HEADER OXIDOREDUCTASE 31-DEC-69 5JNL TITLE Structure of Plasmodium falciparum DXR in complex with a TITLE 2 beta-substituted fosmidomycin analogue, LC54 and manganese COMPND MOL_ID: 1; COMPND 2 MOLECULE: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, COMPND 3 apicoplastic; COMPND 4 CHAIN: A, B; COMPND 5 EC: 1.1.1.267; COMPND 6 UNP residues ; COMPND 7 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 1.60 ANGSTORMS DBREF 5JNL B 75 488 UNP Q8IKG4 DXR_PLAF7 75 488 SEQRES 1 B 30 SER GLU ASN SER GLU ASP LEU MET LYS GLN ILE LEU GLN SEQRES 2 B 30 ILE HIS SER TRP ALA LYS ASP LYS ALA THR ASP ILE TYR SEQRES 3 B 30 ASN LYS HIS ASN ATOM 1 N SER B 457 5.411 10.128 -35.394 1.00 24.65 ATOM 2 CA SER B 457 6.446 10.796 -36.183 1.00 26.75 ATOM 3 C SER B 457 7.654 11.178 -35.327 1.00 28.33 ATOM 4 O SER B 457 7.496 11.634 -34.198 1.00 28.37 ATOM 5 CB SER B 457 5.885 12.066 -36.821 1.00 26.77 ATOM 6 OG SER B 457 4.803 11.777 -37.684 1.00 27.73 ATOM 7 N GLU B 458 8.850 10.983 -35.878 1.00 31.74 ATOM 8 CA GLU B 458 10.099 11.340 -35.203 1.00 35.51 ATOM 9 C GLU B 458 10.412 12.835 -35.331 1.00 34.23 ATOM 10 O GLU B 458 10.928 13.441 -34.388 1.00 35.16 ATOM 11 CB GLU B 458 11.269 10.507 -35.749 1.00 38.66 ATOM 12 CG GLU B 458 11.176 9.013 -35.451 1.00 42.48 ATOM 13 CD GLU B 458 11.462 8.647 -33.999 1.00 46.22 ATOM 14 OE1 GLU B 458 11.758 9.544 -33.175 1.00 49.45 ATOM 15 OE2 GLU B 458 11.396 7.438 -33.676 1.00 49.74 ATOM 16 N ASN B 459 10.101 13.421 -36.486 1.00 33.60 ATOM 17 CA ASN B 459 10.318 14.854 -36.718 1.00 34.24 ATOM 18 C ASN B 459 9.246 15.667 -35.984 1.00 33.86 ATOM 19 O ASN B 459 8.058 15.346 -36.068 1.00 32.03 ATOM 20 CB ASN B 459 10.303 15.157 -38.222 1.00 34.81 ATOM 21 CG ASN B 459 10.467 16.631 -38.529 1.00 36.08 ATOM 22 OD1 ASN B 459 9.499 17.388 -38.516 1.00 37.07 ATOM 23 ND2 ASN B 459 11.695 17.044 -38.825 1.00 37.48 ATOM 24 N SER B 460 9.666 16.723 -35.288 1.00 33.41 ATOM 25 CA SER B 460 8.755 17.496 -34.434 1.00 33.06 ATOM 26 C SER B 460 7.691 18.250 -35.243 1.00 32.69 ATOM 27 O SER B 460 6.547 18.337 -34.809 1.00 30.77 ATOM 28 CB SER B 460 9.524 18.462 -33.522 1.00 34.27 ATOM 29 OG SER B 460 9.975 19.601 -34.228 1.00 35.66 ATOM 30 N GLU B 461 8.068 18.782 -36.409 1.00 32.50 ATOM 31 CA GLU B 461 7.107 19.444 -37.303 1.00 32.47 ATOM 32 C GLU B 461 6.109 18.450 -37.892 1.00 30.03 ATOM 33 O GLU B 461 4.917 18.759 -37.985 1.00 29.60 ATOM 34 CB GLU B 461 7.809 20.203 -38.433 1.00 35.52 ATOM 35 CG GLU