HEADER TRANSCRIPTION/DNA 31-DEC-69 5VMU TITLE Kaiso (ZBTB33) zinc finger DNA binding domain in complex with a TITLE 2 double CpG-methylated DNA resembling the specific Kaiso binding TITLE 3 sequence (KBS) COMPND MOL_ID: 1; COMPND 2 MOLECULE: Transcriptional regulator Kaiso; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: residues ; COMPND 5 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.35 ANGSTORMS DBREF 5VMU A 471 604 UNP Q86T24 KAISO_HUMAN 471 604 SEQRES 1 A 25 LYS LYS TYR PRO CYS ARG TYR CYS GLU LYS VAL PHE PRO SEQRES 2 A 25 LEU ALA GLU TYR ARG THR LYS HIS GLU ILE HIS HIS ATOM 1 N LYS A 520 -0.709 -16.181 24.755 1.00 75.61 ATOM 2 CA LYS A 520 -0.499 -17.569 25.169 1.00 75.98 ATOM 3 C LYS A 520 -0.560 -18.511 23.986 1.00 66.48 ATOM 4 O LYS A 520 -1.479 -18.451 23.167 1.00 67.11 ATOM 5 CB LYS A 520 -1.520 -17.998 26.218 1.00 71.13 ATOM 6 CG LYS A 520 -1.343 -17.267 27.534 1.00 91.22 ATOM 7 CD LYS A 520 -1.987 -18.024 28.676 1.00103.13 ATOM 8 CE LYS A 520 -1.674 -17.361 30.010 1.00111.61 ATOM 9 NZ LYS A 520 -2.256 -18.123 31.155 1.00111.13 ATOM 10 N LYS A 521 0.438 -19.377 23.901 1.00 73.00 ATOM 11 CA LYS A 521 0.453 -20.430 22.902 1.00 77.21 ATOM 12 C LYS A 521 0.032 -21.763 23.515 1.00 75.56 ATOM 13 O LYS A 521 0.459 -22.105 24.625 1.00 68.14 ATOM 14 CB LYS A 521 1.846 -20.555 22.279 1.00 71.14 ATOM 15 CG LYS A 521 2.029 -19.745 21.015 1.00 74.78 ATOM 16 CD LYS A 521 2.601 -18.377 21.317 1.00 89.19 ATOM 17 CE LYS A 521 3.063 -17.692 20.047 1.00 89.30 ATOM 18 NZ LYS A 521 4.070 -16.643 20.353 1.00 94.14 ATOM 19 N TYR A 522 -0.807 -22.508 22.796 1.00 63.00 ATOM 20 CA TYR A 522 -1.103 -23.892 23.176 1.00 63.78 ATOM 21 C TYR A 522 -0.645 -24.881 22.088 1.00 62.97 ATOM 22 O TYR A 522 -1.407 -25.228 21.189 1.00 55.76 ATOM 23 CB TYR A 522 -2.593 -24.057 23.466 1.00 63.78 ATOM 24 CG TYR A 522 -3.076 -23.159 24.576 1.00 57.85 ATOM 25 CD1 TYR A 522 -3.055 -23.590 25.896 1.00 53.75 ATOM 26 CD2 TYR A 522 -3.542 -21.871 24.306 1.00 62.44 ATOM 27 CE1 TYR A 522 -3.493 -22.775 26.918 1.00 69.79 ATOM 28 CE2 TYR A 522 -3.987 -21.044 25.322 1.00 55.89 ATOM 29 CZ TYR A 522 -3.960 -21.501 26.625 1.00 68.83 ATOM 30 OH TYR A 522 -4.392 -20.694 27.649 1.00 73.90 ATOM 31 N PRO A 523 0.621 -25.317 22.161 1.00 66.46 ATOM 32 CA PRO A 523 1.208 -26.208 21.150 1.00 76.74 ATOM 33 C PRO A 523 0.789 -27.667 21.321 1.00 65.78 ATOM 34 O PRO A 523 0.725 -28.132 22.454 1.00 66.75 ATOM 35 CB PRO A 523 2.712 -26.051 21.385 1.00 75.20 ATOM 36 CG PRO A 523 2.822 -25.741 22.842 1.00 73.32 ATOM 37 CD PRO A 523 1.596 -24.933 23.197 