HEADER OXIDOREDUCTASE 01-MAY-16 5JO0 TITLE Structure of Plasmodium falciparum DXR in complex with a TITLE 2 beta-substituted fosmidomycin analogue, LC56 and manganese COMPND MOL_ID: 1; COMPND 2 MOLECULE: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, COMPND 3 apicoplastic; COMPND 4 CHAIN: A, B; COMPND 5 EC: 1.1.1.267; COMPND 6 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 1.80 ANGSTORMS DBREF 5JO0 A 75 488 UNP Q8IKG4 DXR_PLAF7 75 488 SEQRES 1 A 30 SER GLU ASN SER GLU ASP LEU MET LYS GLN ILE LEU GLN SEQRES 2 A 30 ILE HIS SER TRP ALA LYS ASP LYS ALA THR ASP ILE TYR SEQRES 3 A 30 ASN LYS HIS ASN ATOM 1 N SER A 457 24.872 34.149 30.418 1.00 32.07 ATOM 2 CA SER A 457 26.327 33.992 30.331 1.00 34.42 ATOM 3 C SER A 457 26.818 33.942 28.896 1.00 36.19 ATOM 4 O SER A 457 26.193 33.307 28.042 1.00 33.38 ATOM 5 CB SER A 457 26.779 32.709 31.016 1.00 34.81 ATOM 6 OG SER A 457 26.287 32.654 32.333 1.00 37.93 ATOM 7 N GLU A 458 27.946 34.605 28.652 1.00 37.98 ATOM 8 CA GLU A 458 28.609 34.582 27.352 1.00 40.92 ATOM 9 C GLU A 458 29.446 33.328 27.182 1.00 39.07 ATOM 10 O GLU A 458 29.616 32.853 26.072 1.00 38.61 ATOM 11 CB GLU A 458 29.522 35.808 27.179 1.00 44.49 ATOM 12 CG GLU A 458 28.784 37.128 26.980 1.00 48.64 ATOM 13 CD GLU A 458 28.111 37.256 25.617 1.00 52.51 ATOM 14 OE1 GLU A 458 28.201 36.316 24.792 1.00 55.85 ATOM 15 OE2 GLU A 458 27.487 38.313 25.367 1.00 57.32 ATOM 16 N ASN A 459 30.009 32.832 28.277 1.00 38.35 ATOM 17 CA ASN A 459 30.858 31.647 28.246 1.00 38.95 ATOM 18 C ASN A 459 29.961 30.416 28.086 1.00 35.71 ATOM 19 O ASN A 459 28.961 30.299 28.773 1.00 32.13 ATOM 20 CB ASN A 459 31.672 31.563 29.544 1.00 41.96 ATOM 21 CG ASN A 459 32.812 30.573 29.455 1.00 46.48 ATOM 22 OD1 ASN A 459 33.699 30.711 28.617 1.00 50.56 ATOM 23 ND2 ASN A 459 32.805 29.574 30.323 1.00 48.46 ATOM 24 N SER A 460 30.327 29.511 27.185 1.00 33.46 ATOM 25 CA SER A 460 29.546 28.295 26.929 1.00 33.88 ATOM 26 C SER A 460 29.383 27.403 28.169 1.00 30.56 ATOM 27 O SER A 460 28.306 26.867 28.414 1.00 27.79 ATOM 28 CB SER A 460 30.199 27.480 25.814 1.00 34.95 ATOM 29 OG SER A 460 29.338 26.441 25.409 1.00 39.36 ATOM 30 N GLU A 461 30.459 27.247 28.938 1.00 30.73 ATOM 31 CA GLU A 461 30.420 26.419 30.149 1.00 30.26 ATOM 32 C GLU A 461 29.602 27.064 31.271 1.00 28.45 ATOM 33 O GLU A 461 28.856 26.363 31.960 1.00 27.91 