HEADER TRANSFERASE 31-DEC-69 5VO0 TITLE Structure of a TRAF6-Ubc13~Ub complex COMPND MOL_ID: 1; COMPND 2 MOLECULE: TNF receptor-associated factor 6; COMPND 3 CHAIN: A, D; COMPND 4 EC: 2.3.2.27; COMPND 5 FRAGMENT: residues ; COMPND 6 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 3.90 ANGSTORMS DBREF 5VO0 A 50 221 PDB 5VO0 5VO0 50 221 SEQRES 1 A 28 LEU THR VAL LYS CYS SER ASN PHE GLY CYS SER GLU LYS SEQRES 2 A 28 MET GLU LEU ARG GLN LEU GLU LYS HIS LEU SER GLN CYS SEQRES 3 A 28 ARG PHE ATOM 1 N LEU A 131 39.191 -21.475 93.016 1.00105.91 ATOM 2 CA LEU A 131 37.889 -21.630 93.685 1.00109.24 ATOM 3 C LEU A 131 36.777 -21.304 92.704 1.00110.48 ATOM 4 O LEU A 131 36.858 -20.320 91.962 1.00112.09 ATOM 5 CB LEU A 131 37.731 -20.734 94.925 1.00112.13 ATOM 6 CG LEU A 131 38.315 -21.232 96.258 1.00113.87 ATOM 7 CD1 LEU A 131 39.680 -20.616 96.482 1.00114.97 ATOM 8 CD2 LEU A 131 37.412 -20.919 97.449 1.00113.39 ATOM 9 N THR A 132 35.736 -22.126 92.719 1.00112.49 ATOM 10 CA THR A 132 34.593 -21.923 91.847 1.00115.34 ATOM 11 C THR A 132 33.694 -20.814 92.417 1.00113.92 ATOM 12 O THR A 132 33.527 -20.706 93.635 1.00112.12 ATOM 13 CB THR A 132 33.814 -23.236 91.643 1.00119.73 ATOM 14 OG1 THR A 132 33.557 -23.849 92.913 1.00124.11 ATOM 15 CG2 THR A 132 34.626 -24.201 90.781 1.00119.95 ATOM 16 N VAL A 133 33.151 -19.983 91.526 1.00115.34 ATOM 17 CA VAL A 133 32.320 -18.822 91.891 1.00117.83 ATOM 18 C VAL A 133 31.092 -18.731 90.975 1.00126.63 ATOM 19 O VAL A 133 31.064 -19.357 89.911 1.00132.55 ATOM 20 CB VAL A 133 33.128 -17.498 91.817 1.00113.00 ATOM 21 CG1 VAL A 133 34.370 -17.580 92.693 1.00111.48 ATOM 22 CG2 VAL A 133 33.529 -17.154 90.385 1.00111.92 ATOM 23 N LYS A 134 30.093 -17.950 91.392 1.00134.13 ATOM 24 CA LYS A 134 28.892 -17.693 90.579 1.00140.25 ATOM 25 C LYS A 134 28.946 -16.313 89.930 1.00148.31 ATOM 26 O LYS A 134 29.715 -15.444 90.348 1.00149.50 ATOM 27 CB LYS A 134 27.614 -17.779 91.422 1.00141.04 ATOM 28 CG LYS A 134 27.521 -18.993 92.332 1.00142.89 ATOM 29 CD LYS A 134 26.081 -19.297 92.751 1.00144.01 ATOM 30 CE LYS A 134 25.977 -19.764 94.200 1.00144.24 ATOM 31 NZ LYS A 134 25.100 -20.955 94.369 1.00145.53 ATOM 32 N CYS A 135 28.107 -16.118 88.915 1.00158.82 ATOM 33 CA CYS A 135 27.928 -14.803 88.292 1.00166.50 ATOM 34 C CYS A 135 27.315 -13.815 89.278 1.00171.99 ATOM 35 O CYS A 135 26.670 -14.210 90.253 1.00171.49 ATOM 36 CB CYS A 135 26.981 -14.888 87.104 1.00167.45 ATOM 37 SG CYS A 135 27.561 -15.668 85.578 1.00170.23 ATOM 38 N SER A 136 27.493 -12.532 88.981 1.00179.04 ATOM 39 CA SER A 136 26.924 -11.445 89.782 1.00184.52 