HEADER DNA BINDING PROTEIN 31-DEC-69 5YEG TITLE Crystal structure of CTCF ZFs4-8-Hs5-1a complex COMPND MOL_ID: 2; COMPND 2 MOLECULE: Transcriptional repressor CTCF; COMPND 3 CHAIN: B; COMPND 4 FRAGMENT: UNP residues ; COMPND 5 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.00 ANGSTORMS DBREF 5YEG B 349 489 UNP P49711 CTCF_HUMAN 349 489 SEQRES 1 B 28 GLY GLU ARG PRO PHE GLN CYS SER LEU CYS SER TYR ALA SEQRES 2 B 28 SER ARG ASP THR TYR LYS LEU LYS ARG HIS MET ARG THR SEQRES 3 B 28 HIS SER ATOM 1 N GLY B 375 20.121 31.734 6.301 1.00 39.14 ATOM 2 CA GLY B 375 20.693 30.682 5.487 1.00 37.05 ATOM 3 C GLY B 375 21.814 29.910 6.150 1.00 36.38 ATOM 4 O GLY B 375 22.491 29.123 5.477 1.00 39.56 ATOM 5 N GLU B 376 22.036 30.109 7.446 1.00 34.77 ATOM 6 CA GLU B 376 23.070 29.370 8.153 1.00 36.19 ATOM 7 C GLU B 376 22.698 27.893 8.201 1.00 36.75 ATOM 8 O GLU B 376 21.623 27.535 8.697 1.00 35.13 ATOM 9 CB GLU B 376 23.243 29.909 9.570 1.00 36.41 ATOM 10 CG GLU B 376 24.384 29.231 10.316 1.00 38.80 ATOM 11 CD GLU B 376 24.379 29.477 11.824 1.00 40.03 ATOM 12 OE1 GLU B 376 23.518 30.231 12.335 1.00 41.09 ATOM 13 OE2 GLU B 376 25.260 28.908 12.500 1.00 46.94 ATOM 14 N ARG B 377 23.592 27.034 7.704 1.00 34.80 ATOM 15 CA ARG B 377 23.392 25.583 7.690 1.00 32.16 ATOM 16 C ARG B 377 24.499 24.923 8.503 1.00 28.96 ATOM 17 O ARG B 377 25.533 24.513 7.950 1.00 30.36 ATOM 18 CB ARG B 377 23.344 25.064 6.255 1.00 29.04 ATOM 19 CG ARG B 377 22.193 25.642 5.428 1.00 26.67 ATOM 20 CD ARG B 377 22.367 25.291 3.958 1.00 26.50 ATOM 21 NE ARG B 377 21.278 25.757 3.111 1.00 27.00 ATOM 22 CZ ARG B 377 20.218 25.027 2.785 1.00 34.14 ATOM 23 NH1 ARG B 377 20.105 23.774 3.231 1.00 30.38 ATOM 24 NH2 ARG B 377 19.278 25.542 2.005 1.00 31.23 ATOM 25 N PRO B 378 24.328 24.800 9.828 1.00 30.55 ATOM 26 CA PRO B 378 25.442 24.350 10.685 1.00 32.63 ATOM 27 C PRO B 378 25.784 22.876 10.561 1.00 32.80 ATOM 28 O PRO B 378 26.878 22.482 10.973 1.00 32.03 ATOM 29 CB PRO B 378 24.950 24.664 12.107 1.00 30.46 ATOM 30 CG PRO B 378 23.778 25.582 11.932 1.00 32.76 ATOM 31 CD PRO B 378 23.164 25.227 10.617 1.00 30.68 ATOM 32 N PHE B 379 24.896 22.044 10.037 1.00 30.26 ATOM 33 CA PHE B 379 25.036 20.596 10.148 1.00 28.70 ATOM 34 C PHE B 379 25.365 20.039 8.765 1.00 29.21 ATOM 35 O PHE B 379 24.476 19.810 7.937 1.00 25.58 ATOM 36 CB PHE B 379 23.779 20.014 10.792 1.00 29.17 ATOM 37 CG PHE B 379 23.472 20.660 12.114 1.00 28.93 ATOM 38 CD1 PHE B 379 24.210 20.334 13.244 1.00 29.57 ATOM 39 CD2 PHE B 379 22.526 21.669 12.204 1.00 28.55 ATOM 40 CE1 PHE B 379 23.975 