HEADER TRANSCRIPTION 31-DEC-69 5FYW TITLE Transcription initiation complex structures elucidate DNA opening COMPND MOL_ID: 21; COMPND 2 MOLECULE: TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT ALPHA; COMPND 3 CHAIN: W; COMPND 4 ENGINEERED: YES; EXPDTA ELECTRON MICROSCOPY REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP W 112 REMARK 465 LEU W 113 REMARK 465 ASP W 114 REMARK 465 LYS W 115 REMARK 465 ASN W 116 REMARK 465 SER W 117 REMARK 465 GLU W 118 REMARK 465 PRO W 119 REMARK 465 ASN W 120 REMARK 465 ASP W 159 REMARK 465 ASP W 160 REMARK 465 SER W 161 REMARK 465 GLY W 162 REMARK 465 LYS W 163 REMARK 465 LYS W 164 REMARK 465 ASN W 165 REMARK 465 LYS W 166 REMARK 465 GLU W 167 DBREF 5FYW W 1 482 UNP P36100 T2EA_YEAST 1 482 SEQRES 1 W 70 TRP LYS VAL HIS GLN VAL VAL GLN ARG LEU LYS ASP ASP SEQRES 2 W 70 LEU ASP LYS ASN SER GLU PRO ASN GLY TYR MET CYS PRO SEQRES 3 W 70 ILE CYS LEU THR LYS TYR THR GLN LEU GLU ALA VAL GLN SEQRES 4 W 70 LEU LEU ASN PHE ASP ARG THR GLU PHE LEU CYS SER LEU SEQRES 5 W 70 CYS ASP GLU PRO LEU VAL GLU ASP ASP SER GLY LYS LYS SEQRES 6 W 70 ASN LYS GLU LYS GLN ATOM 1 N TRP W 100 195.532 192.358 255.852 1.00253.04 ATOM 2 CA TRP W 100 194.853 192.911 254.684 1.00253.04 ATOM 3 C TRP W 100 193.678 192.036 254.273 1.00253.04 ATOM 4 O TRP W 100 192.616 192.544 253.896 1.00253.04 ATOM 5 CB TRP W 100 195.839 193.071 253.530 1.00223.47 ATOM 6 N LYS W 101 193.842 190.716 254.367 1.00267.63 ATOM 7 CA LYS W 101 192.777 189.802 253.973 1.00267.63 ATOM 8 C LYS W 101 191.597 189.879 254.935 1.00267.63 ATOM 9 O LYS W 101 190.445 189.952 254.509 1.00267.63 ATOM 10 CB LYS W 101 193.323 188.378 253.898 1.00254.82 ATOM 11 N VAL W 102 191.871 189.890 256.242 1.00275.18 ATOM 12 CA VAL W 102 190.790 189.912 257.227 1.00275.18 ATOM 13 C VAL W 102 190.038 191.234 257.168 1.00275.18 ATOM 14 O VAL W 102 188.802 191.270 257.214 1.00275.18 ATOM 15 CB VAL W 102 191.346 189.642 258.638 1.00242.09 ATOM 16 N HIS W 103 190.773 192.343 257.041 1.00288.93 ATOM 17 CA HIS W 103 190.107 193.638 256.934 1.00288.93 ATOM 18 C HIS W 103 189.303 193.727 255.645 1.00288.93 ATOM 19 O HIS W 103 188.171 194.228 255.640 1.00288.93 ATOM 20 CB HIS W 103 191.135 194.769 257.010 1.00274.14 ATOM 21 N GLN W 104 189.859 193.213 254.545 1.00283.50 ATOM 22 CA GLN W 104 189.139 193.219 253.274 1.00283.50 ATOM 23 C GLN W 104 187.913 192.323 253.338 1.00283.50 ATOM 24 O GLN W 104 186.875 192.632 252.739 1.00283.50 ATOM 25 CB GLN W 104 190.070 192.787 252.141 1.00276.31 ATOM 26 N VAL W 105 188.016 191.209 254.062 1.00279.39 ATOM 27 CA VAL W 105 186.893 190.296 254.243 1.00279.39 ATOM 28 C VAL