ATOM 34 CB GLU A 461 31.832 26.063 30.627 1.00 31.44 ATOM 35 CG GLU A 461 32.579 25.153 29.668 1.00 32.18 ATOM 36 CD GLU A 461 34.039 24.942 30.042 1.00 32.85 ATOM 37 OE1 GLU A 461 34.807 24.528 29.162 1.00 31.45 ATOM 38 OE2 GLU A 461 34.420 25.182 31.207 1.00 32.61 ATOM 39 N ASP A 462 29.709 28.386 31.435 1.00 27.99 ATOM 40 CA ASP A 462 28.902 29.106 32.433 1.00 28.61 ATOM 41 C ASP A 462 27.422 29.033 32.080 1.00 26.06 ATOM 42 O ASP A 462 26.595 28.929 32.967 1.00 24.49 ATOM 43 CB ASP A 462 29.304 30.581 32.567 1.00 30.48 ATOM 44 CG ASP A 462 30.698 30.774 33.140 1.00 34.16 ATOM 45 OD1 ASP A 462 31.253 29.838 33.756 1.00 38.01 ATOM 46 OD2 ASP A 462 31.250 31.878 32.966 1.00 37.37 ATOM 47 N LEU A 463 27.103 29.078 30.785 1.00 25.17 ATOM 48 CA LEU A 463 25.715 29.001 30.337 1.00 23.57 ATOM 49 C LEU A 463 25.095 27.641 30.656 1.00 23.11 ATOM 50 O LEU A 463 23.967 27.584 31.131 1.00 21.06 ATOM 51 CB LEU A 463 25.606 29.300 28.839 1.00 24.04 ATOM 52 CG LEU A 463 24.212 29.376 28.209 1.00 24.04 ATOM 53 CD1 LEU A 463 23.324 30.382 28.935 1.00 24.44 ATOM 54 CD2 LEU A 463 24.319 29.727 26.732 1.00 25.18 ATOM 55 N MET A 464 25.814 26.552 30.390 1.00 23.40 ATOM 56 CA MET A 464 25.311 25.222 30.744 1.00 26.60 ATOM 57 C MET A 464 25.058 25.124 32.257 1.00 24.08 ATOM 58 O MET A 464 24.019 24.639 32.674 1.00 22.29 ATOM 59 CB MET A 464 26.268 24.114 30.284 1.00 30.31 ATOM 60 CG MET A 464 25.701 22.700 30.388 1.00 36.02 ATOM 61 SD MET A 464 24.269 22.395 29.312 1.00 46.28 ATOM 62 CE MET A 464 22.904 22.503 30.463 1.00 44.81 ATOM 63 N LYS A 465 25.997 25.614 33.067 1.00 24.03 ATOM 64 CA LYS A 465 25.820 25.638 34.519 1.00 23.67 ATOM 65 C LYS A 465 24.646 26.509 34.944 1.00 21.58 ATOM 66 O LYS A 465 23.915 26.154 35.854 1.00 20.15 ATOM 67 CB LYS A 465 27.115 26.050 35.230 1.00 26.69 ATOM 68 CG LYS A 465 28.173 24.952 35.143 1.00 29.36 ATOM 69 CD LYS A 465 29.583 25.440 35.454 1.00 33.03 ATOM 70 CE LYS A 465 29.773 25.703 36.935 1.00 36.21 ATOM 71 NZ LYS A 465 31.136 26.244 37.229 1.00 38.65 ATOM 72 N GLN A 466 24.451 27.627 34.253 1.00 21.01 ATOM 73 CA GLN A 466 23.335 28.530 34.517 1.00 21.07 ATOM 74 C GLN A 466 21.989 27.833 34.260 1.00 19.42 ATOM 75 O GLN A 466 21.065 27.900 35.082 1.00 19.28 ATOM 76 CB GLN A 466 23.495 29.770 33.634 1.00 23.20 ATOM 77 CG GLN A 466 22.604 30.924 33.954 1.00 24.96 ATOM 78 CD GLN A 466 