20.965 14.460 1.00 31.07 ATOM 41 CE2 PHE B 379 22.284 22.303 13.419 1.00 30.99 ATOM 42 CZ PHE B 379 23.020 21.949 14.548 1.00 32.29 ATOM 43 N GLN B 380 26.659 19.843 8.526 1.00 29.02 ATOM 44 CA GLN B 380 27.186 19.501 7.217 1.00 31.32 ATOM 45 C GLN B 380 27.204 17.990 7.030 1.00 28.13 ATOM 46 O GLN B 380 27.600 17.240 7.925 1.00 29.47 ATOM 47 CB GLN B 380 28.603 20.074 7.057 1.00 32.23 ATOM 48 CG GLN B 380 29.333 19.616 5.803 1.00 31.66 ATOM 49 CD GLN B 380 28.741 20.205 4.538 1.00 31.56 ATOM 50 OE1 GLN B 380 28.561 21.420 4.434 1.00 34.60 ATOM 51 NE2 GLN B 380 28.427 19.349 3.568 1.00 29.12 ATOM 52 N CYS B 381 26.764 17.543 5.863 1.00 26.02 ATOM 53 CA CYS B 381 26.867 16.125 5.562 1.00 26.45 ATOM 54 C CYS B 381 28.332 15.760 5.344 1.00 27.85 ATOM 55 O CYS B 381 29.056 16.470 4.640 1.00 28.65 ATOM 56 CB CYS B 381 26.028 15.772 4.333 1.00 23.97 ATOM 57 SG CYS B 381 26.211 14.063 3.871 1.00 21.32 ATOM 58 N SER B 382 28.771 14.643 5.936 1.00 27.40 ATOM 59 CA SER B 382 30.153 14.205 5.751 1.00 29.29 ATOM 60 C SER B 382 30.388 13.547 4.401 1.00 31.24 ATOM 61 O SER B 382 31.546 13.310 4.035 1.00 32.46 ATOM 62 CB SER B 382 30.556 13.224 6.855 1.00 31.40 ATOM 63 OG SER B 382 29.665 12.117 6.894 1.00 35.19 ATOM 64 N LEU B 383 29.327 13.263 3.648 1.00 25.70 ATOM 65 CA LEU B 383 29.450 12.503 2.420 1.00 25.81 ATOM 66 C LEU B 383 29.194 13.316 1.160 1.00 26.84 ATOM 67 O LEU B 383 29.553 12.854 0.072 1.00 27.54 ATOM 68 CB LEU B 383 28.479 11.303 2.439 1.00 24.36 ATOM 69 CG LEU B 383 28.655 10.344 3.622 1.00 24.78 ATOM 70 CD1 LEU B 383 27.781 9.112 3.486 1.00 23.38 ATOM 71 CD2 LEU B 383 30.122 9.945 3.833 1.00 27.82 ATOM 72 N CYS B 384 28.507 14.453 1.255 1.00 25.26 ATOM 73 CA CYS B 384 28.289 15.299 0.082 1.00 26.53 ATOM 74 C CYS B 384 28.252 16.755 0.544 1.00 25.48 ATOM 75 O CYS B 384 28.553 17.059 1.701 1.00 26.72 ATOM 76 CB CYS B 384 27.016 14.871 -0.669 1.00 25.01 ATOM 77 SG CYS B 384 25.460 15.435 0.065 1.00 23.00 ATOM 78 N SER B 385 27.871 17.661 -0.360 1.00 24.76 ATOM 79 CA SER B 385 27.912 19.082 -0.018 1.00 29.08 ATOM 80 C SER B 385 26.662 19.580 0.707 1.00 28.58 ATOM 81 O SER B 385 26.650 20.743 1.145 1.00 28.29 ATOM 82 CB SER B 385 28.139 19.939 -1.268 1.00 26.95 ATOM 83 OG SER B 385 26.995 19.949 -2.099 1.00 27.30 ATOM 84 N TYR B 386 25.623 18.751 0.844 1.00 24.38 ATOM 85 CA TYR B 386 24.414 19.172 1.543 1.00 23.99 ATOM 86 C TYR B 386 24.717 19.555 2.989 1.00 22.67 ATOM 87 O TYR B 386 25.516 18.908 3.664 1.00 23.44 ATOM 88 CB TYR B 386 23.353 18.057 1.521 1.00 23.82 ATOM 89 CG TYR B 386 22.157 18.414 2.361 1.00 