HEADER DNA BINDING PROTEIN/DNA 31-DEC-69 5YEH TITLE Crystal struture of CTCF ZFs4-8-eCBS COMPND MOL_ID: 1; COMPND 2 MOLECULE: Transcriptional repressor CTCF; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP residues ; COMPND 5 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.33 ANGSTORMS DBREF 5YEH A 349 490 UNP P49711 CTCF_HUMAN 349 490 SEQRES 1 A 28 GLY GLU ARG PRO PHE GLN CYS SER LEU CYS SER TYR ALA SEQRES 2 A 28 SER ARG ASP THR TYR LYS LEU LYS ARG HIS MET ARG THR SEQRES 3 A 28 HIS SER ATOM 1 N GLY A 375 3.788 -18.437 -6.945 1.00 84.01 ATOM 2 CA GLY A 375 4.574 -19.301 -6.098 1.00 80.75 ATOM 3 C GLY A 375 5.056 -20.567 -6.763 1.00 74.01 ATOM 4 O GLY A 375 5.527 -21.471 -6.061 1.00 76.43 ATOM 5 N GLU A 376 4.941 -20.663 -8.088 1.00 66.34 ATOM 6 CA GLU A 376 5.433 -21.827 -8.807 1.00 67.34 ATOM 7 C GLU A 376 6.953 -21.863 -8.740 1.00 74.48 ATOM 8 O GLU A 376 7.625 -20.867 -9.031 1.00 80.74 ATOM 9 CB GLU A 376 4.965 -21.797 -10.263 1.00 57.01 ATOM 10 N ARG A 377 7.491 -23.017 -8.352 1.00 77.80 ATOM 11 CA ARG A 377 8.930 -23.279 -8.336 1.00 60.18 ATOM 12 C ARG A 377 9.168 -24.470 -9.250 1.00 56.36 ATOM 13 O ARG A 377 9.107 -25.636 -8.811 1.00 64.20 ATOM 14 CB ARG A 377 9.425 -23.531 -6.910 1.00 53.77 ATOM 15 CG ARG A 377 9.300 -22.308 -5.985 1.00 40.53 ATOM 16 CD ARG A 377 9.408 -22.676 -4.516 1.00 43.12 ATOM 17 NE ARG A 377 9.413 -21.495 -3.647 1.00 54.85 ATOM 18 CZ ARG A 377 10.513 -20.868 -3.229 1.00 63.93 ATOM 19 NH1 ARG A 377 11.714 -21.306 -3.593 1.00 59.28 ATOM 20 NH2 ARG A 377 10.417 -19.803 -2.440 1.00 54.18 ATOM 21 N PRO A 378 9.401 -24.231 -10.543 1.00 65.92 ATOM 22 CA PRO A 378 9.465 -25.347 -11.494 1.00 64.65 ATOM 23 C PRO A 378 10.720 -26.188 -11.389 1.00 76.19 ATOM 24 O PRO A 378 10.652 -27.400 -11.625 1.00 82.43 ATOM 25 CB PRO A 378 9.380 -24.654 -12.862 1.00 65.36 ATOM 26 CG PRO A 378 8.928 -23.257 -12.582 1.00 65.95 ATOM 27 CD PRO A 378 9.410 -22.923 -11.216 1.00 63.70 ATOM 28 N PHE A 379 11.865 -25.598 -11.068 1.00 79.69 ATOM 29 CA PHE A 379 13.147 -26.285 -11.191 1.00 69.93 ATOM 30 C PHE A 379 13.522 -26.897 -9.853 1.00 66.31 ATOM 31 O PHE A 379 13.832 -26.183 -8.894 1.00 66.00 ATOM 32 CB PHE A 379 14.215 -25.329 -11.705 1.00 57.11 ATOM 33 CG PHE A 379 13.822 -24.653 -12.979 1.00 64.26 ATOM 34 CD1 PHE A 379 13.973 -25.305 -14.194 1.00 62.37 ATOM 35 CD2 PHE A 379 13.272 -23.376 -12.965 1.00 67.02 ATOM 36 CE1 PHE A 379 13.606 -24.690 -15.375 1.00 69.26 ATOM 37 CE2 PHE A 379 12.901 -22.752 -14.146 1.00 67.18 ATOM 38 CZ PHE A 379 13.070 -23.411 -15.353 1.00 69.48 ATOM 39 N GLN A 380 13.470 -28.221 -9.791 1.00 63.89 ATOM 40 CA GLN A 380 13.700 -28.943 -8.557 1.00 60.72 ATOM 41 C GLN A 380 15.141 -29.414 -8.498 1.00 64.53 ATOM 42 O GLN A 380 15.691 -29.917 -9.484 1.00 59.21 ATOM 43 CB GLN A 380 12.750 -30.139 -8.433 1.00 55.15 ATOM 44 N CYS A 381 15.751 -29.226 -7.335 1.00 64.63 ATOM 45 CA CYS A 381 17.066 -29.785 -7.084 1.00 65.58 ATOM 46 C CYS A 381 16.934 -31.300 -7.072 1.00 63.62 ATOM 47 O CYS A 381 15.965 -31.842 -6.534 1.00 66.46 ATOM 48 CB CYS A 381 17.613 -29.268 -5.745 1.00 58.38 ATOM 49 SG CYS A 381 19.200 -29.955 -5.155 1.00 44.01 ATOM 50 N SER A 382 17.883 -31.979 -7.707 1.00 60.70 ATOM 51 CA SER A 382 17.883 -33.430 -7.770 1.00 62.14 ATOM 52 C SER A 382 18.550 -34.052 -6.553 1.00 66.02 ATOM 53 O SER A 382 18.867 -35.247 -6.581 1.00 69.49 ATOM 54 CB SER A 382 18.580 -33.907 -9.046 1.00 67.22 ATOM 55 OG SER A 382 19.974 -33.697 -8.953 1.00 74.70 ATOM 56 N LEU A 383 18.762 -33.271 -5.486 1.00 62.59 ATOM 57 CA LEU A 383 19.524 -33.725 -4.326 1.00 54.29 ATOM 58 C LEU A 383 18.770 -33.525 -3.022 1.00 59.51 ATOM 59 O LEU A 383 18.983 -34.263 -2.054 1.00 65.56 ATOM 60 CB LEU A 383 20.857 -32.973 -4.261 1.00 51.21 ATOM 61 CG LEU A 383 22.026 -33.468 -5.114 1.00 52.70 ATOM 62 CD1 LEU A 383 23.279 -32.659 -4.840 1.00 34.85 ATOM 63 CD2 LEU A 383 22.287 -34.922 -4.775 1.00 61.17 ATOM 64 N CYS A 384 17.892 -32.526 -2.987 1.00 55.94 ATOM 65 CA CYS A 384 17.142 -32.194 -1.787 1.00 50.79 ATOM 66 C CYS A 384 15.790 -31.641 -2.210 1.00 65.80 ATOM 67 O CYS A 384 15.433 -31.653 -3.393 1.00 73.10 ATOM 68 CB CYS A 384 17.892 -31.201 -0.895 1.00 44.16 ATOM 69 SG CYS A 384 17.746 -29.451 -1.353 1.00 48.01 ATOM 70 N SER A 385 15.015 -31.200 -1.220 1.00 56.00 ATOM 71 CA SER A 385 13.672 -30.687 -1.464 1.00 66.60 ATOM 72 C SER A 385 13.609 -29.187 -1.773 1.00 73.19 ATOM 73 O SER A 385 12.560 -28.565 -1.590 1.00 62.53 ATOM 74 CB SER A 385 12.790 -31.007 -0.261 1.00 66.73 ATOM 75 OG SER A 385 13.232 -30.317 0.897 1.00 69.46 ATOM 76 N TYR A 386 14.690 -28.587 -2.267 1.00 66.87 ATOM 77 CA TYR A 386 14.657 -27.203 -2.733 1.00 53.95 ATOM 78 C TYR A 386 14.157 -27.160 -4.178 1.00 39.95 ATOM 79 O TYR A 386 14.370 -28.101 -4.938 1.00 45.84 ATOM 80 CB TYR A 386 16.051 -26.555 -2.653 1.00 64.29 ATOM 81 CG TYR A 386 16.131 -25.189 -3.272 1.00 53.13 ATOM 82 CD1 TYR A 386 16.558 -25.010 -4.587 1.00 45.69 ATOM 83 CD2 TYR A 386 15.684 -24.089 -2.563 1.00 49.16 ATOM 84 CE1 TYR A 386 16.590 -23.748 -5.154 1.00 42.78 ATOM 85 CE2 TYR A 386 15.709 -22.841 -3.106 1.00 49.13 ATOM 86 CZ TYR A 386 16.161 -22.676 -4.405 1.00 45.11 ATOM 87 OH TYR A 386 16.170 -21.416 -4.936 1.00 53.01 ATOM 88 N ALA A 387 13.478 -26.073 -4.550 1.00 41.68 ATOM 89 CA ALA A 387 12.974 -25.872 -5.904 1.00 53.17 ATOM 90 C ALA A 387 12.902 -24.377 -6.178 1.00 50.51 ATOM 91 O ALA A 387 12.413 -23.595 -5.359 1.00 53.61 ATOM 92 CB ALA A 387 11.599 -26.527 -6.122 1.00 52.89 ATOM 93 N SER A 388 13.360 -23.989 -7.352 1.00 47.60 ATOM 94 CA SER A 388 13.526 -22.584 -7.659 1.00 51.58 ATOM 95 C SER A 388 12.515 -22.138 -8.704 1.00 58.26 ATOM 96 O SER A 388 11.948 -22.954 -9.433 1.00 62.38 ATOM 