HEADER TRANSCRIPTION/DNA 31-DEC-69 5K5J TITLE Homo sapiens CCCTC-binding factor (CTCF) ZnF5-8 and DNA complex TITLE 2 structure in space group P41212 COMPND MOL_ID: 1; COMPND 2 MOLECULE: Transcriptional repressor CTCF; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: unp residues ; COMPND 5 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.29 ANGSTORMS DBREF 5K5J A 378 489 UNP P49711 CTCF_HUMAN 378 489 SEQRES 1 A 25 PRO PHE GLN CYS SER LEU CYS SER TYR ALA SER ARG ASP SEQRES 2 A 25 THR TYR LYS LEU LYS ARG HIS MET ARG THR HIS SER ATOM 1 N PRO A 378 -12.425 20.115 2.692 1.00 90.75 ATOM 2 CA PRO A 378 -13.656 20.763 3.177 1.00 86.17 ATOM 3 C PRO A 378 -14.070 21.987 2.377 1.00 76.27 ATOM 4 O PRO A 378 -15.259 22.325 2.369 1.00 75.95 ATOM 5 CB PRO A 378 -13.311 21.134 4.631 1.00 84.07 ATOM 6 CG PRO A 378 -12.018 20.412 4.943 1.00 91.66 ATOM 7 CD PRO A 378 -11.311 20.282 3.634 1.00 86.97 ATOM 8 N PHE A 379 -13.138 22.668 1.715 1.00 72.76 ATOM 9 CA PHE A 379 -13.451 23.931 1.049 1.00 62.57 ATOM 10 C PHE A 379 -14.065 23.636 -0.313 1.00 68.39 ATOM 11 O PHE A 379 -13.361 23.345 -1.281 1.00 69.18 ATOM 12 CB PHE A 379 -12.201 24.793 0.931 1.00 64.38 ATOM 13 CG PHE A 379 -11.639 25.210 2.255 1.00 81.10 ATOM 14 CD1 PHE A 379 -10.689 24.432 2.893 1.00 73.39 ATOM 15 CD2 PHE A 379 -12.078 26.368 2.875 1.00 71.48 ATOM 16 CE1 PHE A 379 -10.175 24.808 4.119 1.00 84.00 ATOM 17 CE2 PHE A 379 -11.569 26.750 4.099 1.00 80.42 ATOM 18 CZ PHE A 379 -10.616 25.969 4.724 1.00 82.78 ATOM 19 N GLN A 380 -15.389 23.728 -0.388 1.00 57.18 ATOM 20 CA GLN A 380 -16.143 23.384 -1.585 1.00 61.82 ATOM 21 C GLN A 380 -16.569 24.652 -2.312 1.00 55.72 ATOM 22 O GLN A 380 -17.179 25.542 -1.711 1.00 64.42 ATOM 23 CB GLN A 380 -17.367 22.548 -1.212 1.00 60.53 ATOM 24 CG GLN A 380 -18.145 22.034 -2.395 1.00 59.43 ATOM 25 CD GLN A 380 -17.381 20.994 -3.182 1.00 69.93 ATOM 26 OE1 GLN A 380 -16.823 20.054 -2.615 1.00 77.99 ATOM 27 NE2 GLN A 380 -17.349 21.156 -4.498 1.00 70.72 ATOM 28 N CYS A 381 -16.249 24.730 -3.603 1.00 43.99 ATOM 29 CA CYS A 381 -16.628 25.892 -4.398 1.00 42.48 ATOM 30 C CYS A 381 -18.143 26.011 -4.486 1.00 42.62 ATOM 31 O CYS A 381 -18.843 25.032 -4.761 1.00 42.20 ATOM 32 CB CYS A 381 -16.032 25.803 -5.800 1.00 48.50 ATOM 33 SG CYS A 381 -16.441 27.238 -6.818 1.00 46.58 ATOM 34 N SER A 382 -18.647 27.223 -4.265 1.00 39.12 ATOM 35 CA SER A 382 -20.083 27.470 -4.252 1.00 50.24 ATOM 36 C SER A 382 -20.691 27.553 -5.645 1.00 54.20 ATOM 37 O SER A 382 -21.916 27.657 -5.758 1.00 59.61 ATOM 38 CB SER A 382 -20.384 28.763 -3.488 1.00 54.82 ATOM 39 OG SER A 382 -19.757 29.876 -4.102 1.00 65.63 ATOM 40 N LEU A 383 -19.879 27.504 -6.697 1.00 48.71 ATOM 41 CA LEU A 383 -20.356 27.654 -8.067 1.00 52.34 ATOM 42 C LEU A 383 -20.182 26.404 -8.915 1.00 52.17 ATOM 43 O LEU A 383 -21.080 26.058 -9.684 1.00 54.62 ATOM 44 CB LEU A 383 -19.640 28.827 -8.744 1.00 46.97 ATOM 45 CG LEU A 383 -19.978 30.206 -8.180 1.00 55.14 ATOM 46 CD1 LEU A 383 -19.194 31.295 -8.896 1.00 54.56 ATOM 47 CD2 LEU A 383 -21.476 30.459 -8.285 1.00 56.90 ATOM 48 N CYS A 384 -19.053 25.713 -8.786 1.00 49.46 ATOM 49 CA CYS A 384 -18.779 24.513 -9.566 1.00 43.36 ATOM 50 C CYS A 384 -18.428 23.364 -8.629 1.00 51.68 ATOM 51 O CYS A 384 -18.625 23.472 -7.414 1.00 55.58 ATOM 52 CB CYS A 384 -17.653 24.765 -10.570 1.00 38.94 ATOM 53 SG CYS A 384 -16.000 24.688 -9.870 1.00 44.53 ATOM 54 N SER A 385 -17.929 22.256 -9.174 1.00 50.19 ATOM 55 CA SER A 385 -17.633 21.071 -8.379 1.00 56.19 ATOM 56 C SER A 385 -16.227 21.066 -7.788 1.00 49.77 ATOM 57 O SER A 385 -15.839 20.070 -7.169 1.00 54.96 ATOM 58 CB SER A 385 -17.833 19.806 -9.221 1.00 45.88 ATOM 59 OG SER A 385 -19.200 19.626 -9.550 1.00 48.09 ATOM 60 N TYR A 386 -15.457 22.139 -7.954 1.00 42.99 ATOM 61 CA TYR A 386 -14.100 22.161 -7.426 1.00 39.85 ATOM 62 C TYR A 386 -14.108 22.198 -5.900 1.00 48.47 ATOM 63 O TYR A 386 -15.000 22.773 -5.269 1.00 46.67 ATOM 64 CB TYR A 386 -13.320 23.360 -7.972 1.00 47.87 ATOM 65 CG TYR A 386 -11.893 23.444 -7.463 1.00 52.15 ATOM 66 CD1 TYR A 386 -10.896 22.631 -7.990 1.00 47.88 ATOM 67 CD2 TYR A 386 -11.544 24.334 -6.454 1.00 46.89 ATOM 68 CE1 TYR A 386 -9.591 22.702 -7.525 1.00 52.74 ATOM 69 CE2 TYR A 386 -10.242 24.413 -5.984 1.00 51.12 ATOM 70 CZ TYR A 386 -9.270 23.595 -6.522 1.00 58.36 ATOM 71 OH TYR A 386 -7.975 23.669 -6.059 1.00 59.58 ATOM 72 N ALA A 387 -13.094 21.567 -5.310 1.00 46.55 ATOM 73 CA ALA A 387 -12.913 21.567 -3.867 1.00 54.28 ATOM 74 C ALA A 387 -11.425 21.510 -3.561 1.00 58.33 ATOM 75 O ALA A 387 -10.648 20.899 -4.300 1.00 53.10 ATOM 76 CB ALA A 387 -13.640 20.395 -3.199 1.00 46.19 ATOM 77 N SER A 388 -11.035 22.149 -2.460 1.00 57.48 ATOM 78 CA SER A 388 -9.637 22.221 -2.066 1.00 56.81 ATOM 79 C SER A 388 -9.517 21.983 -0.568 1.00 67.89 ATOM 80 O SER A 388 -10.504 22.005 0.173 1.00 71.43 ATOM 81 CB SER A 388 -9.014 23.571 -2.438 1.00 62.81 ATOM 82 OG SER A 388 -7.693 23.666 -1.933 1.00 70.90 ATOM 83 N ARG A 389 -8.281 21.756 -0.127 1.00 76.30 ATOM 84 CA ARG A 389 -7.998 21.482 1.274 1.00 83.20 ATOM 85 C ARG A 389 -7.713 22.739 2.084 1.00 71.74 ATOM 86 O ARG A 389 -7.855 22.711 3.311 1.00 68.21 ATOM 87 CB ARG A 389 -6.810 20.521 1.390 1.00 93.71 ATOM 88 CG ARG A 389 -7.014 19.205 0.655 1.00100.66 ATOM 89 CD ARG A 389 -5.719 18.418 0.521 1.00108.49 ATOM 90 NE ARG A 389 -5.927 17.163 -0.195 1.00115.01 ATOM 91 CZ ARG A 389 -4.955 16.323 -0.536 1.00119.03 ATOM 92 NH1 ARG A 389 -3.695 16.601 -0.229 1.00118.17 ATOM 93 NH2 ARG A 389 -5.242 15.203 -1.187 1.00121.42 ATOM 94 N ASP A 390 -7.314 23.831 1.436 1.00 54.68 ATOM 95 CA ASP A 390 -6.999 25.074 2.123 1.00 73.02 ATOM 96 C ASP A 390 -7.656 26.243 1.400 1.00 71.00 ATOM 97 O ASP A 390 -8.051 26.143 0.235 1.00 65.63 ATOM 98 CB ASP A 390 -5.480 25.291 2.230 1.00 80.18 ATOM 99 CG ASP A 390 -4.812 25.436 0.880 1.00 72.34 ATOM 100 OD1 ASP A 390 -3.844 26.218 0.776 1.00 76.66 ATOM 101 OD2 ASP A 390 -5.252 24.766 -0.077 1.00 85.12 ATOM 102 N THR A 391 -7.770 27.363 2.119 1.00 58.36 ATOM 103 CA THR A 391 -8.514 28.507 1.601 1.00 51.78 ATOM 104 C THR A 391 -7.774 29.210 0.469 1.00 56.66 ATOM 105 O THR A 391 -8.414 29.771 -0.427 1.00 56.07 ATOM 106 CB THR A 391 -8.808 29.493 2.731 1.00 66.36 ATOM 107 OG1 THR A 391 -9.160 28.769 3.916 1.00 77.57 ATOM 108 CG2 THR A 391 -9.965 30.400 2.351 1.00 69.14 ATOM 109 N TYR A 392 -6.437 29.194 0.490 1.00 57.48 ATOM 110 CA TYR A 392 -5.669 29.881 -0.545 1.00 55.12 ATOM 111 C TYR A 392 -6.033 29.372 -1.933 1.00 51.43 ATOM 112 O TYR A 392 -6.258 30.160 -2.859 1.00 51.92 ATOM 113 CB TYR A 392 -4.169 29.713 -0.297 1.00 52.91 ATOM 114 CG TYR A 392 -3.339 29.869 -1.558 1.00 62.39 ATOM 115 CD1 TYR A 392 -2.931 28.757 -2.290 1.00 57.48 ATOM 116 CD2 TYR A 392 -2.980 31.127 -2.027 1.00 62.95 ATOM 117 CE1 TYR A 392 -2.183 28.895 -3.448 1.00 54.54 ATOM 118 CE2 TYR A 392 -2.231 31.274 -3.185 1.00 58.05 ATOM 119 CZ TYR A 392 -1.836 30.155 -3.891 1.00 61.45 ATOM 120 OH TYR A 392 -1.089 30.293 -5.040 1.00 58.82 ATOM 121 N LYS A 393 -6.086 28.048 -2.098 1.00 56.58 ATOM 122 CA LYS A 393 -6.357 27.482 -3.415 1.00 54.57 ATOM 123 C LYS A 393 -7.806 27.684 -3.831 1.00 58.16 ATOM 124 O LYS A 393 -8.085 27.849 -5.025 1.00 54.07 ATOM 125 CB LYS A 393 -5.989 25.999 -3.436 1.00 57.74 ATOM 126 CG LYS A 393 -4.497 25.760 -3.587 1.00 65.96 ATOM 127 CD LYS A 