HEADER RIBOSOME 09-NOV-16 5MC6 TITLE Cryo-EM structure of a native ribosome-Ski2-Ski3-Ski8 complex from S. TITLE 2 cerevisiae COMPND MOL_ID: 59; COMPND 2 MOLECULE: 60S ribosomal protein L41-A; COMPND 3 CHAIN: AS; EXPDTA ELECTRON MICROSCOPY DBREF 5MC6 A 1 25 UNP P0CX86 RL41A_YEAST 1 25 SEQRES 1 AS 25 MET ARG ALA LYS TRP ARG LYS LYS ARG THR ARG ARG LEU SEQRES 2 AS 25 LYS ARG LYS ARG ARG LYS VAL ARG ALA ARG SER LYS ATOM 1 N MET A 1 286.566 217.779 239.446 1.00158.65 ATOM 2 CA MET A 1 285.691 218.390 238.392 1.00161.06 ATOM 3 C MET A 1 286.482 218.810 237.146 1.00146.13 ATOM 4 O MET A 1 287.713 218.836 237.167 1.00144.27 ATOM 5 CB MET A 1 284.882 219.569 238.967 1.00172.02 ATOM 6 CG MET A 1 285.673 220.606 239.761 1.00177.32 ATOM 7 SD MET A 1 284.611 221.694 240.744 1.00182.07 ATOM 8 CE MET A 1 283.562 222.403 239.474 1.00181.46 ATOM 9 N ARG A 2 285.763 219.129 236.070 1.00135.59 ATOM 10 CA ARG A 2 286.370 219.456 234.766 1.00135.80 ATOM 11 C ARG A 2 287.113 220.805 234.788 1.00133.73 ATOM 12 O ARG A 2 286.820 221.661 235.621 1.00138.23 ATOM 13 CB ARG A 2 285.284 219.462 233.680 1.00139.77 ATOM 14 CG ARG A 2 285.783 219.415 232.238 1.00138.42 ATOM 15 CD ARG A 2 284.661 219.695 231.258 1.00132.56 ATOM 16 NE ARG A 2 285.130 219.676 229.878 1.00127.15 ATOM 17 CZ ARG A 2 284.385 219.991 228.822 1.00127.65 ATOM 18 NH1 ARG A 2 283.113 220.365 228.964 1.00125.49 ATOM 19 NH2 ARG A 2 284.918 219.935 227.605 1.00130.96 ATOM 20 N ALA A 3 288.068 220.979 233.872 1.00134.07 ATOM 21 CA ALA A 3 288.950 222.138 233.842 1.00142.37 ATOM 22 C ALA A 3 288.238 223.370 233.315 1.00145.13 ATOM 23 O ALA A 3 288.433 224.464 233.855 1.00149.03 ATOM 24 CB ALA A 3 290.174 221.841 232.990 1.00150.25 ATOM 25 N LYS A 4 287.398 223.173 232.299 1.00144.76 ATOM 26 CA LYS A 4 286.683 224.273 231.667 1.00143.89 ATOM 27 C LYS A 4 285.776 224.988 232.663 1.00145.13 ATOM 28 O LYS A 4 285.761 226.218 232.703 1.00151.09 ATOM 29 CB LYS A 4 285.890 223.803 230.434 1.00142.91 ATOM 30 CG LYS A 4 285.326 224.941 229.583 1.00143.36 ATOM 31 CD LYS A 4 284.779 224.449 228.245 1.00144.16 ATOM 32 CE LYS A 4 284.328 225.590 227.334 1.00136.12 ATOM 33 NZ LYS A 4 284.003 225.127 225.953 1.00130.06 ATOM 34 N TRP A 5 285.062 224.213 233.484 1.00142.78 ATOM 35 CA TRP A 5 284.198 224.752 234.516 1.00139.27 ATOM 36 C TRP A 5 284.979 225.308 235.695 1.00134.12 ATOM 37 O TRP A 5 284.561 226.304 236.286 1.00135.82 ATOM 38 CB TRP A 5 283.188 223.712 235.043 1.00143.70 ATOM 39 CG TRP A 5 282.246 223.097 234.018 1.00146.36 ATOM 40 CD1 TRP A 5 282.021 221.759 233.817 1.00147.66 ATOM 41 CD2 TRP A 5 281.404 223.785 233.082 1.00143.31 ATOM 42 NE1 TRP A 5 281.104 221.576 