HEADER DNA BINDING PROTEIN/DNA 31-DEC-69 5YEF TITLE Crystal structure of CTCF ZFs2-8-Hs5-1aE COMPND MOL_ID: 1; COMPND 2 MOLECULE: Transcriptional repressor CTCF; COMPND 3 CHAIN: A, B, G, J; COMPND 4 FRAGMENT: UNP residues ; COMPND 5 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.81 ANGSTORMS DBREF 5YEF B 292 490 UNP P49711 CTCF_HUMAN 292 490 SEQRES 1 J 28 HIS GLU LYS PRO PHE LYS CYS SER MET CYS ASP TYR ALA SEQRES 2 J 28 SER VAL GLU VAL SER LYS LEU LYS ARG HIS ILE ARG SER SEQRES 3 J 28 HIS THR ATOM 1 N HIS J 347 -69.019 0.039 57.869 1.00110.56 ATOM 2 CA HIS J 347 -68.372 0.142 59.167 1.00109.98 ATOM 3 C HIS J 347 -67.006 -0.531 59.174 1.00109.20 ATOM 4 O HIS J 347 -66.801 -1.540 59.849 1.00125.65 ATOM 5 CB HIS J 347 -69.326 -0.440 60.190 1.00115.04 ATOM 6 CG HIS J 347 -70.733 0.017 59.981 1.00120.92 ATOM 7 ND1 HIS J 347 -71.465 -0.333 58.869 1.00132.04 ATOM 8 CD2 HIS J 347 -71.519 0.854 60.691 1.00112.94 ATOM 9 CE1 HIS J 347 -72.652 0.239 58.915 1.00130.97 ATOM 10 NE2 HIS J 347 -72.712 0.965 60.014 1.00120.51 ATOM 11 N GLU J 348 -66.045 0.063 58.463 1.00 88.22 ATOM 12 CA GLU J 348 -64.734 -0.564 58.284 1.00 89.79 ATOM 13 C GLU J 348 -63.911 -0.530 59.568 1.00101.68 ATOM 14 O GLU J 348 -63.421 -1.571 60.015 1.00111.75 ATOM 15 CB GLU J 348 -63.974 0.116 57.142 1.00 90.38 ATOM 16 N LYS J 349 -63.711 0.651 60.148 1.00102.46 ATOM 17 CA LYS J 349 -62.991 0.804 61.409 1.00107.66 ATOM 18 C LYS J 349 -61.684 0.010 61.416 1.00111.14 ATOM 19 O LYS J 349 -61.549 -0.981 62.151 1.00118.33 ATOM 20 CB LYS J 349 -63.878 0.396 62.580 1.00106.97 ATOM 21 N PRO J 350 -60.700 0.399 60.596 1.00106.17 ATOM 22 CA PRO J 350 -59.450 -0.395 60.528 1.00101.26 ATOM 23 C PRO J 350 -58.564 -0.375 61.772 1.00100.40 ATOM 24 O PRO J 350 -57.909 -1.393 62.043 1.00108.46 ATOM 25 CB PRO J 350 -58.742 0.193 59.299 1.00 87.04 ATOM 26 CG PRO J 350 -59.302 1.563 59.171 1.00 87.00 ATOM 27 CD PRO J 350 -60.756 1.350 59.471 1.00 99.00 ATOM 28 N PHE J 351 -58.459 0.738 62.501 1.00130.29 ATOM 29 CA PHE J 351 -57.472 0.874 63.572 1.00132.19 ATOM 30 C PHE J 351 -57.990 0.296 64.893 1.00124.80 ATOM 31 O PHE J 351 -59.038 0.712 65.382 1.00124.13 ATOM 32 CB PHE J 351 -57.138 2.348 63.768 1.00131.05 ATOM 33 CG PHE J 351 -56.991 3.129 62.496 1.00132.25 ATOM 34 CD1 PHE J 351 -55.735 3.466 62.026 1.00136.79 ATOM 35 CD2 PHE J 351 -58.100 3.526 61.768 