HEADER MEMBRANE PROTEIN 31-DEC-69 5B0W TITLE Crystal structure of the 11-cis isomer of pharaonis halorhodopsin in TITLE 2 the absence of halide ions COMPND MOL_ID: 1; COMPND 2 MOLECULE: Halorhodopsin; COMPND 3 CHAIN: A, B, D, E, F, G; COMPND 4 MOL_ID: 1; COMPND 5 Halorhodopsin; COMPND 6 CHAIN: A, B, D, E, F, G; COMPND 7 MOL_ID: 1; COMPND 8 Halorhodopsin; COMPND 9 CHAIN: A, B, D, E, F, G; COMPND 10 MOL_ID: 1; COMPND 11 Halorhodopsin; COMPND 12 CHAIN: A, B, D, E, F, G; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 1.70 ANGSTORMS DBREF 5B0W A 1 291 UNP Q3ITX1 Q3ITX1_NATP 1 291 DBREF 5B0W E 1 291 UNP Q3ITX1 Q3ITX1_NATP 1 291 DBREF 5B0W F 1 291 UNP Q3ITX1 Q3ITX1_NATP 1 291 DBREF 5B0W G 1 291 UNP Q3ITX1 Q3ITX1_NATP 1 291 SEQRES 1 E 260 GLU VAL THR GLN ARG GLU LEU PHE GLU PHE VAL LEU ASN SEQRES 2 E 260 ASP PRO LEU LEU ALA SER SER LEU TYR ILE ASN ILE ALA SEQRES 3 E 260 LEU ALA GLY LEU SER ILE LEU LEU PHE VAL PHE MET THR SEQRES 4 E 260 ARG GLY LEU ASP ASP PRO ARG ALA LYS LEU ILE ALA VAL SEQRES 5 E 260 SER THR ILE LEU VAL PRO VAL VAL SER ILE ALA SER TYR SEQRES 6 E 260 THR GLY LEU ALA SER GLY LEU THR ILE SER VAL LEU GLU SEQRES 7 E 260 MET PRO ALA GLY HIS PHE ALA GLU GLY SER SER VAL MET SEQRES 8 E 260 LEU GLY GLY GLU GLU VAL ASP GLY VAL VAL THR MET TRP SEQRES 9 E 260 GLY ARG TYR LEU THR TRP ALA LEU SER THR PRO MET ILE SEQRES 10 E 260 LEU LEU ALA LEU GLY LEU LEU ALA GLY SER ASN ALA THR SEQRES 11 E 260 LYS LEU PHE THR ALA ILE THR PHE ASP ILE ALA MET CYS SEQRES 12 E 260 VAL THR GLY LEU ALA ALA ALA LEU THR THR SER SER HIS SEQRES 13 E 260 LEU MET ARG TRP PHE TRP TYR ALA ILE SER CYS ALA CYS SEQRES 14 E 260 PHE ILE VAL VAL LEU TYR ILE LEU LEU VAL GLU TRP ALA SEQRES 15 E 260 GLN ASP ALA LYS ALA ALA GLY THR ALA ASP ILE PHE SER SEQRES 16 E 260 THR LEU LYS LEU LEU THR VAL VAL MET TRP LEU GLY TYR SEQRES 17 E 260 PRO ILE VAL TRP ALA LEU GLY VAL GLU GLY VAL ALA VAL SEQRES 18 E 260 LEU PRO VAL GLY TYR THR SER TRP ALA TYR SER ALA LEU SEQRES 19 E 260 ASP ILE VAL ALA LYS TYR ILE PHE ALA PHE LEU LEU LEU SEQRES 20 E 260 ASN TYR LEU THR SER ASN GLU GLY VAL VAL SER GLY SER ATOM 1 C1 RET E 301 40.378 -5.492 22.631 0.35 13.55 ATOM 2 C2 RET E 301 40.545 -6.731 21.665 0.35 15.13 ATOM 3 C3 RET E 301 40.990 -6.368 20.337 0.35 16.59 ATOM 4 C4 RET E 301 42.360 -5.728 20.396 0.35 15.67 ATOM 5 C5 RET E 301 42.337 -4.446 21.252 0.35 16.87 ATOM 6 C6 RET