HEADER TRANSCRIPTION/DNA 31-DEC-69 5VMW TITLE Kaiso (ZBTB33) zinc finger DNA binding domain in complex with a TITLE 2 double CpG-methylated DNA resembling the specific Kaiso binding TITLE 3 sequence (KBS) COMPND MOL_ID: 1; COMPND 2 MOLECULE: Transcriptional regulator Kaiso; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: residues ; COMPND 5 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.40 ANGSTORMS DBREF 5VMW A 471 604 UNP Q86T24 KAISO_HUMAN 471 604 SEQRES 1 A 25 LYS LYS TYR PRO CYS ARG TYR CYS GLU LYS VAL PHE PRO SEQRES 2 A 25 LEU ALA GLU TYR ARG THR LYS HIS GLU ILE HIS HIS ATOM 1 N LYS A 520 45.170 384.391 24.694 1.00 72.41 ATOM 2 CA LYS A 520 44.916 385.768 25.115 1.00 72.90 ATOM 3 C LYS A 520 44.943 386.692 23.920 1.00 69.07 ATOM 4 O LYS A 520 45.802 386.572 23.048 1.00 74.39 ATOM 5 CB LYS A 520 45.936 386.240 26.148 1.00 75.31 ATOM 6 CG LYS A 520 45.862 385.484 27.454 1.00 88.96 ATOM 7 CD LYS A 520 46.224 386.383 28.620 1.00101.24 ATOM 8 CE LYS A 520 46.000 385.670 29.950 1.00114.23 ATOM 9 NZ LYS A 520 46.325 386.535 31.123 1.00118.38 ATOM 10 N LYS A 521 43.990 387.610 23.880 1.00 72.42 ATOM 11 CA LYS A 521 43.982 388.643 22.863 1.00 75.09 ATOM 12 C LYS A 521 44.397 389.976 23.477 1.00 76.36 ATOM 13 O LYS A 521 43.953 390.336 24.573 1.00 76.41 ATOM 14 CB LYS A 521 42.597 388.771 22.226 1.00 69.19 ATOM 15 CG LYS A 521 42.017 387.481 21.709 1.00 82.30 ATOM 16 CD LYS A 521 42.502 387.142 20.308 1.00 93.97 ATOM 17 CE LYS A 521 41.764 385.906 19.770 1.00104.34 ATOM 18 NZ LYS A 521 42.189 385.512 18.394 1.00106.71 ATOM 19 N TYR A 522 45.248 390.710 22.770 1.00 67.52 ATOM 20 CA TYR A 522 45.509 392.101 23.134 1.00 67.72 ATOM 21 C TYR A 522 45.027 393.042 22.020 1.00 57.46 ATOM 22 O TYR A 522 45.761 393.345 21.082 1.00 54.89 ATOM 23 CB TYR A 522 46.992 392.300 23.437 1.00 55.91 ATOM 24 CG TYR A 522 47.474 391.386 24.532 1.00 53.80 ATOM 25 CD1 TYR A 522 47.324 391.736 25.872 1.00 55.93 ATOM 26 CD2 TYR A 522 48.068 390.160 24.229 1.00 55.24 ATOM 27 CE1 TYR A 522 47.760 390.889 26.884 1.00 60.17 ATOM 28 CE2 TYR A 522 48.510 389.305 25.229 1.00 54.86 ATOM 29 CZ TYR A 522 48.355 389.670 26.552 1.00 63.23 ATOM 30 OH TYR A 522 48.795 388.818 27.543 1.00 63.04 ATOM 31 N PRO A 523 43.766 393.471 22.106 1.00 56.86 ATOM 32 CA PRO A 523 43.155 394.315 21.072 1.00 67.36 ATOM 33 C PRO A 523 43.555 395.776 21.229 1.00 70.25 ATOM 34 O PRO A 523 43.628 396.229 22.372 1.00 61.96 ATOM 35 CB PRO A 523 41.662 394.133 21.320 1.00 65.31 ATOM 36 CG PRO A 523 41.565 393.894 22.802 1.00 64.09 ATOM 37 CD PRO A 523 42.838 393.190 