HEADER VIRAL PROTEIN/IMMUNE SYSTEM 31-DEC-69 5TOJ TITLE Crystal structure of the RSV F glycoprotein in complex with the TITLE 2 neutralizing single-domain antibody F-VHH-4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: Fusion glycoprotein F0, Fibritin chimera; COMPND 3 CHAIN: A, B, C; COMPND 4 MUTATION: YES; COMPND 5 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 3.30 ANGSTORMS DBREF 5TOJ A 1 513 UNP P03420 FUS_HRSVA 1 513 DBREF 5TOJ A 514 550 PDB 5TOJ 5TOJ 514 550 SEQRES 1 A 32 ILE GLY GLY TYR ILE PRO GLU ALA PRO ARG ASP GLY GLN SEQRES 2 A 32 ALA TYR VAL ARG LYS ASP GLY GLU TRP VAL LEU LEU SER SEQRES 3 A 32 THR PHE LEU GLY GLY LEU ATOM 1 N ILE A 516 70.983 -31.804 190.319 1.00 86.81 ATOM 2 CA ILE A 516 72.014 -32.804 190.073 1.00 80.37 ATOM 3 C ILE A 516 73.264 -31.989 189.812 1.00 87.44 ATOM 4 O ILE A 516 74.344 -32.297 190.315 1.00 93.88 ATOM 5 CB ILE A 516 71.698 -33.768 188.935 1.00 70.08 ATOM 6 CG1 ILE A 516 70.825 -34.895 189.474 1.00 70.36 ATOM 7 CG2 ILE A 516 72.954 -34.459 188.478 1.00 62.18 ATOM 8 CD1 ILE A 516 70.357 -35.875 188.425 1.00 73.52 ATOM 9 N GLY A 517 73.110 -30.947 189.004 1.00 88.57 ATOM 10 CA GLY A 517 74.205 -30.043 188.713 1.00 89.61 ATOM 11 C GLY A 517 74.706 -29.319 189.950 1.00 85.19 ATOM 12 O GLY A 517 75.710 -28.612 189.890 1.00 88.66 ATOM 13 N GLY A 518 74.014 -29.505 191.073 1.00 76.92 ATOM 14 CA GLY A 518 74.381 -28.874 192.330 1.00 73.98 ATOM 15 C GLY A 518 75.355 -29.705 193.153 1.00 70.14 ATOM 16 O GLY A 518 75.912 -29.238 194.144 1.00 68.28 ATOM 17 N TYR A 519 75.549 -30.954 192.746 1.00 68.13 ATOM 18 CA TYR A 519 76.394 -31.882 193.484 1.00 63.56 ATOM 19 C TYR A 519 77.791 -31.934 192.898 1.00 67.47 ATOM 20 O TYR A 519 77.998 -31.640 191.725 1.00 74.15 ATOM 21 CB TYR A 519 75.787 -33.285 193.519 1.00 62.59 ATOM 22 CG TYR A 519 74.479 -33.367 194.276 1.00 65.64 ATOM 23 CD1 TYR A 519 74.417 -33.021 195.620 1.00 68.90 ATOM 24 CD2 TYR A 519 73.322 -33.835 193.671 1.00 63.87 ATOM 25 CE1 TYR A 519 73.235 -33.107 196.331 1.00 67.18 ATOM 26 CE2 TYR A 519 72.132 -33.925 194.379 1.00 64.08 ATOM 27 CZ TYR A 519 72.096 -33.556 195.708 1.00 64.42 ATOM 28 OH TYR A 519 70.923 -33.640 196.425 1.00 62.08 ATOM 29 N ILE A 520 78.752 -32.309 193.730 1.00 69.57 ATOM 30 CA ILE A 520 80.149 -32.286 193.338 1.00 72.06 ATOM 31 C ILE A 520 80.524 -33.570 192.625 1.00 72.90 ATOM 32 O ILE A 520 80.208 -34.659 193.100 