23.028 32.202 33.247 1.00 25.40 ATOM 79 OE1 GLN A 466 23.720 32.184 32.219 1.00 25.72 ATOM 80 NE2 GLN A 466 22.602 33.319 33.793 1.00 26.64 ATOM 81 N ILE A 467 21.902 27.137 33.134 1.00 19.33 ATOM 82 CA ILE A 467 20.707 26.383 32.774 1.00 19.14 ATOM 83 C ILE A 467 20.407 25.325 33.844 1.00 19.14 ATOM 84 O ILE A 467 19.277 25.213 34.300 1.00 18.11 ATOM 85 CB ILE A 467 20.855 25.742 31.386 1.00 19.69 ATOM 86 CG1 ILE A 467 20.809 26.826 30.304 1.00 20.19 ATOM 87 CG2 ILE A 467 19.764 24.700 31.140 1.00 20.09 ATOM 88 CD1 ILE A 467 21.389 26.386 28.986 1.00 20.14 ATOM 89 N LEU A 468 21.426 24.556 34.228 1.00 20.14 ATOM 90 CA LEU A 468 21.275 23.534 35.253 1.00 20.99 ATOM 91 C LEU A 468 20.859 24.127 36.593 1.00 20.07 ATOM 92 O LEU A 468 20.017 23.553 37.272 1.00 20.09 ATOM 93 CB LEU A 468 22.558 22.703 35.410 1.00 22.55 ATOM 94 CG LEU A 468 22.925 21.786 34.232 1.00 24.94 ATOM 95 CD1 LEU A 468 24.272 21.089 34.441 1.00 26.32 ATOM 96 CD2 LEU A 468 21.848 20.762 33.935 1.00 26.21 ATOM 97 N GLN A 469 21.443 25.262 36.974 1.00 20.87 ATOM 98 CA GLN A 469 21.117 25.902 38.255 1.00 22.91 ATOM 99 C GLN A 469 19.651 26.319 38.271 1.00 20.70 ATOM 100 O GLN A 469 18.963 26.087 39.254 1.00 20.04 ATOM 101 CB GLN A 469 22.010 27.128 38.518 1.00 26.27 ATOM 102 CG GLN A 469 21.915 27.724 39.925 1.00 30.77 ATOM 103 CD GLN A 469 20.811 28.767 40.139 1.00 35.53 ATOM 104 OE1 GLN A 469 20.190 28.812 41.211 1.00 41.46 ATOM 105 NE2 GLN A 469 20.584 29.628 39.149 1.00 37.63 ATOM 106 N ILE A 470 19.200 26.942 37.180 1.00 19.66 ATOM 107 CA ILE A 470 17.834 27.449 37.071 1.00 19.27 ATOM 108 C ILE A 470 16.828 26.305 37.028 1.00 19.17 ATOM 109 O ILE A 470 15.774 26.383 37.664 1.00 19.78 ATOM 110 CB ILE A 470 17.684 28.385 35.852 1.00 19.51 ATOM 111 CG1 ILE A 470 18.514 29.650 36.089 1.00 19.87 ATOM 112 CG2 ILE A 470 16.219 28.764 35.618 1.00 19.89 ATOM 113 CD1 ILE A 470 18.816 30.444 34.848 1.00 19.84 ATOM 114 N HIS A 471 17.160 25.247 36.281 1.00 18.67 ATOM 115 CA HIS A 471 16.373 24.024 36.257 1.00 19.06 ATOM 116 C HIS A 471 16.150 23.491 37.673 1.00 19.78 ATOM 117 O HIS A 471 15.011 23.209 38.063 1.00 19.21 ATOM 118 CB HIS A 471 17.073 22.974 35.384 1.00 19.87 ATOM 119 CG HIS A 471 16.359 21.668 35.309 1.00 20.39 ATOM 120 ND1 HIS A 471 15.284 21.456 34.475 1.00 20.83 ATOM 121 CD2 HIS A 471 16.568 20.499 35.961 1.00 21.59 ATOM 122 CE1 HIS