HEADER DNA BINDING PROTEIN/DNA 31-DEC-69 5YEF TITLE Crystal structure of CTCF ZFs2-8-Hs5-1aE COMPND MOL_ID: 1; COMPND 2 MOLECULE: Transcriptional repressor CTCF; COMPND 3 CHAIN: A, B, G, J; COMPND 4 FRAGMENT: UNP residues ; COMPND 5 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.81 ANGSTORMS DBREF 5YEF B 292 490 UNP P49711 CTCF_HUMAN 292 490 SEQRES 1 B 28 HIS GLU LYS PRO PHE LYS CYS SER MET CYS ASP TYR ALA SEQRES 2 B 28 SER VAL GLU VAL SER LYS LEU LYS ARG HIS ILE ARG SER SEQRES 3 B 28 HIS THR ATOM 1 N HIS B 347 -69.107 -9.798 99.045 1.00106.06 ATOM 2 CA HIS B 347 -68.774 -9.492 97.655 1.00 99.34 ATOM 3 C HIS B 347 -67.500 -8.652 97.553 1.00106.55 ATOM 4 O HIS B 347 -67.454 -7.639 96.860 1.00122.74 ATOM 5 CB HIS B 347 -69.945 -8.797 96.944 1.00100.17 ATOM 6 CG HIS B 347 -71.265 -9.479 97.139 1.00109.18 ATOM 7 ND1 HIS B 347 -71.497 -10.777 96.738 1.00125.50 ATOM 8 CD2 HIS B 347 -72.433 -9.037 97.659 1.00 98.35 ATOM 9 CE1 HIS B 347 -72.740 -11.115 97.028 1.00123.22 ATOM 10 NE2 HIS B 347 -73.331 -10.076 97.586 1.00110.50 ATOM 11 N GLU B 348 -66.433 -9.145 98.178 1.00 95.17 ATOM 12 CA GLU B 348 -65.144 -8.466 98.233 1.00 94.67 ATOM 13 C GLU B 348 -64.159 -9.255 97.376 1.00 98.85 ATOM 14 O GLU B 348 -63.731 -10.348 97.758 1.00109.67 ATOM 15 CB GLU B 348 -64.643 -8.347 99.671 1.00 96.97 ATOM 16 N LYS B 349 -63.785 -8.699 96.233 1.00 92.59 ATOM 17 CA LYS B 349 -62.900 -9.375 95.289 1.00 96.69 ATOM 18 C LYS B 349 -61.531 -8.723 95.266 1.00 95.22 ATOM 19 O LYS B 349 -61.315 -7.763 94.504 1.00101.66 ATOM 20 CB LYS B 349 -63.529 -9.372 93.897 1.00 98.85 ATOM 21 N PRO B 350 -60.572 -9.190 96.078 1.00 92.62 ATOM 22 CA PRO B 350 -59.262 -8.499 96.111 1.00 94.43 ATOM 23 C PRO B 350 -58.453 -8.565 94.823 1.00 90.85 ATOM 24 O PRO B 350 -57.829 -7.555 94.460 1.00 96.08 ATOM 25 CB PRO B 350 -58.536 -9.202 97.274 1.00 93.73 ATOM 26 CG PRO B 350 -59.182 -10.549 97.363 1.00 83.66 ATOM 27 CD PRO B 350 -60.648 -10.209 97.144 1.00 87.99 ATOM 28 N PHE B 351 -58.421 -9.691 94.110 1.00113.73 ATOM 29 CA PHE B 351 -57.490 -9.815 92.991 1.00116.50 ATOM 30 C PHE B 351 -58.080 -9.184 91.736 1.00106.82 ATOM 31 O PHE B 351 -59.156 -9.579 91.287 1.00104.24 ATOM 32 CB PHE B 351 -57.185 -11.286 92.715 1.00118.22 ATOM 33 CG PHE B 351 -56.973 -12.126 93.945 1.00122.96 ATOM 34 CD1 PHE B 351 -55.689 -12.491 94.324 1.00126.52 ATOM 35 CD2 PHE B 351 -58.045 -12.555 94.719 1.00123.15 ATOM 36 CE1 