HEADER OXIDOREDUCTASE 31-DEC-69 5JC1 TITLE Structure of Plasmodium falciparum DXR in complex with a TITLE 2 beta-substituted fosmidomycin analogue, LC55 and manganese COMPND MOL_ID: 1; COMPND 2 MOLECULE: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, COMPND 3 apicoplastic; COMPND 4 CHAIN: A, B; COMPND 5 EC: 1.1.1.267; COMPND 6 UNP residues ; COMPND 7 ENGINEERED: YES; COMPND 8 MATURE PROTEIN LACKS SIGNAL AND APICOPLAST TARGETING SEQUENCES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 1.65 ANGSTORMS DBREF 5JC1 A 75 488 UNP Q8IKG4 DXR_PLAF7 75 488 SEQRES 1 A 30 SER GLU ASN SER GLU ASP LEU MET LYS GLN ILE LEU GLN SEQRES 2 A 30 ILE HIS SER TRP ALA LYS ASP LYS ALA THR ASP ILE TYR SEQRES 3 A 30 ASN LYS HIS ASN ATOM 1 N SER A 457 24.688 34.215 30.562 1.00 22.09 ATOM 2 CA SER A 457 26.140 34.004 30.462 1.00 23.76 ATOM 3 C SER A 457 26.609 33.951 29.000 1.00 25.13 ATOM 4 O SER A 457 26.014 33.245 28.176 1.00 23.02 ATOM 5 CB SER A 457 26.566 32.703 31.150 1.00 24.23 ATOM 6 OG SER A 457 26.226 32.681 32.529 1.00 25.21 ATOM 7 N GLU A 458 27.661 34.713 28.693 1.00 27.08 ATOM 8 CA GLU A 458 28.326 34.655 27.388 1.00 29.30 ATOM 9 C GLU A 458 29.200 33.415 27.228 1.00 28.62 ATOM 10 O GLU A 458 29.471 32.997 26.115 1.00 28.86 ATOM 11 CB GLU A 458 29.211 35.889 27.174 1.00 32.44 ATOM 12 CG GLU A 458 28.452 37.195 27.002 1.00 35.80 ATOM 13 CD GLU A 458 27.888 37.392 25.605 1.00 38.61 ATOM 14 OE1 GLU A 458 27.789 36.408 24.833 1.00 40.73 ATOM 15 OE2 GLU A 458 27.538 38.550 25.278 1.00 43.09 ATOM 16 N ASN A 459 29.672 32.869 28.342 1.00 27.21 ATOM 17 CA ASN A 459 30.575 31.731 28.353 1.00 26.64 ATOM 18 C ASN A 459 29.748 30.446 28.312 1.00 24.68 ATOM 19 O ASN A 459 28.850 30.265 29.123 1.00 22.58 ATOM 20 CB ASN A 459 31.454 31.819 29.608 1.00 27.75 ATOM 21 CG ASN A 459 32.349 30.622 29.788 1.00 28.87 ATOM 22 OD1 ASN A 459 31.895 29.556 30.193 1.00 29.49 ATOM 23 ND2 ASN A 459 33.642 30.799 29.533 1.00 30.51 ATOM 24 N SER A 460 30.074 29.562 27.372 1.00 24.37 ATOM 25 CA SER A 460 29.337 28.314 27.131 1.00 23.62 ATOM 26 C SER A 460 29.202 27.395 28.356 1.00 22.27 ATOM 27 O SER A 460 28.129 26.836 28.610 1.00 21.93 ATOM 28 CB SER A 460 30.006 27.545 25.988 1.00 25.50 ATOM 29 OG SER A 460 29.333 26.338 25.730 1.00 28.18 ATOM 30 N GLU A 461 30.288 27.240 29.108 1.00 20.40 ATOM 31 CA GLU A 461 30.281 26.408 30.304 1.00 20.03 ATOM 32 C