HEADER Ribosome 27-AUG-15 5DGF TITLE Complex of yeast 80S ribosome with hypusine-containing/non-modified TITLE 2 eIF5A and/or a peptidyl-tRNA analog COMPND MOL_ID: 77; COMPND 2 MOLECULE: 60S ribosomal protein L41-A; COMPND 3 CHAIN: Q1, q1; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 3.30 ANGSTORMS DBREF 5DGF Q 1 25 UNP P0CX86 RL41A_YEAST 1 25 SEQRES 1 Q1 25 MET ARG ALA LYS TRP ARG LYS LYS ARG THR ARG ARG LEU SEQRES 2 Q1 25 LYS ARG LYS ARG ARG LYS VAL ARG ALA ARG SER LYS ATOM 1 N MET Q 1 -48.009 -4.278 77.908 1.00 74.48 ATOM 2 CA MET Q 1 -47.233 -4.790 79.026 1.00 74.03 ATOM 3 C MET Q 1 -47.700 -4.161 80.324 1.00 73.73 ATOM 4 O MET Q 1 -48.148 -3.016 80.321 1.00 73.34 ATOM 5 CB MET Q 1 -45.756 -4.515 78.806 1.00 73.14 ATOM 6 CG MET Q 1 -45.465 -3.082 78.422 1.00 72.58 ATOM 7 SD MET Q 1 -43.693 -2.764 78.382 1.00 71.81 ATOM 8 CE MET Q 1 -43.196 -3.525 79.926 1.00 71.87 ATOM 9 N ARG Q 2 -47.589 -4.913 81.420 1.00 73.63 ATOM 10 CA ARG Q 2 -48.078 -4.487 82.736 1.00 73.48 ATOM 11 C ARG Q 2 -47.696 -3.039 83.055 1.00 72.49 ATOM 12 O ARG Q 2 -46.602 -2.588 82.735 1.00 71.77 ATOM 13 CB ARG Q 2 -47.559 -5.444 83.828 1.00 73.69 ATOM 14 CG ARG Q 2 -47.453 -4.859 85.252 1.00 73.25 ATOM 15 CD ARG Q 2 -48.376 -5.558 86.257 1.00 73.99 ATOM 16 NE ARG Q 2 -47.703 -6.577 87.067 1.00 74.25 ATOM 17 CZ ARG Q 2 -47.612 -6.545 88.396 1.00 74.27 ATOM 18 NH1 ARG Q 2 -48.147 -5.540 89.069 1.00 74.01 ATOM 19 NH2 ARG Q 2 -46.992 -7.516 89.057 1.00 74.57 ATOM 20 N ALA Q 3 -48.624 -2.313 83.665 1.00 73.70 ATOM 21 CA ALA Q 3 -48.468 -0.882 83.891 1.00 72.89 ATOM 22 C ALA Q 3 -47.188 -0.498 84.643 1.00 72.19 ATOM 23 O ALA Q 3 -46.598 0.542 84.352 1.00 71.59 ATOM 24 CB ALA Q 3 -49.686 -0.347 84.630 1.00 73.20 ATOM 25 N LYS Q 4 -46.754 -1.321 85.595 1.00 72.10 ATOM 26 CA LYS Q 4 -45.557 -0.994 86.371 1.00 71.56 ATOM 27 C LYS Q 4 -44.273 -1.441 85.681 1.00 71.27 ATOM 28 O LYS Q 4 -43.233 -0.824 85.878 1.00 70.90 ATOM 29 CB LYS Q 4 -45.619 -1.606 87.770 1.00 71.58 ATOM 30 CG LYS Q 4 -45.138 -3.042 87.857 1.00 71.60 ATOM 31 CD LYS Q 4 -44.621 -3.373 89.248 1.00 71.50 ATOM 32 CE LYS Q 4 -45.703 -3.262 90.291 1.00 71.63 ATOM 33 NZ LYS Q 4 -45.157 -3.504 91.643 1.00 71.56 ATOM 34 N TRP Q 5 -44.339 -2.507 84.881 1.00 72.07 ATOM 35 CA TRP Q 5 -43.189 -2.913 84.078 1.00 71.82 ATOM 36 C TRP Q 5 -42.880 -1.867 83.011 1.00 71.62 ATOM 37 O TRP Q 5 -41.749 -1.787 82.538 1.00 71.25 ATOM 38 CB TRP Q 5 -43.401 -4.262 83.383 1.00 72.21 ATOM 39 CG TRP Q 5 -43.677 -5.469 84.229 1.00 72.48 ATOM 40 CD1 TRP Q 5 -44.399 -6.557 83.849 1.00 73.00 