HEADER TRANSCRIPTION 31-DEC-69 5JBH TITLE Cryo-EM structure of a full archaeal ribosomal translation initiation TITLE 2 complex in the P-IN conformation COMPND MOL_ID: 29; COMPND 2 MOLECULE: 30S ribosomal protein eL41; COMPND 3 30S ribosomal protein eL41 model from Pyrococcus furiosus (PDB code COMPND 4 OTHER_DETAILS: 4V6U) used for fitting; EXPDTA ELECTRON MICROSCOPY DBREF 5JBH 0 1 22 PDB 5JBH 5JBH 1 22 SEQRES 1 0 22 MET ARG TRP LYS TRP ILE LYS LYS ARG ILE ARG ARG LEU SEQRES 2 0 22 LYS ARG GLN ARG LYS LYS GLU ARG GLY ATOM 1 N MET 0 1 182.177 207.548 173.417 1.00 40.00 ATOM 2 CA MET 0 1 183.237 208.018 172.482 1.00 40.00 ATOM 3 C MET 0 1 182.663 208.641 171.177 1.00 40.00 ATOM 4 O MET 0 1 182.553 209.839 171.113 1.00 40.00 ATOM 5 CB MET 0 1 184.286 206.916 172.201 1.00 40.00 ATOM 6 CG MET 0 1 185.165 206.491 173.379 1.00 40.00 ATOM 7 SD MET 0 1 186.342 207.774 173.870 1.00 40.00 ATOM 8 CE MET 0 1 187.846 207.332 173.015 1.00 40.00 ATOM 9 N ARG 0 2 182.253 207.871 170.160 1.00 40.00 ATOM 10 CA ARG 0 2 182.104 208.415 168.783 1.00 40.00 ATOM 11 C ARG 0 2 180.962 209.436 168.737 1.00 40.00 ATOM 12 O ARG 0 2 181.009 210.344 167.923 1.00 40.00 ATOM 13 CB ARG 0 2 182.025 207.323 167.655 1.00 40.00 ATOM 14 CG ARG 0 2 183.232 206.317 167.590 1.00 40.00 ATOM 15 CD ARG 0 2 183.087 204.993 166.764 1.00 40.00 ATOM 16 NE ARG 0 2 184.333 204.145 166.685 1.00 40.00 ATOM 17 CZ ARG 0 2 184.418 202.902 166.170 1.00 40.00 ATOM 18 NH1 ARG 0 2 183.352 202.282 165.645 1.00 40.00 ATOM 19 NH2 ARG 0 2 185.602 202.269 166.166 1.00 40.00 ATOM 20 N TRP 0 3 179.993 209.321 169.657 1.00 40.00 ATOM 21 CA TRP 0 3 179.061 210.406 169.982 1.00 40.00 ATOM 22 C TRP 0 3 179.792 211.659 170.225 1.00 40.00 ATOM 23 O TRP 0 3 179.504 212.696 169.627 1.00 40.00 ATOM 24 CB TRP 0 3 178.314 210.158 171.304 1.00 40.00 ATOM 25 CG TRP 0 3 177.336 209.212 171.169 1.00 40.00 ATOM 26 CD1 TRP 0 3 177.234 208.034 171.815 1.00 40.00 ATOM 27 CD2 TRP 0 3 176.273 209.285 170.266 1.00 40.00 ATOM 28 NE1 TRP 0 3 176.137 207.361 171.385 1.00 40.00 ATOM 29 CE2 TRP 0 3 175.528 208.105 170.408 1.00 40.00 ATOM 30 CE3 TRP 0 3 175.875 210.243 169.339 1.00 40.00 ATOM 31 CZ2 TRP 0 3 174.394 207.851 169.657 1.00 40.00 ATOM 32 CZ3 TRP 0 3 174.789 210.006 168.599 1.00 40.00 ATOM 33 CH2 TRP 0 3 174.033 208.804 168.751 1.00 40.00 ATOM 34 N LYS 0 4 180.724 211.533 171.167 1.00 40.00 ATOM 35 CA LYS 0 4 181.514 212.656 171.667 1.00 40.00 ATOM 36 C LYS 0 4 182.029 213.325 170.454 