HEADER OXIDOREDUCTASE 29-APR-16 5JMP TITLE Structure of Plasmodium falciparum DXR in complex with a TITLE 2 beta-substituted fosmidomycin analogue, LC57 and manganese COMPND MOL_ID: 1; COMPND 2 MOLECULE: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, COMPND 3 apicoplastic; COMPND 4 CHAIN: A, B; COMPND 5 EC: 1.1.1.267; COMPND 6 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 1.70 ANGSTORMS DBREF 5JMP A 75 488 UNP Q8IKG4 DXR_PLAF7 75 488 SEQRES 1 A 30 SER GLU ASN SER GLU ASP LEU MET LYS GLN ILE LEU GLN SEQRES 2 A 30 ILE HIS SER TRP ALA LYS ASP LYS ALA THR ASP ILE TYR SEQRES 3 A 30 ASN LYS HIS ASN ATOM 1 N SER A 457 24.735 34.062 30.490 1.00 20.86 ATOM 2 CA SER A 457 26.188 33.879 30.396 1.00 22.64 ATOM 3 C SER A 457 26.666 33.799 28.953 1.00 23.83 ATOM 4 O SER A 457 26.049 33.119 28.131 1.00 22.13 ATOM 5 CB SER A 457 26.628 32.599 31.110 1.00 23.04 ATOM 6 OG SER A 457 26.312 32.634 32.491 1.00 24.71 ATOM 7 N GLU A 458 27.773 34.489 28.666 1.00 25.89 ATOM 8 CA GLU A 458 28.418 34.439 27.352 1.00 28.54 ATOM 9 C GLU A 458 29.253 33.160 27.158 1.00 27.62 ATOM 10 O GLU A 458 29.359 32.646 26.046 1.00 28.28 ATOM 11 CB GLU A 458 29.314 35.668 27.152 1.00 31.49 ATOM 12 CG GLU A 458 28.578 37.003 27.096 1.00 35.07 ATOM 13 CD GLU A 458 28.009 37.328 25.723 1.00 38.72 ATOM 14 OE1 GLU A 458 27.645 36.393 24.975 1.00 42.96 ATOM 15 OE2 GLU A 458 27.926 38.532 25.386 1.00 42.60 ATOM 16 N ASN A 459 29.851 32.669 28.239 1.00 26.88 ATOM 17 CA ASN A 459 30.676 31.466 28.217 1.00 26.64 ATOM 18 C ASN A 459 29.783 30.221 28.181 1.00 25.19 ATOM 19 O ASN A 459 28.862 30.110 28.983 1.00 22.75 ATOM 20 CB ASN A 459 31.575 31.474 29.462 1.00 28.59 ATOM 21 CG ASN A 459 32.503 30.291 29.528 1.00 30.97 ATOM 22 OD1 ASN A 459 32.068 29.158 29.708 1.00 33.35 ATOM 23 ND2 ASN A 459 33.804 30.549 29.413 1.00 32.55 ATOM 24 N SER A 460 30.069 29.280 27.276 1.00 24.42 ATOM 25 CA SER A 460 29.199 28.106 27.080 1.00 23.44 ATOM 26 C SER A 460 29.159 27.162 28.284 1.00 22.22 ATOM 27 O SER A 460 28.124 26.553 28.547 1.00 21.10 ATOM 28 CB SER A 460 29.547 27.334 25.796 1.00 24.51 ATOM 29 OG SER A 460 30.596 26.404 25.995 1.00 25.82 ATOM 30 N GLU A 461 30.268 27.055 29.020 1.00 21.17 ATOM 31 CA GLU A 461 30.308 26.220 30.223 1.00 20.40 ATOM 32 C GLU A 461 29.502 26.874 31.347 1.00 19.30 ATOM 33 O GLU A 461 28.738 26.188 32.039 1.00 20.21 