W 105 185.783 190.981 255.007 1.00279.39 ATOM 29 O VAL W 105 184.599 190.849 254.676 1.00279.39 ATOM 30 CB VAL W 105 187.355 189.037 254.988 1.00273.95 ATOM 31 N VAL W 106 186.153 191.718 256.057 1.00287.21 ATOM 32 CA VAL W 106 185.159 192.435 256.842 1.00287.21 ATOM 33 C VAL W 106 184.506 193.511 255.994 1.00287.21 ATOM 34 O VAL W 106 183.294 193.751 256.093 1.00287.21 ATOM 35 CB VAL W 106 185.800 193.021 258.114 1.00289.10 ATOM 36 N GLN W 107 185.288 194.163 255.133 1.00286.35 ATOM 37 CA GLN W 107 184.718 195.170 254.247 1.00286.35 ATOM 38 C GLN W 107 183.743 194.537 253.262 1.00286.35 ATOM 39 O GLN W 107 182.682 195.104 252.979 1.00286.35 ATOM 40 CB GLN W 107 185.830 195.908 253.501 1.00281.94 ATOM 41 N ARG W 108 184.071 193.346 252.759 1.00281.53 ATOM 42 CA ARG W 108 183.170 192.656 251.847 1.00281.53 ATOM 43 C ARG W 108 181.890 192.238 252.556 1.00281.53 ATOM 44 O ARG W 108 180.795 192.328 251.987 1.00281.53 ATOM 45 CB ARG W 108 183.866 191.441 251.233 1.00271.65 ATOM 46 N LEU W 109 182.004 191.790 253.810 1.00278.73 ATOM 47 CA LEU W 109 180.815 191.425 254.569 1.00278.73 ATOM 48 C LEU W 109 179.947 192.645 254.835 1.00278.73 ATOM 49 O LEU W 109 178.714 192.561 254.791 1.00278.73 ATOM 50 CB LEU W 109 181.217 190.751 255.882 1.00272.92 ATOM 51 N LYS W 110 180.575 193.793 255.093 1.00280.89 ATOM 52 CA LYS W 110 179.816 195.016 255.324 1.00280.89 ATOM 53 C LYS W 110 179.099 195.467 254.057 1.00280.89 ATOM 54 O LYS W 110 177.974 195.974 254.119 1.00280.89 ATOM 55 CB LYS W 110 180.739 196.119 255.840 1.00283.13 ATOM 56 N ASP W 111 179.730 195.285 252.902 1.00289.54 ATOM 57 CA ASP W 111 179.136 195.693 251.633 1.00289.54 ATOM 58 C ASP W 111 177.885 194.879 251.317 1.00289.54 ATOM 59 O ASP W 111 177.677 193.799 251.879 1.00289.54 ATOM 60 CB ASP W 111 180.153 195.554 250.496 1.00293.18 ATOM 61 N GLY W 121 168.288 196.013 242.901 1.00159.31 ATOM 62 CA GLY W 121 168.800 195.160 241.849 1.00159.31 ATOM 63 C GLY W 121 167.749 194.762 240.832 1.00159.31 ATOM 64 O GLY W 121 166.645 194.352 241.194 1.00159.31 ATOM 65 N TYR W 122 168.093 194.887 239.553 1.00175.23 ATOM 66 CA TYR W 122 167.168 194.610 238.464 1.00175.23 ATOM 67 C TYR W 122 167.918 193.956 237.316 1.00175.23 ATOM 68 O TYR W 122 169.027 194.374 236.971 1.00175.23 ATOM 69 CB TYR W 122 166.473 195.891 237.980 1.00175.90 ATOM 70 N MET W 123 167.311 192.928 236.727 1.00175.66 ATOM 71 CA MET W 123 167.864 192.278 235.548 1.00175.66 ATOM 72 C MET W 123 166.726 191.789 234.664 1.00175.66 ATOM 73 O MET W 123 165.706 191.313 235.163 1.00175.66 ATOM 74 CB MET W 123 168.779 191.108 235.931 1.00168.68 ATOM 75 N CYS W 124 