1.00 40.00 ATOM 37 O LYS 0 4 181.725 214.475 170.163 1.00 40.00 ATOM 38 CB LYS 0 4 182.789 212.249 172.452 1.00 40.00 ATOM 39 CG LYS 0 4 182.681 211.306 173.619 1.00 40.00 ATOM 40 CD LYS 0 4 184.081 210.956 174.087 1.00 40.00 ATOM 41 CE LYS 0 4 184.029 210.003 175.244 1.00 40.00 ATOM 42 NZ LYS 0 4 185.279 209.227 175.282 1.00 40.00 ATOM 43 N TRP 0 5 182.777 212.517 169.720 1.00 40.00 ATOM 44 CA TRP 0 5 183.722 213.010 168.787 1.00 40.00 ATOM 45 C TRP 0 5 182.928 213.646 167.687 1.00 40.00 ATOM 46 O TRP 0 5 183.240 214.750 167.272 1.00 40.00 ATOM 47 CB TRP 0 5 184.636 211.871 168.325 1.00 40.00 ATOM 48 CG TRP 0 5 185.658 211.498 169.404 1.00 40.00 ATOM 49 CD1 TRP 0 5 185.475 210.671 170.494 1.00 40.00 ATOM 50 CD2 TRP 0 5 187.007 211.970 169.494 1.00 40.00 ATOM 51 NE1 TRP 0 5 186.623 210.602 171.260 1.00 40.00 ATOM 52 CE2 TRP 0 5 187.589 211.376 170.653 1.00 40.00 ATOM 53 CE3 TRP 0 5 187.790 212.832 168.703 1.00 40.00 ATOM 54 CZ2 TRP 0 5 188.920 211.632 171.033 1.00 40.00 ATOM 55 CZ3 TRP 0 5 189.115 213.080 169.080 1.00 40.00 ATOM 56 CH2 TRP 0 5 189.663 212.482 170.235 1.00 40.00 ATOM 57 N ILE 0 6 181.828 213.010 167.297 1.00 40.00 ATOM 58 CA ILE 0 6 181.041 213.517 166.186 1.00 40.00 ATOM 59 C ILE 0 6 180.517 214.918 166.460 1.00 40.00 ATOM 60 O ILE 0 6 180.560 215.774 165.591 1.00 40.00 ATOM 61 CB ILE 0 6 179.902 212.553 165.845 1.00 40.00 ATOM 62 CG1 ILE 0 6 180.495 211.280 165.216 1.00 40.00 ATOM 63 CG2 ILE 0 6 178.915 213.211 164.886 1.00 40.00 ATOM 64 CD1 ILE 0 6 179.647 210.037 165.382 1.00 40.00 ATOM 65 N LYS 0 7 180.058 215.144 167.675 1.00 40.00 ATOM 66 CA LYS 0 7 179.587 216.457 168.061 1.00 40.00 ATOM 67 C LYS 0 7 180.676 217.426 168.349 1.00 40.00 ATOM 68 O LYS 0 7 180.480 218.610 168.163 1.00 40.00 ATOM 69 CB LYS 0 7 178.762 216.348 169.288 1.00 40.00 ATOM 70 CG LYS 0 7 177.534 215.602 168.944 1.00 40.00 ATOM 71 CD LYS 0 7 176.864 215.225 170.193 1.00 40.00 ATOM 72 CE LYS 0 7 175.675 214.424 169.791 1.00 40.00 ATOM 73 NZ LYS 0 7 174.987 214.165 171.040 1.00 40.00 ATOM 74 N LYS 0 8 181.797 216.945 168.862 1.00 40.00 ATOM 75 CA LYS 0 8 182.959 217.801 169.011 1.00 40.00 ATOM 76 C LYS 0 8 183.408 218.251 167.625 1.00 40.00 ATOM 77 O LYS 0 8 183.675 219.432 167.416 1.00 40.00 ATOM 78 CB LYS 0 8 184.090 217.084 169.736 1.00 40.00 ATOM 79 CG LYS 0 8 183.867 216.941 171.227 1.00 40.00 ATOM 80 CD LYS 0 8 185.047 216.215 171.824 1.00 40.00 ATOM 81 CE LYS 0 8 184.875 215.960 173.307 1.00 40.00 ATOM 