1.00 73.02 ATOM 33 CB ILE A 520 81.054 -32.131 194.571 1.00 75.44 ATOM 34 CG1 ILE A 520 80.745 -30.825 195.304 1.00 80.54 ATOM 35 CG2 ILE A 520 82.518 -32.221 194.185 1.00 78.10 ATOM 36 CD1 ILE A 520 81.469 -30.687 196.622 1.00 83.51 ATOM 37 N PRO A 521 81.232 -33.452 191.491 1.00 74.62 ATOM 38 CA PRO A 521 81.661 -34.666 190.801 1.00 75.03 ATOM 39 C PRO A 521 82.818 -35.337 191.525 1.00 78.34 ATOM 40 O PRO A 521 83.325 -34.819 192.519 1.00 77.38 ATOM 41 CB PRO A 521 82.084 -34.154 189.424 1.00 71.48 ATOM 42 CG PRO A 521 82.506 -32.758 189.664 1.00 72.51 ATOM 43 CD PRO A 521 81.580 -32.237 190.735 1.00 74.57 ATOM 44 N GLU A 522 83.242 -36.481 191.009 1.00 82.73 ATOM 45 CA GLU A 522 84.278 -37.270 191.651 1.00 84.67 ATOM 46 C GLU A 522 85.633 -36.576 191.564 1.00 81.18 ATOM 47 O GLU A 522 85.896 -35.818 190.634 1.00 83.38 ATOM 48 CB GLU A 522 84.334 -38.666 191.017 1.00 92.70 ATOM 49 CG GLU A 522 85.372 -39.598 191.614 1.00 97.67 ATOM 50 CD GLU A 522 85.127 -39.867 193.087 1.00 98.20 ATOM 51 OE1 GLU A 522 85.893 -39.346 193.929 1.00 97.22 ATOM 52 OE2 GLU A 522 84.171 -40.608 193.401 1.00 98.57 ATOM 53 N ALA A 523 86.479 -36.822 192.555 1.00 73.90 ATOM 54 CA ALA A 523 87.853 -36.357 192.522 1.00 71.36 ATOM 55 C ALA A 523 88.710 -37.341 191.730 1.00 75.02 ATOM 56 O ALA A 523 88.317 -38.493 191.549 1.00 79.00 ATOM 57 CB ALA A 523 88.384 -36.197 193.935 1.00 68.64 ATOM 58 N PRO A 524 89.878 -36.890 191.246 1.00 73.39 ATOM 59 CA PRO A 524 90.811 -37.755 190.519 1.00 76.36 ATOM 60 C PRO A 524 91.112 -39.080 191.226 1.00 81.02 ATOM 61 O PRO A 524 91.200 -39.132 192.453 1.00 81.09 ATOM 62 CB PRO A 524 92.080 -36.902 190.442 1.00 76.36 ATOM 63 CG PRO A 524 91.629 -35.467 190.669 1.00 75.80 ATOM 64 CD PRO A 524 90.166 -35.469 191.005 1.00 74.07 ATOM 65 N ARG A 525 91.281 -40.132 190.431 1.00 86.82 ATOM 66 CA ARG A 525 91.545 -41.478 190.930 1.00 89.63 ATOM 67 C ARG A 525 92.988 -41.910 190.654 1.00 96.53 ATOM 68 O ARG A 525 93.223 -42.816 189.853 1.00101.65 ATOM 69 CB ARG A 525 90.571 -42.455 190.284 1.00 84.85 ATOM 70 CG ARG A 525 89.123 -42.046 190.462 1.00 81.97 ATOM 71 CD ARG A 525 88.195 -43.067 189.852 1.00 86.89 ATOM 72 NE ARG A 525 87.659 -43.988 190.844 1.00 89.00 ATOM 73 CZ ARG A 525 86.368 -44.092 191.135 1.00 90.96 ATOM 74 NH1 ARG A 525 85.481 -43.335 190.500 1.00 90.88 ATOM 75 NH2 ARG A 525 85.969 -44.959 192.055 1.00 91.55 ATOM 76 N ASP A 