232.816 1.00146.37 ATOM 43 CE2 TRP A 5 280.708 222.801 232.346 1.00146.90 ATOM 44 CE3 TRP A 5 281.171 225.136 232.791 1.00144.37 ATOM 45 CZ2 TRP A 5 279.791 223.127 231.336 1.00151.27 ATOM 46 CZ3 TRP A 5 280.257 225.459 231.783 1.00147.39 ATOM 47 CH2 TRP A 5 279.581 224.457 231.070 1.00146.48 ATOM 48 N ARG A 6 286.108 224.675 236.021 1.00138.84 ATOM 49 CA ARG A 6 287.009 225.190 237.049 1.00149.78 ATOM 50 C ARG A 6 287.470 226.592 236.731 1.00142.55 ATOM 51 O ARG A 6 287.491 227.438 237.619 1.00145.72 ATOM 52 CB ARG A 6 288.237 224.294 237.291 1.00162.48 ATOM 53 CG ARG A 6 288.981 224.632 238.587 1.00171.28 ATOM 54 CD ARG A 6 290.312 223.909 238.715 1.00188.55 ATOM 55 NE ARG A 6 291.192 224.550 239.701 1.00209.63 ATOM 56 CZ ARG A 6 291.954 225.632 239.487 1.00226.21 ATOM 57 NH1 ARG A 6 291.972 226.253 238.305 1.00231.70 ATOM 58 NH2 ARG A 6 292.711 226.110 240.477 1.00226.61 ATOM 59 N LYS A 7 287.818 226.817 235.459 1.00137.29 ATOM 60 CA LYS A 7 288.229 228.125 234.957 1.00134.16 ATOM 61 C LYS A 7 287.148 229.184 235.257 1.00127.56 ATOM 62 O LYS A 7 287.424 230.269 235.774 1.00130.36 ATOM 63 CB LYS A 7 288.521 228.059 233.439 1.00140.73 ATOM 64 CG LYS A 7 289.014 229.346 232.765 1.00145.83 ATOM 65 CD LYS A 7 289.237 229.145 231.258 1.00148.91 ATOM 66 CE LYS A 7 289.399 230.459 230.489 1.00144.31 ATOM 67 NZ LYS A 7 289.576 230.265 229.019 1.00137.26 ATOM 68 N LYS A 8 285.911 228.827 234.938 1.00121.49 ATOM 69 CA LYS A 8 284.784 229.710 235.169 1.00118.42 ATOM 70 C LYS A 8 284.600 230.020 236.650 1.00115.47 ATOM 71 O LYS A 8 284.407 231.168 237.039 1.00121.60 ATOM 72 CB LYS A 8 283.482 229.155 234.580 1.00121.44 ATOM 73 CG LYS A 8 282.451 230.238 234.284 1.00126.50 ATOM 74 CD LYS A 8 281.152 229.680 233.715 1.00131.60 ATOM 75 CE LYS A 8 281.258 229.311 232.238 1.00134.38 ATOM 76 NZ LYS A 8 281.310 230.483 231.319 1.00136.09 ATOM 77 N ARG A 9 284.695 228.962 237.450 1.00121.42 ATOM 78 CA ARG A 9 284.592 229.070 238.903 1.00135.96 ATOM 79 C ARG A 9 285.626 230.061 239.425 1.00143.58 ATOM 80 O ARG A 9 285.315 230.865 240.304 1.00149.39 ATOM 81 CB ARG A 9 284.739 227.698 239.605 1.00142.91 ATOM 82 CG ARG A 9 284.286 227.657 241.075 1.00140.82 ATOM 83 CD ARG A 9 284.981 226.575 241.910 1.00138.80 ATOM 84 NE ARG A 9 284.261 225.291 241.944 1.00139.61 ATOM 85 CZ ARG A 9 283.495 224.835 242.945 1.00140.70 ATOM 86 NH1 ARG A 9 283.296 225.540 244.063 1.00140.16 ATOM 87 NH2 ARG A 9 282.910 223.641 242.830 1.00138.19 ATOM 88 N THR A 10 286.848 229.988 238.883 1.00143.98 ATOM 89 CA THR A 10 287.887 230.940 239.247 1.00139.87 ATOM 90 C THR A 10 287.420 232.330 238.862 1.00134.40 ATOM 91 O THR A 10 287.230 233.147 