PHE B 351 -55.475 -13.268 95.445 1.00125.97 ATOM 37 CE2 PHE B 351 -57.838 -13.337 95.837 1.00125.27 ATOM 38 CZ PHE B 351 -56.548 -13.693 96.200 1.00124.08 ATOM 39 N LYS B 352 -57.340 -8.252 91.133 1.00106.35 ATOM 40 CA LYS B 352 -57.795 -7.472 89.984 1.00 99.12 ATOM 41 C LYS B 352 -56.950 -7.819 88.760 1.00100.66 ATOM 42 O LYS B 352 -55.804 -8.274 88.876 1.00100.63 ATOM 43 CB LYS B 352 -57.735 -5.957 90.260 1.00 97.76 ATOM 44 N CYS B 353 -57.510 -7.573 87.576 1.00106.01 ATOM 45 CA CYS B 353 -56.886 -8.080 86.362 1.00112.47 ATOM 46 C CYS B 353 -55.866 -7.093 85.781 1.00114.82 ATOM 47 O CYS B 353 -55.737 -5.947 86.218 1.00114.13 ATOM 48 CB CYS B 353 -57.967 -8.417 85.330 1.00115.76 ATOM 49 SG CYS B 353 -57.388 -9.523 84.059 1.00120.54 ATOM 50 N SER B 354 -55.168 -7.552 84.739 1.00135.42 ATOM 51 CA SER B 354 -54.071 -6.803 84.122 1.00141.12 ATOM 52 C SER B 354 -54.530 -5.984 82.921 1.00149.04 ATOM 53 O SER B 354 -54.288 -4.772 82.865 1.00148.75 ATOM 54 CB SER B 354 -52.950 -7.773 83.697 1.00139.13 ATOM 55 OG SER B 354 -53.308 -8.512 82.528 1.00136.77 ATOM 56 N MET B 355 -55.183 -6.639 81.952 1.00137.11 ATOM 57 CA MET B 355 -55.597 -6.020 80.702 1.00136.00 ATOM 58 C MET B 355 -57.058 -5.575 80.711 1.00133.66 ATOM 59 O MET B 355 -57.437 -4.738 79.889 1.00138.20 ATOM 60 CB MET B 355 -55.348 -6.991 79.522 1.00136.44 ATOM 61 N CYS B 356 -57.888 -6.123 81.599 1.00118.02 ATOM 62 CA CYS B 356 -59.288 -5.731 81.716 1.00115.65 ATOM 63 C CYS B 356 -59.628 -5.365 83.158 1.00112.21 ATOM 64 O CYS B 356 -58.826 -5.520 84.090 1.00109.80 ATOM 65 CB CYS B 356 -60.251 -6.817 81.188 1.00114.03 ATOM 66 SG CYS B 356 -59.985 -8.507 81.821 1.00111.77 ATOM 67 N ASP B 357 -60.850 -4.856 83.297 1.00113.76 ATOM 68 CA ASP B 357 -61.447 -4.460 84.571 1.00104.70 ATOM 69 C ASP B 357 -62.128 -5.649 85.268 1.00 98.62 ATOM 70 O ASP B 357 -63.300 -5.567 85.640 1.00 99.58 ATOM 71 CB ASP B 357 -62.430 -3.318 84.342 1.00100.65 ATOM 72 N TYR B 358 -61.445 -6.809 85.296 1.00 87.21 ATOM 73 CA TYR B 358 -61.945 -8.038 85.933 1.00 82.72 ATOM 74 C TYR B 358 -61.356 -8.226 87.337 1.00 86.19 ATOM 75 O TYR B 358 -60.191 -7.887 87.572 1.00 88.51 ATOM 76 CB TYR B 358 -61.619 -9.278 85.093 1.00 78.40 ATOM 77 CG TYR B 358 -61.960 -10.599 85.774 1.00 76.32 ATOM 78 CD1 TYR B 358 -60.968 -11.446 86.258 1.00 74.63 ATOM 79 CD2 TYR B 358 -63.278 -10.995 85.928 1.00 77.33 ATOM 80 CE1 TYR B 358 -61.285 -12.642 86.868 