E 301 41.444 -4.301 22.297 0.35 14.43 ATOM 7 C7 RET E 301 41.510 -2.964 23.115 0.35 13.69 ATOM 8 C8 RET E 301 40.787 -2.726 24.223 0.35 15.10 ATOM 9 C9 RET E 301 40.877 -1.487 24.991 0.35 11.65 ATOM 10 C10 RET E 301 40.067 -1.395 26.087 0.35 11.96 ATOM 11 C11 RET E 301 40.032 -0.204 26.929 0.35 11.01 ATOM 12 C12 RET E 301 39.272 0.005 28.056 0.35 8.55 ATOM 13 C13 RET E 301 38.310 -0.912 28.795 0.35 9.60 ATOM 14 C14 RET E 301 37.643 -0.392 29.863 0.35 9.29 ATOM 15 C15 RET E 301 36.652 -1.170 30.621 0.35 11.86 ATOM 16 C16 RET E 301 40.574 -6.031 24.075 0.35 11.27 ATOM 17 C17 RET E 301 38.926 -4.979 22.484 0.35 11.99 ATOM 18 C18 RET E 301 43.348 -3.318 20.889 0.35 19.12 ATOM 19 C19 RET E 301 41.807 -0.388 24.580 0.35 12.80 ATOM 20 C20 RET E 301 38.077 -2.341 28.377 0.35 10.26 ATOM 21 C1 22B E 302 41.008 13.608 9.895 1.00 53.02 ATOM 22 C2 22B E 302 41.239 13.454 11.441 1.00 52.41 ATOM 23 C3 22B E 302 41.106 11.988 11.935 1.00 50.23 ATOM 24 C4 22B E 302 41.955 10.801 11.449 1.00 47.85 ATOM 25 C5 22B E 302 41.374 9.363 11.559 1.00 45.12 ATOM 26 C6 22B E 302 42.126 8.328 11.133 1.00 43.80 ATOM 27 C7 22B E 302 41.692 6.964 11.174 1.00 41.72 ATOM 28 C8 22B E 302 42.540 6.028 10.726 1.00 42.74 ATOM 29 C9 22B E 302 42.210 4.576 10.692 1.00 43.38 ATOM 30 C10 22B E 302 40.912 4.144 11.149 1.00 44.64 ATOM 31 C11 22B E 302 40.423 2.733 11.422 1.00 47.30 ATOM 32 C12 22B E 302 41.144 1.610 11.286 1.00 50.32 ATOM 33 C13 22B E 302 40.599 0.369 10.646 1.00 52.01 ATOM 34 C14 22B E 302 41.380 -0.733 10.556 1.00 54.29 ATOM 35 C15 22B E 302 42.382 -0.988 9.482 1.00 55.60 ATOM 36 C16 22B E 302 39.553 13.093 9.458 1.00 53.99 ATOM 37 C17 22B E 302 41.174 15.133 9.492 1.00 52.72 ATOM 38 C18 22B E 302 39.940 9.145 12.155 1.00 44.62 ATOM 39 C19 22B E 302 43.330 3.593 10.116 1.00 43.97 ATOM 40 C20 22B E 302 39.130 0.303 10.091 1.00 52.93 ATOM 41 C21 22B E 302 40.172 14.241 12.250 1.00 54.12 ATOM 42 C22 22B E 302 40.438 14.016 13.842 1.00 56.97 ATOM 43 C23 22B E 302 39.320 14.666 14.757 1.00 58.29 ATOM 44 C24 22B E 302 38.182 15.350 13.968 1.00 58.04 ATOM 45 C25 22B E 302 38.758 13.582 15.624 1.00 58.32 ATOM 46 O26 22B E 302 41.980 12.859 9.187 1.00 52.52 ATOM 47 O27 22B E 302 39.925 15.706 15.677 1.00 60.42 ATOM 48 C38 22B E 302 47.805 -5.739 8.041 1.00 65.53 ATOM 49 C39 22B E 302 46.829 -5.607 9.272 1.00 64.83 ATOM 50 C40 22B E 302 45.854 -4.594 