HEADER TRANSFERASE 31-DEC-69 5VO0 TITLE Structure of a TRAF6-Ubc13~Ub complex COMPND MOL_ID: 1; COMPND 2 MOLECULE: TNF receptor-associated factor 6; COMPND 3 CHAIN: A, D; COMPND 4 EC: 2.3.2.27; COMPND 5 FRAGMENT: residues ; COMPND 6 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 3.90 ANGSTORMS DBREF 5VO0 D 50 221 PDB 5VO0 5VO0 50 221 SEQRES 1 D 27 LEU THR VAL LYS CYS SER ASN PHE GLY CYS SER GLU LYS SEQRES 2 D 27 MET GLU LEU ARG GLN LEU GLU LYS HIS LEU SER GLN CYS SEQRES 3 D 27 ARG ATOM 1 N LEU D 131 47.837 -30.786 111.026 1.00 69.09 ATOM 2 CA LEU D 131 47.386 -32.054 110.412 1.00 68.54 ATOM 3 C LEU D 131 47.443 -33.202 111.410 1.00 64.95 ATOM 4 O LEU D 131 48.427 -33.354 112.139 1.00 64.94 ATOM 5 CB LEU D 131 48.212 -32.455 109.174 1.00 70.06 ATOM 6 CG LEU D 131 47.794 -31.920 107.800 1.00 70.60 ATOM 7 CD1 LEU D 131 48.388 -30.551 107.584 1.00 70.68 ATOM 8 CD2 LEU D 131 48.223 -32.847 106.669 1.00 70.89 ATOM 9 N THR D 132 46.395 -34.016 111.418 1.00 61.43 ATOM 10 CA THR D 132 46.327 -35.141 112.327 1.00 61.46 ATOM 11 C THR D 132 47.225 -36.256 111.804 1.00 58.89 ATOM 12 O THR D 132 47.306 -36.470 110.599 1.00 56.54 ATOM 13 CB THR D 132 44.881 -35.629 112.517 1.00 64.07 ATOM 14 OG1 THR D 132 44.271 -35.832 111.241 1.00 67.23 ATOM 15 CG2 THR D 132 44.064 -34.596 113.294 1.00 65.08 ATOM 16 N VAL D 133 47.920 -36.925 112.723 1.00 60.62 ATOM 17 CA VAL D 133 48.883 -37.997 112.411 1.00 63.69 ATOM 18 C VAL D 133 48.775 -39.131 113.437 1.00 68.80 ATOM 19 O VAL D 133 48.248 -38.915 114.525 1.00 72.86 ATOM 20 CB VAL D 133 50.333 -37.470 112.415 1.00 62.23 ATOM 21 CG1 VAL D 133 50.501 -36.361 111.389 1.00 63.28 ATOM 22 CG2 VAL D 133 50.742 -36.958 113.791 1.00 61.25 ATOM 23 N LYS D 134 49.293 -40.317 113.104 1.00 72.77 ATOM 24 CA LYS D 134 49.241 -41.492 114.006 1.00 75.40 ATOM 25 C LYS D 134 50.602 -41.720 114.649 1.00 74.69 ATOM 26 O LYS D 134 51.617 -41.410 114.024 1.00 74.11 ATOM 27 CB LYS D 134 48.818 -42.743 113.228 1.00 79.89 ATOM 28 CG LYS D 134 47.650 -42.497 112.281 1.00 85.16 ATOM 29 CD LYS D 134 46.895 -43.767 111.899 1.00 89.51 ATOM 30 CE LYS D 134 47.694 -44.684 110.982 1.00 91.96 ATOM 31 NZ LYS D 134 46.829 -45.327 109.950 1.00 93.36 ATOM 32 N CYS D 135 50.640 -42.269 115.872 1.00 76.32 ATOM 33 CA CYS D 135 51.935 -42.566 116.527 1.00 80.20 ATOM 34 C CYS D 135 52.661 -43.589 115.692 1.00 82.33 ATOM 35 O CYS D 135 52.034 -44.426 115.040 1.00 84.11 ATOM 36 CB CYS D 135 51.851 -43.207 117.920 1.00 82.21 ATOM 37 SG CYS D 135 50.681 -42.677 119.195 1.00 89.63 