1.00 74.84 ATOM 81 CE2 TYR B 358 -63.604 -12.196 86.534 1.00 76.72 ATOM 82 CZ TYR B 358 -62.610 -13.013 87.002 1.00 77.01 ATOM 83 OH TYR B 358 -62.984 -14.200 87.610 1.00 79.99 ATOM 84 N ALA B 359 -62.136 -8.817 88.254 1.00 91.05 ATOM 85 CA ALA B 359 -61.642 -9.124 89.596 1.00 93.35 ATOM 86 C ALA B 359 -62.499 -10.205 90.238 1.00 92.90 ATOM 87 O ALA B 359 -63.701 -10.278 89.992 1.00 95.78 ATOM 88 CB ALA B 359 -61.625 -7.880 90.500 1.00 96.65 ATOM 89 N SER B 360 -61.885 -11.029 91.089 1.00108.74 ATOM 90 CA SER B 360 -62.641 -12.110 91.721 1.00115.35 ATOM 91 C SER B 360 -62.138 -12.415 93.124 1.00119.13 ATOM 92 O SER B 360 -61.076 -11.962 93.557 1.00122.71 ATOM 93 CB SER B 360 -62.597 -13.402 90.898 1.00119.43 ATOM 94 OG SER B 360 -63.439 -14.400 91.463 1.00120.10 ATOM 95 N VAL B 361 -62.937 -13.231 93.814 1.00 91.19 ATOM 96 CA VAL B 361 -62.718 -13.574 95.214 1.00 94.20 ATOM 97 C VAL B 361 -61.514 -14.480 95.379 1.00 97.54 ATOM 98 O VAL B 361 -60.804 -14.414 96.396 1.00 97.97 ATOM 99 CB VAL B 361 -63.993 -14.230 95.748 1.00 95.97 ATOM 100 CG1 VAL B 361 -63.734 -14.878 97.075 1.00116.13 ATOM 101 CG2 VAL B 361 -65.068 -13.179 95.885 1.00 89.80 ATOM 102 N GLU B 362 -61.242 -15.308 94.380 1.00110.25 ATOM 103 CA GLU B 362 -60.214 -16.331 94.425 1.00111.27 ATOM 104 C GLU B 362 -59.163 -16.048 93.368 1.00115.12 ATOM 105 O GLU B 362 -59.490 -15.637 92.250 1.00115.34 ATOM 106 CB GLU B 362 -60.836 -17.692 94.140 1.00102.76 ATOM 107 CG GLU B 362 -60.494 -18.789 95.094 1.00105.92 ATOM 108 CD GLU B 362 -61.541 -19.894 95.065 1.00105.50 ATOM 109 OE1 GLU B 362 -62.372 -19.913 94.122 1.00102.22 ATOM 110 OE2 GLU B 362 -61.537 -20.735 95.999 1.00108.88 ATOM 111 N VAL B 363 -57.896 -16.278 93.724 1.00112.32 ATOM 112 CA VAL B 363 -56.814 -16.130 92.753 1.00111.19 ATOM 113 C VAL B 363 -56.882 -17.252 91.717 1.00110.48 ATOM 114 O VAL B 363 -56.466 -17.073 90.563 1.00109.96 ATOM 115 CB VAL B 363 -55.448 -16.063 93.461 1.00112.23 ATOM 116 CG1 VAL B 363 -55.098 -17.389 94.127 1.00112.60 ATOM 117 CG2 VAL B 363 -54.349 -15.616 92.489 1.00114.06 ATOM 118 N SER B 364 -57.356 -18.433 92.123 1.00110.47 ATOM 119 CA SER B 364 -57.597 -19.503 91.166 1.00102.18 ATOM 120 C SER B 364 -58.400 -18.984 89.980 1.00 98.43 ATOM 121 O SER B 364 -58.046 -19.233 88.821 1.00 97.48 ATOM 122 CB SER B 364 -58.342 -20.647 91.852 1.00 99.73 ATOM 123 OG SER B 364 -58.199 -20.582 93.267 1.00105.35 ATOM 124 