ATOM 41 CD2 TRP Q 5 -43.227 -5.739 85.562 1.00 72.27 ATOM 42 NE1 TRP Q 5 -44.443 -7.481 84.857 1.00 73.14 ATOM 43 CE2 TRP Q 5 -43.728 -7.005 85.921 1.00 72.69 ATOM 44 CE3 TRP Q 5 -42.452 -5.040 86.487 1.00 71.83 ATOM 45 CZ2 TRP Q 5 -43.485 -7.581 87.159 1.00 72.65 ATOM 46 CZ3 TRP Q 5 -42.212 -5.619 87.719 1.00 71.81 ATOM 47 CH2 TRP Q 5 -42.731 -6.872 88.044 1.00 72.22 ATOM 48 N ARG Q 6 -43.883 -1.091 82.607 1.00 71.56 ATOM 49 CA ARG Q 6 -43.628 0.013 81.690 1.00 71.39 ATOM 50 C ARG Q 6 -43.226 1.243 82.495 1.00 70.97 ATOM 51 O ARG Q 6 -42.573 2.146 81.975 1.00 70.64 ATOM 52 CB ARG Q 6 -44.837 0.326 80.801 1.00 71.85 ATOM 53 CG ARG Q 6 -44.488 1.256 79.626 1.00 71.71 ATOM 54 CD ARG Q 6 -45.647 2.179 79.200 1.00 72.02 ATOM 55 NE ARG Q 6 -45.171 3.450 78.638 1.00 72.02 ATOM 56 CZ ARG Q 6 -44.807 3.630 77.366 1.00 71.66 ATOM 57 NH1 ARG Q 6 -44.863 2.615 76.503 1.00 71.24 ATOM 58 NH2 ARG Q 6 -44.380 4.826 76.950 1.00 71.73 ATOM 59 N LYS Q 7 -43.606 1.277 83.768 1.00 71.50 ATOM 60 CA LYS Q 7 -43.112 2.327 84.649 1.00 70.85 ATOM 61 C LYS Q 7 -41.613 2.144 84.812 1.00 70.39 ATOM 62 O LYS Q 7 -40.836 3.050 84.526 1.00 69.71 ATOM 63 CB LYS Q 7 -43.807 2.305 86.008 1.00 71.17 ATOM 64 CG LYS Q 7 -43.428 3.480 86.907 1.00 70.61 ATOM 65 CD LYS Q 7 -44.458 3.691 88.019 1.00 71.01 ATOM 66 CE LYS Q 7 -44.010 4.741 89.035 1.00 70.53 ATOM 67 NZ LYS Q 7 -45.013 4.916 90.127 1.00 70.97 ATOM 68 N LYS Q 8 -41.208 0.956 85.249 1.00 70.16 ATOM 69 CA LYS Q 8 -39.791 0.614 85.328 1.00 69.88 ATOM 70 C LYS Q 8 -39.095 0.753 83.976 1.00 69.48 ATOM 71 O LYS Q 8 -37.892 0.990 83.916 1.00 68.88 ATOM 72 CB LYS Q 8 -39.614 -0.810 85.856 1.00 70.57 ATOM 73 CG LYS Q 8 -38.188 -1.310 85.841 1.00 70.40 ATOM 74 CD LYS Q 8 -38.128 -2.787 86.131 1.00 71.18 ATOM 75 CE LYS Q 8 -38.596 -3.095 87.526 1.00 71.60 ATOM 76 NZ LYS Q 8 -38.237 -4.486 87.873 1.00 71.93 ATOM 77 N ARG Q 9 -39.849 0.613 82.890 1.00 69.76 ATOM 78 CA ARG Q 9 -39.264 0.731 81.561 1.00 69.50 ATOM 79 C ARG Q 9 -38.826 2.163 81.310 1.00 68.62 ATOM 80 O ARG Q 9 -37.638 2.425 81.116 1.00 68.17 ATOM 81 CB ARG Q 9 -40.247 0.283 80.484 1.00 70.01 ATOM 82 CG ARG Q 9 -39.642 0.075 79.102 1.00 70.06 ATOM 83 CD ARG Q 9 -40.733 0.216 78.046 1.00 70.21 ATOM 84 NE ARG Q 9 -40.503 -0.542 76.817 1.00 71.00 ATOM 85 CZ ARG Q 9 -40.548 -1.869 76.727 1.00 71.60 ATOM 86 NH1 ARG Q 9 -40.775 -2.611 77.801 1.00 71.55 ATOM 87 NH2 ARG Q 9 -40.347 -2.459 75.559 1.00 72.32 ATOM 88 N THR Q 10 -39.775 3.095 81.339 1.00 68.30 ATOM 89 CA THR Q 10 -39.448 4.487 81.048 1.00 67.55 ATOM 90 C THR Q 10 -38.756 