ATOM 38 N SER D 136 53.982 -43.556 115.770 1.00 87.30 ATOM 39 CA SER D 136 54.826 -44.465 115.008 1.00 90.88 ATOM 40 C SER D 136 55.367 -45.649 115.823 1.00 91.43 ATOM 41 O SER D 136 56.137 -46.442 115.279 1.00 94.28 ATOM 42 CB SER D 136 55.974 -43.683 114.347 1.00 92.71 ATOM 43 OG SER D 136 56.853 -43.102 115.301 1.00 92.26 ATOM 44 N ASN D 137 54.975 -45.788 117.100 1.00 89.81 ATOM 45 CA ASN D 137 55.300 -47.011 117.860 1.00 90.05 ATOM 46 C ASN D 137 54.254 -48.073 117.485 1.00 86.95 ATOM 47 O ASN D 137 53.282 -47.758 116.787 1.00 85.34 ATOM 48 CB ASN D 137 55.370 -46.771 119.382 1.00 92.86 ATOM 49 CG ASN D 137 56.278 -45.611 119.764 1.00 93.53 ATOM 50 OD1 ASN D 137 55.830 -44.639 120.360 1.00 92.62 ATOM 51 ND2 ASN D 137 57.560 -45.715 119.430 1.00 95.70 ATOM 52 N PHE D 138 54.446 -49.315 117.935 1.00 84.77 ATOM 53 CA PHE D 138 53.709 -50.445 117.361 1.00 85.02 ATOM 54 C PHE D 138 52.206 -50.415 117.619 1.00 85.17 ATOM 55 O PHE D 138 51.445 -50.135 116.701 1.00 89.59 ATOM 56 CB PHE D 138 54.300 -51.790 117.788 1.00 87.02 ATOM 57 CG PHE D 138 53.812 -52.945 116.957 1.00 88.80 ATOM 58 CD1 PHE D 138 54.214 -53.083 115.630 1.00 90.72 ATOM 59 CD2 PHE D 138 52.944 -53.889 117.490 1.00 89.02 ATOM 60 CE1 PHE D 138 53.761 -54.143 114.856 1.00 91.54 ATOM 61 CE2 PHE D 138 52.489 -54.954 116.722 1.00 89.21 ATOM 62 CZ PHE D 138 52.896 -55.080 115.403 1.00 90.41 ATOM 63 N GLY D 139 51.778 -50.672 118.852 1.00 86.63 ATOM 64 CA GLY D 139 50.346 -50.840 119.147 1.00 91.86 ATOM 65 C GLY D 139 49.520 -49.581 119.378 1.00 96.61 ATOM 66 O GLY D 139 48.354 -49.681 119.773 1.00100.28 ATOM 67 N CYS D 140 50.100 -48.412 119.096 1.00101.34 ATOM 68 CA CYS D 140 49.586 -47.105 119.562 1.00103.16 ATOM 69 C CYS D 140 48.095 -46.852 119.386 1.00103.16 ATOM 70 O CYS D 140 47.410 -46.488 120.347 1.00106.98 ATOM 71 CB CYS D 140 50.356 -45.961 118.902 1.00104.26 ATOM 72 SG CYS D 140 51.851 -45.446 119.792 1.00104.25 ATOM 73 N SER D 141 47.620 -47.011 118.151 1.00101.01 ATOM 74 CA SER D 141 46.203 -46.829 117.794 1.00 99.43 ATOM 75 C SER D 141 45.609 -45.435 118.109 1.00 98.27 ATOM 76 O SER D 141 44.390 -45.308 118.261 1.00 96.74 ATOM 77 CB SER D 141 45.344 -47.938 118.439 1.00 97.48 ATOM 78 OG SER D 141 44.952 -47.622 119.766 1.00 94.34 ATOM 79 N GLU D 142 46.457 -44.406 118.182 1.00 97.76 ATOM 80 CA GLU D 142 46.034 -43.072 118.622 1.00 98.23 ATOM 81 C GLU D 142 46.420 -41.995 117.617 1.00 96.37 ATOM 82 O GLU D 142 47.392 -42.146 116.868 1.00 96.66 ATOM 83 CB GLU D 142 46.629 -42.751 119.999 1.00101.22 