9.325 1.00 64.64 ATOM 51 C41 22B E 302 45.686 -3.591 8.231 1.00 64.15 ATOM 52 C42 22B E 302 44.732 -2.622 8.311 1.00 62.82 ATOM 53 C43 22B E 302 44.515 -1.561 7.207 1.00 61.23 ATOM 54 C44 22B E 302 43.526 -0.541 7.268 1.00 59.31 ATOM 55 C45 22B E 302 42.505 -0.270 8.362 1.00 57.54 ATOM 56 C50 22B E 302 45.431 -1.578 5.916 1.00 61.11 ATOM 57 C26 22B E 302 46.962 -6.593 10.395 1.00 64.98 ATOM 58 C11 L3P E 303 28.746 -22.677 19.839 1.00 89.60 ATOM 59 C12 L3P E 303 28.191 -21.167 19.789 1.00 89.04 ATOM 60 C13 L3P E 303 27.425 -20.683 18.469 1.00 89.29 ATOM 61 C14 L3P E 303 28.366 -20.854 17.178 1.00 89.70 ATOM 62 C15 L3P E 303 26.957 -19.097 18.666 1.00 88.90 ATOM 63 C16 L3P E 303 26.018 -18.897 19.951 1.00 88.37 ATOM 64 C17 L3P E 303 25.997 -17.501 20.665 1.00 87.19 ATOM 65 C18 L3P E 303 26.920 -16.257 20.116 1.00 85.85 ATOM 66 C19 L3P E 303 28.465 -16.368 20.475 1.00 85.97 ATOM 67 C20 L3P E 303 26.349 -14.897 20.702 1.00 85.65 ATOM 68 C21 L3P E 303 26.697 -13.499 20.050 1.00 85.03 ATOM 69 C22 L3P E 303 25.851 -12.331 20.727 1.00 85.78 ATOM 70 C23 L3P E 303 26.133 -10.888 20.133 1.00 86.13 ATOM 71 C24 L3P E 303 27.615 -10.564 20.269 1.00 86.89 ATOM 72 C25 L3P E 303 25.224 -9.713 20.877 1.00 87.47 ATOM 73 C26 L3P E 303 25.266 -8.115 20.595 1.00 88.93 ATOM 74 C27 L3P E 303 24.255 -7.172 21.466 1.00 89.93 ATOM 75 C28 L3P E 303 24.673 -5.620 21.344 1.00 90.79 ATOM 76 C29 L3P E 303 23.889 -4.957 20.256 1.00 90.94 ATOM 77 C30 L3P E 303 24.377 -4.860 22.576 1.00 90.85 ATOM 78 C11 L3P E 304 21.818 -12.416 24.789 1.00 66.49 ATOM 79 C12 L3P E 304 22.274 -11.178 25.717 1.00 69.12 ATOM 80 C13 L3P E 304 21.683 -9.717 25.414 1.00 69.90 ATOM 81 C14 L3P E 304 22.030 -9.297 23.907 1.00 71.93 ATOM 82 C15 L3P E 304 22.312 -8.598 26.494 1.00 70.09 ATOM 83 C16 L3P E 304 22.015 -8.963 28.016 1.00 68.45 ATOM 84 C17 L3P E 304 22.604 -8.090 29.197 1.00 67.69 ATOM 85 C18 L3P E 304 23.544 -6.738 28.999 1.00 68.26 ATOM 86 C19 L3P E 304 25.125 -6.954 29.107 1.00 69.22 ATOM 87 C20 L3P E 304 23.070 -5.686 30.088 1.00 67.68 ATOM 88 C21 L3P E 304 23.774 -4.296 30.397 1.00 66.88 ATOM 89 C22 L3P E 304 22.989 -3.101 29.697 1.00 65.43 ATOM 90 C23 L3P E 304 23.598 -1.667 29.987 1.00 65.49 ATOM 91 C24 L3P E 304 23.534 -1.368 31.496 1.00 65.04 ATOM 92 C25 L3P E 304 22.802 -0.478 29.205 1.00 63.41 ATOM 93 C26 L3P E 304 23.514 0.814 28.606 1.00 64.42 ATOM 