1.00130.45 ATOM 36 CE1 PHE J 351 -55.590 4.184 60.857 1.00134.65 ATOM 37 CE2 PHE J 351 -57.956 4.245 60.597 1.00133.65 ATOM 38 CZ PHE J 351 -56.701 4.573 60.142 1.00134.01 ATOM 39 N LYS J 352 -57.220 -0.615 65.496 1.00125.46 ATOM 40 CA LYS J 352 -57.628 -1.378 66.674 1.00114.93 ATOM 41 C LYS J 352 -56.740 -1.060 67.880 1.00113.77 ATOM 42 O LYS J 352 -55.606 -0.598 67.738 1.00113.01 ATOM 43 CB LYS J 352 -57.615 -2.885 66.377 1.00108.83 ATOM 44 N CYS J 353 -57.274 -1.306 69.083 1.00101.69 ATOM 45 CA CYS J 353 -56.624 -0.881 70.315 1.00106.54 ATOM 46 C CYS J 353 -55.703 -1.960 70.914 1.00106.69 ATOM 47 O CYS J 353 -55.624 -3.096 70.435 1.00104.14 ATOM 48 CB CYS J 353 -57.686 -0.437 71.320 1.00105.52 ATOM 49 SG CYS J 353 -57.038 0.579 72.628 1.00104.42 ATOM 50 N SER J 354 -55.022 -1.593 72.011 1.00143.92 ATOM 51 CA SER J 354 -54.037 -2.422 72.711 1.00146.75 ATOM 52 C SER J 354 -54.611 -3.175 73.911 1.00154.30 ATOM 53 O SER J 354 -54.492 -4.404 73.971 1.00150.89 ATOM 54 CB SER J 354 -52.844 -1.558 73.177 1.00143.44 ATOM 55 OG SER J 354 -53.165 -0.736 74.301 1.00141.39 ATOM 56 N MET J 355 -55.263 -2.464 74.854 1.00146.48 ATOM 57 CA MET J 355 -55.722 -3.044 76.114 1.00146.46 ATOM 58 C MET J 355 -57.189 -3.483 76.092 1.00144.92 ATOM 59 O MET J 355 -57.579 -4.315 76.922 1.00146.96 ATOM 60 CB MET J 355 -55.497 -2.041 77.272 1.00146.86 ATOM 61 N CYS J 356 -58.016 -2.945 75.192 1.00135.16 ATOM 62 CA CYS J 356 -59.407 -3.375 75.050 1.00134.16 ATOM 63 C CYS J 356 -59.672 -3.708 73.581 1.00132.15 ATOM 64 O CYS J 356 -58.822 -3.509 72.703 1.00131.33 ATOM 65 CB CYS J 356 -60.389 -2.318 75.583 1.00135.27 ATOM 66 SG CYS J 356 -60.085 -0.654 74.995 1.00136.50 ATOM 67 N ASP J 357 -60.856 -4.260 73.330 1.00126.77 ATOM 68 CA ASP J 357 -61.241 -4.646 71.985 1.00115.51 ATOM 69 C ASP J 357 -61.849 -3.480 71.210 1.00109.72 ATOM 70 O ASP J 357 -62.775 -3.701 70.421 1.00103.70 ATOM 71 CB ASP J 357 -62.219 -5.828 72.041 1.00110.18 ATOM 72 N TYR J 358 -61.328 -2.260 71.384 1.00 93.78 ATOM 73 CA TYR J 358 -61.887 -1.081 70.725 1.00 92.92 ATOM 74 C TYR J 358 -61.200 -0.820 69.385 1.00 94.34 ATOM 75 O TYR J 358 -60.007 -1.081 69.213 1.00 95.75 ATOM 76 CB TYR J 358 -61.763 0.163 71.602 1.00 94.35 ATOM 77 CG TYR J 358 -62.141 1.458 70.894 1.00 96.92 ATOM 78 CD1 TYR J 358 -61.244 2.508 70.811 1.00 93.67 ATOM 79 CD2 TYR J 358 -63.384 1.621 