526 93.949 -41.254 191.295 1.00 95.64 ATOM 77 CA ASP A 526 95.358 -41.570 191.063 1.00101.69 ATOM 78 C ASP A 526 96.158 -41.960 192.308 1.00 98.50 ATOM 79 O ASP A 526 97.383 -41.852 192.313 1.00102.47 ATOM 80 CB ASP A 526 96.043 -40.378 190.394 1.00111.26 ATOM 81 CG ASP A 526 95.797 -39.072 191.134 1.00116.44 ATOM 82 OD1 ASP A 526 95.550 -39.105 192.359 1.00117.19 ATOM 83 OD2 ASP A 526 95.859 -38.005 190.490 1.00119.90 ATOM 84 N GLY A 527 95.483 -42.411 193.356 1.00102.87 ATOM 85 CA GLY A 527 96.169 -42.798 194.575 1.00103.67 ATOM 86 C GLY A 527 96.758 -41.628 195.342 1.00 96.29 ATOM 87 O GLY A 527 97.709 -41.786 196.105 1.00 91.91 ATOM 88 N GLN A 528 96.187 -40.447 195.131 1.00 92.19 ATOM 89 CA GLN A 528 96.589 -39.239 195.841 1.00 92.70 ATOM 90 C GLN A 528 95.364 -38.656 196.530 1.00 88.24 ATOM 91 O GLN A 528 94.272 -38.666 195.962 1.00 89.23 ATOM 92 CB GLN A 528 97.209 -38.215 194.891 1.00 99.57 ATOM 93 CG GLN A 528 98.727 -38.149 194.929 1.00105.99 ATOM 94 CD GLN A 528 99.326 -37.960 193.547 1.00116.50 ATOM 95 OE1 GLN A 528 98.623 -37.612 192.597 1.00120.21 ATOM 96 NE2 GLN A 528 100.631 -38.178 193.431 1.00120.54 ATOM 97 N ALA A 529 95.536 -38.149 197.746 1.00 82.11 ATOM 98 CA ALA A 529 94.416 -37.578 198.482 1.00 73.74 ATOM 99 C ALA A 529 94.089 -36.170 198.001 1.00 68.65 ATOM 100 O ALA A 529 94.987 -35.384 197.690 1.00 69.05 ATOM 101 CB ALA A 529 94.714 -37.567 199.966 1.00 73.22 ATOM 102 N TYR A 530 92.800 -35.851 197.963 1.00 63.96 ATOM 103 CA TYR A 530 92.356 -34.547 197.494 1.00 63.44 ATOM 104 C TYR A 530 91.439 -33.875 198.504 1.00 62.79 ATOM 105 O TYR A 530 90.629 -34.531 199.156 1.00 63.24 ATOM 106 CB TYR A 530 91.640 -34.680 196.152 1.00 66.48 ATOM 107 CG TYR A 530 92.568 -34.847 194.973 1.00 70.78 ATOM 108 CD1 TYR A 530 93.151 -33.746 194.363 1.00 74.15 ATOM 109 CD2 TYR A 530 92.866 -36.107 194.476 1.00 72.16 ATOM 110 CE1 TYR A 530 94.000 -33.896 193.287 1.00 79.14 ATOM 111 CE2 TYR A 530 93.716 -36.268 193.404 1.00 76.84 ATOM 112 CZ TYR A 530 94.280 -35.160 192.810 1.00 80.78 ATOM 113 OH TYR A 530 95.126 -35.315 191.735 1.00 84.74 ATOM 114 N VAL A 531 91.574 -32.560 198.623 1.00 62.53 ATOM 115 CA VAL A 531 90.669 -31.756 199.434 1.00 59.69 ATOM 116 C VAL A 531 89.955 -30.750 198.543 1.00 64.72 ATOM 117 O VAL A 531 90.347 -30.538 197.394 1.00 67.72 ATOM 118 CB VAL A 531 91.405 -31.025 200.571 1.00 54.11 ATOM 119 CG1 VAL A 531 92.107 -32.025 201.469 1.00 52.51 ATOM 120 CG2 VAL A 531 92.396 -30.022 200.005 1.00 53.53 ATOM 121 N ARG A 532 88.907 -30.133 199.073 1.00 63.50 ATOM 122 CA ARG A 532 88.058 -29.260 198.273 1.00 64.04 ATOM 123 C ARG A 532 88.364 -27.780 198.509 1.00 62.57 ATOM 124 O ARG A 532 88.345 -27.314 199.650 1.00 66.70 ATOM 125 CB ARG A 532 86.590 -29.567 198.586 1.00 66.80 ATOM 126 CG ARG A 532 85.593 -28.977 197.611 1.00 72.10 ATOM 127 CD ARG A 532 85.692 -29.622 196.240 1.00 71.10 ATOM 128 NE ARG A 532 84.571 -29.240 195.388 1.00 68.74 ATOM 129 CZ ARG A 532 84.517 -29.471 194.082 1.00 72.95 ATOM 130 NH1 ARG A 532 85.527 -30.077 193.471 1.00 75.73 ATOM 131 NH2 ARG A 532 83.456 -29.090 193.384 1.00 75.50 ATOM 132 N LYS A 533 88.656 -27.049 197.432 1.00 53.71 ATOM 133 CA LYS A 533 88.932 -25.613 197.527 1.00 62.32 ATOM 134 C LYS A 533 88.523 -24.846 196.270 1.00 73.71 ATOM 135 O LYS A 533 88.946 -25.186 195.164 1.00 77.59 ATOM 136 CB LYS A 533 90.418 -25.362 197.793 1.00 64.31 ATOM 137 CG LYS A 533 90.842 -23.921 197.513 1.00 67.20 ATOM 138 CD LYS A 533 92.276 -23.637 197.921 1.00 65.83 ATOM 139 CE LYS A 533 92.750 -22.327 197.319 1.00 70.20 ATOM 140 NZ LYS A 533 94.211 -22.121 197.504 1.00 76.82 ATOM 141 N ASP A 534 87.720 -23.799 196.453 1.00 79.00 ATOM 142 CA ASP A 534 87.304 -22.929 195.357 1.00 82.61 ATOM 143 C ASP A 534 86.610 -23.684 194.235 1.00 83.49 ATOM 144 O ASP A 534 86.715 -23.303 193.073 1.00 89.02 ATOM 145 CB ASP A 534 88.500 -22.158 194.787 1.00 90.83 ATOM 146 CG ASP A 534 88.773 -20.867 195.532 1.00 99.71 ATOM 147 OD1 ASP A 534 87.828 -20.335 196.150 1.00104.11 ATOM 148 OD2 ASP A 534 89.922 -20.376 195.490 1.00103.57 ATOM 149 N GLY A 535 85.904 -24.755 194.572 1.00 83.47 ATOM 150 CA GLY A 535 85.112 -25.457 193.580 1.00 84.44 ATOM 151 C GLY A 535 85.872 -26.477 192.754 1.00 84.27 ATOM 152 O GLY A 535 85.342 -27.002 191.775 1.00 85.21 ATOM 153 N GLU A 536 87.108 -26.770 193.145 1.00 84.23 ATOM 154 CA GLU A 536 87.888 -27.794 192.459 1.00 86.42 ATOM 155 C GLU A 536 88.573 -28.688 193.471 1.00 79.27 ATOM 156 O GLU A 536 88.638 -28.367 194.654 1.00 81.37 ATOM 157 CB GLU A 536 88.952 -27.167 191.546 1.00 98.21 ATOM 158 CG GLU A 536 88.441 -26.178 190.501 1.00113.22 ATOM 159 CD GLU A 536 87.923 -26.852 189.239 1.00124.38 ATOM 160 OE1 GLU A 536 87.709 -28.083 189.262 1.00129.63 ATOM 161 OE2 GLU A 536 87.731 -26.150 188.221 1.00126.90 ATOM 162 N