ATOM 34 CB GLU A 461 31.752 25.935 30.671 1.00 20.37 ATOM 35 CG GLU A 461 32.462 24.910 29.801 1.00 19.98 ATOM 36 CD GLU A 461 33.942 24.763 30.121 1.00 19.95 ATOM 37 OE1 GLU A 461 34.694 24.370 29.212 1.00 19.50 ATOM 38 OE2 GLU A 461 34.348 25.017 31.267 1.00 20.45 ATOM 39 N ASP A 462 29.665 28.188 31.516 1.00 18.89 ATOM 40 CA ASP A 462 28.860 28.955 32.486 1.00 20.00 ATOM 41 C ASP A 462 27.366 28.891 32.149 1.00 19.20 ATOM 42 O ASP A 462 26.527 28.819 33.054 1.00 18.03 ATOM 43 CB ASP A 462 29.301 30.427 32.564 1.00 20.99 ATOM 44 CG ASP A 462 30.685 30.607 33.196 1.00 22.63 ATOM 45 OD1 ASP A 462 31.209 29.658 33.813 1.00 25.12 ATOM 46 OD2 ASP A 462 31.245 31.713 33.084 1.00 24.83 ATOM 47 N LEU A 463 27.048 28.911 30.855 1.00 19.01 ATOM 48 CA LEU A 463 25.649 28.870 30.401 1.00 18.51 ATOM 49 C LEU A 463 24.970 27.551 30.748 1.00 18.85 ATOM 50 O LEU A 463 23.835 27.556 31.262 1.00 17.67 ATOM 51 CB LEU A 463 25.554 29.161 28.899 1.00 18.46 ATOM 52 CG LEU A 463 24.168 29.260 28.252 1.00 17.90 ATOM 53 CD1 LEU A 463 23.226 30.189 29.007 1.00 17.80 ATOM 54 CD2 LEU A 463 24.312 29.718 26.811 1.00 18.25 ATOM 55 N MET A 464 25.649 26.438 30.478 0.50 19.07 ATOM 56 CA MET A 464 25.149 25.117 30.848 0.50 19.89 ATOM 57 C MET A 464 24.907 24.994 32.356 0.50 19.68 ATOM 58 O MET A 464 23.875 24.477 32.775 0.50 19.09 ATOM 59 CB MET A 464 26.120 24.028 30.396 0.50 20.82 ATOM 60 CG MET A 464 25.702 22.626 30.809 0.50 21.60 ATOM 61 SD MET A 464 24.199 22.062 29.990 0.50 23.35 ATOM 62 CE MET A 464 23.072 23.363 30.457 0.50 23.74 ATOM 63 N LYS A 465 25.852 25.474 33.163 1.00 19.95 ATOM 64 CA LYS A 465 25.693 25.465 34.631 1.00 19.69 ATOM 65 C LYS A 465 24.523 26.347 35.107 1.00 18.53 ATOM 66 O LYS A 465 23.779 25.979 36.024 1.00 17.63 ATOM 67 CB LYS A 465 27.001 25.864 35.331 1.00 22.01 ATOM 68 CG LYS A 465 28.089 24.803 35.172 1.00 23.58 ATOM 69 CD LYS A 465 29.182 24.891 36.229 1.00 26.49 ATOM 70 CE LYS A 465 29.980 26.180 36.134 1.00 27.48 ATOM 71 NZ LYS A 465 31.222 26.123 36.967 1.00 27.51 ATOM 72 N GLN A 466 24.357 27.494 34.453 1.00 17.57 ATOM 73 CA GLN A 466 23.248 28.400 34.717 1.00 17.58 ATOM 74 C GLN A 466 21.890 27.704 34.447 1.00 16.56 ATOM 75 O GLN A 466 21.007 27.677 35.313 1.00 15.41 ATOM 76 CB GLN A 466 23.441 29.650 33.873 1.00 18.48 ATOM 77 CG GLN A 466 22.392 30.721 34.032 1.00 19.10 ATOM 78 CD GLN A 466 