23.216 1.00 65.60 ATOM 38 N CYS A 524 43.832 396.481 20.127 1.00 76.97 ATOM 39 CA CYS A 524 44.084 397.929 20.171 1.00 66.54 ATOM 40 C CYS A 524 42.811 398.673 20.527 1.00 59.07 ATOM 41 O CYS A 524 41.770 398.500 19.887 1.00 60.47 ATOM 42 CB CYS A 524 44.625 398.456 18.839 1.00 67.49 ATOM 43 SG CYS A 524 44.731 400.291 18.754 1.00 48.15 ATOM 44 N ARG A 525 42.895 399.502 21.555 1.00 64.35 ATOM 45 CA ARG A 525 41.730 400.253 22.023 1.00 77.24 ATOM 46 C ARG A 525 41.432 401.491 21.174 1.00 67.99 ATOM 47 O ARG A 525 40.495 402.238 21.458 1.00 71.91 ATOM 48 CB ARG A 525 41.944 400.646 23.476 1.00 80.90 ATOM 49 CG ARG A 525 42.497 399.481 24.296 1.00 94.95 ATOM 50 CD ARG A 525 42.850 399.957 25.680 1.00104.07 ATOM 51 NE ARG A 525 43.468 398.945 26.538 1.00 93.51 ATOM 52 CZ ARG A 525 44.767 398.675 26.555 1.00 77.10 ATOM 53 NH1 ARG A 525 45.584 399.294 25.724 1.00 58.30 ATOM 54 NH2 ARG A 525 45.247 397.771 27.394 1.00 95.64 ATOM 55 N TYR A 526 42.215 401.684 20.118 1.00 65.61 ATOM 56 CA TYR A 526 42.044 402.822 19.224 1.00 52.67 ATOM 57 C TYR A 526 41.573 402.398 17.847 1.00 57.55 ATOM 58 O TYR A 526 41.026 403.203 17.093 1.00 72.47 ATOM 59 CB TYR A 526 43.355 403.601 19.094 1.00 49.47 ATOM 60 CG TYR A 526 43.808 404.202 20.397 1.00 63.33 ATOM 61 CD1 TYR A 526 43.467 405.506 20.746 1.00 62.48 ATOM 62 CD2 TYR A 526 44.557 403.460 21.295 1.00 70.78 ATOM 63 CE1 TYR A 526 43.882 406.057 21.952 1.00 62.61 ATOM 64 CE2 TYR A 526 44.972 403.999 22.496 1.00 71.79 ATOM 65 CZ TYR A 526 44.637 405.294 22.819 1.00 63.56 ATOM 66 OH TYR A 526 45.060 405.811 24.022 1.00 74.44 ATOM 67 N CYS A 527 41.807 401.140 17.503 1.00 63.60 ATOM 68 CA CYS A 527 41.346 400.626 16.229 1.00 63.98 ATOM 69 C CYS A 527 41.059 399.136 16.310 1.00 79.26 ATOM 70 O CYS A 527 40.837 398.580 17.386 1.00 78.76 ATOM 71 CB CYS A 527 42.370 400.900 15.127 1.00 57.19 ATOM 72 SG CYS A 527 43.821 399.774 15.114 1.00 67.81 ATOM 73 N GLU A 528 41.072 398.506 15.144 1.00 86.19 ATOM 74 CA GLU A 528 40.655 397.125 14.972 1.00 98.67 ATOM 75 C GLU A 528 41.647 396.125 15.548 1.00 83.54 ATOM 76 O GLU A 528 41.257 395.165 16.206 1.00 75.28 ATOM 77 CB GLU A 528 40.460 396.849 13.480 1.00116.35 ATOM 78 CG GLU A 528 41.631 397.376 12.639 1.00124.60 ATOM 79 CD GLU A 528 41.464 397.155 11.149 1.00136.30 ATOM 80 OE1 GLU A 528 40.429 396.584 10.735 1.00144.63 ATOM 81 OE2 GLU A 528 42.377 397.555 10.393 1.00133.93 ATOM 82 N LYS A 529 42.931 396.382 15.310 1.00 72.32 ATOM 83 CA LYS A 529 43.965 395.365 15.426 1.00 70.25 ATOM 84 C LYS A 529 44.041 394.640 16.766 1.00 71.35 ATOM 85 