ATOM 40 C SER A 136 25.851 -10.593 89.072 1.00189.07 ATOM 41 O SER A 136 25.246 -9.738 89.723 1.00190.89 ATOM 42 CB SER A 136 28.056 -10.559 90.313 1.00185.69 ATOM 43 OG SER A 136 28.930 -10.160 89.271 1.00187.26 ATOM 44 N ASN A 137 25.610 -10.812 87.771 1.00191.87 ATOM 45 CA ASN A 137 24.429 -10.231 87.105 1.00192.05 ATOM 46 C ASN A 137 23.197 -11.056 87.498 1.00197.47 ATOM 47 O ASN A 137 23.346 -12.144 88.055 1.00196.18 ATOM 48 CB ASN A 137 24.609 -10.136 85.582 1.00188.51 ATOM 49 CG ASN A 137 25.606 -9.059 85.167 1.00182.43 ATOM 50 OD1 ASN A 137 26.529 -9.322 84.392 1.00177.16 ATOM 51 ND2 ASN A 137 25.420 -7.842 85.671 1.00177.05 ATOM 52 N PHE A 138 21.997 -10.529 87.229 1.00204.73 ATOM 53 CA PHE A 138 20.757 -10.975 87.916 1.00212.62 ATOM 54 C PHE A 138 20.423 -12.480 87.826 1.00214.10 ATOM 55 O PHE A 138 20.663 -13.210 88.792 1.00213.35 ATOM 56 CB PHE A 138 19.552 -10.111 87.495 1.00217.97 ATOM 57 CG PHE A 138 18.341 -10.280 88.380 1.00223.07 ATOM 58 CD1 PHE A 138 18.325 -9.741 89.665 1.00224.18 ATOM 59 CD2 PHE A 138 17.216 -10.973 87.933 1.00222.56 ATOM 60 CE1 PHE A 138 17.214 -9.892 90.488 1.00221.70 ATOM 61 CE2 PHE A 138 16.103 -11.126 88.752 1.00220.89 ATOM 62 CZ PHE A 138 16.102 -10.584 90.030 1.00220.58 ATOM 63 N GLY A 139 19.893 -12.945 86.690 1.00216.15 ATOM 64 CA GLY A 139 19.431 -14.338 86.550 1.00215.96 ATOM 65 C GLY A 139 20.427 -15.354 85.999 1.00216.00 ATOM 66 O GLY A 139 20.014 -16.400 85.485 1.00218.74 ATOM 67 N CYS A 140 21.725 -15.060 86.108 1.00208.37 ATOM 68 CA CYS A 140 22.785 -15.874 85.503 1.00196.92 ATOM 69 C CYS A 140 22.807 -17.333 85.964 1.00193.48 ATOM 70 O CYS A 140 22.521 -18.236 85.180 1.00197.11 ATOM 71 CB CYS A 140 24.144 -15.277 85.834 1.00187.34 ATOM 72 SG CYS A 140 24.620 -13.725 85.052 1.00184.90 ATOM 73 N SER A 141 23.178 -17.541 87.230 1.00188.50 ATOM 74 CA SER A 141 23.386 -18.868 87.829 1.00187.28 ATOM 75 C SER A 141 24.417 -19.811 87.150 1.00183.64 ATOM 76 O SER A 141 24.400 -21.016 87.409 1.00176.89 ATOM 77 CB SER A 141 22.034 -19.577 88.023 1.00188.71 ATOM 78 OG SER A 141 21.484 -20.028 86.798 1.00193.03 ATOM 79 N GLU A 142 25.315 -19.278 86.317 1.00182.19 ATOM 80 CA GLU A 142 26.435 -20.068 85.782 1.00180.72 ATOM 81 C GLU A 142 27.536 -20.132 86.844 1.00176.63 ATOM 82 O GLU A 142 27.731 -19.165 87.584 1.00181.88 ATOM 83 CB GLU A 142 26.994 -19.460 84.484 1.00183.81 ATOM 84 CG GLU A 142 26.054 -19.536 83.283 1.00187.41 ATOM 85 CD GLU A 142 26.749 -19.982 82.004 1.00191.15 ATOM 86 OE1 GLU A 142 27.310 -21.098 81.986 1.00192.88 ATOM 87 OE2 GLU A 142 26.724 -19.224 81.011 1.00194.68 ATOM 88 N