22.826 32.034 33.419 1.00 19.06 ATOM 79 OE1 GLN A 466 23.626 32.069 32.471 1.00 19.25 ATOM 80 NE2 GLN A 466 22.314 33.127 33.963 1.00 18.48 ATOM 81 N ILE A 467 21.758 27.079 33.276 1.00 15.68 ATOM 82 CA ILE A 467 20.541 26.318 32.947 1.00 15.13 ATOM 83 C ILE A 467 20.259 25.210 33.986 1.00 15.42 ATOM 84 O ILE A 467 19.123 25.066 34.464 1.00 15.47 ATOM 85 CB ILE A 467 20.605 25.764 31.499 1.00 14.89 ATOM 86 CG1 ILE A 467 20.478 26.919 30.486 1.00 14.88 ATOM 87 CG2 ILE A 467 19.516 24.716 31.245 1.00 15.05 ATOM 88 CD1 ILE A 467 21.137 26.634 29.152 1.00 15.05 ATOM 89 N LEU A 468 21.283 24.437 34.340 1.00 15.90 ATOM 90 CA LEU A 468 21.121 23.330 35.281 1.00 16.78 ATOM 91 C LEU A 468 20.726 23.813 36.676 1.00 16.38 ATOM 92 O LEU A 468 19.891 23.199 37.344 1.00 16.24 ATOM 93 CB LEU A 468 22.391 22.464 35.352 1.00 17.42 ATOM 94 CG LEU A 468 22.673 21.581 34.123 1.00 18.47 ATOM 95 CD1 LEU A 468 24.020 20.880 34.260 1.00 19.22 ATOM 96 CD2 LEU A 468 21.566 20.563 33.853 1.00 19.06 ATOM 97 N GLN A 469 21.305 24.925 37.102 1.00 17.62 ATOM 98 CA GLN A 469 20.994 25.473 38.417 1.00 18.58 ATOM 99 C GLN A 469 19.549 25.989 38.465 1.00 16.76 ATOM 100 O GLN A 469 18.858 25.772 39.454 1.00 17.11 ATOM 101 CB GLN A 469 21.995 26.563 38.803 1.00 22.24 ATOM 102 CG GLN A 469 22.111 26.798 40.308 1.00 26.60 ATOM 103 CD GLN A 469 21.169 27.862 40.819 1.00 30.10 ATOM 104 OE1 GLN A 469 21.106 28.953 40.253 1.00 36.61 ATOM 105 NE2 GLN A 469 20.446 27.569 41.907 1.00 31.67 ATOM 106 N ILE A 470 19.100 26.647 37.396 1.00 15.51 ATOM 107 CA ILE A 470 17.720 27.159 37.302 1.00 14.54 ATOM 108 C ILE A 470 16.713 25.992 37.254 1.00 14.68 ATOM 109 O ILE A 470 15.664 26.038 37.911 1.00 15.05 ATOM 110 CB ILE A 470 17.561 28.113 36.090 1.00 14.22 ATOM 111 CG1 ILE A 470 18.414 29.379 36.307 1.00 14.08 ATOM 112 CG2 ILE A 470 16.094 28.484 35.851 1.00 13.98 ATOM 113 CD1 ILE A 470 18.674 30.183 35.065 1.00 13.90 ATOM 114 N HIS A 471 17.029 24.966 36.468 1.00 14.56 ATOM 115 CA HIS A 471 16.246 23.722 36.437 1.00 15.07 ATOM 116 C HIS A 471 16.036 23.132 37.841 1.00 15.23 ATOM 117 O HIS A 471 14.894 22.834 38.238 1.00 15.14 ATOM 118 CB HIS A 471 16.930 22.701 35.525 1.00 15.38 ATOM 119 CG HIS A 471 16.211 21.394 35.423 1.00 16.10 ATOM 120 ND1 HIS A 471 15.161 21.184 34.556 1.00 16.64 ATOM 121 CD2 HIS A 471 16.412 20.216 36.063 1.00 16.54 ATOM 122 CE1 