A 471 14.855 20.217 34.623 1.00 21.14 ATOM 123 NE2 HIS A 471 15.624 19.614 35.513 1.00 21.22 ATOM 124 N SER A 472 17.242 23.361 38.425 0.50 19.61 ATOM 125 CA SER A 472 17.195 22.876 39.804 0.50 20.62 ATOM 126 C SER A 472 16.377 23.786 40.731 0.50 20.11 ATOM 127 O SER A 472 15.584 23.299 41.537 0.50 20.81 ATOM 128 CB SER A 472 18.618 22.730 40.351 0.50 21.22 ATOM 129 OG SER A 472 18.595 22.315 41.703 0.50 21.86 ATOM 130 N TRP A 473 16.578 25.093 40.602 1.00 20.94 ATOM 131 CA TRP A 473 15.853 26.095 41.402 1.00 20.94 ATOM 132 C TRP A 473 14.341 25.989 41.149 1.00 21.10 ATOM 133 O TRP A 473 13.543 25.936 42.091 1.00 19.85 ATOM 134 CB TRP A 473 16.347 27.515 41.096 1.00 21.91 ATOM 135 CG TRP A 473 15.422 28.541 41.658 1.00 23.60 ATOM 136 CD1 TRP A 473 15.449 29.056 42.919 1.00 24.07 ATOM 137 CD2 TRP A 473 14.284 29.121 41.006 1.00 23.76 ATOM 138 NE1 TRP A 473 14.411 29.941 43.090 1.00 24.69 ATOM 139 CE2 TRP A 473 13.670 29.990 41.939 1.00 24.22 ATOM 140 CE3 TRP A 473 13.719 28.987 39.729 1.00 23.37 ATOM 141 CZ2 TRP A 473 12.527 30.736 41.630 1.00 24.86 ATOM 142 CZ3 TRP A 473 12.572 29.718 39.424 1.00 23.36 ATOM 143 CH2 TRP A 473 11.987 30.579 40.371 1.00 24.39 ATOM 144 N ALA A 474 13.974 25.934 39.868 1.00 20.43 ATOM 145 CA ALA A 474 12.573 25.831 39.461 1.00 20.66 ATOM 146 C ALA A 474 11.895 24.558 39.963 1.00 20.85 ATOM 147 O ALA A 474 10.747 24.611 40.417 1.00 21.87 ATOM 148 CB ALA A 474 12.450 25.935 37.953 1.00 20.24 ATOM 149 N LYS A 475 12.592 23.428 39.917 1.00 22.26 ATOM 150 CA LYS A 475 12.040 22.187 40.461 1.00 23.50 ATOM 151 C LYS A 475 11.820 22.293 41.975 1.00 23.84 ATOM 152 O LYS A 475 10.789 21.844 42.486 1.00 24.10 ATOM 153 CB LYS A 475 12.929 20.986 40.159 1.00 24.68 ATOM 154 CG LYS A 475 12.921 20.575 38.697 1.00 25.73 ATOM 155 CD LYS A 475 13.447 19.173 38.509 1.00 28.25 ATOM 156 CE LYS A 475 14.871 19.014 39.020 1.00 29.40 ATOM 157 NZ LYS A 475 15.254 17.583 38.917 1.00 32.03 ATOM 158 N ASP A 476 12.797 22.858 42.677 1.00 24.55 ATOM 159 CA ASP A 476 12.675 23.105 44.121 1.00 26.36 ATOM 160 C ASP A 476 11.545 24.060 44.460 1.00 25.40 ATOM 161 O ASP A 476 10.802 23.815 45.410 1.00 26.11 ATOM 162 CB ASP A 476 13.976 23.668 44.704 1.00 28.29 ATOM 163 CG ASP A 476 15.085 22.639 44.773 1.00 30.65 ATOM 164 OD1 ASP A 476 14.823 21.430 44.603 1.00 33.51 ATOM 165 OD2 ASP A 476 16.235 23.055 45.005 