N LYS B 365 -59.449 -18.200 90.257 1.00 86.06 ATOM 125 CA LYS B 365 -60.295 -17.671 89.197 1.00 85.80 ATOM 126 C LYS B 365 -59.489 -16.782 88.259 1.00 89.27 ATOM 127 O LYS B 365 -59.661 -16.836 87.034 1.00 94.17 ATOM 128 CB LYS B 365 -61.447 -16.879 89.800 1.00 83.48 ATOM 129 CG LYS B 365 -62.448 -17.750 90.513 1.00 78.98 ATOM 130 CD LYS B 365 -62.601 -19.077 89.846 1.00 74.88 ATOM 131 CE LYS B 365 -63.740 -19.837 90.479 1.00 77.66 ATOM 132 NZ LYS B 365 -63.336 -21.217 90.893 1.00 82.28 ATOM 133 N LEU B 366 -58.569 -15.987 88.808 1.00 75.16 ATOM 134 CA LEU B 366 -57.802 -15.040 87.997 1.00 75.99 ATOM 135 C LEU B 366 -56.718 -15.729 87.169 1.00 82.30 ATOM 136 O LEU B 366 -56.522 -15.396 85.992 1.00 87.85 ATOM 137 CB LEU B 366 -57.219 -13.965 88.914 1.00 73.69 ATOM 138 CG LEU B 366 -56.387 -12.845 88.288 1.00 74.31 ATOM 139 CD1 LEU B 366 -56.572 -11.516 89.008 1.00 73.54 ATOM 140 CD2 LEU B 366 -54.949 -13.288 88.448 1.00 77.51 ATOM 141 N LYS B 367 -55.962 -16.641 87.783 1.00 84.01 ATOM 142 CA LYS B 367 -55.061 -17.489 87.014 1.00 84.11 ATOM 143 C LYS B 367 -55.806 -18.124 85.849 1.00 83.61 ATOM 144 O LYS B 367 -55.331 -18.103 84.707 1.00 81.98 ATOM 145 CB LYS B 367 -54.426 -18.551 87.914 1.00 84.40 ATOM 146 N ARG B 368 -57.007 -18.654 86.117 1.00 81.29 ATOM 147 CA ARG B 368 -57.816 -19.234 85.049 1.00 77.98 ATOM 148 C ARG B 368 -58.232 -18.181 84.015 1.00 76.06 ATOM 149 O ARG B 368 -58.314 -18.471 82.815 1.00 78.69 ATOM 150 CB ARG B 368 -59.035 -19.933 85.663 1.00 75.72 ATOM 151 CG ARG B 368 -59.823 -20.763 84.678 1.00 72.33 ATOM 152 CD ARG B 368 -61.225 -20.287 84.519 1.00 76.44 ATOM 153 NE ARG B 368 -62.141 -20.932 85.448 1.00 73.09 ATOM 154 CZ ARG B 368 -63.193 -20.330 85.997 1.00 72.26 ATOM 155 NH1 ARG B 368 -63.454 -19.052 85.726 1.00 71.48 ATOM 156 NH2 ARG B 368 -63.981 -21.004 86.821 1.00 63.21 ATOM 157 N HIS B 369 -58.483 -16.957 84.461 1.00 73.94 ATOM 158 CA HIS B 369 -58.966 -15.910 83.569 1.00 74.29 ATOM 159 C HIS B 369 -57.892 -15.509 82.569 1.00 81.20 ATOM 160 O HIS B 369 -58.166 -15.334 81.378 1.00 73.77 ATOM 161 CB HIS B 369 -59.409 -14.731 84.434 1.00 71.32 ATOM 162 CG HIS B 369 -59.607 -13.445 83.699 1.00 71.33 ATOM 163 ND1 HIS B 369 -60.718 -13.184 82.925 1.00 67.62 ATOM 164 CD2 HIS B 369 -58.839 -12.331 83.645 1.00 75.59 ATOM 165 CE1 HIS B 369 -60.626 -11.963 82.426 1.00 73.99 ATOM 166 NE2 HIS B 369 -59.490 -11.426 82.842 1.00 76.87 ATOM 