94 C27 L3P E 304 22.604 1.907 27.863 1.00 64.89 ATOM 95 C28 L3P E 304 23.527 3.118 27.402 1.00 63.91 ATOM 96 C29 L3P E 304 22.794 3.952 26.411 1.00 64.80 ATOM 97 C30 L3P E 304 23.875 4.001 28.525 1.00 64.56 ATOM 98 C1 BNG E 305 47.543 -20.107 10.887 1.00 45.88 ATOM 99 C2 BNG E 305 46.542 -21.297 11.173 1.00 43.72 ATOM 100 C3 BNG E 305 46.980 -22.525 10.279 1.00 42.53 ATOM 101 C4 BNG E 305 46.882 -22.088 8.784 1.00 43.61 ATOM 102 C5 BNG E 305 47.834 -20.861 8.520 1.00 44.07 ATOM 103 C6 BNG E 305 47.724 -20.373 7.067 1.00 43.30 ATOM 104 C1' BNG E 305 48.137 -17.831 11.459 1.00 55.21 ATOM 105 C2' BNG E 305 48.149 -16.900 12.677 1.00 57.10 ATOM 106 C3' BNG E 305 49.106 -15.722 12.468 1.00 60.79 ATOM 107 C4' BNG E 305 48.724 -14.552 13.361 1.00 62.63 ATOM 108 C5' BNG E 305 49.716 -13.395 13.313 1.00 65.43 ATOM 109 C6' BNG E 305 49.328 -12.338 14.342 1.00 66.44 ATOM 110 C7' BNG E 305 50.261 -11.138 14.361 1.00 68.12 ATOM 111 C8' BNG E 305 49.833 -10.139 15.430 1.00 68.84 ATOM 112 C9' BNG E 305 48.875 -9.102 14.881 1.00 69.29 ATOM 113 O1 BNG E 305 47.219 -18.951 11.680 1.00 47.11 ATOM 114 O2 BNG E 305 46.601 -21.660 12.538 1.00 39.21 ATOM 115 O3 BNG E 305 46.104 -23.606 10.522 1.00 34.64 ATOM 116 O4 BNG E 305 47.280 -23.163 7.921 1.00 43.04 ATOM 117 O5 BNG E 305 47.463 -19.759 9.426 1.00 44.27 ATOM 118 O6 BNG E 305 46.446 -19.827 6.821 1.00 37.76 ATOM 119 C1 BNG E 306 51.039 -21.292 14.429 1.00 74.39 ATOM 120 C2 BNG E 306 50.060 -22.536 14.464 1.00 73.12 ATOM 121 C3 BNG E 306 50.629 -23.663 13.535 1.00 73.62 ATOM 122 C4 BNG E 306 50.737 -23.098 12.079 1.00 73.87 ATOM 123 C5 BNG E 306 51.696 -21.849 12.050 1.00 74.51 ATOM 124 C6 BNG E 306 51.784 -21.272 10.624 1.00 74.21 ATOM 125 C1' BNG E 306 51.254 -19.008 15.387 1.00 74.15 ATOM 126 C2' BNG E 306 50.293 -17.908 15.842 1.00 73.29 ATOM 127 C3' BNG E 306 51.004 -16.575 15.969 1.00 73.64 ATOM 128 C4' BNG E 306 50.236 -15.601 16.841 1.00 72.99 ATOM 129 C5' BNG E 306 51.109 -14.416 17.202 1.00 73.76 ATOM 130 C6' BNG E 306 50.320 -13.345 17.921 1.00 74.33 ATOM 131 C7' BNG E 306 51.191 -12.161 18.282 1.00 75.10 ATOM 132 C8' BNG E 306 50.566 -11.348 19.399 1.00 74.98 ATOM 133 C9' BNG E 306 50.682 -9.867 19.114 1.00 74.80 ATOM 134 O1 BNG E 306 50.501 -20.239 15.291 1.00 73.91 ATOM 135 O2 BNG E 306 49.945 -23.003 15.803 1.00 73.35 ATOM 136 O3 BNG E 306 49.747 -24.786 13.550 1.00 