82 NZ LYS 0 8 185.976 215.092 173.813 1.00 40.00 ATOM 83 N ARG 0 9 183.439 217.315 166.679 1.00 40.00 ATOM 84 CA ARG 0 9 183.901 217.585 165.326 1.00 40.00 ATOM 85 C ARG 0 9 182.918 218.536 164.681 1.00 40.00 ATOM 86 O ARG 0 9 183.308 219.530 164.104 1.00 40.00 ATOM 87 CB ARG 0 9 184.015 216.284 164.514 1.00 40.00 ATOM 88 CG ARG 0 9 185.159 215.338 164.940 1.00 40.00 ATOM 89 CD ARG 0 9 184.975 213.894 164.395 1.00 40.00 ATOM 90 NE ARG 0 9 185.900 212.849 164.930 1.00 40.00 ATOM 91 CZ ARG 0 9 185.775 211.508 164.755 1.00 40.00 ATOM 92 NH1 ARG 0 9 184.754 210.962 164.061 1.00 40.00 ATOM 93 NH2 ARG 0 9 186.692 210.668 165.277 1.00 40.00 ATOM 94 N ILE 0 10 181.638 218.239 164.836 1.00 40.00 ATOM 95 CA ILE 0 10 180.579 219.118 164.369 1.00 40.00 ATOM 96 C ILE 0 10 180.656 220.540 164.980 1.00 40.00 ATOM 97 O ILE 0 10 180.550 221.522 164.250 1.00 40.00 ATOM 98 CB ILE 0 10 179.204 218.449 164.591 1.00 40.00 ATOM 99 CG1 ILE 0 10 179.022 217.297 163.591 1.00 40.00 ATOM 100 CG2 ILE 0 10 178.070 219.447 164.416 1.00 40.00 ATOM 101 CD1 ILE 0 10 177.969 216.296 164.002 1.00 40.00 ATOM 102 N ARG 0 11 180.848 220.645 166.296 1.00 40.00 ATOM 103 CA ARG 0 11 180.941 221.946 166.980 1.00 40.00 ATOM 104 C ARG 0 11 182.155 222.716 166.511 1.00 40.00 ATOM 105 O ARG 0 11 182.051 223.896 166.212 1.00 40.00 ATOM 106 CB ARG 0 11 181.019 221.783 168.493 1.00 40.00 ATOM 107 CG ARG 0 11 179.682 221.501 169.134 1.00 40.00 ATOM 108 CD ARG 0 11 179.888 221.138 170.584 1.00 40.00 ATOM 109 NE ARG 0 11 178.619 220.920 171.268 1.00 40.00 ATOM 110 CZ ARG 0 11 178.502 220.566 172.562 1.00 40.00 ATOM 111 NH1 ARG 0 11 179.581 220.368 173.357 1.00 40.00 ATOM 112 NH2 ARG 0 11 177.279 220.402 173.076 1.00 40.00 ATOM 113 N ARG 0 12 183.301 222.035 166.465 1.00 40.00 ATOM 114 CA ARG 0 12 184.535 222.595 165.889 1.00 40.00 ATOM 115 C ARG 0 12 184.227 223.122 164.484 1.00 40.00 ATOM 116 O ARG 0 12 184.501 224.291 164.181 1.00 40.00 ATOM 117 CB ARG 0 12 185.679 221.546 165.833 1.00 40.00 ATOM 118 CG ARG 0 12 186.451 221.298 167.144 1.00 40.00 ATOM 119 CD ARG 0 12 187.564 220.232 166.986 1.00 40.00 ATOM 120 NE ARG 0 12 188.435 220.037 168.181 1.00 40.00 ATOM 121 CZ ARG 0 12 189.396 219.093 168.320 1.00 40.00 ATOM 122 NH1 ARG 0 12 189.650 218.210 167.336 1.00 40.00 ATOM 123 NH2 ARG 0 12 190.132 219.023 169.460 1.00 40.00 ATOM 124 N LEU 0 13 183.605 222.269 163.667 1.00 40.00 ATOM 125 CA LEU 0 13 183.291 222.599 162.289 1.00 40.00 ATOM 126 C LEU 0 13 