167 N ILE B 370 -56.649 -15.427 83.042 1.00 84.30 ATOM 168 CA ILE B 370 -55.558 -14.828 82.282 1.00 88.46 ATOM 169 C ILE B 370 -55.298 -15.561 80.973 1.00 85.79 ATOM 170 O ILE B 370 -54.862 -14.951 79.986 1.00 90.81 ATOM 171 CB ILE B 370 -54.314 -14.771 83.188 1.00 93.62 ATOM 172 CG1 ILE B 370 -54.154 -13.358 83.728 1.00 97.80 ATOM 173 CG2 ILE B 370 -53.042 -15.217 82.482 1.00 96.01 ATOM 174 CD1 ILE B 370 -54.203 -13.296 85.194 1.00 99.36 ATOM 175 N ARG B 371 -55.567 -16.863 80.925 1.00 82.05 ATOM 176 CA ARG B 371 -55.377 -17.588 79.672 1.00 82.42 ATOM 177 C ARG B 371 -56.251 -17.045 78.543 1.00 84.42 ATOM 178 O ARG B 371 -55.935 -17.279 77.369 1.00 86.16 ATOM 179 CB ARG B 371 -55.630 -19.081 79.867 1.00 79.42 ATOM 180 CG ARG B 371 -54.836 -19.729 81.006 1.00 83.96 ATOM 181 CD ARG B 371 -55.718 -19.824 82.218 1.00 80.54 ATOM 182 NE ARG B 371 -55.278 -20.677 83.324 1.00 81.01 ATOM 183 CZ ARG B 371 -55.395 -21.999 83.328 1.00 79.93 ATOM 184 NH1 ARG B 371 -55.902 -22.613 82.272 1.00 78.75 ATOM 185 NH2 ARG B 371 -55.013 -22.703 84.382 1.00 82.28 ATOM 186 N SER B 372 -57.331 -16.315 78.865 1.00 93.47 ATOM 187 CA SER B 372 -58.132 -15.681 77.817 1.00 94.14 ATOM 188 C SER B 372 -57.377 -14.554 77.126 1.00100.03 ATOM 189 O SER B 372 -57.626 -14.278 75.944 1.00103.73 ATOM 190 CB SER B 372 -59.442 -15.161 78.399 1.00 95.92 ATOM 191 OG SER B 372 -60.179 -16.239 78.957 1.00 92.36 ATOM 192 N HIS B 373 -56.464 -13.892 77.842 1.00 97.80 ATOM 193 CA HIS B 373 -55.577 -12.922 77.206 1.00104.91 ATOM 194 C HIS B 373 -54.392 -13.640 76.543 1.00109.23 ATOM 195 O HIS B 373 -54.151 -13.487 75.337 1.00103.79 ATOM 196 CB HIS B 373 -55.093 -11.876 78.232 1.00103.64 ATOM 197 CG HIS B 373 -56.194 -11.141 78.954 1.00 97.73 ATOM 198 ND1 HIS B 373 -57.256 -10.540 78.305 1.00 93.68 ATOM 199 CD2 HIS B 373 -56.379 -10.893 80.276 1.00 96.50 ATOM 200 CE1 HIS B 373 -58.054 -9.974 79.197 1.00 92.12 ATOM 201 NE2 HIS B 373 -57.547 -10.177 80.400 1.00 94.41 ATOM 202 N THR B 374 -53.651 -14.437 77.330 1.00 59.68 ATOM 203 CA THR B 374 -52.436 -15.108 76.847 1.00 63.26 ATOM 204 C THR B 374 -52.713 -16.051 75.674 1.00 75.36 ATOM 205 O THR B 374 -52.102 -15.931 74.604 1.00 74.88 ATOM 206 CB THR B 374 -51.750 -15.866 78.004 1.00 61.34 ATOM 207 OG1 THR B 374 -52.343 -17.159 78.193 1.00 59.91 ATOM 208 CG2 THR B 374 -51.872 -15.093 79.317 1.00 62.19 ATOM 209 ZN ZN B 502 -58.314 -9.812 82.250 1.00163.19 TER