22.88 ATOM 90 CD1 TYR B 386 21.252 19.384 1.937 1.00 21.71 ATOM 91 CD2 TYR B 386 21.954 17.826 3.603 1.00 21.76 ATOM 92 CE1 TYR B 386 20.167 19.731 2.722 1.00 21.28 ATOM 93 CE2 TYR B 386 20.870 18.165 4.383 1.00 20.83 ATOM 94 CZ TYR B 386 19.981 19.114 3.944 1.00 20.59 ATOM 95 OH TYR B 386 18.899 19.453 4.738 1.00 21.09 ATOM 96 N ALA B 387 24.057 20.613 3.467 1.00 24.44 ATOM 97 CA ALA B 387 24.103 21.014 4.868 1.00 25.19 ATOM 98 C ALA B 387 22.723 21.475 5.315 1.00 25.32 ATOM 99 O ALA B 387 21.977 22.086 4.540 1.00 25.29 ATOM 100 CB ALA B 387 25.141 22.132 5.117 1.00 27.46 ATOM 101 N SER B 388 22.379 21.174 6.564 1.00 25.44 ATOM 102 CA SER B 388 21.038 21.418 7.077 1.00 24.79 ATOM 103 C SER B 388 21.026 22.554 8.097 1.00 25.36 ATOM 104 O SER B 388 22.022 22.819 8.776 1.00 27.90 ATOM 105 CB SER B 388 20.463 20.145 7.715 1.00 22.63 ATOM 106 OG SER B 388 19.183 20.396 8.279 1.00 24.96 ATOM 107 N ARG B 389 19.876 23.222 8.199 1.00 25.33 ATOM 108 CA ARG B 389 19.672 24.196 9.267 1.00 27.48 ATOM 109 C ARG B 389 19.477 23.541 10.631 1.00 28.40 ATOM 110 O ARG B 389 19.633 24.217 11.651 1.00 29.57 ATOM 111 CB ARG B 389 18.472 25.094 8.953 1.00 27.42 ATOM 112 CG ARG B 389 18.728 26.131 7.863 1.00 30.87 ATOM 113 CD ARG B 389 17.433 26.851 7.509 1.00 31.40 ATOM 114 NE ARG B 389 17.586 27.736 6.354 1.00 35.02 ATOM 115 CZ ARG B 389 17.472 27.338 5.092 1.00 33.38 ATOM 116 NH1 ARG B 389 17.214 26.066 4.825 1.00 30.71 ATOM 117 NH2 ARG B 389 17.612 28.212 4.100 1.00 33.54 ATOM 118 N ASP B 390 19.105 22.265 10.689 1.00 24.55 ATOM 119 CA ASP B 390 18.915 21.603 11.978 1.00 24.37 ATOM 120 C ASP B 390 19.424 20.173 11.877 1.00 25.02 ATOM 121 O ASP B 390 19.757 19.684 10.790 1.00 24.63 ATOM 122 CB ASP B 390 17.449 21.701 12.474 1.00 25.85 ATOM 123 CG ASP B 390 16.460 20.797 11.718 1.00 26.64 ATOM 124 OD1 ASP B 390 16.787 20.233 10.648 1.00 25.85 ATOM 125 OD2 ASP B 390 15.312 20.663 12.224 1.00 28.11 ATOM 126 N THR B 391 19.521 19.510 13.030 1.00 25.21 ATOM 127 CA THR B 391 20.092 18.166 13.043 1.00 26.87 ATOM 128 C THR B 391 19.191 17.167 12.327 1.00 23.35 ATOM 129 O THR B 391 19.682 16.304 11.584 1.00 24.31 ATOM 130 CB THR B 391 20.336 17.696 14.472 1.00 28.36 ATOM 131 OG1 THR B 391 19.100 17.732 15.207 1.00 29.86 ATOM 132 CG2 THR B 391 21.383 18.574 15.140 1.00 28.22 ATOM 133 N TYR B 392 17.877 17.267 12.539 1.00 23.40 ATOM 134 CA TYR B 392 16.978 16.240 12.015 1.00 21.35 ATOM 135 C TYR B 392 17.090 16.127 10.501 1.00 20.38 ATOM 136 O TYR B 392 17.172 15.021 9.969 1.00 20.06 ATOM 137 CB TYR B 392 15.522 16.499 12.411 1.00 21.86 ATOM 