B 461 8.635 21.388 -37.955 1.00 38.03 ATOM 36 CD GLU B 461 9.409 22.067 -39.072 1.00 40.20 ATOM 37 OE1 GLU B 461 10.417 22.733 -38.765 1.00 42.31 ATOM 38 OE2 GLU B 461 9.014 21.940 -40.250 1.00 42.29 ATOM 39 N ASP B 462 6.591 17.269 -38.285 1.00 27.37 ATOM 40 CA ASP B 462 5.702 16.183 -38.724 1.00 25.73 ATOM 41 C ASP B 462 4.767 15.739 -37.595 1.00 23.67 ATOM 42 O ASP B 462 3.587 15.446 -37.844 1.00 21.97 ATOM 43 CB ASP B 462 6.489 14.967 -39.228 1.00 26.45 ATOM 44 CG ASP B 462 7.193 15.216 -40.563 1.00 27.92 ATOM 45 OD1 ASP B 462 6.831 16.163 -41.290 1.00 29.73 ATOM 46 OD2 ASP B 462 8.107 14.432 -40.888 1.00 28.52 ATOM 47 N LEU B 463 5.294 15.695 -36.370 1.00 21.67 ATOM 48 CA LEU B 463 4.498 15.328 -35.201 1.00 21.29 ATOM 49 C LEU B 463 3.377 16.326 -34.919 1.00 21.86 ATOM 50 O LEU B 463 2.245 15.913 -34.652 1.00 20.17 ATOM 51 CB LEU B 463 5.390 15.170 -33.964 1.00 20.93 ATOM 52 CG LEU B 463 4.734 14.744 -32.643 1.00 20.39 ATOM 53 CD1 LEU B 463 3.883 13.496 -32.810 1.00 20.54 ATOM 54 CD2 LEU B 463 5.808 14.516 -31.592 1.00 20.08 ATOM 55 N MET B 464 3.684 17.624 -34.970 1.00 23.49 ATOM 56 CA MET B 464 2.654 18.661 -34.791 1.00 25.02 ATOM 57 C MET B 464 1.536 18.512 -35.833 1.00 24.11 ATOM 58 O MET B 464 0.354 18.605 -35.496 1.00 22.77 ATOM 59 CB MET B 464 3.247 20.081 -34.848 1.00 27.74 ATOM 60 CG MET B 464 2.221 21.193 -34.599 1.00 31.22 ATOM 61 SD MET B 464 2.896 22.861 -34.373 1.00 37.87 ATOM 62 CE MET B 464 3.810 23.072 -35.903 1.00 36.06 ATOM 63 N LYS B 465 1.917 18.286 -37.091 1.00 24.08 ATOM 64 CA LYS B 465 0.936 18.121 -38.176 1.00 23.48 ATOM 65 C LYS B 465 0.060 16.887 -37.963 1.00 21.96 ATOM 66 O LYS B 465 -1.141 16.902 -38.265 1.00 21.49 ATOM 67 CB LYS B 465 1.632 18.049 -39.538 1.00 26.15 ATOM 68 CG LYS B 465 2.248 19.368 -39.974 1.00 28.18 ATOM 69 CD LYS B 465 3.217 19.172 -41.132 1.00 30.59 ATOM 70 CE LYS B 465 3.724 20.501 -41.664 1.00 32.07 ATOM 71 NZ LYS B 465 4.897 20.318 -42.566 1.00 33.30 ATOM 72 N GLN B 466 0.671 15.833 -37.428 1.00 19.54 ATOM 73 CA GLN B 466 -0.023 14.593 -37.116 1.00 18.77 ATOM 74 C GLN B 466 -1.062 14.809 -36.008 1.00 17.16 ATOM 75 O GLN B 466 -2.208 14.364 -36.116 1.00 16.17 ATOM 76 CB GLN B 466 1.001 13.550 -36.701 1.00 19.51 ATOM 77 CG GLN B 466 0.476 12.153 -36.562 1.00 20.15 ATOM 78 CD GLN B 466 1.588 11.136 -36.393 1.00 20.30 ATOM 79 OE1 GLN B 466 2.726 11.460 -36.005 1.00 20.93 ATOM 80 NE2 GLN B 466 1.262 9.890 -36.667 1.00 20.46 ATOM 81 N ILE B 467 -0.659 15.521 -34.960 1.00 16.47 ATOM 82 CA ILE B 467 -1.576 15.874 -33.876 1.00 15.98 ATOM 83 C ILE B 467 -2.766 16.678 -34.401 1.00 16.77 ATOM 84 O ILE B 467 -3.917 16.360 -34.091 1.00 15.42 ATOM 85 CB ILE B 467 -0.834 16.630 -32.745 1.00 15.96 ATOM 86 CG1 ILE B 467 0.081 15.652 -32.004 1.00 16.27 ATOM 87 CG2 ILE B 467 -1.819 17.286 -31.779 1.00 15.93 ATOM 88 CD1 ILE B 467 1.197 16.305 -31.212 1.00 16.52 ATOM 89 N LEU B 468 -2.483 17.706 -35.195 1.00 18.00 ATOM 90 CA LEU B 468 -3.535 18.541 -35.774 1.00 19.67 ATOM 91 C LEU B 468 -4.481 17.743 -36.676 1.00 18.69 ATOM 92 O LEU B 468 -5.699 17.930 -36.613 1.00 18.73 ATOM 93 CB LEU B 468 -2.930 19.725 -36.525 1.00 21.26 ATOM 94 CG LEU B 468 -2.233 20.739 -35.610 1.00 23.12 ATOM 95 CD1 LEU B 468 -1.274 21.604 -36.415 1.00 24.04 ATOM 96 CD2 LEU B 468 -3.244 21.590 -34.854 1.00 24.74 ATOM 97 N GLN B 469 -3.927 16.844 -37.489 1.00 19.14 ATOM 98 CA GLN B 469 -4.738 15.968 -38.349 1.00 19.91 ATOM 99 C GLN B 469 -5.681 15.074 -37.537 1.00 17.90 ATOM 100 O GLN B 469 -6.859 14.940 -37.879 1.00 16.93 ATOM 101 CB GLN B 469 -3.845 15.117 -39.267 1.00 22.59 ATOM 102 CG GLN B 469 -4.594 14.134 -40.178 1.00 25.94 ATOM 103 CD GLN B 469 -4.558 12.684 -39.697 1.00 29.05 ATOM 104 OE1 GLN B 469 -3.490 12.132 -39.417 1.00 34.72 ATOM 105 NE2 GLN B 469 -5.724 12.049 -39.633 1.00 31.95 ATOM 106 N ILE B 470 -5.165 14.482 -36.460 1.00 15.94 ATOM 107 CA ILE B 470 -5.941 13.558 -35.625 1.00 15.04 ATOM 108 C ILE B 470 -7.010 14.335 -34.844 1.00 15.03 ATOM 109 O ILE B 470 -8.142 13.854 -34.681 1.00 14.66 ATOM 110 CB ILE B 470 -5.008 12.738 -34.699 1.00 14.65 ATOM 111 CG1 ILE B 470 -4.125 11.810 -35.548 1.00 14.53 ATOM 112 CG2 ILE B 470 -5.793 11.906 -33.689 1.00 14.47 ATOM 113 CD1 ILE B 470 -2.954 11.203 -34.801 1.00 14.62 ATOM 114 N HIS B 471 -6.645 15.534 -34.388 1.00 15.02 ATOM 115 CA HIS B 471 -7.583 16.431 -33.711 1.00 15.55 ATOM 116 C HIS B 471 -8.756 16.763 -34.628 1.00 16.48 ATOM 117 O HIS B 471 -9.920 16.624 -34.242 1.00 16.39 ATOM 118 CB HIS B 471 -6.852 17.698 -33.262 1.00 15.87 ATOM 119 CG HIS B 471 -7.734 18.718 -32.615 1.00 15.74 ATOM 120 ND1 HIS B 471 -8.071 18.666 -31.281 1.00 15.89 ATOM 121 CD2 HIS B 471 -8.324 19.831 -33.110 1.00 16.22 ATOM 122 CE1 HIS B 471 -8.845 19.694 -30.984 1.00 15.94 ATOM 123 NE2 HIS B 471 -9.010 20.420 -32.076 1.00 16.29 ATOM 124 N SER B 472 -8.446 17.162 -35.856 1.00 17.46 ATOM 125 CA SER B 472 -9.493 17.477 -36.839 1.00 18.32 ATOM 126 C