166.918 191.916 233.322 1.00174.78 ATOM 76 CA CYS W 124 165.938 191.453 232.353 1.00174.78 ATOM 77 C CYS W 124 166.283 190.051 231.870 1.00174.78 ATOM 78 O CYS W 124 167.445 189.775 231.546 1.00174.78 ATOM 79 CB CYS W 124 165.866 192.398 231.154 1.00182.75 ATOM 80 N PRO W 125 165.300 189.148 231.826 1.00177.06 ATOM 81 CA PRO W 125 165.612 187.758 231.438 1.00177.06 ATOM 82 C PRO W 125 166.147 187.620 230.022 1.00177.06 ATOM 83 O PRO W 125 167.157 186.936 229.808 1.00177.06 ATOM 84 CB PRO W 125 164.267 187.043 231.620 1.00168.60 ATOM 85 N ILE W 126 165.500 188.255 229.043 1.00177.25 ATOM 86 CA ILE W 126 165.913 188.085 227.653 1.00177.25 ATOM 87 C ILE W 126 167.106 188.974 227.326 1.00177.25 ATOM 88 O ILE W 126 168.042 188.546 226.644 1.00177.25 ATOM 89 CB ILE W 126 164.728 188.358 226.711 1.00166.92 ATOM 90 N CYS W 127 167.091 190.222 227.800 1.00182.43 ATOM 91 CA CYS W 127 168.181 191.141 227.493 1.00182.43 ATOM 92 C CYS W 127 169.452 190.794 228.260 1.00182.43 ATOM 93 O CYS W 127 170.553 191.110 227.799 1.00182.43 ATOM 94 CB CYS W 127 167.758 192.579 227.797 1.00204.24 ATOM 95 N LEU W 128 169.316 190.161 229.427 1.00177.55 ATOM 96 CA LEU W 128 170.431 189.850 230.324 1.00177.55 ATOM 97 C LEU W 128 171.163 191.106 230.786 1.00177.55 ATOM 98 O LEU W 128 172.340 191.039 231.160 1.00177.55 ATOM 99 CB LEU W 128 171.416 188.867 229.678 1.00169.21 ATOM 100 N THR W 129 170.486 192.249 230.766 1.00168.53 ATOM 101 CA THR W 129 171.058 193.498 231.240 1.00168.53 ATOM 102 C THR W 129 170.961 193.581 232.762 1.00168.53 ATOM 103 O THR W 129 170.437 192.687 233.433 1.00168.53 ATOM 104 CB THR W 129 170.357 194.687 230.584 1.00160.94 ATOM 105 N LYS W 130 171.474 194.674 233.318 1.00171.78 ATOM 106 CA LYS W 130 171.498 194.883 234.759 1.00171.78 ATOM 107 C LYS W 130 171.224 196.349 235.058 1.00171.78 ATOM 108 O LYS W 130 171.723 197.235 234.361 1.00171.78 ATOM 109 CB LYS W 130 172.845 194.463 235.363 1.00176.96 ATOM 110 N TYR W 131 170.430 196.594 236.097 1.00178.49 ATOM 111 CA TYR W 131 169.991 197.937 236.444 1.00178.49 ATOM 112 C TYR W 131 170.159 198.145 237.942 1.00178.49 ATOM 113 O TYR W 131 170.378 197.201 238.705 1.00178.49 ATOM 114 CB TYR W 131 168.537 198.179 236.023 1.00170.10 ATOM 115 N THR W 132 170.052 199.404 238.359 1.00190.88 ATOM 116 CA THR W 132 170.269 199.786 239.748 1.00190.88 ATOM 117 C THR W 132 169.128 200.705 240.178 1.00190.88 ATOM 118 O THR W 132 168.162 200.921 239.437 1.00190.88 ATOM 119 CB THR W 132 171.641 200.451 239.925 1.00183.47 ATOM 120 N GLN W 133 169.241 201.247 241.395 1.00200.60 ATOM 121 CA GLN W 133 168.193 202.116 241.929 1.00200.60 ATOM 