LYS A 143 28.236 -21.267 86.925 1.00167.06 ATOM 89 CA LYS A 143 29.383 -21.438 87.838 1.00157.25 ATOM 90 C LYS A 143 30.685 -21.609 87.055 1.00150.15 ATOM 91 O LYS A 143 30.675 -22.102 85.926 1.00152.38 ATOM 92 CB LYS A 143 29.167 -22.635 88.770 1.00155.57 ATOM 93 CG LYS A 143 27.962 -22.488 89.687 1.00155.38 ATOM 94 CD LYS A 143 27.941 -23.536 90.792 1.00152.16 ATOM 95 CE LYS A 143 26.605 -23.530 91.522 1.00147.99 ATOM 96 NZ LYS A 143 26.604 -24.384 92.741 1.00143.66 ATOM 97 N MET A 144 31.799 -21.204 87.663 1.00141.63 ATOM 98 CA MET A 144 33.106 -21.194 86.990 1.00136.84 ATOM 99 C MET A 144 34.246 -20.988 87.982 1.00133.63 ATOM 100 O MET A 144 34.013 -20.517 89.092 1.00132.81 ATOM 101 CB MET A 144 33.150 -20.049 85.974 1.00136.17 ATOM 102 CG MET A 144 33.111 -18.666 86.617 1.00137.66 ATOM 103 SD MET A 144 32.329 -17.408 85.598 1.00139.79 ATOM 104 CE MET A 144 30.609 -17.882 85.764 1.00142.05 ATOM 105 N GLU A 145 35.472 -21.316 87.568 1.00132.83 ATOM 106 CA GLU A 145 36.679 -20.896 88.299 1.00134.29 ATOM 107 C GLU A 145 36.750 -19.366 88.283 1.00128.90 ATOM 108 O GLU A 145 36.532 -18.756 87.236 1.00131.67 ATOM 109 CB GLU A 145 37.967 -21.479 87.676 1.00140.43 ATOM 110 CG GLU A 145 38.287 -22.918 88.089 1.00145.34 ATOM 111 CD GLU A 145 39.579 -23.477 87.483 1.00147.21 ATOM 112 OE1 GLU A 145 40.507 -22.699 87.167 1.00149.17 ATOM 113 OE2 GLU A 145 39.676 -24.717 87.337 1.00147.18 ATOM 114 N LEU A 146 37.057 -18.760 89.433 1.00121.35 ATOM 115 CA LEU A 146 37.146 -17.293 89.565 1.00115.04 ATOM 116 C LEU A 146 37.943 -16.613 88.455 1.00113.15 ATOM 117 O LEU A 146 37.557 -15.543 87.988 1.00112.77 ATOM 118 CB LEU A 146 37.754 -16.905 90.917 1.00114.79 ATOM 119 CG LEU A 146 37.959 -15.405 91.196 1.00115.40 ATOM 120 CD1 LEU A 146 36.636 -14.654 91.233 1.00114.47 ATOM 121 CD2 LEU A 146 38.721 -15.187 92.494 1.00116.66 ATOM 122 N ARG A 147 39.057 -17.227 88.064 1.00115.26 ATOM 123 CA ARG A 147 39.928 -16.700 86.999 1.00120.67 ATOM 124 C ARG A 147 39.198 -16.127 85.779 1.00124.17 ATOM 125 O ARG A 147 39.525 -15.026 85.328 1.00123.72 ATOM 126 CB ARG A 147 40.945 -17.761 86.549 1.00121.85 ATOM 127 CG ARG A 147 42.381 -17.394 86.874 1.00124.04 ATOM 128 CD ARG A 147 43.321 -18.568 86.799 1.00123.70 ATOM 129 NE ARG A 147 43.467 -19.285 88.059 1.00125.44 ATOM 130 CZ ARG A 147 42.708 -20.288 88.486 1.00127.83 ATOM 131 NH1 ARG A 147 41.641 -20.723 87.815 1.00129.26 ATOM 132 NH2 ARG A 147 43.008 -20.815 89.646 1.00129.26 ATOM 133 N GLN A 148 38.210 -16.862 85.265 1.00128.78 ATOM 134 CA GLN A 148 37.457 -16.413 84.081 1.00132.04 ATOM 135 C GLN A 148 36.109 -15.728 