O LYS A 529 43.688 395.181 17.812 1.00 64.23 ATOM 86 CB LYS A 529 45.319 395.987 15.106 1.00 57.43 ATOM 87 CG LYS A 529 45.342 396.611 13.739 1.00 65.63 ATOM 88 CD LYS A 529 46.753 396.853 13.282 1.00 74.59 ATOM 89 CE LYS A 529 46.748 397.449 11.887 1.00 89.61 ATOM 90 NZ LYS A 529 48.113 397.844 11.447 1.00 94.55 ATOM 91 N VAL A 530 44.485 393.386 16.699 1.00 72.15 ATOM 92 CA VAL A 530 44.713 392.563 17.877 1.00 63.26 ATOM 93 C VAL A 530 46.167 392.078 17.864 1.00 68.76 ATOM 94 O VAL A 530 46.757 391.927 16.794 1.00 72.19 ATOM 95 CB VAL A 530 43.717 391.402 17.906 1.00 68.11 ATOM 96 CG1 VAL A 530 43.857 390.574 19.172 1.00 67.52 ATOM 97 CG2 VAL A 530 42.320 391.971 17.810 1.00 72.16 ATOM 98 N PHE A 531 46.757 391.875 19.043 1.00 69.16 ATOM 99 CA PHE A 531 48.160 391.457 19.161 1.00 59.04 ATOM 100 C PHE A 531 48.325 390.285 20.119 1.00 59.19 ATOM 101 O PHE A 531 47.623 390.217 21.122 1.00 66.04 ATOM 102 CB PHE A 531 49.021 392.628 19.640 1.00 68.05 ATOM 103 CG PHE A 531 48.927 393.842 18.767 1.00 66.17 ATOM 104 CD1 PHE A 531 47.986 394.825 19.023 1.00 62.64 ATOM 105 CD2 PHE A 531 49.783 393.996 17.687 1.00 52.79 ATOM 106 CE1 PHE A 531 47.896 395.940 18.216 1.00 57.56 ATOM 107 CE2 PHE A 531 49.703 395.095 16.877 1.00 47.10 ATOM 108 CZ PHE A 531 48.753 396.073 17.137 1.00 54.54 ATOM 109 N PRO A 532 49.262 389.362 19.822 1.00 61.67 ATOM 110 CA PRO A 532 49.504 388.183 20.667 1.00 67.75 ATOM 111 C PRO A 532 50.393 388.473 21.883 1.00 66.19 ATOM 112 O PRO A 532 50.577 387.583 22.726 1.00 71.36 ATOM 113 CB PRO A 532 50.212 387.222 19.714 1.00 68.38 ATOM 114 CG PRO A 532 50.989 388.146 18.825 1.00 54.38 ATOM 115 CD PRO A 532 50.097 389.335 18.609 1.00 54.04 ATOM 116 N LEU A 533 50.952 389.683 21.945 1.00 54.04 ATOM 117 CA LEU A 533 51.785 390.123 23.066 1.00 49.42 ATOM 118 C LEU A 533 51.353 391.493 23.515 1.00 56.12 ATOM 119 O LEU A 533 51.173 392.397 22.703 1.00 52.70 ATOM 120 CB LEU A 533 53.274 390.180 22.696 1.00 50.18 ATOM 121 CG LEU A 533 54.199 388.961 22.884 1.00 58.58 ATOM 122 CD1 LEU A 533 53.738 387.799 22.057 1.00 48.30 ATOM 123 CD2 LEU A 533 55.633 389.319 22.518 1.00 41.49 ATOM 124 N ALA A 534 51.220 391.653 24.820 1.00 57.31 ATOM 125 CA ALA A 534 50.870 392.932 25.396 1.00 49.59 ATOM 126 C ALA A 534 51.777 394.066 24.883 1.00 52.38 ATOM 127 O ALA A 534 51.285 395.138 24.515 1.00 46.98 ATOM 128 CB ALA A 534 50.928 392.839 26.915 1.00 51.83 ATOM 129 N GLU A 535 53.086 393.824 24.821 1.00 47.40 ATOM 130 CA GLU A 535 54.026 394.886 24.450 1.00 46.04 ATOM 131 C GLU A 535 53.870 395.289 22.984 1.00 52.75 ATOM 