122 C GLN W 133 168.024 203.392 241.100 1.00200.60 ATOM 123 O GLN W 133 166.889 203.817 240.802 1.00200.60 ATOM 124 CB GLN W 133 168.498 202.464 243.385 1.00191.82 ATOM 125 N LEU W 134 169.135 204.018 240.697 1.00216.19 ATOM 126 CA LEU W 134 169.009 205.216 239.866 1.00216.19 ATOM 127 C LEU W 134 168.371 204.866 238.525 1.00216.19 ATOM 128 O LEU W 134 167.476 205.585 238.019 1.00216.19 ATOM 129 CB LEU W 134 170.373 205.869 239.661 1.00223.19 ATOM 130 N GLU W 135 168.772 203.730 237.974 1.00213.99 ATOM 131 CA GLU W 135 168.129 203.184 236.800 1.00213.99 ATOM 132 C GLU W 135 166.673 202.849 237.063 1.00213.99 ATOM 133 O GLU W 135 165.899 202.753 236.109 1.00213.99 ATOM 134 CB GLU W 135 168.872 201.937 236.315 1.00200.27 ATOM 135 N ALA W 136 166.289 202.614 238.320 1.00217.59 ATOM 136 CA ALA W 136 164.886 202.353 238.600 1.00217.59 ATOM 137 C ALA W 136 164.057 203.595 238.318 1.00217.59 ATOM 138 O ALA W 136 163.041 203.528 237.615 1.00217.59 ATOM 139 CB ALA W 136 164.699 201.881 240.046 1.00213.94 ATOM 140 N VAL W 137 164.530 204.758 238.781 1.00224.26 ATOM 141 CA VAL W 137 163.777 205.983 238.494 1.00224.26 ATOM 142 C VAL W 137 163.644 206.183 236.988 1.00224.26 ATOM 143 O VAL W 137 162.589 206.606 236.486 1.00224.26 ATOM 144 CB VAL W 137 164.446 207.194 239.168 1.00238.04 ATOM 145 N GLN W 138 164.699 205.847 236.232 1.00217.42 ATOM 146 CA GLN W 138 164.598 205.996 234.776 1.00217.42 ATOM 147 C GLN W 138 163.643 204.971 234.146 1.00217.42 ATOM 148 O GLN W 138 162.854 205.307 233.253 1.00217.42 ATOM 149 CB GLN W 138 165.986 205.889 234.145 1.00213.46 ATOM 150 N LEU W 139 163.710 203.715 234.592 1.00219.01 ATOM 151 CA LEU W 139 162.982 202.608 233.970 1.00219.01 ATOM 152 C LEU W 139 161.496 202.582 234.295 1.00219.01 ATOM 153 O LEU W 139 160.762 201.789 233.692 1.00219.01 ATOM 154 CB LEU W 139 163.610 201.276 234.383 1.00211.88 ATOM 155 N LEU W 140 161.039 203.414 235.227 1.00226.90 ATOM 156 CA LEU W 140 159.632 203.413 235.608 1.00226.90 ATOM 157 C LEU W 140 158.771 203.959 234.474 1.00226.90 ATOM 158 O LEU W 140 159.106 204.980 233.863 1.00226.90 ATOM 159 CB LEU W 140 159.427 204.240 236.876 1.00229.73 ATOM 160 N ASN W 141 157.668 203.279 234.195 1.00226.31 ATOM 161 CA ASN W 141 156.693 203.715 233.204 1.00226.31 ATOM 162 C ASN W 141 155.383 204.062 233.893 1.00226.31 ATOM 163 O ASN W 141 154.992 203.417 234.870 1.00226.31 ATOM 164 CB ASN W 141 156.463 202.634 232.145 1.00214.80 ATOM 165 N PHE W 142 154.709 205.097 233.386 1.00227.67 ATOM 166 CA PHE W 142 153.426 205.501 233.950 1.00227.67 ATOM 167 C PHE W 142 152.268 204.654 233.433 1.00227.67 ATOM 168 O PHE W 142 