138 CG TYR B 392 14.567 15.560 11.667 1.00 21.44 ATOM 139 CD1 TYR B 392 14.437 14.222 12.042 1.00 21.73 ATOM 140 CD2 TYR B 392 13.831 16.003 10.576 1.00 20.32 ATOM 141 CE1 TYR B 392 13.596 13.358 11.362 1.00 19.74 ATOM 142 CE2 TYR B 392 12.969 15.130 9.888 1.00 20.00 ATOM 143 CZ TYR B 392 12.863 13.817 10.286 1.00 20.45 ATOM 144 OH TYR B 392 12.020 12.953 9.618 1.00 18.83 ATOM 145 N LYS B 393 17.074 17.251 9.783 1.00 19.96 ATOM 146 CA LYS B 393 17.053 17.145 8.325 1.00 19.40 ATOM 147 C LYS B 393 18.363 16.588 7.775 1.00 20.85 ATOM 148 O LYS B 393 18.352 15.934 6.723 1.00 20.07 ATOM 149 CB LYS B 393 16.716 18.501 7.691 1.00 20.01 ATOM 150 CG LYS B 393 15.255 18.889 7.891 1.00 19.89 ATOM 151 CD LYS B 393 14.842 20.073 7.004 1.00 22.22 ATOM 152 CE LYS B 393 15.301 21.404 7.596 1.00 23.69 ATOM 153 NZ LYS B 393 14.794 21.585 8.981 1.00 24.37 ATOM 154 N LEU B 394 19.489 16.818 8.467 1.00 20.50 ATOM 155 CA LEU B 394 20.722 16.125 8.106 1.00 20.27 ATOM 156 C LEU B 394 20.583 14.616 8.314 1.00 20.32 ATOM 157 O LEU B 394 20.922 13.820 7.423 1.00 20.09 ATOM 158 CB LEU B 394 21.910 16.666 8.907 1.00 23.31 ATOM 159 CG LEU B 394 23.232 15.955 8.558 1.00 25.22 ATOM 160 CD1 LEU B 394 23.548 16.177 7.085 1.00 23.47 ATOM 161 CD2 LEU B 394 24.413 16.414 9.419 1.00 25.94 ATOM 162 N LYS B 395 20.089 14.198 9.492 1.00 20.11 ATOM 163 CA LYS B 395 19.919 12.761 9.734 1.00 19.84 ATOM 164 C LYS B 395 18.998 12.121 8.691 1.00 18.86 ATOM 165 O LYS B 395 19.289 11.031 8.164 1.00 16.33 ATOM 166 CB LYS B 395 19.371 12.515 11.138 1.00 21.77 ATOM 167 CG LYS B 395 19.197 11.029 11.447 1.00 21.84 ATOM 168 CD LYS B 395 18.625 10.783 12.827 1.00 23.63 ATOM 169 CE LYS B 395 18.473 9.282 13.073 1.00 23.92 ATOM 170 NZ LYS B 395 17.739 8.938 14.319 1.00 24.45 ATOM 171 N ARG B 396 17.876 12.781 8.391 1.00 17.20 ATOM 172 CA ARG B 396 16.953 12.285 7.373 1.00 17.03 ATOM 173 C ARG B 396 17.631 12.241 6.014 1.00 17.57 ATOM 174 O ARG B 396 17.392 11.323 5.217 1.00 15.76 ATOM 175 CB ARG B 396 15.707 13.179 7.313 1.00 17.06 ATOM 176 CG ARG B 396 14.529 12.587 6.506 1.00 17.30 ATOM 177 CD ARG B 396 13.355 13.583 6.462 1.00 17.38 ATOM 178 NE ARG B 396 13.751 14.887 5.909 1.00 18.02 ATOM 179 CZ ARG B 396 12.931 15.934 5.806 1.00 19.05 ATOM 180 NH1 ARG B 396 11.670 15.839 6.212 1.00 17.24 ATOM 181 NH2 ARG B 396 13.372 17.086 5.323 1.00 17.36 ATOM 182 N HIS B 397 18.468 13.247 5.733 1.00 17.72 ATOM 183 CA HIS B 397 19.239 13.282 4.496 1.00 16.95 ATOM 184 C HIS B 397 20.160 12.073 4.355 1.00 16.24 ATOM 185 O HIS B 397 20.445 11.641 3.227 1.00 17.24 ATOM 186 CB