HIS A 471 14.739 19.937 34.673 1.00 16.18 ATOM 123 NE2 HIS A 471 15.482 19.330 35.582 1.00 16.88 ATOM 124 N SER A 472 17.129 22.991 38.590 0.50 15.04 ATOM 125 CA SER A 472 17.076 22.448 39.941 0.50 15.44 ATOM 126 C SER A 472 16.288 23.352 40.901 0.50 15.28 ATOM 127 O SER A 472 15.492 22.861 41.705 0.50 15.63 ATOM 128 CB SER A 472 18.492 22.192 40.473 0.50 15.50 ATOM 129 OG SER A 472 18.455 21.827 41.841 0.50 15.57 ATOM 130 N TRP A 473 16.502 24.663 40.806 1.00 15.12 ATOM 131 CA TRP A 473 15.762 25.631 41.617 1.00 14.84 ATOM 132 C TRP A 473 14.243 25.527 41.374 1.00 14.79 ATOM 133 O TRP A 473 13.459 25.554 42.326 1.00 15.47 ATOM 134 CB TRP A 473 16.246 27.065 41.352 1.00 14.95 ATOM 135 CG TRP A 473 15.347 28.092 41.966 1.00 15.37 ATOM 136 CD1 TRP A 473 15.407 28.588 43.236 1.00 15.84 ATOM 137 CD2 TRP A 473 14.219 28.710 41.341 1.00 15.14 ATOM 138 NE1 TRP A 473 14.376 29.486 43.442 1.00 16.03 ATOM 139 CE2 TRP A 473 13.631 29.573 42.292 1.00 15.38 ATOM 140 CE3 TRP A 473 13.640 28.614 40.065 1.00 14.86 ATOM 141 CZ2 TRP A 473 12.503 30.342 42.004 1.00 15.52 ATOM 142 CZ3 TRP A 473 12.497 29.372 39.786 1.00 14.73 ATOM 143 CH2 TRP A 473 11.941 30.219 40.752 1.00 14.87 ATOM 144 N ALA A 474 13.857 25.394 40.110 1.00 14.53 ATOM 145 CA ALA A 474 12.434 25.400 39.723 1.00 14.73 ATOM 146 C ALA A 474 11.711 24.126 40.171 1.00 15.23 ATOM 147 O ALA A 474 10.548 24.187 40.611 1.00 14.11 ATOM 148 CB ALA A 474 12.277 25.622 38.219 1.00 14.71 ATOM 149 N LYS A 475 12.389 22.984 40.071 1.00 15.64 ATOM 150 CA LYS A 475 11.842 21.736 40.600 1.00 17.04 ATOM 151 C LYS A 475 11.641 21.850 42.112 1.00 17.28 ATOM 152 O LYS A 475 10.575 21.510 42.627 1.00 16.85 ATOM 153 CB LYS A 475 12.750 20.539 40.309 1.00 18.07 ATOM 154 CG LYS A 475 12.820 20.134 38.846 1.00 18.98 ATOM 155 CD LYS A 475 13.367 18.724 38.667 1.00 20.71 ATOM 156 CE LYS A 475 14.780 18.560 39.206 1.00 21.57 ATOM 157 NZ LYS A 475 15.155 17.126 39.137 1.00 22.79 ATOM 158 N ASP A 476 12.669 22.331 42.806 1.00 17.45 ATOM 159 CA ASP A 476 12.594 22.533 44.260 1.00 18.68 ATOM 160 C ASP A 476 11.463 23.490 44.655 1.00 18.39 ATOM 161 O ASP A 476 10.731 23.211 45.606 1.00 17.59 ATOM 162 CB ASP A 476 13.927 23.060 44.819 1.00 20.04 ATOM 163 CG ASP A 476 15.022 22.003 44.851 1.00 22.13 ATOM 164 OD1 ASP A 476 14.738 20.800 44.671 1.00 24.07 ATOM 165 OD2 ASP A 476 16.188 22.384 45.089 