151.288 204.455 234.158 1.00227.67 ATOM 169 CB PHE W 142 153.164 206.976 233.651 1.00219.87 ATOM 170 N ASP W 143 152.353 204.165 232.193 1.00235.76 ATOM 171 CA ASP W 143 151.251 203.410 231.608 1.00235.76 ATOM 172 C ASP W 143 150.949 202.149 232.414 1.00235.76 ATOM 173 O ASP W 143 149.837 201.966 232.919 1.00235.76 ATOM 174 CB ASP W 143 151.573 203.060 230.153 1.00231.54 ATOM 175 N ARG W 144 151.938 201.267 232.540 1.00232.89 ATOM 176 CA ARG W 144 151.838 200.122 233.429 1.00232.89 ATOM 177 C ARG W 144 152.483 200.453 234.773 1.00232.89 ATOM 178 O ARG W 144 152.978 201.560 234.999 1.00232.89 ATOM 179 CB ARG W 144 152.483 198.893 232.790 1.00222.72 ATOM 180 N THR W 145 152.470 199.488 235.686 1.00230.17 ATOM 181 CA THR W 145 153.254 199.561 236.916 1.00230.17 ATOM 182 C THR W 145 154.300 198.451 236.859 1.00230.17 ATOM 183 O THR W 145 153.979 197.275 237.062 1.00230.17 ATOM 184 CB THR W 145 152.364 199.428 238.149 1.00231.93 ATOM 185 N GLU W 146 155.554 198.840 236.622 1.00220.41 ATOM 186 CA GLU W 146 156.657 197.905 236.420 1.00220.41 ATOM 187 C GLU W 146 157.942 198.654 236.086 1.00220.41 ATOM 188 O GLU W 146 157.903 199.834 235.714 1.00220.41 ATOM 189 CB GLU W 146 156.341 196.912 235.299 1.00224.05 ATOM 190 N PHE W 147 159.079 197.979 236.213 1.00206.27 ATOM 191 CA PHE W 147 160.350 198.476 235.703 1.00206.27 ATOM 192 C PHE W 147 160.620 197.818 234.356 1.00206.27 ATOM 193 O PHE W 147 160.756 196.593 234.276 1.00206.27 ATOM 194 CB PHE W 147 161.485 198.185 236.684 1.00198.42 ATOM 195 N LEU W 148 160.691 198.626 233.304 1.00215.58 ATOM 196 CA LEU W 148 160.870 198.127 231.951 1.00215.58 ATOM 197 C LEU W 148 162.318 198.282 231.504 1.00215.58 ATOM 198 O LEU W 148 163.003 199.242 231.864 1.00215.58 ATOM 199 CB LEU W 148 159.944 198.857 230.974 1.00207.25 ATOM 200 N CYS W 149 162.779 197.314 230.712 1.00218.53 ATOM 201 CA CYS W 149 164.121 197.377 230.152 1.00218.53 ATOM 202 C CYS W 149 164.235 198.535 229.163 1.00218.53 ATOM 203 O CYS W 149 163.239 199.034 228.630 1.00218.53 ATOM 204 CB CYS W 149 164.476 196.058 229.466 1.00213.55 ATOM 205 N SER W 150 165.471 198.959 228.925 1.00214.91 ATOM 206 CA SER W 150 165.720 200.114 228.066 1.00214.91 ATOM 207 C SER W 150 165.519 199.767 226.594 1.00214.91 ATOM 208 O SER W 150 164.581 200.260 225.959 1.00214.91 ATOM 209 CB SER W 150 167.134 200.652 228.295 1.00201.34 ATOM 210 N LEU W 151 166.393 198.922 226.048 1.00202.62 ATOM 211 CA LEU W 151 166.338 198.613 224.623 1.00202.62 ATOM 212 C LEU W 151 165.226 197.619 224.298 1.00202.62 ATOM 213 O LEU W 151 164.456 197.827 223.355 1.00202.62 ATOM 214 CB LEU W 151 167.690 198.073 224.153 