132 O GLU A 535 54.196 396.416 22.616 1.00 61.29 ATOM 133 CB GLU A 535 55.475 394.459 24.718 1.00 45.55 ATOM 134 CG GLU A 535 55.952 393.371 23.781 1.00 50.67 ATOM 135 CD GLU A 535 57.453 393.110 23.848 1.00 53.53 ATOM 136 OE1 GLU A 535 57.931 392.666 24.912 1.00 41.52 ATOM 137 OE2 GLU A 535 58.143 393.324 22.827 1.00 51.20 ATOM 138 N TYR A 536 53.385 394.377 22.141 1.00 43.72 ATOM 139 CA TYR A 536 53.173 394.715 20.740 1.00 40.65 ATOM 140 C TYR A 536 52.036 395.714 20.647 1.00 47.82 ATOM 141 O TYR A 536 52.102 396.665 19.867 1.00 44.11 ATOM 142 CB TYR A 536 52.855 393.487 19.883 1.00 50.57 ATOM 143 CG TYR A 536 53.992 392.506 19.720 1.00 50.69 ATOM 144 CD1 TYR A 536 55.253 392.782 20.223 1.00 53.36 ATOM 145 CD2 TYR A 536 53.794 391.288 19.078 1.00 50.51 ATOM 146 CE1 TYR A 536 56.293 391.874 20.084 1.00 51.67 ATOM 147 CE2 TYR A 536 54.825 390.376 18.933 1.00 51.17 ATOM 148 CZ TYR A 536 56.070 390.673 19.440 1.00 55.13 ATOM 149 OH TYR A 536 57.103 389.777 19.303 1.00 52.38 ATOM 150 N ARG A 537 50.995 395.499 21.446 1.00 37.99 ATOM 151 CA ARG A 537 49.894 396.432 21.462 1.00 43.92 ATOM 152 C ARG A 537 50.342 397.809 21.971 1.00 50.53 ATOM 153 O ARG A 537 49.910 398.845 21.470 1.00 52.03 ATOM 154 CB ARG A 537 48.745 395.928 22.328 1.00 41.80 ATOM 155 CG ARG A 537 47.682 396.999 22.498 1.00 43.76 ATOM 156 CD ARG A 537 46.528 396.524 23.305 1.00 56.09 ATOM 157 NE ARG A 537 46.940 396.102 24.637 1.00 60.26 ATOM 158 CZ ARG A 537 46.114 395.563 25.526 1.00 55.15 ATOM 159 NH1 ARG A 537 44.834 395.380 25.219 1.00 60.74 ATOM 160 NH2 ARG A 537 46.560 395.216 26.724 1.00 53.81 ATOM 161 N THR A 538 51.199 397.806 22.977 1.00 44.07 ATOM 162 CA THR A 538 51.573 399.040 23.618 1.00 44.27 ATOM 163 C THR A 538 52.377 399.903 22.657 1.00 43.49 ATOM 164 O THR A 538 52.124 401.084 22.520 1.00 55.49 ATOM 165 CB THR A 538 52.366 398.786 24.894 1.00 48.62 ATOM 166 OG1 THR A 538 51.570 398.011 25.804 1.00 45.01 ATOM 167 CG2 THR A 538 52.757 400.117 25.547 1.00 43.63 ATOM 168 N LYS A 539 53.326 399.302 21.960 1.00 48.72 ATOM 169 CA LYS A 539 54.075 400.032 20.947 1.00 53.15 ATOM 170 C LYS A 539 53.115 400.552 19.883 1.00 55.67 ATOM 171 O LYS A 539 53.272 401.642 19.357 1.00 53.99 ATOM 172 CB LYS A 539 55.147 399.138 20.315 1.00 51.45 ATOM 173 CG LYS A 539 56.211 398.652 21.296 1.00 55.39 ATOM 174 CD LYS A 539 56.991 399.818 21.875 1.00 63.09 ATOM 175 CE LYS A 539 57.715 399.413 23.144 1.00 77.35 ATOM 176 NZ LYS A 539 57.391 400.311 24.307 1.00 84.70 ATOM 177 N HIS A 540 52.103 399.761 19.576 1.00 51.61 ATOM 178 CA HIS A 540 51.155 400.141 