393 -4.153 24.286 -3.631 1.00 66.50 ATOM 128 CE LYS A 393 -2.666 24.097 -3.870 1.00 58.43 ATOM 129 NZ LYS A 393 -2.241 22.680 -3.699 1.00 69.00 ATOM 130 N LEU A 394 -8.739 27.669 -2.877 1.00 60.59 ATOM 131 CA LEU A 394 -10.122 27.980 -3.219 1.00 59.87 ATOM 132 C LEU A 394 -10.257 29.431 -3.661 1.00 57.28 ATOM 133 O LEU A 394 -10.974 29.730 -4.623 1.00 61.78 ATOM 134 CB LEU A 394 -11.043 27.688 -2.037 1.00 63.40 ATOM 135 CG LEU A 394 -12.529 27.860 -2.361 1.00 64.70 ATOM 136 CD1 LEU A 394 -12.903 27.043 -3.590 1.00 68.51 ATOM 137 CD2 LEU A 394 -13.404 27.478 -1.177 1.00 64.08 ATOM 138 N LYS A 395 -9.570 30.346 -2.973 1.00 54.58 ATOM 139 CA LYS A 395 -9.552 31.739 -3.409 1.00 53.19 ATOM 140 C LYS A 395 -8.964 31.869 -4.807 1.00 58.98 ATOM 141 O LYS A 395 -9.506 32.588 -5.654 1.00 69.56 ATOM 142 CB LYS A 395 -8.753 32.593 -2.426 1.00 48.85 ATOM 143 CG LYS A 395 -9.367 32.730 -1.045 1.00 61.44 ATOM 144 CD LYS A 395 -8.429 33.506 -0.130 1.00 73.85 ATOM 145 CE LYS A 395 -9.008 33.696 1.261 1.00 79.56 ATOM 146 NZ LYS A 395 -8.053 34.418 2.150 1.00 80.65 ATOM 147 N ARG A 396 -7.850 31.181 -5.064 1.00 49.25 ATOM 148 CA ARG A 396 -7.227 31.245 -6.381 1.00 57.07 ATOM 149 C ARG A 396 -8.133 30.644 -7.449 1.00 54.79 ATOM 150 O ARG A 396 -8.194 31.148 -8.575 1.00 55.44 ATOM 151 CB ARG A 396 -5.874 30.534 -6.354 1.00 52.47 ATOM 152 CG ARG A 396 -5.102 30.627 -7.659 1.00 49.92 ATOM 153 CD ARG A 396 -3.800 29.845 -7.599 1.00 42.76 ATOM 154 NE ARG A 396 -4.026 28.404 -7.539 1.00 51.75 ATOM 155 CZ ARG A 396 -3.056 27.497 -7.495 1.00 51.11 ATOM 156 NH1 ARG A 396 -1.786 27.882 -7.502 1.00 52.84 ATOM 157 NH2 ARG A 396 -3.354 26.206 -7.444 1.00 45.26 ATOM 158 N HIS A 397 -8.849 29.569 -7.111 1.00 55.32 ATOM 159 CA HIS A 397 -9.799 28.990 -8.053 1.00 52.27 ATOM 160 C HIS A 397 -10.956 29.937 -8.337 1.00 48.36 ATOM 161 O HIS A 397 -11.472 29.965 -9.460 1.00 52.21 ATOM 162 CB HIS A 397 -10.333 27.661 -7.521 1.00 46.37 ATOM 163 CG HIS A 397 -11.596 27.213 -8.189 1.00 51.44 ATOM 164 ND1 HIS A 397 -11.618 26.691 -9.464 1.00 47.80 ATOM 165 CD2 HIS A 397 -12.883 27.232 -7.768 1.00 52.75 ATOM 166 CE1 HIS A 397 -12.864 26.395 -9.795 1.00 53.11 ATOM 167 NE2 HIS A 397 -13.651 26.714 -8.783 1.00 60.74 ATOM 168 N MET A 398 -11.382 30.716 -7.338 1.00 49.83 ATOM 169 CA MET A 398 -12.493 31.640 -7.533 1.00 55.41 ATOM 170 C MET A 398 -12.187 32.700 -8.582 1.00 69.42 ATOM 171 O MET A 398 -13.120 33.285 -9.143 1.00 75.13 