1.00 70.74 ATOM 38 N CYS A 524 0.490 -28.361 20.222 1.00 68.21 ATOM 39 CA CYS A 524 0.264 -29.811 20.254 1.00 64.84 ATOM 40 C CYS A 524 1.542 -30.518 20.703 1.00 64.81 ATOM 41 O CYS A 524 2.646 -30.180 20.263 1.00 57.71 ATOM 42 CB CYS A 524 -0.188 -30.328 18.880 1.00 65.19 ATOM 43 SG CYS A 524 -0.392 -32.157 18.732 1.00 49.91 ATOM 44 N ARG A 525 1.394 -31.497 21.588 0.39 72.12 ATOM 45 CA ARG A 525 2.549 -32.217 22.116 0.39 76.35 ATOM 46 C ARG A 525 2.848 -33.463 21.287 0.39 75.12 ATOM 47 O ARG A 525 3.649 -34.306 21.688 0.39 78.97 ATOM 48 CB ARG A 525 2.320 -32.589 23.584 0.39 77.41 ATOM 49 CG ARG A 525 1.896 -31.405 24.461 0.39 77.58 ATOM 50 CD ARG A 525 3.052 -30.443 24.749 0.39 81.73 ATOM 51 NE ARG A 525 3.824 -30.851 25.922 0.39 80.38 ATOM 52 CZ ARG A 525 5.072 -31.306 25.887 0.39 67.88 ATOM 53 NH1 ARG A 525 5.682 -31.648 27.012 0.39 70.51 ATOM 54 NH2 ARG A 525 5.714 -31.410 24.732 0.39 68.76 ATOM 55 N TYR A 526 2.207 -33.567 20.126 1.00 70.00 ATOM 56 CA TYR A 526 2.413 -34.705 19.228 1.00 58.55 ATOM 57 C TYR A 526 2.912 -34.261 17.874 1.00 59.05 ATOM 58 O TYR A 526 3.578 -35.019 17.169 1.00 73.27 ATOM 59 CB TYR A 526 1.117 -35.498 19.054 1.00 59.39 ATOM 60 CG TYR A 526 0.628 -36.094 20.338 1.00 64.71 ATOM 61 CD1 TYR A 526 1.130 -37.310 20.805 1.00 60.99 ATOM 62 CD2 TYR A 526 -0.320 -35.437 21.100 1.00 62.82 ATOM 63 CE1 TYR A 526 0.679 -37.853 21.996 1.00 65.61 ATOM 64 CE2 TYR A 526 -0.772 -35.971 22.284 1.00 72.57 ATOM 65 CZ TYR A 526 -0.275 -37.176 22.728 1.00 63.39 ATOM 66 OH TYR A 526 -0.740 -37.692 23.913 1.00 72.50 ATOM 67 N CYS A 527 2.564 -33.037 17.496 1.00 64.46 ATOM 68 CA CYS A 527 3.116 -32.450 16.288 1.00 69.20 ATOM 69 C CYS A 527 3.411 -30.963 16.541 1.00 79.90 ATOM 70 O CYS A 527 3.612 -30.542 17.684 1.00 86.07 ATOM 71 CB CYS A 527 2.167 -32.659 15.096 1.00 56.71 ATOM 72 SG CYS A 527 0.590 -31.740 15.140 1.00 70.31 ATOM 73 N GLU A 528 3.443 -30.172 15.479 1.00 77.45 ATOM 74 CA GLU A 528 3.939 -28.801 15.574 1.00 87.74 ATOM 75 C GLU A 528 2.822 -27.749 15.581 1.00 72.33 ATOM 76 O GLU A 528 3.093 -26.565 15.684 1.00 81.56 ATOM 77 CB GLU A 528 4.921 -28.525 14.422 1.00101.40 ATOM 78 CG GLU A 528 4.270 -28.325 13.047 1.00113.91 ATOM 79 CD GLU A 528 3.360 -29.481 12.634 1.00118.07 ATOM 80 OE1 GLU A 528 3.718 -30.650 12.896 1.00114.68 ATOM 81 OE2 GLU A 528 2.278 -29.219 12.064 1.00120.56 ATOM 82 N LYS A 529 1.572 -28.189 15.477 1.00 70.36 ATOM 83 CA LYS A 529 0.449 -27.261 15.431 1.00 74.87 ATOM 84 C LYS A 529 0.318 -26.455 16.718 1.00 75.02 ATOM 85 O LYS A 529 0.496 -26.979 17.815 1.00 