1.00 33.62 ATOM 166 N LYS A 477 11.422 25.140 43.692 1.00 25.38 ATOM 167 CA LYS A 477 10.376 26.138 43.919 1.00 25.29 ATOM 168 C LYS A 477 8.989 25.512 43.745 1.00 26.43 ATOM 169 O LYS A 477 8.082 25.728 44.576 1.00 25.71 ATOM 170 CB LYS A 477 10.575 27.346 42.992 1.00 24.77 ATOM 171 CG LYS A 477 9.653 28.539 43.238 1.00 26.12 ATOM 172 CD LYS A 477 9.897 29.248 44.572 1.00 25.99 ATOM 173 CE LYS A 477 8.759 30.213 44.851 1.00 27.20 ATOM 174 NZ LYS A 477 9.004 31.208 45.941 1.00 27.66 ATOM 175 N ALA A 478 8.828 24.704 42.692 1.00 25.21 ATOM 176 CA ALA A 478 7.578 23.984 42.463 1.00 24.99 ATOM 177 C ALA A 478 7.231 23.070 43.631 1.00 26.15 ATOM 178 O ALA A 478 6.097 23.083 44.116 1.00 25.67 ATOM 179 CB ALA A 478 7.649 23.186 41.169 1.00 24.33 ATOM 180 N THR A 479 8.223 22.298 44.082 1.00 27.43 ATOM 181 CA THR A 479 8.055 21.356 45.191 1.00 29.29 ATOM 182 C THR A 479 7.700 22.070 46.506 1.00 31.87 ATOM 183 O THR A 479 6.862 21.578 47.266 1.00 32.11 ATOM 184 CB THR A 479 9.316 20.479 45.353 1.00 29.07 ATOM 185 OG1 THR A 479 9.534 19.755 44.142 1.00 27.28 ATOM 186 CG2 THR A 479 9.174 19.469 46.505 1.00 30.39 ATOM 187 N ASP A 480 8.323 23.221 46.754 1.00 35.17 ATOM 188 CA ASP A 480 8.032 24.048 47.942 1.00 38.56 ATOM 189 C ASP A 480 6.613 24.614 47.927 1.00 38.65 ATOM 190 O ASP A 480 5.975 24.703 48.974 1.00 38.12 ATOM 191 CB ASP A 480 9.025 25.215 48.068 1.00 39.97 ATOM 192 CG ASP A 480 10.434 24.765 48.453 1.00 42.63 ATOM 193 OD1 ASP A 480 10.646 23.576 48.785 1.00 44.60 ATOM 194 OD2 ASP A 480 11.345 25.621 48.421 1.00 46.10 ATOM 195 N ILE A 481 6.131 25.010 46.746 1.00 37.86 ATOM 196 CA ILE A 481 4.741 25.447 46.592 1.00 36.84 ATOM 197 C ILE A 481 3.802 24.292 46.943 1.00 35.65 ATOM 198 O ILE A 481 2.855 24.485 47.707 1.00 37.60 ATOM 199 CB ILE A 481 4.451 26.006 45.178 1.00 36.94 ATOM 200 CG1 ILE A 481 5.190 27.335 44.977 1.00 36.52 ATOM 201 CG2 ILE A 481 2.948 26.213 44.960 1.00 36.99 ATOM 202 CD1 ILE A 481 5.423 27.714 43.529 1.00 36.65 ATOM 203 N TYR A 482 4.074 23.098 46.416 1.00 33.20 ATOM 204 CA TYR A 482 3.266 21.931 46.745 1.00 34.71 ATOM 205 C TYR A 482 3.255 21.654 48.261 1.00 37.42 ATOM 206 O TYR A 482 2.203 21.354 48.824 1.00 35.67 ATOM 207 CB TYR A 482 3.732 20.678 45.991 1.00 32.88 ATOM 208 CG TYR A 482 3.109 19.403 46.511 1.00 33.22 ATOM 209 CD1 TYR A 482 1.754 19.132 46.300 1.00 33.08 ATOM 