ATOM 172 CB MET A 398 -12.862 32.310 -6.209 1.00 49.04 ATOM 173 CG MET A 398 -13.583 31.397 -5.231 1.00 55.42 ATOM 174 SD MET A 398 -15.078 30.658 -5.921 1.00 66.58 ATOM 175 CE MET A 398 -15.829 29.968 -4.446 1.00 75.04 ATOM 176 N ARG A 399 -10.907 32.966 -8.856 1.00 66.29 ATOM 177 CA ARG A 399 -10.558 33.899 -9.920 1.00 61.48 ATOM 178 C ARG A 399 -10.997 33.395 -11.287 1.00 59.81 ATOM 179 O ARG A 399 -11.193 34.204 -12.200 1.00 65.42 ATOM 180 CB ARG A 399 -9.053 34.163 -9.923 1.00 65.17 ATOM 181 CG ARG A 399 -8.528 34.801 -8.651 1.00 62.52 ATOM 182 CD ARG A 399 -7.017 34.895 -8.696 1.00 61.09 ATOM 183 NE ARG A 399 -6.433 35.057 -7.369 1.00 65.35 ATOM 184 CZ ARG A 399 -5.176 34.749 -7.071 1.00 63.77 ATOM 185 NH1 ARG A 399 -4.375 34.258 -8.007 1.00 52.49 ATOM 186 NH2 ARG A 399 -4.723 34.923 -5.838 1.00 63.57 ATOM 187 N THR A 400 -11.157 32.079 -11.451 1.00 50.56 ATOM 188 CA THR A 400 -11.683 31.546 -12.701 1.00 59.47 ATOM 189 C THR A 400 -13.152 31.892 -12.895 1.00 64.27 ATOM 190 O THR A 400 -13.635 31.879 -14.032 1.00 67.38 ATOM 191 CB THR A 400 -11.500 30.028 -12.756 1.00 58.99 ATOM 192 OG1 THR A 400 -12.416 29.400 -11.850 1.00 60.72 ATOM 193 CG2 THR A 400 -10.077 29.647 -12.372 1.00 53.37 ATOM 194 N HIS A 401 -13.872 32.195 -11.815 1.00 58.55 ATOM 195 CA HIS A 401 -15.276 32.574 -11.900 1.00 54.53 ATOM 196 C HIS A 401 -15.451 34.088 -11.955 1.00 55.82 ATOM 197 O HIS A 401 -16.226 34.598 -12.770 1.00 68.66 ATOM 198 CB HIS A 401 -16.052 31.999 -10.711 1.00 54.00 ATOM 199 CG HIS A 401 -16.023 30.505 -10.636 1.00 52.14 ATOM 200 ND1 HIS A 401 -16.655 29.701 -11.560 1.00 45.95 ATOM 201 CD2 HIS A 401 -15.443 29.668 -9.743 1.00 53.44 ATOM 202 CE1 HIS A 401 -16.463 28.433 -11.243 1.00 51.11 ATOM 203 NE2 HIS A 401 -15.730 28.386 -10.145 1.00 51.85 ATOM 204 N SER A 402 -14.738 34.816 -11.097 1.00 57.86 ATOM 205 CA SER A 402 -14.856 36.267 -11.052 1.00 66.83 ATOM 206 C SER A 402 -14.083 36.963 -12.163 1.00 61.86 ATOM 207 O SER A 402 -14.302 38.158 -12.390 1.00 63.96 ATOM 208 CB SER A 402 -14.377 36.791 -9.695 1.00 65.50 ATOM 209 OG SER A 402 -12.982 36.598 -9.536 1.00 69.02 ATOM 210 ZN ZN A 501 -15.696 26.768 -8.960 1.00 48.86 ATOM 211 S SO4 A 505 -1.046 33.260 -7.071 1.00 61.68 ATOM 212 O1 SO4 A 505 0.020 33.954 -7.787 1.00 56.16 ATOM 213 O2 SO4 A 505 -1.919 32.584 -8.024 1.00 75.05 ATOM 214 O3 SO4 A 505 -1.826 34.224 -6.297 1.00 68.66 ATOM 215 O4 SO4 A 505 -0.458 32.265 -6.178 1.00 61.40 TER