SER B 472 -10.365 16.253 -37.162 1.00 17.91 ATOM 127 O SER B 472 -11.603 16.358 -37.234 1.00 18.01 ATOM 128 CB SER B 472 -8.870 18.059 -38.112 1.00 19.60 ATOM 129 OG SER B 472 -9.824 18.111 -39.151 1.00 23.11 ATOM 130 N TRP B 473 -9.725 15.104 -37.359 1.00 17.15 ATOM 131 CA TRP B 473 -10.431 13.847 -37.616 1.00 17.22 ATOM 132 C TRP B 473 -11.427 13.528 -36.491 1.00 17.21 ATOM 133 O TRP B 473 -12.579 13.172 -36.751 1.00 17.26 ATOM 134 CB TRP B 473 -9.446 12.664 -37.798 1.00 17.74 ATOM 135 CG TRP B 473 -10.148 11.348 -37.774 1.00 18.04 ATOM 136 CD1 TRP B 473 -10.746 10.717 -38.837 1.00 18.78 ATOM 137 CD2 TRP B 473 -10.407 10.529 -36.629 1.00 18.29 ATOM 138 NE1 TRP B 473 -11.338 9.558 -38.422 1.00 18.76 ATOM 139 CE2 TRP B 473 -11.154 9.417 -37.071 1.00 18.70 ATOM 140 CE3 TRP B 473 -10.069 10.617 -35.274 1.00 17.61 ATOM 141 CZ2 TRP B 473 -11.564 8.403 -36.207 1.00 18.74 ATOM 142 CZ3 TRP B 473 -10.491 9.620 -34.418 1.00 18.07 ATOM 143 CH2 TRP B 473 -11.234 8.528 -34.884 1.00 18.21 ATOM 144 N ALA B 474 -10.975 13.673 -35.243 1.00 15.96 ATOM 145 CA ALA B 474 -11.778 13.286 -34.092 1.00 15.87 ATOM 146 C ALA B 474 -12.959 14.236 -33.871 1.00 16.15 ATOM 147 O ALA B 474 -14.042 13.787 -33.498 1.00 17.00 ATOM 148 CB ALA B 474 -10.908 13.193 -32.840 1.00 15.32 ATOM 149 N LYS B 475 -12.761 15.530 -34.103 1.00 17.06 ATOM 150 CA LYS B 475 -13.884 16.482 -34.073 1.00 18.12 ATOM 151 C LYS B 475 -14.924 16.133 -35.139 1.00 18.69 ATOM 152 O LYS B 475 -16.126 16.113 -34.856 1.00 17.94 ATOM 153 CB LYS B 475 -13.410 17.917 -34.277 1.00 19.10 ATOM 154 CG LYS B 475 -12.579 18.469 -33.128 1.00 19.80 ATOM 155 CD LYS B 475 -12.502 19.988 -33.138 1.00 21.81 ATOM 156 CE LYS B 475 -11.969 20.544 -34.452 1.00 23.40 ATOM 157 NZ LYS B 475 -11.854 22.031 -34.445 1.00 24.73 ATOM 158 N ASP B 476 -14.453 15.862 -36.358 1.00 18.97 ATOM 159 CA ASP B 476 -15.350 15.489 -37.464 1.00 19.72 ATOM 160 C ASP B 476 -16.067 14.173 -37.202 1.00 19.46 ATOM 161 O ASP B 476 -17.255 14.053 -37.505 1.00 19.81 ATOM 162 CB ASP B 476 -14.599 15.407 -38.804 1.00 21.59 ATOM 163 CG ASP B 476 -14.129 16.761 -39.310 1.00 23.23 ATOM 164 OD1 ASP B 476 -14.570 17.819 -38.803 1.00 26.53 ATOM 165 OD2 ASP B 476 -13.308 16.761 -40.242 1.00 26.42 ATOM 166 N LYS B 477 -15.368 13.196 -36.624 1.00 18.87 ATOM 167 CA LYS B 477 -15.987 11.915 -36.295 1.00 19.29 ATOM 168 C LYS B 477 -17.080 12.068 -35.233 1.00 19.07 ATOM 169 O LYS B 477 -18.148 11.474 -35.370 1.00 18.42 ATOM 170 