239.739 1.00135.17 ATOM 92 CB THR A 10 289.286 230.619 238.655 1.00144.57 ATOM 93 OG1 THR A 10 289.190 229.550 237.708 1.00151.09 ATOM 94 CG2 THR A 10 290.261 230.208 239.760 1.00143.28 ATOM 95 N ARG A 11 287.200 232.539 237.566 1.00132.91 ATOM 96 CA ARG A 11 286.817 233.821 236.997 1.00137.71 ATOM 97 C ARG A 11 285.729 234.573 237.750 1.00137.04 ATOM 98 O ARG A 11 285.908 235.756 238.064 1.00150.37 ATOM 99 CB ARG A 11 286.428 233.681 235.515 1.00145.02 ATOM 100 CG ARG A 11 287.604 233.740 234.545 1.00152.43 ATOM 101 CD ARG A 11 287.170 233.312 233.148 1.00161.87 ATOM 102 NE ARG A 11 288.214 233.466 232.126 1.00166.60 ATOM 103 CZ ARG A 11 288.372 234.516 231.310 1.00168.80 ATOM 104 NH1 ARG A 11 287.568 235.584 231.365 1.00163.78 ATOM 105 NH2 ARG A 11 289.367 234.497 230.421 1.00168.32 ATOM 106 N ARG A 12 284.638 233.868 238.055 1.00129.14 ATOM 107 CA ARG A 12 283.522 234.445 238.795 1.00127.31 ATOM 108 C ARG A 12 283.994 234.937 240.165 1.00126.82 ATOM 109 O ARG A 12 283.656 236.061 240.582 1.00137.07 ATOM 110 CB ARG A 12 282.356 233.456 238.967 1.00135.40 ATOM 111 CG ARG A 12 281.509 233.205 237.717 1.00147.19 ATOM 112 CD ARG A 12 280.250 232.390 238.052 1.00159.18 ATOM 113 NE ARG A 12 279.629 231.720 236.893 1.00166.48 ATOM 114 CZ ARG A 12 278.549 230.922 236.942 1.00168.28 ATOM 115 NH1 ARG A 12 277.927 230.669 238.097 1.00167.74 ATOM 116 NH2 ARG A 12 278.077 230.367 235.822 1.00163.33 ATOM 117 N LEU A 13 284.820 234.130 240.838 1.00125.84 ATOM 118 CA LEU A 13 285.325 234.508 242.143 1.00127.82 ATOM 119 C LEU A 13 286.353 235.637 242.069 1.00126.74 ATOM 120 O LEU A 13 286.366 236.497 242.952 1.00133.61 ATOM 121 CB LEU A 13 285.833 233.291 242.942 1.00131.39 ATOM 122 CG LEU A 13 285.749 233.423 244.483 1.00136.80 ATOM 123 CD1 LEU A 13 285.159 232.191 245.173 1.00134.76 ATOM 124 CD2 LEU A 13 287.109 233.766 245.078 1.00140.90 ATOM 125 N LYS A 14 287.128 235.695 240.996 1.00123.58 ATOM 126 CA LYS A 14 288.032 236.802 240.723 1.00120.99 ATOM 127 C LYS A 14 287.293 238.124 240.573 1.00122.17 ATOM 128 O LYS A 14 287.675 239.121 241.213 1.00122.97 ATOM 129 CB LYS A 14 288.905 236.563 239.465 1.00122.55 ATOM 130 CG LYS A 14 290.262 235.916 239.728 1.00128.32 ATOM 131 CD LYS A 14 291.009 235.562 238.438 1.00131.47 ATOM 132 CE LYS A 14 291.829 236.721 237.880 1.00133.04 ATOM 133 NZ LYS A 14 293.176 236.848 238.509 1.00131.59 ATOM 134 N ARG A 15 286.268 238.152 239.716 1.00128.15 ATOM 135 CA ARG A 15 285.485 239.387 239.571 1.00131.72 ATOM 136 C ARG A 15 284.510 239.676 240.723 1.00127.47 ATOM 137 O ARG A 15 283.878 240.723 240.727 1.00126.31 ATOM 138 CB ARG A 15 284.793 239.492 238.196 1.00142.52 ATOM 139 CG