64.94 ATOM 86 CB LYS A 529 -0.856 -28.006 15.162 1.00 66.37 ATOM 87 CG LYS A 529 -0.962 -28.595 13.773 1.00 76.29 ATOM 88 CD LYS A 529 -2.421 -28.772 13.413 1.00 89.96 ATOM 89 CE LYS A 529 -2.601 -29.277 11.996 1.00 98.73 ATOM 90 NZ LYS A 529 -4.054 -29.451 11.701 1.00101.08 ATOM 91 N VAL A 530 0.019 -25.168 16.573 1.00 76.37 ATOM 92 CA VAL A 530 -0.233 -24.325 17.728 1.00 73.50 ATOM 93 C VAL A 530 -1.691 -23.846 17.742 1.00 75.95 ATOM 94 O VAL A 530 -2.281 -23.606 16.691 1.00 84.62 ATOM 95 CB VAL A 530 0.728 -23.148 17.735 1.00 75.97 ATOM 96 CG1 VAL A 530 0.699 -22.447 19.074 1.00 77.35 ATOM 97 CG2 VAL A 530 2.118 -23.665 17.458 1.00 81.02 ATOM 98 N PHE A 531 -2.272 -23.737 18.934 1.00 72.27 ATOM 99 CA PHE A 531 -3.682 -23.359 19.091 1.00 66.70 ATOM 100 C PHE A 531 -3.818 -22.175 20.045 1.00 64.63 ATOM 101 O PHE A 531 -3.039 -22.051 20.990 1.00 75.24 ATOM 102 CB PHE A 531 -4.502 -24.562 19.599 1.00 74.07 ATOM 103 CG PHE A 531 -4.467 -25.753 18.673 1.00 61.11 ATOM 104 CD1 PHE A 531 -3.514 -26.743 18.832 1.00 57.43 ATOM 105 CD2 PHE A 531 -5.391 -25.873 17.640 1.00 53.92 ATOM 106 CE1 PHE A 531 -3.469 -27.830 17.975 1.00 57.96 ATOM 107 CE2 PHE A 531 -5.355 -26.942 16.780 1.00 57.84 ATOM 108 CZ PHE A 531 -4.387 -27.934 16.948 1.00 56.06 ATOM 109 N PRO A 532 -4.797 -21.289 19.791 1.00 72.39 ATOM 110 CA PRO A 532 -5.017 -20.105 20.626 1.00 70.98 ATOM 111 C PRO A 532 -5.926 -20.383 21.824 1.00 71.08 ATOM 112 O PRO A 532 -6.084 -19.515 22.685 1.00 72.34 ATOM 113 CB PRO A 532 -5.682 -19.131 19.659 1.00 74.81 ATOM 114 CG PRO A 532 -6.513 -20.021 18.807 1.00 59.53 ATOM 115 CD PRO A 532 -5.714 -21.304 18.637 1.00 80.90 ATOM 116 N LEU A 533 -6.525 -21.572 21.866 1.00 64.89 ATOM 117 CA LEU A 533 -7.344 -21.994 22.997 1.00 55.23 ATOM 118 C LEU A 533 -6.899 -23.369 23.432 1.00 62.36 ATOM 119 O LEU A 533 -6.610 -24.229 22.605 1.00 60.90 ATOM 120 CB LEU A 533 -8.842 -22.023 22.650 1.00 50.70 ATOM 121 CG LEU A 533 -9.705 -20.784 22.925 1.00 61.17 ATOM 122 CD1 LEU A 533 -9.234 -19.621 22.100 1.00 53.43 ATOM 123 CD2 LEU A 533 -11.181 -21.083 22.638 1.00 49.78 ATOM 124 N ALA A 534 -6.868 -23.578 24.738 1.00 63.57 ATOM 125 CA ALA A 534 -6.470 -24.852 25.292 1.00 58.65 ATOM 126 C ALA A 534 -7.404 -25.984 24.816 1.00 60.65 ATOM 127 O ALA A 534 -6.942 -27.097 24.495 1.00 61.82 ATOM 128 CB ALA A 534 -6.442 -24.757 26.816 1.00 54.30 ATOM 129 N GLU A 535 -8.705 -25.696 24.723 1.00 49.50 ATOM 130 CA GLU A 535 -9.658 -26.758 24.387 1.00 47.33 ATOM 131 C GLU A 535 -9.477 -27.218 22.935 1.00 56.16 ATOM 132 O GLU A 535 -9.660 -28.405 