5.128 82.245 1.00 67.05 ATOM 91 O THR Q 10 -38.393 6.298 82.208 1.00 66.42 ATOM 92 CB THR Q 10 -40.696 5.315 80.651 1.00 67.59 ATOM 93 OG1 THR Q 10 -41.400 5.739 81.822 1.00 67.58 ATOM 94 CG2 THR Q 10 -41.626 4.502 79.731 1.00 68.33 ATOM 95 N ARG Q 11 -38.576 4.347 83.306 1.00 67.43 ATOM 96 CA ARG Q 11 -37.743 4.752 84.430 1.00 67.07 ATOM 97 C ARG Q 11 -36.282 4.585 84.044 1.00 66.75 ATOM 98 O ARG Q 11 -35.456 5.447 84.309 1.00 66.18 ATOM 99 CB ARG Q 11 -38.051 3.921 85.679 1.00 67.59 ATOM 100 CG ARG Q 11 -38.408 4.719 86.916 1.00 67.50 ATOM 101 CD ARG Q 11 -39.900 4.711 87.113 1.00 68.03 ATOM 102 NE ARG Q 11 -40.342 5.424 88.309 1.00 68.01 ATOM 103 CZ ARG Q 11 -40.669 4.841 89.460 1.00 68.41 ATOM 104 NH1 ARG Q 11 -40.594 3.526 89.590 1.00 68.84 ATOM 105 NH2 ARG Q 11 -41.075 5.575 90.486 1.00 68.41 ATOM 106 N ARG Q 12 -35.973 3.457 83.419 1.00 66.61 ATOM 107 CA ARG Q 12 -34.603 3.140 83.040 1.00 66.47 ATOM 108 C ARG Q 12 -34.103 4.059 81.936 1.00 65.84 ATOM 109 O ARG Q 12 -33.047 4.681 82.057 1.00 65.33 ATOM 110 CB ARG Q 12 -34.495 1.690 82.573 1.00 67.13 ATOM 111 CG ARG Q 12 -34.706 0.644 83.633 1.00 67.78 ATOM 112 CD ARG Q 12 -34.628 -0.710 82.988 1.00 68.43 ATOM 113 NE ARG Q 12 -35.013 -1.782 83.888 1.00 69.16 ATOM 114 CZ ARG Q 12 -35.346 -2.998 83.477 1.00 69.88 ATOM 115 NH1 ARG Q 12 -35.344 -3.273 82.180 1.00 69.93 ATOM 116 NH2 ARG Q 12 -35.685 -3.933 84.357 1.00 70.57 ATOM 117 N LEU Q 13 -34.866 4.107 80.849 1.00 66.86 ATOM 118 CA LEU Q 13 -34.560 4.958 79.713 1.00 66.32 ATOM 119 C LEU Q 13 -34.295 6.394 80.171 1.00 65.63 ATOM 120 O LEU Q 13 -33.305 7.003 79.770 1.00 65.10 ATOM 121 CB LEU Q 13 -35.709 4.885 78.700 1.00 66.64 ATOM 122 CG LEU Q 13 -35.924 5.893 77.565 1.00 66.23 ATOM 123 CD1 LEU Q 13 -36.676 7.108 78.071 1.00 65.87 ATOM 124 CD2 LEU Q 13 -34.621 6.294 76.871 1.00 65.71 ATOM 125 N LYS Q 14 -35.183 6.924 81.011 1.00 66.12 ATOM 126 CA LYS Q 14 -34.990 8.242 81.606 1.00 65.96 ATOM 127 C LYS Q 14 -33.626 8.316 82.279 1.00 65.65 ATOM 128 O LYS Q 14 -32.858 9.241 82.051 1.00 65.38 ATOM 129 CB LYS Q 14 -36.094 8.559 82.630 1.00 66.25 ATOM 130 CG LYS Q 14 -37.176 9.525 82.144 1.00 66.65 ATOM 131 CD LYS Q 14 -37.839 10.287 83.296 1.00 66.77 ATOM 132 CE LYS Q 14 -38.403 9.343 84.342 1.00 66.97 ATOM 133 NZ LYS Q 14 -39.348 10.017 85.285 1.00 67.06 ATOM 134 N ARG Q 15 -33.334 7.319 83.104 1.00 66.52 ATOM 135 CA ARG Q 15 -32.096 7.276 83.863 1.00 66.31 ATOM 136 C ARG Q 15 -30.894 7.048 82.945 1.00 66.01 ATOM 137 O ARG Q 15 -29.770 7.453 83.263 1.00 65.75 ATOM 138 CB ARG Q 15 -32.182 6.181 84.928 