ARG A 15 283.655 238.522 237.898 1.00153.99 ATOM 140 CD ARG A 15 283.203 238.671 236.445 1.00161.37 ATOM 141 NE ARG A 15 282.495 237.494 235.934 1.00166.95 ATOM 142 CZ ARG A 15 282.112 237.319 234.666 1.00170.10 ATOM 143 NH1 ARG A 15 282.355 238.246 233.735 1.00168.07 ATOM 144 NH2 ARG A 15 281.475 236.200 234.320 1.00170.56 ATOM 145 N LYS A 16 284.338 238.720 241.638 1.00131.69 ATOM 146 CA LYS A 16 283.781 239.039 242.954 1.00134.84 ATOM 147 C LYS A 16 284.813 239.778 243.821 1.00130.39 ATOM 148 O LYS A 16 284.519 240.826 244.391 1.00136.48 ATOM 149 CB LYS A 16 283.254 237.786 243.673 1.00142.32 ATOM 150 CG LYS A 16 282.098 238.052 244.629 1.00147.45 ATOM 151 CD LYS A 16 280.791 238.304 243.880 1.00153.38 ATOM 152 CE LYS A 16 279.668 238.739 244.811 1.00157.36 ATOM 153 NZ LYS A 16 279.148 237.615 245.638 1.00160.22 ATOM 154 N ARG A 17 286.016 239.219 243.911 1.00123.16 ATOM 155 CA ARG A 17 287.105 239.847 244.616 1.00119.99 ATOM 156 C ARG A 17 287.396 241.234 244.076 1.00118.09 ATOM 157 O ARG A 17 287.839 242.081 244.844 1.00124.71 ATOM 158 CB ARG A 17 288.392 238.995 244.602 1.00122.36 ATOM 159 CG ARG A 17 288.610 238.194 245.880 1.00126.71 ATOM 160 CD ARG A 17 289.912 237.404 245.860 1.00130.10 ATOM 161 NE ARG A 17 289.796 236.165 245.085 1.00134.98 ATOM 162 CZ ARG A 17 290.755 235.241 244.964 1.00138.86 ATOM 163 NH1 ARG A 17 291.940 235.394 245.557 1.00145.03 ATOM 164 NH2 ARG A 17 290.531 234.150 244.233 1.00135.99 ATOM 165 N ARG A 18 287.112 241.489 242.801 1.00118.17 ATOM 166 CA ARG A 18 287.318 242.813 242.244 1.00124.73 ATOM 167 C ARG A 18 286.382 243.826 242.901 1.00130.23 ATOM 168 O ARG A 18 286.821 244.925 243.234 1.00136.13 ATOM 169 CB ARG A 18 287.165 242.844 240.719 1.00130.37 ATOM 170 CG ARG A 18 288.380 242.335 239.956 1.00132.81 ATOM 171 CD ARG A 18 288.542 243.046 238.619 1.00135.73 ATOM 172 NE ARG A 18 289.430 242.309 237.719 1.00141.73 ATOM 173 CZ ARG A 18 289.086 241.244 236.986 1.00149.46 ATOM 174 NH1 ARG A 18 287.849 240.743 237.015 1.00151.06 ATOM 175 NH2 ARG A 18 289.999 240.666 236.207 1.00153.95 ATOM 176 N LYS A 19 285.126 243.434 243.126 1.00134.51 ATOM 177 CA LYS A 19 284.168 244.311 243.782 1.00137.71 ATOM 178 C LYS A 19 284.462 244.426 245.265 1.00135.47 ATOM 179 O LYS A 19 284.318 245.493 245.839 1.00135.31 ATOM 180 CB LYS A 19 282.712 243.836 243.609 1.00148.76 ATOM 181 CG LYS A 19 282.024 244.304 242.335 1.00163.43 ATOM 182 CD LYS A 19 282.386 243.426 241.150 1.00176.90 ATOM 183 CE LYS A 19 281.857 243.985 239.839 1.00186.14 ATOM 184 NZ LYS A 19 282.372 243.224 238.665 1.00187.92 ATOM 185 N VAL A 20 284.874 243.307 245.864 1.00139.80 ATOM 186 CA VAL A 20 285.124 243.250 