GLU A 461 29.461 27.049 31.433 1.00 19.63 ATOM 33 O GLU A 461 28.694 26.358 32.110 1.00 19.84 ATOM 34 CB GLU A 461 31.715 26.099 30.759 1.00 19.86 ATOM 35 CG GLU A 461 32.438 25.140 29.820 1.00 18.77 ATOM 36 CD GLU A 461 33.891 24.906 30.186 1.00 18.86 ATOM 37 OE1 GLU A 461 34.662 24.500 29.283 1.00 18.24 ATOM 38 OE2 GLU A 461 34.259 25.112 31.359 1.00 18.14 ATOM 39 N ASP A 462 29.610 28.363 31.605 1.00 19.55 ATOM 40 CA ASP A 462 28.810 29.133 32.579 1.00 19.94 ATOM 41 C ASP A 462 27.314 29.071 32.246 1.00 18.79 ATOM 42 O ASP A 462 26.478 28.957 33.145 1.00 17.62 ATOM 43 CB ASP A 462 29.253 30.597 32.633 1.00 21.63 ATOM 44 CG ASP A 462 30.650 30.787 33.234 1.00 23.54 ATOM 45 OD1 ASP A 462 31.218 29.828 33.800 1.00 26.89 ATOM 46 OD2 ASP A 462 31.170 31.921 33.145 1.00 25.57 ATOM 47 N LEU A 463 26.997 29.143 30.956 1.00 17.83 ATOM 48 CA LEU A 463 25.611 29.083 30.475 1.00 17.31 ATOM 49 C LEU A 463 24.945 27.749 30.802 1.00 17.90 ATOM 50 O LEU A 463 23.792 27.735 31.275 1.00 16.75 ATOM 51 CB LEU A 463 25.548 29.366 28.971 1.00 16.98 ATOM 52 CG LEU A 463 24.171 29.374 28.282 1.00 16.56 ATOM 53 CD1 LEU A 463 23.185 30.269 29.016 1.00 16.01 ATOM 54 CD2 LEU A 463 24.310 29.804 26.827 1.00 16.23 ATOM 55 N MET A 464 25.650 26.643 30.567 0.50 18.06 ATOM 56 CA MET A 464 25.128 25.325 30.933 0.50 18.94 ATOM 57 C MET A 464 24.880 25.204 32.436 0.50 18.79 ATOM 58 O MET A 464 23.848 24.676 32.846 0.50 18.33 ATOM 59 CB MET A 464 26.066 24.211 30.489 0.50 19.99 ATOM 60 CG MET A 464 25.467 22.821 30.649 0.50 21.00 ATOM 61 SD MET A 464 24.039 22.537 29.579 0.50 23.29 ATOM 62 CE MET A 464 22.679 22.742 30.716 0.50 23.27 ATOM 63 N LYS A 465 25.819 25.691 33.252 1.00 18.93 ATOM 64 CA LYS A 465 25.639 25.680 34.714 1.00 19.32 ATOM 65 C LYS A 465 24.470 26.556 35.163 1.00 17.66 ATOM 66 O LYS A 465 23.724 26.196 36.077 1.00 18.22 ATOM 67 CB LYS A 465 26.937 26.070 35.448 1.00 21.66 ATOM 68 CG LYS A 465 28.007 24.980 35.364 1.00 23.50 ATOM 69 CD LYS A 465 29.124 25.159 36.388 1.00 26.04 ATOM 70 CE LYS A 465 29.961 26.395 36.112 1.00 27.16 ATOM 71 NZ LYS A 465 31.138 26.482 37.032 1.00 27.78 ATOM 72 N GLN A 466 24.309 27.697 34.503 1.00 17.30 ATOM 73 CA GLN A 466 23.185 28.591 34.747 1.00 16.79 ATOM 74 C GLN A 466 21.835 27.871 34.479 1.00 16.01 ATOM 75 O GLN A 466 20.928 27.876 35.320 1.00 15.36 ATOM 76 CB GLN A 466 23.365 29.828 33.877 1.00 18.26 