70.295 1.00 99.48 ATOM 80 CE1 TYR J 358 -61.567 3.682 70.169 1.00 93.68 ATOM 81 CE2 TYR J 358 -63.717 2.800 69.641 1.00101.47 ATOM 82 CZ TYR J 358 -62.800 3.827 69.585 1.00101.39 ATOM 83 OH TYR J 358 -63.103 5.008 68.948 1.00105.80 ATOM 84 N ALA J 359 -61.969 -0.272 68.441 1.00 99.82 ATOM 85 CA ALA J 359 -61.475 0.065 67.112 1.00100.44 ATOM 86 C ALA J 359 -62.385 1.126 66.513 1.00 99.16 ATOM 87 O ALA J 359 -63.580 1.156 66.801 1.00101.43 ATOM 88 CB ALA J 359 -61.416 -1.173 66.207 1.00100.78 ATOM 89 N SER J 360 -61.812 1.997 65.679 1.00 99.35 ATOM 90 CA SER J 360 -62.570 3.093 65.086 1.00102.77 ATOM 91 C SER J 360 -62.036 3.444 63.704 1.00104.26 ATOM 92 O SER J 360 -61.040 2.889 63.236 1.00110.14 ATOM 93 CB SER J 360 -62.537 4.347 65.949 1.00108.25 ATOM 94 OG SER J 360 -62.224 5.460 65.129 1.00111.12 ATOM 95 N VAL J 361 -62.748 4.375 63.053 1.00100.16 ATOM 96 CA VAL J 361 -62.516 4.707 61.646 1.00102.42 ATOM 97 C VAL J 361 -61.257 5.560 61.436 1.00105.53 ATOM 98 O VAL J 361 -60.580 5.433 60.402 1.00106.21 ATOM 99 CB VAL J 361 -63.766 5.392 61.076 1.00 99.74 ATOM 100 CG1 VAL J 361 -63.488 5.905 59.696 1.00100.45 ATOM 101 CG2 VAL J 361 -64.907 4.409 61.045 1.00 99.94 ATOM 102 N GLU J 362 -60.926 6.452 62.381 1.00129.38 ATOM 103 CA GLU J 362 -59.796 7.375 62.247 1.00129.37 ATOM 104 C GLU J 362 -58.805 7.212 63.394 1.00132.30 ATOM 105 O GLU J 362 -59.191 6.939 64.536 1.00136.10 ATOM 106 CB GLU J 362 -60.239 8.845 62.217 1.00113.36 ATOM 107 CG GLU J 362 -61.674 9.097 61.852 1.00111.79 ATOM 108 CD GLU J 362 -62.217 10.321 62.556 1.00109.92 ATOM 109 OE1 GLU J 362 -62.014 10.428 63.784 1.00108.30 ATOM 110 OE2 GLU J 362 -62.869 11.172 61.909 1.00110.37 ATOM 111 N VAL J 363 -57.523 7.440 63.085 1.00126.07 ATOM 112 CA VAL J 363 -56.471 7.358 64.099 1.00122.47 ATOM 113 C VAL J 363 -56.658 8.439 65.156 1.00118.29 ATOM 114 O VAL J 363 -56.268 8.257 66.316 1.00117.66 ATOM 115 CB VAL J 363 -55.073 7.463 63.451 1.00120.45 ATOM 116 CG1 VAL J 363 -54.120 6.394 64.011 1.00121.02 ATOM 117 CG2 VAL J 363 -55.169 7.395 61.924 1.00120.05 ATOM 118 N SER J 364 -57.195 9.597 64.765 1.00111.39 ATOM 119 CA SER J 364 -57.524 10.621 65.748 1.00107.84 ATOM 120 C SER J 364 -58.328 10.030 66.901 1.00107.24 ATOM 121 O SER J 364 -58.019 10.274 68.076 1.00106.36 ATOM 122 CB SER J 364 -58.304 11.748 65.069 1.00108.06 ATOM 123 OG SER J 364 -58.442 11.483 63.673 1.00116.99 ATOM 124 N LYS J 365 -59.328 9.202 66.584 1.00 86.33 ATOM 125 CA LYS J 365 -60.162 8.619 67.622 1.00 86.23 ATOM 126 C LYS J 365 -59.345 7.715 68.535 1.00 89.88 ATOM 127 O LYS J 365 -59.521 7.742 69.757 1.00 92.42 ATOM 128 CB LYS J 365 -61.314 7.836 67.002 1.00 86.94 ATOM 129 CG LYS J 365 -62.351 8.708 66.348 1.00 83.01 ATOM 130 CD LYS J 365 -62.524 9.999 67.076 1.00 78.27 ATOM 131 CE LYS J 365 -63.675 10.764 66.483 1.00 76.48 ATOM 132 NZ LYS J 365 -63.223 12.137 66.118 1.00 73.23 ATOM 133 N LEU J 366 -58.415 6.938 67.972 1.00 80.92 ATOM 134 CA LEU J 366 -57.665 5.979 68.785 1.00 82.23 ATOM 135 C LEU J 366 -56.613 6.680 69.643 1.00 83.92 ATOM 136 O LEU J 366 -56.405 6.317 70.809 1.00 89.49 ATOM 137 CB LEU J 366 -57.008 4.930 67.885 1.00 81.98 ATOM 138 CG LEU J 366 -56.324 3.716 68.543 1.00 84.80 ATOM 139 CD1 LEU J 366 -56.360 2.528 67.588 1.00 87.00 ATOM 140 CD2 LEU J 366 -54.905 3.987 69.028 1.00 84.81 ATOM 141 N LYS J 367 -55.883 7.628 69.048 1.00 88.41 ATOM 142 CA LYS J 367 -55.003 8.497 69.819 1.00 86.15 ATOM 143 C LYS J 367 -55.752 9.099 70.997 1.00 88.12 ATOM 144 O LYS J 367 -55.245 9.113 72.123 1.00 86.61 ATOM 145 CB LYS J 367 -54.409 9.583 68.922 1.00 83.68 ATOM 146 N ARG J 368 -56.975 9.593 70.750 1.00 77.71 ATOM 147 CA ARG J 368 -57.809 10.139 71.821 1.00 75.35 ATOM 148 C ARG J 368 -58.223 9.067 72.835 1.00 79.46 ATOM 149 O ARG J 368 -58.322 9.334 74.039 1.00 82.53 ATOM 150 CB ARG J 368 -59.032 10.818 71.194 1.00 73.24 ATOM 151 CG ARG J 368 -59.909 11.594 72.154 1.00 70.51 ATOM 152 CD ARG J 368 -61.293 11.018 72.152 1.00 77.45 ATOM 153 NE ARG J 368 -62.227 11.775 71.327 1.00 74.13 ATOM 154 CZ ARG J 368 -63.296 11.243 70.738 1.00 74.19 ATOM 155 NH1 ARG J 368 -63.552 9.944 70.866 1.00 74.32 ATOM 156 NH2 ARG J 368 -64.101 12.006 70.011 1.00 66.35 ATOM 157 N HIS J 369 -58.479 7.854 72.367 1.00 80.23 ATOM 158 CA HIS J 369 -58.955 6.800 73.253 1.00 84.86 ATOM 159 C HIS J 369 -57.866 6.378 74.229 1.00 89.91 ATOM 160 O HIS J 369 -58.132 6.170 75.417 1.00 84.98 ATOM 161 CB HIS J 369 -59.450 5.634 72.392 1.00 83.31 ATOM 162 CG HIS J 369 -59.619 4.339 73.119 1.00 84.14 ATOM 163 ND1 HIS J 369 -60.662 4.094 73.987 1.00 87.29 ATOM 164 CD2 HIS J 369 -58.903 3.192 73.062 1.00 88.11 ATOM 165 CE1 HIS J 369 -60.564 2.863 74.457 1.00 88.17 ATOM 166 NE2 HIS J 369 -59.504 2.294 