18.551 1.00 50.51 ATOM 179 C HIS A 540 50.312 401.352 18.950 1.00 56.38 ATOM 180 O HIS A 540 50.059 402.250 18.145 1.00 56.56 ATOM 181 CB HIS A 540 50.247 398.970 18.242 1.00 36.87 ATOM 182 CG HIS A 540 49.101 399.327 17.363 1.00 39.40 ATOM 183 ND1 HIS A 540 49.250 399.536 16.012 1.00 48.88 ATOM 184 CD2 HIS A 540 47.789 399.506 17.633 1.00 41.58 ATOM 185 CE1 HIS A 540 48.077 399.825 15.483 1.00 44.40 ATOM 186 NE2 HIS A 540 47.173 399.813 16.445 1.00 51.76 ATOM 187 N GLU A 541 49.882 401.366 20.203 1.00 47.73 ATOM 188 CA GLU A 541 48.999 402.408 20.676 1.00 50.34 ATOM 189 C GLU A 541 49.709 403.747 20.820 1.00 48.66 ATOM 190 O GLU A 541 49.088 404.799 20.674 1.00 58.63 ATOM 191 CB GLU A 541 48.364 401.976 21.991 1.00 54.70 ATOM 192 CG GLU A 541 47.340 400.878 21.776 1.00 65.61 ATOM 193 CD GLU A 541 46.646 400.463 23.038 1.00 66.53 ATOM 194 OE1 GLU A 541 47.239 400.666 24.114 1.00 71.25 ATOM 195 OE2 GLU A 541 45.520 399.917 22.951 1.00 67.63 ATOM 196 N ILE A 542 51.012 403.713 21.086 1.00 42.29 ATOM 197 CA ILE A 542 51.792 404.948 21.179 1.00 43.24 ATOM 198 C ILE A 542 51.882 405.634 19.808 1.00 47.17 ATOM 199 O ILE A 542 51.826 406.852 19.721 1.00 46.21 ATOM 200 CB ILE A 542 53.170 404.676 21.776 1.00 51.49 ATOM 201 CG1 ILE A 542 53.017 404.582 23.296 1.00 67.37 ATOM 202 CG2 ILE A 542 54.117 405.789 21.470 1.00 53.86 ATOM 203 CD1 ILE A 542 54.154 403.901 24.007 1.00 70.37 ATOM 204 N HIS A 543 51.971 404.838 18.750 0.52 50.77 ATOM 205 CA HIS A 543 51.887 405.348 17.385 0.52 50.86 ATOM 206 C HIS A 543 50.530 406.026 17.088 0.52 55.04 ATOM 207 O HIS A 543 50.445 406.892 16.215 0.52 63.42 ATOM 208 CB HIS A 543 52.168 404.200 16.408 0.52 51.71 ATOM 209 CG HIS A 543 51.741 404.466 15.001 0.52 61.86 ATOM 210 ND1 HIS A 543 50.487 404.135 14.531 0.52 79.01 ATOM 211 CD2 HIS A 543 52.406 405.004 13.951 0.52 71.88 ATOM 212 CE1 HIS A 543 50.393 404.472 13.257 0.52 85.16 ATOM 213 NE2 HIS A 543 51.544 405.002 12.880 0.52 83.82 ATOM 214 N HIS A 544 49.476 405.652 17.814 1.00 49.71 ATOM 215 CA HIS A 544 48.167 406.324 17.678 1.00 47.96 ATOM 216 C HIS A 544 48.199 407.738 18.306 1.00 44.30 ATOM 217 O HIS A 544 47.594 408.668 17.777 1.00 52.02 ATOM 218 CB HIS A 544 47.019 405.520 18.331 1.00 43.46 ATOM 219 CG HIS A 544 46.390 404.471 17.448 1.00 64.98 ATOM 220 ND1 HIS A 544 45.628 404.774 16.339 1.00 61.09 ATOM 221 CD2 HIS A 544 46.378 403.117 17.543 1.00 56.95 ATOM 222 CE1 HIS A 544 45.189 403.658 15.781 1.00 48.78 ATOM 223 NE2 HIS A 544 45.632 402.638 16.491 1.00 63.95 ATOM 224 ZN ZN A 702 45.312 400.574 16.662 1.00 57.47 TER