TRP A 537 89.085 -29.815 193.002 1.00 70.15 ATOM 163 CA TRP A 537 89.846 -30.706 193.859 1.00 67.81 ATOM 164 C TRP A 537 91.326 -30.348 193.822 1.00 70.04 ATOM 165 O TRP A 537 91.915 -30.208 192.754 1.00 76.74 ATOM 166 CB TRP A 537 89.624 -32.156 193.451 1.00 66.88 ATOM 167 CG TRP A 537 88.240 -32.640 193.743 1.00 68.02 ATOM 168 CD1 TRP A 537 87.227 -32.823 192.850 1.00 71.45 ATOM 169 CD2 TRP A 537 87.723 -33.032 195.021 1.00 65.80 ATOM 170 NE1 TRP A 537 86.108 -33.294 193.493 1.00 67.97 ATOM 171 CE2 TRP A 537 86.388 -33.432 194.827 1.00 64.40 ATOM 172 CE3 TRP A 537 88.261 -33.081 196.311 1.00 65.91 ATOM 173 CZ2 TRP A 537 85.584 -33.871 195.871 1.00 64.44 ATOM 174 CZ3 TRP A 537 87.461 -33.517 197.345 1.00 64.89 ATOM 175 CH2 TRP A 537 86.137 -33.905 197.120 1.00 65.88 ATOM 176 N VAL A 538 91.928 -30.197 194.992 1.00 66.28 ATOM 177 CA VAL A 538 93.330 -29.830 195.070 1.00 65.01 ATOM 178 C VAL A 538 94.087 -30.895 195.853 1.00 70.12 ATOM 179 O VAL A 538 93.567 -31.437 196.828 1.00 70.09 ATOM 180 CB VAL A 538 93.503 -28.451 195.739 1.00 61.78 ATOM 181 CG1 VAL A 538 94.954 -28.008 195.692 1.00 67.96 ATOM 182 CG2 VAL A 538 92.614 -27.417 195.064 1.00 57.44 ATOM 183 N LEU A 539 95.311 -31.188 195.426 1.00 73.90 ATOM 184 CA LEU A 539 96.149 -32.176 196.100 1.00 74.13 ATOM 185 C LEU A 539 96.386 -31.781 197.552 1.00 71.57 ATOM 186 O LEU A 539 96.710 -30.628 197.837 1.00 67.86 ATOM 187 CB LEU A 539 97.486 -32.326 195.380 1.00 75.92 ATOM 188 CG LEU A 539 97.440 -33.123 194.082 1.00 77.61 ATOM 189 CD1 LEU A 539 97.171 -32.187 192.907 1.00 78.17 ATOM 190 CD2 LEU A 539 98.733 -33.894 193.893 1.00 79.27 ATOM 191 N LEU A 540 96.224 -32.738 198.465 1.00 71.05 ATOM 192 CA LEU A 540 96.446 -32.483 199.887 1.00 65.26 ATOM 193 C LEU A 540 97.865 -32.022 200.170 1.00 65.98 ATOM 194 O LEU A 540 98.085 -31.147 201.006 1.00 67.69 ATOM 195 CB LEU A 540 96.140 -33.734 200.714 1.00 58.57 ATOM 196 CG LEU A 540 96.370 -33.605 202.222 1.00 55.84 ATOM 197 CD1 LEU A 540 95.544 -32.468 202.794 1.00 58.74 ATOM 198 CD2 LEU A 540 96.033 -34.901 202.933 1.00 54.02 ATOM 199 N SER A 541 98.819 -32.606 199.453 1.00 65.88 ATOM 200 CA SER A 541 100.229 -32.275 199.617 1.00 67.53 ATOM 201 C SER A 541 100.491 -30.777 199.500 1.00 71.18 ATOM 202 O SER A 541 101.370 -30.247 200.176 1.00 74.84 ATOM 203 CB SER A 541 101.075 -33.031 198.589 1.00 72.01 ATOM 204 OG SER A 541 100.692 -32.705 197.264 