182.397 223.819 162.260 1.00 40.00 ATOM 127 O LEU 0 13 182.796 224.837 161.735 1.00 40.00 ATOM 128 CB LEU 0 13 182.642 221.417 161.574 1.00 40.00 ATOM 129 CG LEU 0 13 183.604 220.246 161.334 1.00 40.00 ATOM 130 CD1 LEU 0 13 182.836 218.967 161.036 1.00 40.00 ATOM 131 CD2 LEU 0 13 184.611 220.551 160.238 1.00 40.00 ATOM 132 N LYS 0 14 181.235 223.741 162.892 1.00 40.00 ATOM 133 CA LYS 0 14 180.312 224.870 162.937 1.00 40.00 ATOM 134 C LYS 0 14 180.951 226.149 163.418 1.00 40.00 ATOM 135 O LYS 0 14 180.986 227.119 162.677 1.00 40.00 ATOM 136 CB LYS 0 14 179.137 224.563 163.838 1.00 40.00 ATOM 137 CG LYS 0 14 178.151 223.660 163.169 1.00 40.00 ATOM 138 CD LYS 0 14 176.895 223.569 164.000 1.00 40.00 ATOM 139 CE LYS 0 14 175.849 222.846 163.202 1.00 40.00 ATOM 140 NZ LYS 0 14 174.471 223.072 163.725 1.00 40.00 ATOM 141 N ARG 0 15 181.471 226.133 164.642 1.00 40.00 ATOM 142 CA ARG 0 15 182.074 227.316 165.270 1.00 40.00 ATOM 143 C ARG 0 15 183.119 227.898 164.339 1.00 40.00 ATOM 144 O ARG 0 15 183.095 229.097 164.035 1.00 40.00 ATOM 145 CB ARG 0 15 182.710 226.983 166.636 1.00 40.00 ATOM 146 CG ARG 0 15 181.713 226.677 167.761 1.00 40.00 ATOM 147 CD ARG 0 15 182.379 226.247 169.085 1.00 40.00 ATOM 148 NE ARG 0 15 181.409 226.055 170.194 1.00 40.00 ATOM 149 CZ ARG 0 15 181.705 225.774 171.478 1.00 40.00 ATOM 150 NH1 ARG 0 15 182.974 225.604 171.894 1.00 40.00 ATOM 151 NH2 ARG 0 15 180.709 225.657 172.376 1.00 40.00 ATOM 152 N GLN 0 16 184.013 227.037 163.852 1.00 40.00 ATOM 153 CA GLN 0 16 185.017 227.490 162.888 1.00 40.00 ATOM 154 C GLN 0 16 184.363 227.914 161.577 1.00 40.00 ATOM 155 O GLN 0 16 184.726 228.952 161.010 1.00 40.00 ATOM 156 CB GLN 0 16 186.101 226.438 162.665 1.00 40.00 ATOM 157 CG GLN 0 16 186.947 226.253 163.907 1.00 40.00 ATOM 158 CD GLN 0 16 188.045 225.247 163.729 1.00 40.00 ATOM 159 OE1 GLN 0 16 188.185 224.631 162.665 1.00 40.00 ATOM 160 NE2 GLN 0 16 188.846 225.085 164.769 1.00 40.00 ATOM 161 N ARG 0 17 183.359 227.163 161.128 1.00 40.00 ATOM 162 CA ARG 0 17 182.686 227.493 159.876 1.00 40.00 ATOM 163 C ARG 0 17 181.864 228.749 160.060 1.00 40.00 ATOM 164 O ARG 0 17 181.732 229.532 159.133 1.00 40.00 ATOM 165 CB ARG 0 17 181.900 226.300 159.318 1.00 40.00 ATOM 166 CG ARG 0 17 182.871 225.262 158.744 1.00 40.00 ATOM 167 CD ARG 0 17 182.282 223.927 158.291 1.00 40.00 ATOM 168 NE ARG 0 17 183.313 223.092 157.616 1.00 40.00 ATOM 169 CZ ARG 0 17 183.077 222.124 156.702 1.00 40.00 ATOM 170 NH1 