247.303 1.00142.80 ATOM 187 C VAL A 20 286.275 244.189 247.673 1.00139.34 ATOM 188 O VAL A 20 286.175 244.967 248.632 1.00142.59 ATOM 189 CB VAL A 20 285.411 241.812 247.817 1.00148.09 ATOM 190 CG1 VAL A 20 285.887 241.822 249.274 1.00147.24 ATOM 191 CG2 VAL A 20 284.172 240.931 247.676 1.00151.68 ATOM 192 N ARG A 21 287.353 244.139 246.898 1.00138.54 ATOM 193 CA ARG A 21 288.464 245.058 247.133 1.00140.48 ATOM 194 C ARG A 21 288.086 246.509 246.771 1.00141.92 ATOM 195 O ARG A 21 288.313 247.410 247.580 1.00151.87 ATOM 196 CB ARG A 21 289.753 244.607 246.424 1.00142.24 ATOM 197 CG ARG A 21 291.041 245.076 247.101 1.00141.72 ATOM 198 CD ARG A 21 292.263 244.461 246.441 1.00147.54 ATOM 199 NE ARG A 21 293.462 245.293 246.582 1.00157.95 ATOM 200 CZ ARG A 21 294.608 245.119 245.909 1.00167.10 ATOM 201 NH1 ARG A 21 295.630 245.948 246.123 1.00167.71 ATOM 202 NH2 ARG A 21 294.756 244.131 245.023 1.00167.43 ATOM 203 N ALA A 22 287.436 246.717 245.620 1.00140.39 ATOM 204 CA ALA A 22 287.047 248.074 245.147 1.00142.92 ATOM 205 C ALA A 22 285.939 248.800 245.948 1.00141.76 ATOM 206 O ALA A 22 285.628 249.960 245.665 1.00140.35 ATOM 207 CB ALA A 22 286.667 248.028 243.672 1.00146.14 ATOM 208 N ARG A 23 285.339 248.111 246.914 1.00142.77 ATOM 209 CA ARG A 23 284.456 248.721 247.920 1.00144.16 ATOM 210 C ARG A 23 285.236 249.684 248.844 1.00147.83 ATOM 211 O ARG A 23 284.701 250.712 249.263 1.00144.91 ATOM 212 CB ARG A 23 283.805 247.598 248.743 1.00146.78 ATOM 213 CG ARG A 23 282.449 247.870 249.371 1.00146.29 ATOM 214 CD ARG A 23 281.962 246.584 250.036 1.00145.28 ATOM 215 NE ARG A 23 280.553 246.616 250.408 1.00145.17 ATOM 216 CZ ARG A 23 279.535 246.446 249.563 1.00150.80 ATOM 217 NH1 ARG A 23 278.291 246.485 250.025 1.00155.33 ATOM 218 NH2 ARG A 23 279.738 246.247 248.259 1.00151.04 ATOM 219 N SER A 24 286.493 249.336 249.150 1.00163.00 ATOM 220 CA SER A 24 287.389 250.150 250.000 1.00174.74 ATOM 221 C SER A 24 287.991 251.342 249.241 1.00188.83 ATOM 222 O SER A 24 287.950 252.474 249.732 1.00194.37 ATOM 223 CB SER A 24 288.520 249.276 250.582 1.00169.35 ATOM 224 OG SER A 24 289.353 249.997 251.479 1.00159.33 ATOM 225 N LYS A 25 288.549 251.080 248.057 1.00200.49 ATOM 226 CA LYS A 25 289.170 252.124 247.224 1.00208.35 ATOM 227 C LYS A 25 288.115 253.035 246.596 1.00213.51 ATOM 228 O LYS A 25 288.440 253.979 245.870 1.00213.20 ATOM 229 CB LYS A 25 290.030 251.505 246.114 1.00214.09 ATOM 230 CG LYS A 25 291.186 250.642 246.604 1.00218.63 ATOM 231 CD LYS A 25 292.217 250.386 245.507 1.00219.53 ATOM 232 CE LYS A 25 291.643 249.609 244.329 1.00215.92 ATOM 233 NZ LYS A 25 292.695 249.221 243.348 1.00213.91 TER