70.71 ATOM 137 O4 BNG E 306 51.262 -24.091 11.209 1.00 74.04 ATOM 138 O5 BNG E 306 51.154 -20.826 12.990 1.00 74.34 ATOM 139 O6 BNG E 306 52.482 -20.034 10.621 1.00 74.57 ATOM 140 C1 BNG E 307 22.217 -22.002 43.662 1.00 61.18 ATOM 141 C2 BNG E 307 20.880 -22.801 43.991 1.00 60.52 ATOM 142 C3 BNG E 307 21.187 -24.340 44.009 1.00 60.29 ATOM 143 C4 BNG E 307 21.727 -24.749 42.594 1.00 59.42 ATOM 144 C5 BNG E 307 23.049 -23.937 42.278 1.00 57.75 ATOM 145 C6 BNG E 307 23.584 -24.302 40.889 1.00 57.54 ATOM 146 C1' BNG E 307 23.039 -19.671 43.365 1.00 63.55 ATOM 147 C2' BNG E 307 22.566 -18.261 43.712 1.00 66.43 ATOM 148 C3' BNG E 307 23.635 -17.206 43.454 1.00 68.92 ATOM 149 C4' BNG E 307 23.071 -16.052 42.631 1.00 70.51 ATOM 150 C5' BNG E 307 23.328 -14.706 43.287 1.00 72.35 ATOM 151 C6' BNG E 307 22.756 -13.569 42.449 1.00 73.13 ATOM 152 C7' BNG E 307 23.003 -12.207 43.089 1.00 74.19 ATOM 153 C8' BNG E 307 24.194 -11.508 42.453 1.00 74.25 ATOM 154 C9' BNG E 307 24.951 -10.703 43.488 1.00 75.43 ATOM 155 O1 BNG E 307 21.937 -20.573 43.636 1.00 61.14 ATOM 156 O2 BNG E 307 20.386 -22.376 45.262 1.00 59.46 ATOM 157 O3 BNG E 307 19.986 -25.059 44.298 1.00 59.68 ATOM 158 O4 BNG E 307 22.027 -26.150 42.558 1.00 57.20 ATOM 159 O5 BNG E 307 22.735 -22.488 42.337 1.00 58.59 ATOM 160 O6 BNG E 307 22.591 -24.126 39.877 1.00 54.54 ATOM 161 C11 L3P E 303 25.609 -11.455 16.574 1.00 85.17 ATOM 162 C12 L3P E 303 27.052 -10.758 16.345 1.00 84.79 ATOM 163 C13 L3P E 303 27.594 -10.669 14.848 1.00 84.67 ATOM 164 C14 L3P E 303 27.649 -12.150 14.247 1.00 84.92 ATOM 165 C15 L3P E 303 29.105 -9.920 14.807 1.00 83.62 ATOM 166 C16 L3P E 303 29.088 -8.425 15.405 1.00 82.91 ATOM 167 C17 L3P E 303 29.581 -7.100 14.637 1.00 82.26 ATOM 168 C18 L3P E 303 30.207 -6.912 13.091 1.00 81.33 ATOM 169 C19 L3P E 303 30.805 -8.204 12.374 1.00 81.62 ATOM 170 C20 L3P E 303 31.356 -5.791 13.160 1.00 80.51 ATOM 171 C21 L3P E 303 31.305 -4.347 12.465 1.00 79.50 ATOM 172 C22 L3P E 303 31.148 -3.187 13.573 1.00 79.22 ATOM 173 C23 L3P E 303 31.108 -1.672 13.063 1.00 78.14 ATOM 174 C24 L3P E 303 32.415 -1.317 12.343 1.00 78.12 ATOM 175 C25 L3P E 303 30.892 -0.586 14.301 1.00 76.84 ATOM 176 C26 L3P E 303 30.688 1.007 14.107 1.00 76.48 ATOM 177 C27 L3P E 303 30.467 1.945 15.407 1.00 76.13 ATOM 178 C28 L3P E 303 29.589 3.224 14.994 1.00 76.31 ATOM 179 C29 L3P E 303 28.898 