ATOM 77 CG GLN A 466 22.476 30.983 34.207 1.00 18.89 ATOM 78 CD GLN A 466 22.875 32.254 33.482 1.00 19.29 ATOM 79 OE1 GLN A 466 23.609 32.237 32.479 1.00 18.52 ATOM 80 NE2 GLN A 466 22.381 33.374 33.984 1.00 19.16 ATOM 81 N ILE A 467 21.739 27.185 33.344 1.00 15.12 ATOM 82 CA ILE A 467 20.536 26.424 33.004 1.00 14.69 ATOM 83 C ILE A 467 20.259 25.327 34.046 1.00 15.22 ATOM 84 O ILE A 467 19.116 25.165 34.486 1.00 14.88 ATOM 85 CB ILE A 467 20.632 25.837 31.577 1.00 14.18 ATOM 86 CG1 ILE A 467 20.534 26.962 30.529 1.00 14.12 ATOM 87 CG2 ILE A 467 19.554 24.786 31.341 1.00 14.36 ATOM 88 CD1 ILE A 467 21.194 26.628 29.198 1.00 14.07 ATOM 89 N LEU A 468 21.297 24.588 34.442 1.00 15.99 ATOM 90 CA LEU A 468 21.137 23.507 35.417 1.00 17.64 ATOM 91 C LEU A 468 20.746 24.010 36.808 1.00 17.44 ATOM 92 O LEU A 468 19.906 23.396 37.466 1.00 17.06 ATOM 93 CB LEU A 468 22.398 22.629 35.487 1.00 18.24 ATOM 94 CG LEU A 468 22.713 21.803 34.231 1.00 19.60 ATOM 95 CD1 LEU A 468 24.028 21.053 34.395 1.00 20.66 ATOM 96 CD2 LEU A 468 21.599 20.847 33.835 1.00 20.24 ATOM 97 N GLN A 469 21.348 25.116 37.246 1.00 18.33 ATOM 98 CA GLN A 469 20.992 25.756 38.526 1.00 19.59 ATOM 99 C GLN A 469 19.528 26.202 38.547 1.00 18.01 ATOM 100 O GLN A 469 18.829 25.964 39.531 1.00 17.41 ATOM 101 CB GLN A 469 21.911 26.956 38.824 1.00 22.61 ATOM 102 CG GLN A 469 21.574 27.763 40.087 1.00 26.64 ATOM 103 CD GLN A 469 20.795 29.063 39.834 1.00 30.18 ATOM 104 OE1 GLN A 469 19.774 29.341 40.487 1.00 34.89 ATOM 105 NE2 GLN A 469 21.292 29.884 38.899 1.00 34.39 ATOM 106 N ILE A 470 19.087 26.854 37.472 1.00 15.94 ATOM 107 CA ILE A 470 17.708 27.352 37.352 1.00 15.28 ATOM 108 C ILE A 470 16.705 26.188 37.303 1.00 15.07 ATOM 109 O ILE A 470 15.635 26.251 37.926 1.00 15.10 ATOM 110 CB ILE A 470 17.562 28.299 36.136 1.00 14.75 ATOM 111 CG1 ILE A 470 18.400 29.569 36.377 1.00 14.75 ATOM 112 CG2 ILE A 470 16.100 28.677 35.882 1.00 14.96 ATOM 113 CD1 ILE A 470 18.677 30.381 35.140 1.00 14.62 ATOM 114 N HIS A 471 17.051 25.134 36.568 1.00 14.89 ATOM 115 CA HIS A 471 16.248 23.920 36.510 1.00 15.09 ATOM 116 C HIS A 471 16.032 23.333 37.899 1.00 15.50 ATOM 117 O HIS A 471 14.893 23.068 38.292 1.00 15.43 ATOM 118 CB HIS A 471 16.920 22.897 35.588 1.00 15.45 ATOM 119 CG HIS A 471 16.209 21.586 35.506 1.00 15.62 ATOM 120 ND1 HIS A 471 15.156 21.359 34.644 1.00 15.63 ATOM 121 CD2 