22.618 1.00 62.03 ATOM 133 CB GLU A 535 -11.095 -26.306 24.638 1.00 46.59 ATOM 134 CG GLU A 535 -11.555 -25.176 23.749 1.00 46.59 ATOM 135 CD GLU A 535 -13.032 -24.879 23.897 1.00 54.24 ATOM 136 OE1 GLU A 535 -13.456 -24.500 25.010 1.00 53.42 ATOM 137 OE2 GLU A 535 -13.768 -25.034 22.900 1.00 50.32 ATOM 138 N TYR A 536 -9.085 -26.289 22.058 1.00 45.90 ATOM 139 CA TYR A 536 -8.825 -26.634 20.660 1.00 49.62 ATOM 140 C TYR A 536 -7.701 -27.669 20.568 1.00 53.64 ATOM 141 O TYR A 536 -7.804 -28.697 19.850 1.00 61.84 ATOM 142 CB TYR A 536 -8.464 -25.388 19.846 1.00 58.40 ATOM 143 CG TYR A 536 -9.586 -24.382 19.687 1.00 59.78 ATOM 144 CD1 TYR A 536 -10.871 -24.656 20.144 1.00 65.36 ATOM 145 CD2 TYR A 536 -9.359 -23.152 19.083 1.00 57.31 ATOM 146 CE1 TYR A 536 -11.898 -23.732 19.996 1.00 52.51 ATOM 147 CE2 TYR A 536 -10.376 -22.228 18.932 1.00 62.15 ATOM 148 CZ TYR A 536 -11.640 -22.522 19.394 1.00 56.74 ATOM 149 OH TYR A 536 -12.647 -21.605 19.249 1.00 54.20 ATOM 150 N ARG A 537 -6.635 -27.394 21.318 1.00 43.56 ATOM 151 CA ARG A 537 -5.505 -28.296 21.389 1.00 53.53 ATOM 152 C ARG A 537 -5.906 -29.654 21.962 1.00 53.17 ATOM 153 O ARG A 537 -5.499 -30.692 21.450 1.00 62.43 ATOM 154 CB ARG A 537 -4.371 -27.716 22.231 1.00 50.05 ATOM 155 CG ARG A 537 -3.309 -28.794 22.522 1.00 56.31 ATOM 156 CD ARG A 537 -2.133 -28.283 23.296 1.00 62.01 ATOM 157 NE ARG A 537 -2.516 -27.834 24.625 1.00 71.61 ATOM 158 CZ ARG A 537 -1.664 -27.344 25.517 1.00 65.18 ATOM 159 NH1 ARG A 537 -0.374 -27.259 25.229 1.00 68.70 ATOM 160 NH2 ARG A 537 -2.102 -26.960 26.704 1.00 63.26 ATOM 161 N THR A 538 -6.688 -29.650 23.029 1.00 55.06 ATOM 162 CA THR A 538 -7.109 -30.914 23.623 1.00 55.24 ATOM 163 C THR A 538 -7.900 -31.801 22.645 1.00 55.95 ATOM 164 O THR A 538 -7.601 -33.007 22.466 1.00 53.03 ATOM 165 CB THR A 538 -7.925 -30.643 24.866 1.00 54.55 ATOM 166 OG1 THR A 538 -7.066 -30.034 25.840 1.00 52.38 ATOM 167 CG2 THR A 538 -8.527 -31.926 25.422 1.00 47.36 ATOM 168 N LYS A 539 -8.884 -31.210 21.975 1.00 45.72 ATOM 169 CA LYS A 539 -9.602 -31.989 20.962 1.00 56.76 ATOM 170 C LYS A 539 -8.636 -32.534 19.901 1.00 56.56 ATOM 171 O LYS A 539 -8.690 -33.718 19.512 1.00 49.38 ATOM 172 CB LYS A 539 -10.695 -31.143 20.314 1.00 43.52 ATOM 173 CG LYS A 539 -11.646 -30.506 21.327 1.00 55.21 ATOM 174 CD LYS A 539 -12.508 -31.529 22.070 1.00 64.66 ATOM 175 CE LYS A 539 -13.636 -30.789 22.810 1.00 82.97 ATOM 176 NZ LYS A 539 -14.451 -31.603 23.772 1.00 80.83 ATOM 177 N HIS A 540 -7.725 -31.670 19.460 1.00 53.24 ATOM 178 CA HIS A 540 -6.728 -32.089 18.487 