84.395 1.00136.15 ATOM 136 O GLN A 148 35.208 -15.730 83.549 1.00142.52 ATOM 137 CB GLN A 148 37.310 -17.541 83.025 1.00130.88 ATOM 138 CG GLN A 148 36.206 -18.589 83.226 1.00129.18 ATOM 139 CD GLN A 148 36.662 -19.838 83.952 1.00128.36 ATOM 140 OE1 GLN A 148 37.640 -19.823 84.699 1.00128.92 ATOM 141 NE2 GLN A 148 35.941 -20.933 83.740 1.00126.47 ATOM 142 N LEU A 149 35.975 -15.115 85.576 1.00138.37 ATOM 143 CA LEU A 149 34.782 -14.310 85.891 1.00141.73 ATOM 144 C LEU A 149 34.690 -13.086 84.978 1.00146.65 ATOM 145 O LEU A 149 33.605 -12.774 84.476 1.00149.76 ATOM 146 CB LEU A 149 34.771 -13.851 87.355 1.00141.72 ATOM 147 CG LEU A 149 33.522 -13.080 87.815 1.00141.22 ATOM 148 CD1 LEU A 149 32.340 -14.019 88.021 1.00139.13 ATOM 149 CD2 LEU A 149 33.810 -12.298 89.089 1.00141.10 ATOM 150 N GLU A 150 35.822 -12.403 84.781 1.00150.09 ATOM 151 CA GLU A 150 35.890 -11.243 83.879 1.00153.82 ATOM 152 C GLU A 150 35.643 -11.607 82.401 1.00155.84 ATOM 153 O GLU A 150 35.048 -10.817 81.661 1.00157.64 ATOM 154 CB GLU A 150 37.206 -10.461 84.045 1.00156.36 ATOM 155 CG GLU A 150 38.481 -11.156 83.558 1.00159.15 ATOM 156 CD GLU A 150 39.698 -10.232 83.515 1.00159.44 ATOM 157 OE1 GLU A 150 39.713 -9.210 84.238 1.00158.27 ATOM 158 OE2 GLU A 150 40.650 -10.528 82.754 1.00157.01 ATOM 159 N LYS A 151 36.109 -12.790 81.984 1.00155.65 ATOM 160 CA LYS A 151 35.846 -13.317 80.635 1.00152.49 ATOM 161 C LYS A 151 34.357 -13.543 80.429 1.00145.47 ATOM 162 O LYS A 151 33.797 -13.116 79.420 1.00147.92 ATOM 163 CB LYS A 151 36.576 -14.651 80.390 1.00155.15 ATOM 164 CG LYS A 151 38.105 -14.603 80.368 1.00158.55 ATOM 165 CD LYS A 151 38.694 -13.470 79.532 1.00161.33 ATOM 166 CE LYS A 151 38.201 -13.468 78.091 1.00162.62 ATOM 167 NZ LYS A 151 38.674 -12.256 77.367 1.00163.70 ATOM 168 N HIS A 152 33.729 -14.211 81.395 1.00137.71 ATOM 169 CA HIS A 152 32.301 -14.503 81.329 1.00136.26 ATOM 170 C HIS A 152 31.434 -13.243 81.458 1.00139.43 ATOM 171 O HIS A 152 30.435 -13.146 80.748 1.00148.67 ATOM 172 CB HIS A 152 31.895 -15.561 82.363 1.00135.02 ATOM 173 CG HIS A 152 30.413 -15.705 82.529 1.00135.55 ATOM 174 ND1 HIS A 152 29.644 -16.550 81.757 1.00135.11 ATOM 175 CD2 HIS A 152 29.557 -15.087 83.374 1.00139.37 ATOM 176 CE1 HIS A 152 28.378 -16.451 82.128 1.00138.83 ATOM 177 NE2 HIS A 152 28.298 -15.566 83.108 1.00141.00 ATOM 178 N LEU A 153 31.799 -12.291 82.328 1.00140.77 ATOM 179 CA LEU A 153 31.003 -11.045 82.472 1.00146.30 ATOM 180 C LEU A 153 31.095 -10.081 81.263 1.00149.44 ATOM 181 O LEU A 153 30.292 -9.145 81.160 1.00151.57 ATOM 182 CB LEU A 153 31.282 -10.317 83.802 