HIS A 471 16.429 20.418 36.152 1.00 15.62 ATOM 122 CE1 HIS A 471 14.743 20.113 34.780 1.00 15.94 ATOM 123 NE2 HIS A 471 15.502 19.518 35.685 1.00 16.38 ATOM 124 N SER A 472 17.133 23.158 38.632 0.50 15.58 ATOM 125 CA SER A 472 17.114 22.639 39.995 0.50 16.09 ATOM 126 C SER A 472 16.298 23.517 40.941 0.50 15.83 ATOM 127 O SER A 472 15.483 23.010 41.715 0.50 16.23 ATOM 128 CB SER A 472 18.554 22.509 40.515 0.50 16.30 ATOM 129 OG SER A 472 18.592 21.749 41.705 0.50 17.08 ATOM 130 N TRP A 473 16.520 24.828 40.869 1.00 15.78 ATOM 131 CA TRP A 473 15.769 25.814 41.672 1.00 15.83 ATOM 132 C TRP A 473 14.246 25.718 41.446 1.00 15.92 ATOM 133 O TRP A 473 13.464 25.738 42.401 1.00 15.55 ATOM 134 CB TRP A 473 16.252 27.244 41.391 1.00 16.27 ATOM 135 CG TRP A 473 15.356 28.269 42.004 1.00 17.06 ATOM 136 CD1 TRP A 473 15.423 28.765 43.281 1.00 17.65 ATOM 137 CD2 TRP A 473 14.216 28.883 41.393 1.00 17.25 ATOM 138 NE1 TRP A 473 14.402 29.660 43.490 1.00 18.02 ATOM 139 CE2 TRP A 473 13.637 29.742 42.355 1.00 17.38 ATOM 140 CE3 TRP A 473 13.614 28.779 40.133 1.00 16.84 ATOM 141 CZ2 TRP A 473 12.508 30.510 42.087 1.00 17.55 ATOM 142 CZ3 TRP A 473 12.475 29.539 39.870 1.00 17.00 ATOM 143 CH2 TRP A 473 11.931 30.388 40.846 1.00 17.25 ATOM 144 N ALA A 474 13.852 25.601 40.183 1.00 15.70 ATOM 145 CA ALA A 474 12.435 25.591 39.798 1.00 15.90 ATOM 146 C ALA A 474 11.728 24.323 40.252 1.00 16.46 ATOM 147 O ALA A 474 10.563 24.381 40.680 1.00 15.34 ATOM 148 CB ALA A 474 12.286 25.771 38.293 1.00 15.81 ATOM 149 N LYS A 475 12.412 23.182 40.152 1.00 17.31 ATOM 150 CA LYS A 475 11.870 21.931 40.672 1.00 18.85 ATOM 151 C LYS A 475 11.654 22.044 42.176 1.00 19.52 ATOM 152 O LYS A 475 10.603 21.661 42.677 1.00 19.22 ATOM 153 CB LYS A 475 12.769 20.735 40.369 1.00 19.94 ATOM 154 CG LYS A 475 12.848 20.375 38.890 1.00 20.87 ATOM 155 CD LYS A 475 13.374 18.968 38.662 1.00 22.09 ATOM 156 CE LYS A 475 14.753 18.759 39.269 1.00 23.01 ATOM 157 NZ LYS A 475 15.235 17.386 38.961 1.00 24.88 ATOM 158 N ASP A 476 12.647 22.585 42.881 1.00 20.86 ATOM 159 CA ASP A 476 12.548 22.770 44.338 1.00 22.47 ATOM 160 C ASP A 476 11.430 23.727 44.732 1.00 21.41 ATOM 161 O ASP A 476 10.702 23.458 45.686 1.00 21.95 ATOM 162 CB ASP A 476 13.873 23.279 44.927 1.00 24.03 ATOM 163 CG ASP A 476 14.963 22.229 44.929 1.00 25.95 ATOM 164 OD1 ASP A 476 14.675 21.025 44.745 1.00 27.93 ATOM 