ATOM 84 CG GLU D 142 45.892 -41.641 120.747 1.00106.10 ATOM 85 CD GLU D 142 45.876 -41.839 122.257 1.00110.64 ATOM 86 OE1 GLU D 142 46.961 -42.026 122.849 1.00114.27 ATOM 87 OE2 GLU D 142 44.775 -41.800 122.854 1.00112.51 ATOM 88 N LYS D 143 45.640 -40.914 117.613 1.00 94.60 ATOM 89 CA LYS D 143 45.840 -39.783 116.709 1.00 92.12 ATOM 90 C LYS D 143 46.021 -38.477 117.476 1.00 88.59 ATOM 91 O LYS D 143 45.629 -38.357 118.638 1.00 91.88 ATOM 92 CB LYS D 143 44.657 -39.660 115.746 1.00 93.47 ATOM 93 CG LYS D 143 44.671 -40.684 114.627 1.00 94.41 ATOM 94 CD LYS D 143 43.318 -40.792 113.951 1.00 96.63 ATOM 95 CE LYS D 143 43.349 -41.811 112.827 1.00100.38 ATOM 96 NZ LYS D 143 42.007 -42.400 112.586 1.00103.70 ATOM 97 N MET D 144 46.616 -37.503 116.796 1.00 82.07 ATOM 98 CA MET D 144 46.924 -36.197 117.369 1.00 78.16 ATOM 99 C MET D 144 47.363 -35.274 116.247 1.00 77.71 ATOM 100 O MET D 144 47.636 -35.738 115.143 1.00 78.32 ATOM 101 CB MET D 144 48.073 -36.320 118.369 1.00 76.19 ATOM 102 CG MET D 144 49.417 -36.631 117.714 1.00 75.81 ATOM 103 SD MET D 144 50.434 -37.815 118.598 1.00 73.13 ATOM 104 CE MET D 144 49.457 -39.287 118.326 1.00 73.32 ATOM 105 N GLU D 145 47.488 -33.988 116.547 1.00 79.68 ATOM 106 CA GLU D 145 48.104 -33.043 115.614 1.00 82.26 ATOM 107 C GLU D 145 49.601 -33.321 115.540 1.00 76.99 ATOM 108 O GLU D 145 50.231 -33.577 116.565 1.00 73.94 ATOM 109 CB GLU D 145 47.890 -31.593 116.069 1.00 90.19 ATOM 110 CG GLU D 145 46.431 -31.146 116.124 1.00 96.47 ATOM 111 CD GLU D 145 46.243 -29.748 116.707 1.00101.96 ATOM 112 OE1 GLU D 145 47.247 -29.051 116.994 1.00104.42 ATOM 113 OE2 GLU D 145 45.072 -29.340 116.875 1.00108.27 ATOM 114 N LEU D 146 50.169 -33.247 114.337 1.00 74.62 ATOM 115 CA LEU D 146 51.622 -33.383 114.136 1.00 74.54 ATOM 116 C LEU D 146 52.448 -32.624 115.171 1.00 76.48 ATOM 117 O LEU D 146 53.494 -33.098 115.605 1.00 76.32 ATOM 118 CB LEU D 146 52.011 -32.900 112.736 1.00 73.96 ATOM 119 CG LEU D 146 53.499 -32.870 112.350 1.00 73.63 ATOM 120 CD1 LEU D 146 54.141 -34.240 112.507 1.00 73.37 ATOM 121 CD2 LEU D 146 53.673 -32.375 110.922 1.00 73.87 ATOM 122 N ARG D 147 51.971 -31.443 115.547 1.00 81.29 ATOM 123 CA ARG D 147 52.653 -30.587 116.524 1.00 85.09 ATOM 124 C ARG D 147 53.093 -31.337 117.776 1.00 84.95 ATOM 125 O ARG D 147 54.257 -31.261 118.163 1.00 84.03 ATOM 126 CB ARG D 147 51.758 -29.399 116.897 1.00 87.82 ATOM 127 CG ARG D 147 52.512 -28.099 117.090 1.00 90.45 ATOM 128 CD ARG D 147 51.641 -26.884 116.886 1.00 92.16 ATOM 129 