73.912 1.00 90.82 ATOM 167 N ILE J 370 -56.625 6.287 73.744 1.00114.51 ATOM 168 CA ILE J 370 -55.556 5.676 74.526 1.00118.80 ATOM 169 C ILE J 370 -55.288 6.454 75.810 1.00115.47 ATOM 170 O ILE J 370 -54.860 5.870 76.813 1.00120.23 ATOM 171 CB ILE J 370 -54.283 5.520 73.667 1.00121.58 ATOM 172 CG1 ILE J 370 -53.396 4.417 74.236 1.00127.82 ATOM 173 CG2 ILE J 370 -53.493 6.815 73.604 1.00116.39 ATOM 174 CD1 ILE J 370 -53.833 3.016 73.828 1.00128.96 ATOM 175 N ARG J 371 -55.539 7.769 75.817 1.00 94.61 ATOM 176 CA ARG J 371 -55.367 8.538 77.049 1.00 91.59 ATOM 177 C ARG J 371 -56.254 8.019 78.175 1.00 94.00 ATOM 178 O ARG J 371 -56.000 8.334 79.344 1.00 96.47 ATOM 179 CB ARG J 371 -55.652 10.027 76.832 1.00 85.60 ATOM 180 CG ARG J 371 -54.899 10.715 75.704 1.00 83.61 ATOM 181 CD ARG J 371 -55.782 10.807 74.504 1.00 81.39 ATOM 182 NE ARG J 371 -55.340 11.660 73.397 1.00 79.87 ATOM 183 CZ ARG J 371 -55.458 12.981 73.382 1.00 74.58 ATOM 184 NH1 ARG J 371 -55.980 13.602 74.433 1.00 72.53 ATOM 185 NH2 ARG J 371 -55.057 13.674 72.322 1.00 72.99 ATOM 186 N SER J 372 -57.308 7.258 77.855 1.00 90.65 ATOM 187 CA SER J 372 -58.111 6.643 78.908 1.00 93.21 ATOM 188 C SER J 372 -57.361 5.523 79.619 1.00 94.80 ATOM 189 O SER J 372 -57.605 5.282 80.809 1.00 93.26 ATOM 190 CB SER J 372 -59.431 6.132 78.335 1.00 97.64 ATOM 191 OG SER J 372 -60.176 7.200 77.765 1.00 93.85 ATOM 192 N HIS J 373 -56.452 4.831 78.923 1.00103.42 ATOM 193 CA HIS J 373 -55.576 3.861 79.583 1.00107.46 ATOM 194 C HIS J 373 -54.369 4.559 80.222 1.00111.44 ATOM 195 O HIS J 373 -54.113 4.417 81.427 1.00108.83 ATOM 196 CB HIS J 373 -55.100 2.781 78.595 1.00105.81 ATOM 197 CG HIS J 373 -56.200 2.042 77.888 1.00103.61 ATOM 198 ND1 HIS J 373 -57.301 1.531 78.541 1.00102.38 ATOM 199 CD2 HIS J 373 -56.322 1.658 76.593 1.00101.39 ATOM 200 CE1 HIS J 373 -58.082 0.916 77.669 1.00 98.47 ATOM 201 NE2 HIS J 373 -57.508 0.975 76.481 1.00 95.78 ATOM 202 N THR J 374 -53.607 5.304 79.412 1.00 59.84 ATOM 203 CA THR J 374 -52.397 5.975 79.892 1.00 72.27 ATOM 204 C THR J 374 -52.707 6.933 81.043 1.00 80.83 ATOM 205 O THR J 374 -52.149 6.814 82.141 1.00 80.66 ATOM 206 CB THR J 374 -51.721 6.725 78.728 1.00 71.59 ATOM 207 OG1 THR J 374 -52.343 7.993 78.563 1.00 70.40 ATOM 208 CG2 THR J 374 -51.874 5.979 77.414 1.00 68.51 ATOM 209 ZN ZN J 502 -58.382 0.703 74.441 1.00106.71 TER