3.784 16.185 1.00 76.27 ATOM 180 C30 L3P E 303 30.409 4.319 14.454 1.00 75.79 ATOM 181 C1 BNG E 304 43.159 -21.458 5.086 1.00 27.55 ATOM 182 C2 BNG E 304 43.932 -22.474 5.970 1.00 25.36 ATOM 183 C3 BNG E 304 43.575 -23.933 5.527 1.00 27.61 ATOM 184 C4 BNG E 304 42.051 -24.122 5.683 1.00 27.37 ATOM 185 C5 BNG E 304 41.313 -23.039 4.758 1.00 26.98 ATOM 186 C6 BNG E 304 39.800 -23.108 4.859 1.00 24.86 ATOM 187 C1' BNG E 304 42.813 -19.064 4.706 1.00 29.07 ATOM 188 C2' BNG E 304 43.283 -17.740 5.313 1.00 33.02 ATOM 189 C3' BNG E 304 42.717 -16.506 4.628 1.00 36.53 ATOM 190 C4' BNG E 304 43.048 -15.310 5.496 1.00 37.20 ATOM 191 C5' BNG E 304 41.997 -14.239 5.462 1.00 42.74 ATOM 192 C6' BNG E 304 42.555 -12.961 6.051 1.00 39.01 ATOM 193 C7' BNG E 304 41.538 -11.854 6.022 1.00 40.92 ATOM 194 C8' BNG E 304 42.126 -10.578 5.463 1.00 39.24 ATOM 195 C9' BNG E 304 41.041 -9.805 4.784 1.00 37.92 ATOM 196 O1 BNG E 304 43.456 -20.117 5.497 1.00 27.01 ATOM 197 O2 BNG E 304 45.334 -22.238 5.800 1.00 25.65 ATOM 198 O3 BNG E 304 44.276 -24.848 6.366 1.00 27.27 ATOM 199 O4 BNG E 304 41.719 -25.450 5.269 1.00 28.01 ATOM 200 O5 BNG E 304 41.715 -21.692 5.198 1.00 28.23 ATOM 201 O6 BNG E 304 39.355 -23.080 6.215 1.00 24.22 ATOM 202 C1 BNG E 304 21.115 11.372 39.718 1.00 45.44 ATOM 203 C2 BNG E 304 21.795 12.675 40.308 1.00 45.36 ATOM 204 C3 BNG E 304 20.688 13.596 40.936 1.00 44.88 ATOM 205 C4 BNG E 304 19.692 13.994 39.812 1.00 43.60 ATOM 206 C5 BNG E 304 19.029 12.687 39.193 1.00 40.52 ATOM 207 C6 BNG E 304 18.061 13.060 38.039 1.00 36.89 ATOM 208 C1' BNG E 304 21.713 9.223 38.620 1.00 46.76 ATOM 209 C2' BNG E 304 21.947 8.217 39.776 1.00 48.89 ATOM 210 C3' BNG E 304 21.564 6.796 39.425 1.00 51.15 ATOM 211 C4' BNG E 304 21.877 5.823 40.543 1.00 51.46 ATOM 212 C5' BNG E 304 21.000 4.570 40.491 1.00 52.00 ATOM 213 C6' BNG E 304 21.625 3.472 39.639 1.00 53.56 ATOM 214 C7' BNG E 304 20.767 2.222 39.583 1.00 53.28 ATOM 215 C8' BNG E 304 21.251 1.267 38.511 1.00 52.29 ATOM 216 C9' BNG E 304 21.625 -0.061 39.109 1.00 52.76 ATOM 217 O1 BNG E 304 22.144 10.520 39.143 1.00 43.12 ATOM 218 O2 BNG E 304 22.720 12.280 41.320 1.00 48.38 ATOM 219 O3 BNG E 304 21.283 14.778 41.465 1.00 43.82 ATOM 220 O4 BNG E 304 18.669 14.851 40.364 1.00 41.88 ATOM 221 O5 BNG E 304 20.114 11.813 38.665 1.00 40.06 ATOM 222 O6 BNG E 304 18.654 14.021 37.142 1.00 27.91 TER