1.00 50.55 ATOM 179 C HIS A 540 -5.887 -33.318 18.941 1.00 56.32 ATOM 180 O HIS A 540 -5.704 -34.312 18.204 1.00 50.28 ATOM 181 CB HIS A 540 -5.824 -30.901 18.188 1.00 50.20 ATOM 182 CG HIS A 540 -4.687 -31.222 17.276 1.00 50.31 ATOM 183 ND1 HIS A 540 -4.839 -31.328 15.912 1.00 53.13 ATOM 184 CD2 HIS A 540 -3.379 -31.448 17.528 1.00 44.94 ATOM 185 CE1 HIS A 540 -3.674 -31.608 15.362 1.00 56.72 ATOM 186 NE2 HIS A 540 -2.770 -31.680 16.321 1.00 63.24 ATOM 187 N GLU A 541 -5.395 -33.261 20.171 1.00 53.79 ATOM 188 CA GLU A 541 -4.536 -34.325 20.687 1.00 57.65 ATOM 189 C GLU A 541 -5.303 -35.636 20.828 1.00 52.34 ATOM 190 O GLU A 541 -4.775 -36.732 20.509 1.00 55.85 ATOM 191 CB GLU A 541 -3.918 -33.897 22.020 1.00 58.61 ATOM 192 CG GLU A 541 -3.004 -32.685 21.869 1.00 63.61 ATOM 193 CD GLU A 541 -2.292 -32.299 23.146 1.00 60.38 ATOM 194 OE1 GLU A 541 -2.853 -32.491 24.243 1.00 65.78 ATOM 195 OE2 GLU A 541 -1.163 -31.787 23.049 1.00 68.24 ATOM 196 N ILE A 542 -6.551 -35.536 21.293 1.00 52.94 ATOM 197 CA ILE A 542 -7.409 -36.728 21.342 1.00 47.00 ATOM 198 C ILE A 542 -7.520 -37.335 19.946 1.00 49.63 ATOM 199 O ILE A 542 -7.462 -38.563 19.799 1.00 43.95 ATOM 200 CB ILE A 542 -8.808 -36.437 21.904 1.00 58.70 ATOM 201 CG1 ILE A 542 -8.736 -36.254 23.424 1.00 72.63 ATOM 202 CG2 ILE A 542 -9.748 -37.576 21.594 1.00 63.08 ATOM 203 CD1 ILE A 542 -10.035 -35.770 24.048 1.00 84.04 ATOM 204 N HIS A 543 -7.656 -36.494 18.926 0.58 50.69 ATOM 205 CA HIS A 543 -7.572 -37.009 17.561 0.58 52.12 ATOM 206 C HIS A 543 -6.256 -37.757 17.325 0.58 61.76 ATOM 207 O HIS A 543 -6.239 -38.777 16.637 0.58 69.13 ATOM 208 CB HIS A 543 -7.719 -35.885 16.539 0.58 54.43 ATOM 209 CG HIS A 543 -7.702 -36.360 15.123 0.58 56.66 ATOM 210 ND1 HIS A 543 -8.785 -36.980 14.536 0.58 70.09 ATOM 211 CD2 HIS A 543 -6.734 -36.316 14.178 0.58 69.74 ATOM 212 CE1 HIS A 543 -8.484 -37.298 13.289 0.58 82.39 ATOM 213 NE2 HIS A 543 -7.246 -36.905 13.046 0.58 84.34 ATOM 214 N HIS A 544 -5.149 -37.266 17.884 1.00 59.40 ATOM 215 CA HIS A 544 -3.875 -38.027 17.754 1.00 52.72 ATOM 216 C HIS A 544 -3.907 -39.428 18.399 1.00 56.22 ATOM 217 O HIS A 544 -3.343 -40.382 17.857 1.00 56.48 ATOM 218 CB HIS A 544 -2.679 -37.279 18.364 1.00 54.76 ATOM 219 CG HIS A 544 -2.065 -36.253 17.461 1.00 60.35 ATOM 220 ND1 HIS A 544 -1.361 -36.586 16.324 1.00 56.64 ATOM 221 CD2 HIS A 544 -2.051 -34.899 17.528 1.00 44.78 ATOM 222 CE1 HIS A 544 -0.930 -35.483 15.735 1.00 54.06 ATOM 223 NE2 HIS A 544 -1.341 -34.447 16.442 1.00 65.84 ATOM 224 ZN ZN A 702 -0.962 -32.424 16.638 1.00 60.48 TER