NE ARG D 147 51.257 -26.638 115.493 1.00 94.66 ATOM 130 CZ ARG D 147 50.161 -27.099 114.894 1.00 99.57 ATOM 131 NH1 ARG D 147 49.332 -27.948 115.492 1.00100.17 ATOM 132 NH2 ARG D 147 49.949 -26.759 113.639 1.00103.66 ATOM 133 N GLN D 148 52.173 -32.093 118.369 1.00 86.57 ATOM 134 CA GLN D 148 52.467 -32.851 119.587 1.00 91.14 ATOM 135 C GLN D 148 52.765 -34.342 119.351 1.00 91.10 ATOM 136 O GLN D 148 52.416 -35.183 120.180 1.00 91.52 ATOM 137 CB GLN D 148 51.347 -32.663 120.633 1.00 95.33 ATOM 138 CG GLN D 148 49.974 -33.244 120.281 1.00 98.12 ATOM 139 CD GLN D 148 48.909 -32.190 119.999 1.00101.36 ATOM 140 OE1 GLN D 148 49.199 -31.116 119.464 1.00107.60 ATOM 141 NE2 GLN D 148 47.660 -32.502 120.349 1.00 98.68 ATOM 142 N LEU D 149 53.416 -34.681 118.240 1.00 94.36 ATOM 143 CA LEU D 149 53.908 -36.051 118.054 1.00 98.84 ATOM 144 C LEU D 149 55.084 -36.295 118.990 1.00102.73 ATOM 145 O LEU D 149 55.173 -37.351 119.610 1.00103.99 ATOM 146 CB LEU D 149 54.346 -36.312 116.612 1.00100.30 ATOM 147 CG LEU D 149 54.585 -37.793 116.276 1.00 98.96 ATOM 148 CD1 LEU D 149 53.274 -38.486 115.938 1.00 98.17 ATOM 149 CD2 LEU D 149 55.577 -37.952 115.133 1.00 99.27 ATOM 150 N GLU D 150 55.980 -35.311 119.073 1.00108.43 ATOM 151 CA GLU D 150 57.158 -35.377 119.945 1.00113.67 ATOM 152 C GLU D 150 56.770 -35.584 121.410 1.00108.71 ATOM 153 O GLU D 150 57.291 -36.481 122.073 1.00105.48 ATOM 154 CB GLU D 150 58.010 -34.101 119.790 1.00121.16 ATOM 155 CG GLU D 150 59.311 -34.046 120.598 1.00125.63 ATOM 156 CD GLU D 150 60.462 -34.835 119.974 1.00128.18 ATOM 157 OE1 GLU D 150 60.326 -36.061 119.763 1.00127.64 ATOM 158 OE2 GLU D 150 61.523 -34.227 119.711 1.00128.64 ATOM 159 N LYS D 151 55.856 -34.751 121.900 1.00106.14 ATOM 160 CA LYS D 151 55.366 -34.855 123.284 1.00107.60 ATOM 161 C LYS D 151 54.709 -36.217 123.555 1.00105.17 ATOM 162 O LYS D 151 54.917 -36.797 124.622 1.00108.63 ATOM 163 CB LYS D 151 54.437 -33.662 123.632 1.00112.62 ATOM 164 CG LYS D 151 53.221 -33.934 124.520 1.00118.07 ATOM 165 CD LYS D 151 53.565 -34.210 125.978 1.00123.18 ATOM 166 CE LYS D 151 52.420 -34.940 126.673 1.00128.66 ATOM 167 NZ LYS D 151 52.690 -35.228 128.109 1.00131.24 ATOM 168 N HIS D 152 53.937 -36.726 122.593 1.00100.60 ATOM 169 CA HIS D 152 53.277 -38.031 122.746 1.00 96.29 ATOM 170 C HIS D 152 54.264 -39.204 122.759 1.00 92.14 ATOM 171 O HIS D 152 54.074 -40.140 123.531 1.00 90.29 ATOM 172 CB HIS D 152 52.207 -38.254 121.671 1.00 95.37 ATOM 173 CG HIS D 152 51.553 -39.600 121.743 1.00 92.67 ATOM 