165 OD2 ASP A 476 16.133 22.620 45.126 1.00 29.60 ATOM 166 N LYS A 477 11.305 24.840 44.010 1.00 20.80 ATOM 167 CA LYS A 477 10.253 25.824 44.299 1.00 21.15 ATOM 168 C LYS A 477 8.875 25.204 44.102 1.00 20.42 ATOM 169 O LYS A 477 7.971 25.441 44.904 1.00 20.12 ATOM 170 CB LYS A 477 10.403 27.082 43.437 1.00 21.73 ATOM 171 CG LYS A 477 9.465 28.235 43.794 1.00 23.74 ATOM 172 CD LYS A 477 9.750 28.829 45.172 1.00 24.85 ATOM 173 CE LYS A 477 9.102 30.199 45.317 1.00 27.54 ATOM 174 NZ LYS A 477 9.018 30.734 46.716 1.00 28.73 ATOM 175 N ALA A 478 8.717 24.412 43.038 1.00 19.69 ATOM 176 CA ALA A 478 7.453 23.726 42.772 1.00 19.20 ATOM 177 C ALA A 478 7.106 22.765 43.921 1.00 20.24 ATOM 178 O ALA A 478 5.965 22.730 44.399 1.00 20.11 ATOM 179 CB ALA A 478 7.527 22.972 41.450 1.00 18.82 ATOM 180 N THR A 479 8.102 21.991 44.346 1.00 20.92 ATOM 181 CA THR A 479 7.944 21.029 45.439 1.00 22.12 ATOM 182 C THR A 479 7.594 21.712 46.772 1.00 23.53 ATOM 183 O THR A 479 6.779 21.184 47.538 1.00 23.13 ATOM 184 CB THR A 479 9.210 20.169 45.590 1.00 22.05 ATOM 185 OG1 THR A 479 9.437 19.468 44.366 1.00 21.55 ATOM 186 CG2 THR A 479 9.083 19.149 46.726 1.00 22.92 ATOM 187 N ASP A 480 8.207 22.869 47.032 1.00 24.59 ATOM 188 CA ASP A 480 7.934 23.657 48.248 1.00 26.23 ATOM 189 C ASP A 480 6.516 24.207 48.255 1.00 26.24 ATOM 190 O ASP A 480 5.855 24.201 49.300 1.00 26.43 ATOM 191 CB ASP A 480 8.939 24.809 48.409 1.00 28.13 ATOM 192 CG ASP A 480 10.348 24.322 48.734 1.00 30.86 ATOM 193 OD1 ASP A 480 10.514 23.190 49.249 1.00 33.63 ATOM 194 OD2 ASP A 480 11.306 25.082 48.475 1.00 33.57 ATOM 195 N ILE A 481 6.056 24.678 47.093 1.00 25.29 ATOM 196 CA ILE A 481 4.675 25.133 46.927 1.00 24.66 ATOM 197 C ILE A 481 3.704 23.994 47.225 1.00 24.64 ATOM 198 O ILE A 481 2.765 24.172 48.011 1.00 25.60 ATOM 199 CB ILE A 481 4.426 25.737 45.523 1.00 24.50 ATOM 200 CG1 ILE A 481 5.152 27.085 45.406 1.00 23.90 ATOM 201 CG2 ILE A 481 2.933 25.941 45.263 1.00 24.71 ATOM 202 CD1 ILE A 481 5.421 27.521 43.984 1.00 23.77 ATOM 203 N TYR A 482 3.924 22.839 46.604 1.00 24.12 ATOM 204 CA TYR A 482 3.141 21.650 46.923 1.00 25.29 ATOM 205 C TYR A 482 3.130 21.392 48.442 1.00 27.21 ATOM 206 O TYR A 482 2.060 21.307 49.043 1.00 26.08 ATOM 207 CB TYR A 482 3.660 20.410 46.184 1.00 24.41 ATOM 208 CG TYR A 482 3.028 19.145 46.688 1.00 24.61 ATOM 209 CD1 TYR A 482 1.686 18.873 