210 CD2 TYR A 482 3.856 18.482 47.248 1.00 33.24 ATOM 211 CE1 TYR A 482 1.173 17.973 46.778 1.00 33.11 ATOM 212 CE2 TYR A 482 3.284 17.315 47.734 1.00 33.84 ATOM 213 CZ TYR A 482 1.936 17.067 47.503 1.00 34.63 ATOM 214 OH TYR A 482 1.348 15.911 47.975 1.00 34.14 ATOM 215 N ASN A 483 4.423 21.744 48.898 1.00 39.48 ATOM 216 CA ASN A 483 4.555 21.438 50.334 1.00 44.15 ATOM 217 C ASN A 483 3.870 22.446 51.264 1.00 46.83 ATOM 218 O ASN A 483 3.350 22.048 52.306 1.00 52.38 ATOM 219 CB ASN A 483 6.030 21.245 50.724 1.00 43.59 ATOM 220 CG ASN A 483 6.594 19.921 50.239 1.00 42.30 ATOM 221 OD1 ASN A 483 5.863 18.952 50.050 1.00 42.43 ATOM 222 ND2 ASN A 483 7.903 19.873 50.040 1.00 43.29 ATOM 223 N LYS A 484 3.852 23.725 50.895 1.00 50.45 ATOM 224 CA LYS A 484 3.079 24.729 51.640 1.00 56.57 ATOM 225 C LYS A 484 1.571 24.448 51.590 1.00 61.16 ATOM 226 O LYS A 484 0.882 24.520 52.610 1.00 62.64 ATOM 227 CB LYS A 484 3.355 26.146 51.122 1.00 58.79 ATOM 228 CG LYS A 484 4.690 26.714 51.576 1.00 62.25 ATOM 229 CD LYS A 484 4.807 28.198 51.258 1.00 64.17 ATOM 230 CE LYS A 484 6.194 28.741 51.593 1.00 66.04 ATOM 231 NZ LYS A 484 6.413 28.902 53.060 1.00 66.82 ATOM 232 N HIS A 485 1.077 24.130 50.398 1.00 63.16 ATOM 233 CA HIS A 485 -0.339 23.828 50.179 1.00 66.70 ATOM 234 C HIS A 485 -0.780 22.504 50.825 1.00 66.22 ATOM 235 O HIS A 485 -1.897 22.402 51.330 1.00 70.12 ATOM 236 CB HIS A 485 -0.627 23.808 48.669 1.00 69.45 ATOM 237 CG HIS A 485 -2.069 23.602 48.321 1.00 74.42 ATOM 238 ND1 HIS A 485 -2.564 22.390 47.886 1.00 76.00 ATOM 239 CD2 HIS A 485 -3.122 24.454 48.337 1.00 75.87 ATOM 240 CE1 HIS A 485 -3.859 22.504 47.653 1.00 77.15 ATOM 241 NE2 HIS A 485 -4.223 23.746 47.919 1.00 77.04 ATOM 242 N ASN A 486 0.101 21.505 50.809 1.00 66.13 ATOM 243 CA ASN A 486 -0.221 20.149 51.261 1.00 66.30 ATOM 244 C ASN A 486 -0.353 20.063 52.789 1.00 66.23 ATOM 245 O ASN A 486 0.636 19.955 53.517 1.00 63.08 ATOM 246 CB ASN A 486 0.849 19.173 50.743 1.00 68.51 ATOM 247 CG ASN A 486 0.536 17.719 51.055 1.00 71.28 ATOM 248 OD1 ASN A 486 -0.625 17.321 51.135 1.00 73.11 ATOM 249 ND2 ASN A 486 1.583 16.910 51.216 1.00 71.28 ATOM 250 C1 EDO A 504 17.721 28.763 27.890 1.00 39.74 ATOM 251 O1 EDO A 504 18.578 28.080 26.982 1.00 38.32 ATOM 252 C2 EDO A 504 16.331 28.942 27.275 1.00 39.85 ATOM 253 O2 EDO A 504 15.315 29.018 28.301 1.00 39.42 TER