CB LYS B 477 -14.941 10.890 -35.847 1.00 20.34 ATOM 171 CG LYS B 477 -15.493 9.518 -35.472 1.00 21.87 ATOM 172 CD LYS B 477 -16.114 8.742 -36.630 1.00 24.17 ATOM 173 CE LYS B 477 -15.080 8.223 -37.605 1.00 26.05 ATOM 174 NZ LYS B 477 -15.608 7.017 -38.328 1.00 27.01 ATOM 175 N ALA B 478 -16.814 12.867 -34.192 1.00 17.65 ATOM 176 CA ALA B 478 -17.817 13.144 -33.162 1.00 17.76 ATOM 177 C ALA B 478 -19.053 13.806 -33.777 1.00 19.24 ATOM 178 O ALA B 478 -20.186 13.403 -33.499 1.00 19.80 ATOM 179 CB ALA B 478 -17.235 14.025 -32.060 1.00 17.54 ATOM 180 N THR B 479 -18.805 14.803 -34.624 1.00 20.15 ATOM 181 CA THR B 479 -19.854 15.553 -35.309 1.00 21.90 ATOM 182 C THR B 479 -20.698 14.633 -36.199 1.00 23.66 ATOM 183 O THR B 479 -21.928 14.741 -36.211 1.00 23.92 ATOM 184 CB THR B 479 -19.248 16.719 -36.127 1.00 22.15 ATOM 185 OG1 THR B 479 -18.649 17.661 -35.228 1.00 21.68 ATOM 186 CG2 THR B 479 -20.314 17.451 -36.973 1.00 22.89 ATOM 187 N ASP B 480 -20.043 13.731 -36.929 1.00 24.63 ATOM 188 CA ASP B 480 -20.759 12.760 -37.781 1.00 26.90 ATOM 189 C ASP B 480 -21.618 11.793 -36.972 1.00 26.69 ATOM 190 O ASP B 480 -22.746 11.477 -37.375 1.00 26.61 ATOM 191 CB ASP B 480 -19.785 11.977 -38.667 1.00 28.89 ATOM 192 CG ASP B 480 -19.123 12.847 -39.724 1.00 30.90 ATOM 193 OD1 ASP B 480 -19.420 14.058 -39.813 1.00 34.78 ATOM 194 OD2 ASP B 480 -18.275 12.320 -40.467 1.00 33.55 ATOM 195 N ILE B 481 -21.100 11.331 -35.834 1.00 26.03 ATOM 196 CA ILE B 481 -21.867 10.458 -34.934 1.00 26.25 ATOM 197 C ILE B 481 -23.126 11.182 -34.434 1.00 27.25 ATOM 198 O ILE B 481 -24.214 10.587 -34.398 1.00 27.92 ATOM 199 CB ILE B 481 -21.004 9.934 -33.752 1.00 25.99 ATOM 200 CG1 ILE B 481 -19.953 8.937 -34.262 1.00 25.89 ATOM 201 CG2 ILE B 481 -21.864 9.262 -32.679 1.00 25.97 ATOM 202 CD1 ILE B 481 -18.796 8.715 -33.304 1.00 25.93 ATOM 203 N TYR B 482 -22.983 12.456 -34.063 1.00 26.66 ATOM 204 CA TYR B 482 -24.134 13.271 -33.662 1.00 27.09 ATOM 205 C TYR B 482 -25.150 13.384 -34.806 1.00 29.22 ATOM 206 O TYR B 482 -26.336 13.106 -34.612 1.00 29.56 ATOM 207 CB TYR B 482 -23.703 14.668 -33.185 1.00 26.02 ATOM 208 CG TYR B 482 -24.854 15.644 -33.089 1.00 25.37 ATOM 209 CD1 TYR B 482 -25.805 15.526 -32.078 1.00 25.45 ATOM 210 CD2 TYR B 482 -25.006 16.670 -34.023 1.00 25.59 ATOM 211 CE1 TYR B 482 -26.870 16.409 -31.992 1.00 24.92 ATOM 212 CE2 TYR B 482 -26.067 17.558 -33.951 1.00 25.48 ATOM 213 CZ TYR B 482 -26.998 17.421 -32.935 1.00 25.94 