1.00150.24 ATOM 183 CG LEU A 153 32.626 -9.616 84.053 1.00156.19 ATOM 184 CD1 LEU A 153 32.692 -8.197 83.487 1.00156.28 ATOM 185 CD2 LEU A 153 32.935 -9.582 85.548 1.00157.03 ATOM 186 N SER A 154 32.067 -10.295 80.371 1.00148.44 ATOM 187 CA SER A 154 32.065 -9.649 79.050 1.00147.61 ATOM 188 C SER A 154 30.966 -10.238 78.147 1.00153.74 ATOM 189 O SER A 154 30.279 -9.495 77.442 1.00155.69 ATOM 190 CB SER A 154 33.432 -9.782 78.371 1.00143.40 ATOM 191 OG SER A 154 34.442 -9.134 79.125 1.00138.24 ATOM 192 N GLN A 155 30.804 -11.566 78.190 1.00159.14 ATOM 193 CA GLN A 155 29.789 -12.297 77.397 1.00162.51 ATOM 194 C GLN A 155 28.534 -12.709 78.208 1.00163.73 ATOM 195 O GLN A 155 27.820 -13.642 77.823 1.00158.37 ATOM 196 CB GLN A 155 30.444 -13.551 76.780 1.00165.29 ATOM 197 CG GLN A 155 29.783 -14.082 75.502 1.00168.15 ATOM 198 CD GLN A 155 30.425 -15.363 74.976 1.00167.91 ATOM 199 OE1 GLN A 155 31.624 -15.588 75.139 1.00166.70 ATOM 200 NE2 GLN A 155 29.622 -16.204 74.330 1.00167.28 ATOM 201 N CYS A 156 28.253 -12.007 79.310 1.00168.41 ATOM 202 CA CYS A 156 27.171 -12.395 80.236 1.00171.47 ATOM 203 C CYS A 156 25.807 -11.905 79.744 1.00174.68 ATOM 204 O CYS A 156 25.713 -11.066 78.843 1.00169.97 ATOM 205 CB CYS A 156 27.482 -11.902 81.664 1.00168.64 ATOM 206 SG CYS A 156 26.326 -12.341 82.992 1.00164.94 ATOM 207 N ARG A 157 24.760 -12.449 80.358 1.00182.70 ATOM 208 CA ARG A 157 23.380 -12.304 79.894 1.00186.37 ATOM 209 C ARG A 157 22.743 -10.980 80.344 1.00187.90 ATOM 210 O ARG A 157 22.253 -10.212 79.513 1.00190.19 ATOM 211 CB ARG A 157 22.563 -13.509 80.394 1.00189.20 ATOM 212 CG ARG A 157 21.191 -13.686 79.759 1.00189.26 ATOM 213 CD ARG A 157 20.519 -15.003 80.147 1.00187.20 ATOM 214 NE ARG A 157 21.213 -16.196 79.640 1.00183.12 ATOM 215 CZ ARG A 157 22.096 -16.945 80.314 1.00178.17 ATOM 216 NH1 ARG A 157 22.462 -16.659 81.567 1.00178.15 ATOM 217 NH2 ARG A 157 22.637 -18.005 79.715 1.00174.56 ATOM 218 N PHE A 158 22.774 -10.718 81.651 1.00188.62 ATOM 219 CA PHE A 158 22.126 -9.548 82.261 1.00188.89 ATOM 220 C PHE A 158 23.167 -8.513 82.686 1.00180.35 ATOM 221 O PHE A 158 23.136 -7.362 82.245 1.00166.56 ATOM 222 CB PHE A 158 21.284 -9.972 83.475 1.00196.58 ATOM 223 CG PHE A 158 20.439 -11.198 83.240 1.00204.83 ATOM 224 CD1 PHE A 158 20.963 -12.474 83.458 1.00207.96 ATOM 225 CD2 PHE A 158 19.118 -11.083 82.805 1.00211.81 ATOM 226 CE1 PHE A 158 20.188 -13.604 83.243 1.00210.86 ATOM 227 CE2 PHE A 158 18.339 -12.214 82.589 1.00214.15 ATOM 228 CZ PHE A 158 18.876 -13.477 82.807 1.00212.57 ATOM 229 ZN ZN A 303 26.475 -14.531 83.829 1.00155.23 TER