ARG 0 17 181.827 221.818 156.310 1.00 40.00 ATOM 171 NH2 ARG 0 17 184.111 221.463 156.145 1.00 40.00 ATOM 172 N LYS 0 18 181.402 228.982 161.279 1.00 40.00 ATOM 173 CA LYS 0 18 180.867 230.276 161.658 1.00 40.00 ATOM 174 C LYS 0 18 181.946 231.352 161.527 1.00 40.00 ATOM 175 O LYS 0 18 181.701 232.393 160.925 1.00 40.00 ATOM 176 CB LYS 0 18 180.292 230.250 163.079 1.00 40.00 ATOM 177 CG LYS 0 18 178.954 229.537 163.188 1.00 40.00 ATOM 178 CD LYS 0 18 178.499 229.391 164.636 1.00 40.00 ATOM 179 CE LYS 0 18 177.177 228.627 164.731 1.00 40.00 ATOM 180 NZ LYS 0 18 176.531 228.659 166.082 1.00 40.00 ATOM 181 N LYS 0 19 183.141 231.094 162.059 1.00 40.00 ATOM 182 CA LYS 0 19 184.256 232.063 161.945 1.00 40.00 ATOM 183 C LYS 0 19 184.728 232.326 160.490 1.00 40.00 ATOM 184 O LYS 0 19 185.287 233.391 160.205 1.00 40.00 ATOM 185 CB LYS 0 19 185.441 231.655 162.854 1.00 40.00 ATOM 186 CG LYS 0 19 185.162 231.754 164.367 1.00 40.00 ATOM 187 CD LYS 0 19 186.312 231.237 165.256 1.00 40.00 ATOM 188 CE LYS 0 19 185.984 231.247 166.761 1.00 40.00 ATOM 189 NZ LYS 0 19 187.108 230.891 167.702 1.00 40.00 ATOM 190 N GLU 0 20 184.498 231.362 159.591 1.00 40.00 ATOM 191 CA GLU 0 20 184.806 231.493 158.135 1.00 40.00 ATOM 192 C GLU 0 20 183.715 232.217 157.370 1.00 40.00 ATOM 193 O GLU 0 20 183.987 233.100 156.544 1.00 40.00 ATOM 194 CB GLU 0 20 184.963 230.126 157.459 1.00 40.00 ATOM 195 CG GLU 0 20 186.247 229.382 157.789 1.00 40.00 ATOM 196 CD GLU 0 20 186.569 228.276 156.786 1.00 40.00 ATOM 197 OE1 GLU 0 20 186.535 228.558 155.535 1.00 40.00 ATOM 198 OE2 GLU 0 20 186.872 227.136 157.253 1.00 40.00 ATOM 199 N ARG 0 21 182.483 231.772 157.625 1.00 40.00 ATOM 200 CA ARG 0 21 181.265 232.436 157.159 1.00 40.00 ATOM 201 C ARG 0 21 181.271 233.896 157.617 1.00 40.00 ATOM 202 O ARG 0 21 180.677 234.751 156.957 1.00 40.00 ATOM 203 CB ARG 0 21 180.009 231.727 157.702 1.00 40.00 ATOM 204 CG ARG 0 21 179.729 230.331 157.133 1.00 40.00 ATOM 205 CD ARG 0 21 178.811 229.508 158.053 1.00 40.00 ATOM 206 NE ARG 0 21 178.772 228.071 157.729 1.00 40.00 ATOM 207 CZ ARG 0 21 177.939 227.166 158.283 1.00 40.00 ATOM 208 NH1 ARG 0 21 177.049 227.504 159.235 1.00 40.00 ATOM 209 NH2 ARG 0 21 177.996 225.887 157.891 1.00 40.00 ATOM 210 N GLY 0 22 181.929 234.150 158.757 1.00 40.00 ATOM 211 CA GLY 0 22 182.192 235.495 159.272 1.00 40.00 ATOM 212 C GLY 0 22 183.670 235.856 159.211 1.00 40.00 ATOM 213 O GLY 0 22 184.388 236.014 160.312 1.00 40.00 TER