ATOM 214 OH TYR B 482 -28.052 18.298 -32.860 1.00 25.27 ATOM 215 N ASN B 483 -24.673 13.781 -35.984 1.00 30.61 ATOM 216 CA ASN B 483 -25.533 13.945 -37.173 1.00 34.09 ATOM 217 C ASN B 483 -26.281 12.670 -37.593 1.00 37.51 ATOM 218 O ASN B 483 -27.419 12.755 -38.053 1.00 38.67 ATOM 219 CB ASN B 483 -24.725 14.464 -38.368 1.00 33.54 ATOM 220 CG ASN B 483 -24.291 15.911 -38.213 1.00 33.98 ATOM 221 OD1 ASN B 483 -24.901 16.695 -37.482 1.00 34.16 ATOM 222 ND2 ASN B 483 -23.238 16.280 -38.935 1.00 34.62 ATOM 223 N LYS B 484 -25.650 11.507 -37.444 1.00 41.68 ATOM 224 CA LYS B 484 -26.327 10.225 -37.706 1.00 45.46 ATOM 225 C LYS B 484 -27.511 10.000 -36.760 1.00 49.49 ATOM 226 O LYS B 484 -28.618 9.705 -37.211 1.00 49.84 ATOM 227 CB LYS B 484 -25.355 9.034 -37.618 1.00 46.76 ATOM 228 CG LYS B 484 -24.829 8.542 -38.960 1.00 47.82 ATOM 229 CD LYS B 484 -23.824 9.498 -39.586 1.00 48.58 ATOM 230 CE LYS B 484 -23.479 9.071 -41.004 1.00 49.18 ATOM 231 NZ LYS B 484 -22.411 9.921 -41.599 1.00 50.26 ATOM 232 N HIS B 485 -27.269 10.150 -35.460 1.00 53.55 ATOM 233 CA HIS B 485 -28.301 9.939 -34.434 1.00 58.24 ATOM 234 C HIS B 485 -29.380 11.040 -34.393 1.00 59.60 ATOM 235 O HIS B 485 -30.481 10.799 -33.896 1.00 61.85 ATOM 236 CB HIS B 485 -27.646 9.791 -33.053 1.00 60.34 ATOM 237 CG HIS B 485 -28.575 9.300 -31.984 1.00 63.41 ATOM 238 ND1 HIS B 485 -29.068 10.122 -30.993 1.00 65.74 ATOM 239 CD2 HIS B 485 -29.101 8.075 -31.752 1.00 65.54 ATOM 240 CE1 HIS B 485 -29.856 9.423 -30.195 1.00 65.95 ATOM 241 NE2 HIS B 485 -29.894 8.179 -30.634 1.00 66.09 ATOM 242 N ASN B 486 -29.073 12.231 -34.911 1.00 61.47 ATOM 243 CA ASN B 486 -30.014 13.356 -34.884 1.00 63.42 ATOM 244 C ASN B 486 -31.153 13.176 -35.891 1.00 64.06 ATOM 245 O ASN B 486 -30.940 13.201 -37.104 1.00 65.55 ATOM 246 CB ASN B 486 -29.278 14.674 -35.152 1.00 64.17 ATOM 247 CG ASN B 486 -30.122 15.893 -34.822 1.00 64.92 ATOM 248 OD1 ASN B 486 -30.649 16.009 -33.717 1.00 66.56 ATOM 249 ND2 ASN B 486 -30.247 16.813 -35.773 1.00 66.37 ATOM 250 C1 EDO B 505 -1.051 12.780 -26.911 1.00 27.44 ATOM 251 O1 EDO B 505 -2.084 12.170 -27.682 1.00 25.25 ATOM 252 C2 EDO B 505 0.211 12.834 -27.748 1.00 27.87 ATOM 253 O2 EDO B 505 0.530 14.173 -28.171 1.00 27.45 ATOM 254 C1 EDO B 507 -25.504 8.521 -29.000 1.00 46.75 ATOM 255 O1 EDO B 507 -24.380 8.302 -29.861 1.00 46.03 ATOM 256 C2 EDO B 507 -25.706 10.013 -28.759 1.00 46.18 ATOM 257 O2 EDO B 507 -25.622 10.756 -29.983 1.00 47.90 TER