1.00 66.50 ATOM 139 CG ARG Q 15 -30.906 5.940 85.699 1.00 66.38 ATOM 140 CD ARG Q 15 -31.017 4.684 86.538 1.00 66.59 ATOM 141 NE ARG Q 15 -31.277 3.509 85.714 1.00 66.87 ATOM 142 CZ ARG Q 15 -31.819 2.382 86.168 1.00 67.03 ATOM 143 NH1 ARG Q 15 -32.170 2.273 87.445 1.00 66.91 ATOM 144 NH2 ARG Q 15 -32.018 1.363 85.340 1.00 67.33 ATOM 145 N LYS Q 16 -31.135 6.410 81.798 1.00 66.08 ATOM 146 CA LYS Q 16 -30.046 6.088 80.873 1.00 65.84 ATOM 147 C LYS Q 16 -29.620 7.308 80.074 1.00 65.57 ATOM 148 O LYS Q 16 -28.433 7.584 79.957 1.00 65.29 ATOM 149 CB LYS Q 16 -30.432 4.951 79.918 1.00 66.01 ATOM 150 CG LYS Q 16 -29.258 4.481 79.070 1.00 65.94 ATOM 151 CD LYS Q 16 -29.510 3.148 78.376 1.00 65.83 ATOM 152 CE LYS Q 16 -28.192 2.536 77.873 1.00 65.75 ATOM 153 NZ LYS Q 16 -27.310 3.503 77.128 1.00 65.44 ATOM 154 N ARG Q 17 -30.572 8.049 79.525 1.00 64.97 ATOM 155 CA ARG Q 17 -30.193 9.247 78.804 1.00 64.72 ATOM 156 C ARG Q 17 -30.032 10.388 79.785 1.00 64.61 ATOM 157 O ARG Q 17 -29.680 11.493 79.398 1.00 64.34 ATOM 158 CB ARG Q 17 -31.203 9.590 77.705 1.00 64.90 ATOM 159 CG ARG Q 17 -32.619 9.883 78.163 1.00 65.28 ATOM 160 CD ARG Q 17 -33.580 9.891 76.970 1.00 65.40 ATOM 161 NE ARG Q 17 -34.945 10.237 77.359 1.00 65.80 ATOM 162 CZ ARG Q 17 -36.030 9.925 76.656 1.00 66.14 ATOM 163 NH1 ARG Q 17 -35.931 9.230 75.529 1.00 66.16 ATOM 164 NH2 ARG Q 17 -37.225 10.281 77.099 1.00 66.53 ATOM 165 N ARG Q 18 -30.294 10.118 81.059 1.00 65.42 ATOM 166 CA ARG Q 18 -29.826 11.008 82.114 1.00 65.36 ATOM 167 C ARG Q 18 -28.319 11.050 81.953 1.00 65.04 ATOM 168 O ARG Q 18 -27.737 12.105 81.703 1.00 64.82 ATOM 169 CB ARG Q 18 -30.216 10.518 83.522 1.00 65.63 ATOM 170 CG ARG Q 18 -31.270 11.366 84.252 1.00 65.76 ATOM 171 CD ARG Q 18 -31.477 10.939 85.727 1.00 66.04 ATOM 172 NE ARG Q 18 -32.506 9.903 85.905 1.00 66.31 ATOM 173 CZ ARG Q 18 -33.015 9.523 87.084 1.00 66.53 ATOM 174 NH1 ARG Q 18 -32.603 10.097 88.215 1.00 66.51 ATOM 175 NH2 ARG Q 18 -33.947 8.568 87.135 1.00 66.77 ATOM 176 N LYS Q 19 -27.705 9.875 82.056 1.00 63.50 ATOM 177 CA LYS Q 19 -26.263 9.719 81.903 1.00 63.27 ATOM 178 C LYS Q 19 -25.742 10.275 80.581 1.00 62.97 ATOM 179 O LYS Q 19 -24.741 10.986 80.554 1.00 62.74 ATOM 180 CB LYS Q 19 -25.883 8.243 82.029 1.00 63.39 ATOM 181 CG LYS Q 19 -24.487 7.901 81.550 1.00 63.41 ATOM 182 CD LYS Q 19 -24.471 6.518 80.910 1.00 63.77 ATOM 183 CE LYS Q 19 -24.504 5.401 81.945 1.00 63.71 ATOM 184 NZ LYS Q 19 -23.150 5.158 82.528 1.00 63.90 ATOM 185 N VAL Q 20 -26.426 9.960 79.487 1.00 62.45 ATOM 186 CA VAL Q 20 -25.947 10.344 