1.00 23.88 ATOM 166 N LYS A 477 11.330 24.609 43.932 1.00 18.21 ATOM 167 CA LYS A 477 10.273 25.596 44.213 1.00 18.79 ATOM 168 C LYS A 477 8.881 24.983 44.008 1.00 17.45 ATOM 169 O LYS A 477 7.990 25.215 44.813 1.00 16.89 ATOM 170 CB LYS A 477 10.442 26.862 43.353 1.00 19.97 ATOM 171 CG LYS A 477 9.493 28.016 43.667 1.00 22.16 ATOM 172 CD LYS A 477 9.735 28.633 45.047 1.00 23.56 ATOM 173 CE LYS A 477 9.302 30.089 45.064 1.00 26.42 ATOM 174 NZ LYS A 477 9.164 30.729 46.413 1.00 28.77 ATOM 175 N ALA A 478 8.696 24.220 42.929 1.00 16.80 ATOM 176 CA ALA A 478 7.432 23.501 42.690 1.00 16.35 ATOM 177 C ALA A 478 7.107 22.535 43.846 1.00 17.09 ATOM 178 O ALA A 478 5.970 22.495 44.351 1.00 17.53 ATOM 179 CB ALA A 478 7.494 22.738 41.372 1.00 16.01 ATOM 180 N THR A 479 8.116 21.779 44.266 1.00 17.59 ATOM 181 CA THR A 479 7.963 20.810 45.355 1.00 19.16 ATOM 182 C THR A 479 7.643 21.495 46.695 1.00 20.37 ATOM 183 O THR A 479 6.816 20.988 47.471 1.00 20.94 ATOM 184 CB THR A 479 9.215 19.921 45.475 1.00 18.79 ATOM 185 OG1 THR A 479 9.367 19.171 44.266 1.00 18.54 ATOM 186 CG2 THR A 479 9.112 18.953 46.641 1.00 19.22 ATOM 187 N ASP A 480 8.286 22.631 46.961 1.00 21.31 ATOM 188 CA ASP A 480 8.008 23.421 48.179 1.00 22.79 ATOM 189 C ASP A 480 6.581 23.972 48.194 1.00 22.80 ATOM 190 O ASP A 480 5.909 23.936 49.233 1.00 23.22 ATOM 191 CB ASP A 480 9.014 24.570 48.352 1.00 23.90 ATOM 192 CG ASP A 480 10.428 24.086 48.682 1.00 26.39 ATOM 193 OD1 ASP A 480 10.615 22.921 49.102 1.00 28.80 ATOM 194 OD2 ASP A 480 11.375 24.892 48.525 1.00 28.36 ATOM 195 N ILE A 481 6.121 24.480 47.047 1.00 22.10 ATOM 196 CA ILE A 481 4.745 24.968 46.908 1.00 22.11 ATOM 197 C ILE A 481 3.746 23.846 47.210 1.00 22.47 ATOM 198 O ILE A 481 2.793 24.057 47.974 1.00 22.54 ATOM 199 CB ILE A 481 4.491 25.597 45.510 1.00 22.40 ATOM 200 CG1 ILE A 481 5.256 26.924 45.384 1.00 22.31 ATOM 201 CG2 ILE A 481 2.995 25.831 45.266 1.00 22.13 ATOM 202 CD1 ILE A 481 5.445 27.406 43.961 1.00 22.27 ATOM 203 N TYR A 482 3.964 22.669 46.619 1.00 22.43 ATOM 204 CA TYR A 482 3.137 21.496 46.908 1.00 23.64 ATOM 205 C TYR A 482 3.135 21.162 48.409 1.00 25.54 ATOM 206 O TYR A 482 2.067 21.025 49.010 1.00 25.12 ATOM 207 CB TYR A 482 3.598 20.272 46.107 1.00 22.64 ATOM 208 CG TYR A 482 2.983 18.989 46.599 1.00 22.87 ATOM 209 CD1 TYR A 482 1.637 18.711 46.373 1.00 22.27 ATOM 