1.00 75.93 ATOM 205 N THR A 542 99.709 -30.107 198.654 1.00 71.89 ATOM 206 CA THR A 542 99.842 -28.671 198.400 1.00 71.54 ATOM 207 C THR A 542 99.861 -27.843 199.677 1.00 72.48 ATOM 208 O THR A 542 100.537 -26.817 199.754 1.00 76.09 ATOM 209 CB THR A 542 98.698 -28.157 197.506 1.00 70.05 ATOM 210 OG1 THR A 542 98.667 -28.915 196.292 1.00 74.18 ATOM 211 CG2 THR A 542 98.875 -26.677 197.178 1.00 68.17 ATOM 212 N PHE A 543 99.125 -28.296 200.684 1.00 70.04 ATOM 213 CA PHE A 543 98.898 -27.489 201.876 1.00 70.58 ATOM 214 C PHE A 543 99.780 -27.929 203.034 1.00 73.46 ATOM 215 O PHE A 543 99.627 -27.456 204.159 1.00 72.19 ATOM 216 CB PHE A 543 97.424 -27.536 202.272 1.00 66.61 ATOM 217 CG PHE A 543 96.500 -27.160 201.157 1.00 66.24 ATOM 218 CD1 PHE A 543 96.233 -25.830 200.883 1.00 68.72 ATOM 219 CD2 PHE A 543 95.904 -28.132 200.378 1.00 65.92 ATOM 220 CE1 PHE A 543 95.391 -25.476 199.851 1.00 68.69 ATOM 221 CE2 PHE A 543 95.061 -27.782 199.349 1.00 69.81 ATOM 222 CZ PHE A 543 94.804 -26.451 199.086 1.00 69.25 ATOM 223 N LEU A 544 100.710 -28.829 202.752 1.00 78.55 ATOM 224 CA LEU A 544 101.583 -29.345 203.786 1.00 80.16 ATOM 225 C LEU A 544 102.969 -28.735 203.597 1.00 96.03 ATOM 226 O LEU A 544 103.113 -27.673 202.991 1.00 94.64 ATOM 227 CB LEU A 544 101.641 -30.872 203.714 1.00 66.21 ATOM 228 CG LEU A 544 100.273 -31.549 203.865 1.00 55.10 ATOM 229 CD1 LEU A 544 100.388 -33.065 203.895 1.00 47.47 ATOM 230 CD2 LEU A 544 99.515 -31.036 205.068 1.00 48.78 ATOM 231 N GLY A 545 103.986 -29.411 204.112 1.00 66.06 ATOM 232 CA GLY A 545 105.362 -29.003 203.898 1.00 80.66 ATOM 233 C GLY A 545 106.139 -30.109 203.206 1.00 96.34 ATOM 234 O GLY A 545 107.370 -30.104 203.191 1.00 95.97 ATOM 235 N GLY A 546 105.411 -31.100 202.694 1.00109.76 ATOM 236 CA GLY A 546 106.018 -32.246 202.038 1.00116.67 ATOM 237 C GLY A 546 105.952 -33.386 203.026 1.00120.34 ATOM 238 O GLY A 546 106.268 -34.540 202.726 1.00120.04 ATOM 239 N LEU A 547 105.511 -33.019 204.223 1.00121.04 ATOM 240 CA LEU A 547 105.502 -33.881 205.390 1.00116.91 ATOM 241 C LEU A 547 104.382 -34.914 205.363 1.00112.24 ATOM 242 O LEU A 547 104.294 -35.763 206.250 1.00109.54 ATOM 243 CB LEU A 547 105.382 -33.005 206.636 1.00115.15 ATOM 244 CG LEU A 547 106.432 -31.889 206.685 1.00114.21 ATOM 245 CD1 LEU A 547 106.167 -30.925 207.841 1.00114.29 ATOM 246 CD2 LEU A 547 107.852 -32.442 206.718 1.00114.69 TER