HIS B 397 20.071 14.567 4.437 1.00 18.07 ATOM 187 CG HIS B 397 21.123 14.544 3.378 1.00 19.08 ATOM 188 ND1 HIS B 397 20.826 14.676 2.037 1.00 18.65 ATOM 189 CD2 HIS B 397 22.467 14.381 3.455 1.00 19.41 ATOM 190 CE1 HIS B 397 21.945 14.618 1.336 1.00 20.14 ATOM 191 NE2 HIS B 397 22.953 14.442 2.173 1.00 21.24 ATOM 192 N MET B 398 20.706 11.571 5.471 1.00 16.92 ATOM 193 CA MET B 398 21.662 10.461 5.373 1.00 18.14 ATOM 194 C MET B 398 21.013 9.208 4.779 1.00 17.29 ATOM 195 O MET B 398 21.711 8.329 4.230 1.00 17.76 ATOM 196 CB MET B 398 22.251 10.162 6.748 1.00 19.77 ATOM 197 CG MET B 398 23.002 11.341 7.366 1.00 19.98 ATOM 198 SD MET B 398 24.146 12.137 6.237 1.00 21.21 ATOM 199 CE MET B 398 25.330 10.810 5.945 1.00 21.28 ATOM 200 N ARG B 399 19.681 9.120 4.864 1.00 17.75 ATOM 201 CA ARG B 399 18.953 8.024 4.228 1.00 17.76 ATOM 202 C ARG B 399 19.207 7.969 2.723 1.00 15.85 ATOM 203 O ARG B 399 19.195 6.883 2.130 1.00 15.37 ATOM 204 CB ARG B 399 17.450 8.165 4.487 1.00 16.46 ATOM 205 CG ARG B 399 17.060 8.216 5.965 1.00 16.43 ATOM 206 CD ARG B 399 15.522 8.192 6.142 1.00 17.41 ATOM 207 NE ARG B 399 15.163 8.631 7.482 1.00 16.77 ATOM 208 CZ ARG B 399 13.967 9.097 7.816 1.00 17.46 ATOM 209 NH1 ARG B 399 13.004 9.146 6.898 1.00 15.68 ATOM 210 NH2 ARG B 399 13.732 9.491 9.066 1.00 18.61 ATOM 211 N THR B 400 19.459 9.123 2.096 1.00 15.78 ATOM 212 CA THR B 400 19.711 9.136 0.655 1.00 14.99 ATOM 213 C THR B 400 21.037 8.480 0.307 1.00 17.15 ATOM 214 O THR B 400 21.182 7.928 -0.787 1.00 17.18 ATOM 215 CB THR B 400 19.699 10.565 0.123 1.00 18.00 ATOM 216 OG1 THR B 400 20.859 11.272 0.593 1.00 16.35 ATOM 217 CG2 THR B 400 18.416 11.301 0.582 1.00 16.04 ATOM 218 N HIS B 401 22.005 8.511 1.221 1.00 16.40 ATOM 219 CA HIS B 401 23.262 7.832 0.939 1.00 19.53 ATOM 220 C HIS B 401 23.178 6.341 1.210 1.00 18.25 ATOM 221 O HIS B 401 23.722 5.540 0.433 1.00 18.63 ATOM 222 CB HIS B 401 24.389 8.444 1.773 1.00 18.08 ATOM 223 CG HIS B 401 24.747 9.829 1.361 1.00 20.26 ATOM 224 ND1 HIS B 401 25.380 10.108 0.167 1.00 20.32 ATOM 225 CD2 HIS B 401 24.548 11.022 1.973 1.00 19.72 ATOM 226 CE1 HIS B 401 25.562 11.410 0.067 1.00 22.18 ATOM 227 NE2 HIS B 401 25.064 11.988 1.145 1.00 21.12 ATOM 228 N SER B 402 22.512 5.929 2.297 1.00 17.10 ATOM 229 CA SER B 402 22.517 4.485 2.544 1.00 17.26 ATOM 230 C SER B 402 21.421 3.739 1.778 1.00 18.64 ATOM 231 O SER B 402 21.575 2.546 1.509 1.00 16.86 ATOM 232 CB SER B 402 22.423 4.196 4.038 1.00 17.91 ATOM 233 OG SER B 402 21.610 5.154 4.677 1.00 19.86 ATOM 234 ZN ZN B 505 25.044 13.943 1.895 1.00 23.44 TER