1.00181.57 ATOM 215 N CYS W 152 165.126 196.534 225.068 1.00202.75 ATOM 216 CA CYS W 152 164.185 195.467 224.765 1.00202.75 ATOM 217 C CYS W 152 162.821 195.656 225.412 1.00202.75 ATOM 218 O CYS W 152 161.879 194.950 225.043 1.00202.75 ATOM 219 CB CYS W 152 164.766 194.115 225.196 1.00201.59 ATOM 220 N ASP W 153 162.692 196.592 226.357 1.00208.50 ATOM 221 CA ASP W 153 161.431 196.849 227.057 1.00208.50 ATOM 222 C ASP W 153 160.862 195.570 227.672 1.00208.50 ATOM 223 O ASP W 153 159.651 195.341 227.675 1.00208.50 ATOM 224 CB ASP W 153 160.409 197.506 226.124 1.00209.00 ATOM 225 N GLU W 154 161.750 194.736 228.200 1.00199.29 ATOM 226 CA GLU W 154 161.367 193.496 228.855 1.00199.29 ATOM 227 C GLU W 154 161.073 193.737 230.329 1.00199.29 ATOM 228 O GLU W 154 161.484 194.752 230.900 1.00199.29 ATOM 229 CB GLU W 154 162.476 192.459 228.704 1.00186.22 ATOM 230 N PRO W 155 160.353 192.820 230.972 1.00182.66 ATOM 231 CA PRO W 155 160.206 192.892 232.431 1.00182.66 ATOM 232 C PRO W 155 161.552 192.781 233.136 1.00182.66 ATOM 233 O PRO W 155 162.544 192.309 232.578 1.00182.66 ATOM 234 CB PRO W 155 159.305 191.696 232.757 1.00174.47 ATOM 235 N LEU W 156 161.567 193.227 234.391 1.00183.46 ATOM 236 CA LEU W 156 162.784 193.293 235.188 1.00183.46 ATOM 237 C LEU W 156 162.605 192.472 236.456 1.00183.46 ATOM 238 O LEU W 156 161.595 192.618 237.155 1.00183.46 ATOM 239 CB LEU W 156 163.136 194.741 235.539 1.00178.69 ATOM 240 N VAL W 157 163.578 191.614 236.746 1.00177.59 ATOM 241 CA VAL W 157 163.538 190.767 237.933 1.00177.59 ATOM 242 C VAL W 157 164.867 190.870 238.668 1.00177.59 ATOM 243 O VAL W 157 165.739 191.659 238.286 1.00177.59 ATOM 244 CB VAL W 157 163.222 189.305 237.566 1.00175.84 ATOM 245 N GLU W 158 165.030 190.079 239.722 1.00176.30 ATOM 246 CA GLU W 158 166.253 190.105 240.516 1.00176.30 ATOM 247 C GLU W 158 166.964 188.754 240.476 1.00176.30 ATOM 248 O GLU W 158 166.559 187.849 239.748 1.00176.30 ATOM 249 CB GLU W 158 165.941 190.491 241.964 1.00167.47 ATOM 250 N LYS W 168 171.746 186.781 255.107 1.00284.12 ATOM 251 CA LYS W 168 173.001 186.958 254.389 1.00284.12 ATOM 252 C LYS W 168 174.037 187.658 255.262 1.00284.12 ATOM 253 O LYS W 168 175.150 187.164 255.440 1.00284.12 ATOM 254 CB LYS W 168 172.774 187.751 253.101 1.00277.58 ATOM 255 N GLN W 169 173.662 188.819 255.804 1.00280.15 ATOM 256 CA GLN W 169 174.576 189.565 256.661 1.00280.15 ATOM 257 C GLN W 169 174.794 188.845 257.987 1.00280.15 ATOM 258 O GLN W 169 175.911 188.819 258.517 1.00280.15 ATOM 259 CB GLN W 169 174.045 190.977 256.897 1.00264.26 ATOM 260 ZN ZN W1192 166.733 193.672 228.548 1.00 57.38 TER