46.431 1.00 24.79 ATOM 210 CD2 TYR A 482 3.747 18.242 47.477 1.00 25.26 ATOM 211 CE1 TYR A 482 1.083 17.727 46.910 1.00 24.66 ATOM 212 CE2 TYR A 482 3.154 17.089 47.963 1.00 26.03 ATOM 213 CZ TYR A 482 1.820 16.838 47.681 1.00 25.71 ATOM 214 OH TYR A 482 1.220 15.700 48.155 1.00 26.62 ATOM 215 N ASN A 483 4.321 21.305 49.041 1.00 28.80 ATOM 216 CA ASN A 483 4.465 20.955 50.473 1.00 31.82 ATOM 217 C ASN A 483 3.768 21.919 51.435 1.00 34.59 ATOM 218 O ASN A 483 3.133 21.472 52.394 1.00 36.09 ATOM 219 CB ASN A 483 5.943 20.811 50.869 1.00 30.74 ATOM 220 CG ASN A 483 6.565 19.531 50.353 1.00 29.60 ATOM 221 OD1 ASN A 483 5.890 18.518 50.181 1.00 30.05 ATOM 222 ND2 ASN A 483 7.869 19.563 50.123 1.00 30.45 ATOM 223 N LYS A 484 3.881 23.219 51.178 1.00 37.88 ATOM 224 CA LYS A 484 3.204 24.232 51.997 1.00 42.99 ATOM 225 C LYS A 484 1.678 24.105 51.955 1.00 46.96 ATOM 226 O LYS A 484 1.024 24.120 52.999 1.00 46.00 ATOM 227 CB LYS A 484 3.621 25.646 51.578 1.00 44.74 ATOM 228 CG LYS A 484 5.017 26.032 52.046 1.00 46.90 ATOM 229 CD LYS A 484 5.441 27.385 51.491 1.00 49.30 ATOM 230 CE LYS A 484 6.619 27.975 52.254 1.00 50.01 ATOM 231 NZ LYS A 484 6.188 28.675 53.499 1.00 50.53 ATOM 232 N HIS A 485 1.125 23.972 50.752 1.00 51.04 ATOM 233 CA HIS A 485 -0.326 23.837 50.576 1.00 54.20 ATOM 234 C HIS A 485 -0.831 22.480 51.068 1.00 53.98 ATOM 235 O HIS A 485 -1.981 22.358 51.474 1.00 54.99 ATOM 236 CB HIS A 485 -0.731 24.057 49.115 1.00 57.28 ATOM 237 CG HIS A 485 -0.309 25.384 48.558 1.00 62.74 ATOM 238 ND1 HIS A 485 -0.154 26.514 49.338 1.00 65.37 ATOM 239 CD2 HIS A 485 -0.020 25.763 47.290 1.00 65.07 ATOM 240 CE1 HIS A 485 0.219 27.526 48.575 1.00 66.54 ATOM 241 NE2 HIS A 485 0.304 27.098 47.328 1.00 66.80 ATOM 242 N ASN A 486 0.037 21.473 51.020 1.00 53.59 ATOM 243 CA ASN A 486 -0.232 20.162 51.592 1.00 54.34 ATOM 244 C ASN A 486 0.140 20.202 53.078 1.00 53.32 ATOM 245 O ASN A 486 0.170 19.179 53.759 1.00 51.17 ATOM 246 CB ASN A 486 0.594 19.111 50.841 1.00 55.69 ATOM 247 CG ASN A 486 0.137 17.689 51.102 1.00 57.30 ATOM 248 OD1 ASN A 486 -1.048 17.425 51.308 1.00 58.83 ATOM 249 ND2 ASN A 486 1.084 16.756 51.074 1.00 57.18 ATOM 250 C1 EDO A 508 34.567 21.920 25.569 1.00 45.19 ATOM 251 O1 EDO A 508 35.685 22.799 25.728 1.00 45.07 ATOM 252 C2 EDO A 508 33.793 21.839 26.880 1.00 44.76 ATOM 253 O2 EDO A 508 33.417 23.149 27.336 1.00 44.52 TER