 ATOM 179 C CYS J 27 -11.506 31.947 8.133 1.00 99.38 ATOM 180 O CYS J 27 -11.434 32.981 7.467 1.00103.32 ATOM 181 CB CYS J 27 -11.279 33.088 10.345 1.00 95.52 ATOM 182 SG CYS J 27 -9.500 32.835 10.475 1.00 89.44 ATOM 183 N ARG J 28 -11.152 30.751 7.665 1.00101.80 ATOM 184 CA ARG J 28 -10.722 30.534 6.282 1.00112.81 ATOM 185 C ARG J 28 -9.552 31.424 5.859 1.00121.61 ATOM 186 O ARG J 28 -9.521 31.923 4.733 1.00130.85 ATOM 187 CB ARG J 28 -11.896 30.751 5.322 1.00115.99 ATOM 188 CG ARG J 28 -13.110 29.881 5.600 1.00125.54 ATOM 189 CD ARG J 28 -14.174 30.097 4.536 1.00140.31 ATOM 190 NE ARG J 28 -15.391 29.333 4.796 1.00142.72 ATOM 191 CZ ARG J 28 -16.457 29.817 5.424 1.00133.87 ATOM 192 NH1 ARG J 28 -16.461 31.069 5.862 1.00124.00 ATOM 193 NH2 ARG J 28 -17.522 29.050 5.614 1.00135.04 ATOM 194 N ALA J 29 -8.593 31.621 6.758 1.00119.27 ATOM 195 CA ALA J 29 -7.412 32.422 6.450 1.00118.65 ATOM 196 C ALA J 29 -6.219 31.524 6.140 1.00131.97 ATOM 197 O ALA J 29 -6.038 30.485 6.771 1.00146.35 ATOM 198 CB ALA J 29 -7.089 33.359 7.603 1.00100.21 ATOM 199 N GLN J 30 -5.406 31.934 5.170 1.00129.11 ATOM 200 CA GLN J 30 -4.267 31.132 4.729 1.00130.50 ATOM 201 C GLN J 30 -3.197 31.011 5.812 1.00133.55 ATOM 202 O GLN J 30 -3.148 31.815 6.742 1.00136.71 ATOM 203 CB GLN J 30 -3.659 31.727 3.457 1.00133.43 ATOM 204 CG GLN J 30 -4.618 31.767 2.278 1.00133.87 ATOM 205 CD GLN J 30 -3.989 32.361 1.033 1.00141.23 ATOM 206 OE1 GLN J 30 -2.804 32.695 1.019 1.00146.77 ATOM 207 NE2 GLN J 30 -4.784 32.495 -0.023 1.00144.62 ATOM 208 N ARG J 31 -2.344 29.998 5.680 1.00133.49 ATOM 209 CA ARG J 31 -1.305 29.718 6.672 1.00134.65 ATOM 210 C ARG J 31 -0.317 30.874 6.900 1.00146.48 ATOM 211 O ARG J 31 -0.018 31.195 8.052 1.00142.47 ATOM 212 CB ARG J 31 -0.529 28.452 6.287 1.00126.39 ATOM 213 CG ARG J 31 0.570 28.089 7.274 1.00124.75 ATOM 214 CD ARG J 31 1.622 27.186 6.650 1.00130.36 ATOM 215 NE ARG J 31 1.114 25.849 6.359 1.00133.22 ATOM 216 CZ ARG J 31 1.859 24.861 5.874 1.00133.49 ATOM 217 NH1 ARG J 31 3.146 25.061 5.625 1.00135.20 ATOM 218 NH2 ARG J 31 1.319 23.672 5.639 1.00127.48 ATOM 219 N PRO J 32 0.204 31.498 5.822 1.00150.44 ATOM 220 CA PRO J 32 1.124 32.611 6.093 1.00155.93 ATOM 221 C PRO J 32 0.438 33.794 6.771 1.00158.83 ATOM 222 O PRO J 32 0.637 33.989 7.971 1.00157.95 ATOM 223 CB PRO J 32 1.625 33.006 4.698 1.00157.98 ATOM 224 CG PRO J 32 1.389 31.808 3.849 1.00156.20 ATOM 225 CD PRO J 32 0.130 31.203 4.378 1.00150.20 TER