210 CD2 TYR A 482 3.733 18.065 47.328 1.00 22.93 ATOM 211 CE1 TYR A 482 1.061 17.543 46.835 1.00 22.91 ATOM 212 CE2 TYR A 482 3.165 16.888 47.795 1.00 23.38 ATOM 213 CZ TYR A 482 1.829 16.635 47.550 1.00 23.39 ATOM 214 OH TYR A 482 1.256 15.472 48.008 1.00 24.81 ATOM 215 N ASN A 483 4.328 21.044 48.994 1.00 27.26 ATOM 216 CA ASN A 483 4.478 20.685 50.419 1.00 29.83 ATOM 217 C ASN A 483 3.792 21.656 51.383 1.00 32.42 ATOM 218 O ASN A 483 3.139 21.216 52.338 1.00 33.00 ATOM 219 CB ASN A 483 5.959 20.539 50.804 1.00 30.11 ATOM 220 CG ASN A 483 6.589 19.272 50.260 1.00 29.87 ATOM 221 OD1 ASN A 483 5.915 18.265 50.038 1.00 32.39 ATOM 222 ND2 ASN A 483 7.899 19.310 50.055 1.00 30.96 ATOM 223 N LYS A 484 3.932 22.956 51.129 1.00 34.40 ATOM 224 CA LYS A 484 3.280 23.990 51.946 1.00 38.54 ATOM 225 C LYS A 484 1.757 23.891 51.898 1.00 41.69 ATOM 226 O LYS A 484 1.091 23.981 52.927 1.00 40.85 ATOM 227 CB LYS A 484 3.712 25.388 51.490 1.00 40.07 ATOM 228 CG LYS A 484 3.033 26.534 52.239 1.00 41.39 ATOM 229 CD LYS A 484 3.776 27.856 52.096 1.00 42.53 ATOM 230 CE LYS A 484 5.095 27.864 52.857 1.00 43.53 ATOM 231 NZ LYS A 484 5.514 29.239 53.243 1.00 43.41 ATOM 232 N HIS A 485 1.224 23.720 50.692 1.00 45.10 ATOM 233 CA HIS A 485 -0.218 23.604 50.479 1.00 48.46 ATOM 234 C HIS A 485 -0.747 22.279 51.041 1.00 48.48 ATOM 235 O HIS A 485 -1.883 22.202 51.505 1.00 50.07 ATOM 236 CB HIS A 485 -0.541 23.724 48.984 1.00 51.41 ATOM 237 CG HIS A 485 -1.912 24.247 48.700 1.00 56.25 ATOM 238 ND1 HIS A 485 -3.022 23.432 48.632 1.00 57.83 ATOM 239 CD2 HIS A 485 -2.352 25.505 48.459 1.00 58.47 ATOM 240 CE1 HIS A 485 -4.088 24.166 48.366 1.00 59.00 ATOM 241 NE2 HIS A 485 -3.709 25.427 48.256 1.00 60.37 ATOM 242 N ASN A 486 0.091 21.248 50.990 1.00 48.56 ATOM 243 CA ASN A 486 -0.216 19.936 51.539 1.00 49.62 ATOM 244 C ASN A 486 0.066 19.952 53.047 1.00 49.72 ATOM 245 O ASN A 486 0.186 18.908 53.692 1.00 48.70 ATOM 246 CB ASN A 486 0.651 18.894 50.821 1.00 50.73 ATOM 247 CG ASN A 486 0.158 17.478 50.992 1.00 51.83 ATOM 248 OD1 ASN A 486 -1.033 17.230 51.178 1.00 53.35 ATOM 249 ND2 ASN A 486 1.084 16.527 50.905 1.00 51.26 ATOM 250 C1 EDO A 509 17.870 29.964 40.398 1.00 28.94 ATOM 251 O1 EDO A 509 19.166 30.362 39.971 1.00 27.90 ATOM 252 C2 EDO A 509 17.077 31.183 40.826 1.00 29.76 ATOM 253 O2 EDO A 509 17.533 31.560 42.123 1.00 31.17 TER