174 ND1 HIS D 152 50.561 -39.899 122.651 1.00 91.68 ATOM 175 CD2 HIS D 152 51.766 -40.731 121.029 1.00 90.98 ATOM 176 CE1 HIS D 152 50.182 -41.154 122.486 1.00 91.94 ATOM 177 NE2 HIS D 152 50.897 -41.685 121.510 1.00 91.19 ATOM 178 N LEU D 153 55.305 -39.157 121.925 1.00 90.50 ATOM 179 CA LEU D 153 56.341 -40.215 121.929 1.00 92.61 ATOM 180 C LEU D 153 57.097 -40.361 123.264 1.00 95.72 ATOM 181 O LEU D 153 57.637 -41.433 123.551 1.00 94.67 ATOM 182 CB LEU D 153 57.351 -40.055 120.773 1.00 92.68 ATOM 183 CG LEU D 153 57.114 -40.937 119.538 1.00 92.26 ATOM 184 CD1 LEU D 153 56.020 -40.343 118.666 1.00 92.60 ATOM 185 CD2 LEU D 153 58.395 -41.114 118.730 1.00 92.35 ATOM 186 N SER D 154 57.146 -39.295 124.063 1.00101.73 ATOM 187 CA SER D 154 57.685 -39.375 125.424 1.00107.57 ATOM 188 C SER D 154 56.880 -40.347 126.291 1.00111.29 ATOM 189 O SER D 154 57.459 -41.174 126.993 1.00112.42 ATOM 190 CB SER D 154 57.698 -37.995 126.086 1.00109.90 ATOM 191 OG SER D 154 58.333 -37.036 125.258 1.00113.90 ATOM 192 N GLN D 155 55.551 -40.248 126.213 1.00115.53 ATOM 193 CA GLN D 155 54.633 -41.053 127.037 1.00117.31 ATOM 194 C GLN D 155 53.710 -41.984 126.221 1.00114.46 ATOM 195 O GLN D 155 52.571 -42.247 126.633 1.00110.02 ATOM 196 CB GLN D 155 53.793 -40.127 127.935 1.00120.73 ATOM 197 CG GLN D 155 52.933 -39.114 127.180 1.00124.55 ATOM 198 CD GLN D 155 51.627 -38.787 127.884 1.00129.57 ATOM 199 OE1 GLN D 155 51.539 -38.822 129.113 1.00135.85 ATOM 200 NE2 GLN D 155 50.603 -38.457 127.103 1.00133.05 ATOM 201 N CYS D 156 54.194 -42.487 125.078 1.00113.18 ATOM 202 CA CYS D 156 53.414 -43.452 124.270 1.00112.42 ATOM 203 C CYS D 156 53.194 -44.687 125.119 1.00110.83 ATOM 204 O CYS D 156 54.126 -45.186 125.750 1.00107.71 ATOM 205 CB CYS D 156 54.105 -43.850 122.942 1.00110.19 ATOM 206 SG CYS D 156 53.300 -43.356 121.378 1.00105.88 ATOM 207 N ARG D 157 51.957 -45.161 125.137 1.00114.11 ATOM 208 CA ARG D 157 51.605 -46.339 125.912 1.00118.96 ATOM 209 C ARG D 157 52.398 -47.560 125.413 1.00118.18 ATOM 210 O ARG D 157 52.924 -48.331 126.217 1.00117.50 ATOM 211 CB ARG D 157 50.083 -46.579 125.846 1.00123.98 ATOM 212 CG ARG D 157 49.497 -47.509 126.905 1.00127.35 ATOM 213 CD ARG D 157 49.607 -46.941 128.315 1.00130.82 ATOM 214 NE ARG D 157 50.950 -47.109 128.878 1.00134.44 ATOM 215 CZ ARG D 157 51.377 -46.584 130.028 1.00134.67 ATOM 216 NH1 ARG D 157 50.574 -45.841 130.793 1.00133.65 ATOM 217 NH2 ARG D 157 52.630 -46.812 130.422 1.00134.75 ATOM 218 ZN ZN D 303 51.016 -43.812 121.220 1.00 84.52 TER