78.165 1.00 62.09 ATOM 187 C VAL Q 20 -25.879 11.860 78.009 1.00 61.84 ATOM 188 O VAL Q 20 -25.023 12.382 77.295 1.00 61.51 ATOM 189 CB VAL Q 20 -26.828 9.751 77.078 1.00 62.24 ATOM 190 CG1 VAL Q 20 -26.282 10.093 75.717 1.00 61.92 ATOM 191 CG2 VAL Q 20 -26.888 8.253 77.244 1.00 62.89 ATOM 192 N ARG Q 21 -26.767 12.566 78.701 1.00 63.28 ATOM 193 CA ARG Q 21 -26.723 14.025 78.705 1.00 62.80 ATOM 194 C ARG Q 21 -25.490 14.506 79.457 1.00 62.59 ATOM 195 O ARG Q 21 -24.954 15.581 79.174 1.00 62.14 ATOM 196 CB ARG Q 21 -27.992 14.627 79.326 1.00 62.96 ATOM 197 CG ARG Q 21 -29.023 15.067 78.298 1.00 62.68 ATOM 198 CD ARG Q 21 -29.947 16.167 78.818 1.00 62.84 ATOM 199 NE ARG Q 21 -29.362 17.502 78.693 1.00 62.43 ATOM 200 CZ ARG Q 21 -29.977 18.632 79.041 1.00 62.70 ATOM 201 NH1 ARG Q 21 -29.357 19.800 78.899 1.00 62.56 ATOM 202 NH2 ARG Q 21 -31.207 18.598 79.536 1.00 63.16 ATOM 203 N ALA Q 22 -25.035 13.703 80.412 1.00 62.70 ATOM 204 CA ALA Q 22 -23.897 14.092 81.226 1.00 62.60 ATOM 205 C ALA Q 22 -22.600 14.057 80.419 1.00 62.37 ATOM 206 O ALA Q 22 -21.631 14.747 80.763 1.00 62.15 ATOM 207 CB ALA Q 22 -23.793 13.201 82.443 1.00 63.11 ATOM 208 N ARG Q 23 -22.594 13.261 79.345 1.00 62.07 ATOM 209 CA ARG Q 23 -21.454 13.187 78.428 1.00 61.73 ATOM 210 C ARG Q 23 -21.040 14.587 77.994 1.00 61.34 ATOM 211 O ARG Q 23 -19.859 14.864 77.792 1.00 61.02 ATOM 212 CB ARG Q 23 -21.781 12.330 77.200 1.00 61.77 ATOM 213 CG ARG Q 23 -21.982 10.846 77.496 1.00 62.02 ATOM 214 CD ARG Q 23 -21.789 9.998 76.241 1.00 62.01 ATOM 215 NE ARG Q 23 -20.818 8.923 76.456 1.00 62.19 ATOM 216 CZ ARG Q 23 -19.518 9.010 76.173 1.00 61.99 ATOM 217 NH1 ARG Q 23 -18.712 7.983 76.408 1.00 62.25 ATOM 218 NH2 ARG Q 23 -19.019 10.122 75.654 1.00 61.54 ATOM 219 N SER Q 24 -22.029 15.466 77.858 1.00 62.93 ATOM 220 CA SER Q 24 -21.783 16.889 77.673 1.00 62.63 ATOM 221 C SER Q 24 -21.765 17.612 79.030 1.00 62.78 ATOM 222 O SER Q 24 -20.715 18.077 79.485 1.00 62.67 ATOM 223 CB SER Q 24 -22.845 17.497 76.752 1.00 62.64 ATOM 224 OG SER Q 24 -22.738 18.910 76.715 1.00 62.41 ATOM 225 N LYS Q 25 -22.934 17.671 79.667 1.00 63.19 ATOM 226 CA LYS Q 25 -23.146 18.394 80.920 1.00 63.46 ATOM 227 C LYS Q 25 -22.418 19.739 80.946 1.00 63.15 ATOM 228 O LYS Q 25 -22.920 20.719 81.501 1.00 62.90 ATOM 229 CB LYS Q 25 -22.714 17.545 82.117 1.00 63.61 ATOM 230 CG LYS Q 25 -23.219 18.090 83.450 1.00 64.11 ATOM 231 CD LYS Q 25 -22.616 17.355 84.638 1.00 64.26 ATOM 232 CE LYS Q 25 -22.965 15.871 84.627 1.00 64.33 ATOM 233 NZ LYS Q 25 -22.199 15.093 85.650 1.00 64.53 TER