97 CB SER A 388 14.958 -22.329 -8.136 1.00 56.20 ATOM 98 OG SER A 388 15.065 -21.151 -8.915 1.00 76.75 ATOM 99 N ARG A 389 12.275 -20.822 -8.758 1.00 54.75 ATOM 100 CA ARG A 389 11.386 -20.279 -9.775 1.00 64.33 ATOM 101 C ARG A 389 12.105 -19.972 -11.086 1.00 70.97 ATOM 102 O ARG A 389 11.428 -19.690 -12.082 1.00 71.42 ATOM 103 CB ARG A 389 10.652 -19.023 -9.246 1.00 63.70 ATOM 104 CG ARG A 389 11.487 -17.766 -9.137 1.00 72.24 ATOM 105 CD ARG A 389 11.225 -16.828 -10.314 1.00 78.01 ATOM 106 NE ARG A 389 12.302 -15.851 -10.492 1.00 75.87 ATOM 107 CZ ARG A 389 12.297 -14.593 -10.072 1.00 79.11 ATOM 108 NH1 ARG A 389 13.366 -13.828 -10.295 1.00 71.29 ATOM 109 NH2 ARG A 389 11.234 -14.089 -9.462 1.00 84.73 ATOM 110 N ASP A 390 13.444 -19.994 -11.112 1.00 68.28 ATOM 111 CA ASP A 390 14.193 -19.846 -12.358 1.00 60.74 ATOM 112 C ASP A 390 15.463 -20.684 -12.287 1.00 54.75 ATOM 113 O ASP A 390 15.854 -21.181 -11.226 1.00 66.63 ATOM 114 CB ASP A 390 14.550 -18.387 -12.676 1.00 59.12 ATOM 115 CG ASP A 390 15.567 -17.811 -11.718 1.00 72.88 ATOM 116 OD1 ASP A 390 15.207 -17.613 -10.544 1.00 73.55 ATOM 117 OD2 ASP A 390 16.726 -17.564 -12.140 1.00 81.19 ATOM 118 N THR A 391 16.150 -20.785 -13.423 1.00 54.85 ATOM 119 CA THR A 391 17.273 -21.707 -13.500 1.00 60.50 ATOM 120 C THR A 391 18.462 -21.201 -12.694 1.00 51.18 ATOM 121 O THR A 391 19.170 -21.993 -12.052 1.00 56.70 ATOM 122 CB THR A 391 17.658 -21.948 -14.966 1.00 64.62 ATOM 123 OG1 THR A 391 18.674 -22.957 -15.033 1.00 62.79 ATOM 124 CG2 THR A 391 18.171 -20.672 -15.632 1.00 71.87 ATOM 125 N TYR A 392 18.671 -19.885 -12.675 1.00 47.76 ATOM 126 CA TYR A 392 19.867 -19.350 -12.047 1.00 46.25 ATOM 127 C TYR A 392 19.911 -19.678 -10.558 1.00 40.84 ATOM 128 O TYR A 392 20.922 -20.161 -10.054 1.00 49.25 ATOM 129 CB TYR A 392 19.958 -17.844 -12.255 1.00 38.32 ATOM 130 CG TYR A 392 21.119 -17.277 -11.469 1.00 58.30 ATOM 131 CD1 TYR A 392 22.404 -17.283 -11.998 1.00 55.46 ATOM 132 CD2 TYR A 392 20.942 -16.772 -10.186 1.00 33.49 ATOM 133 CE1 TYR A 392 23.469 -16.779 -11.288 1.00 58.05 ATOM 134 CE2 TYR A 392 22.010 -16.269 -9.475 1.00 46.70 ATOM 135 CZ TYR A 392 23.269 -16.275 -10.026 1.00 45.38 ATOM 136 OH TYR A 392 24.338 -15.772 -9.296 1.00 57.57 ATOM 137 N LYS A 393 18.813 -19.445 -9.838 1.00 46.52 ATOM 138 CA LYS A 393 18.847 -19.671 -8.399 1.00 46.99 ATOM 139 C LYS A 393 19.026 -21.142 -8.061 1.00 44.12 ATOM 140 O LYS A 393 19.564 -21.453 -6.995 1.00 47.00 ATOM 141 CB LYS A 393 17.595 -19.099 -7.742 1.00 32.36 ATOM 142 CG LYS A 393 17.530 -17.591 -7.779 1.00 34.10 ATOM 143 CD LYS A 393 16.517 -17.096 -6.753 1.00 58.85 ATOM 144 CE LYS A 393 15.215 -16.584 -7.392 1.00 66.59 ATOM 145 NZ LYS A 393 15.440 -15.313 -8.130 1.00 69.89 ATOM 146 N LEU A 394 18.645 -22.056 -8.960 1.00 49.11 ATOM 147 CA LEU A 394 18.975 -23.464 -8.730 1.00 49.04 ATOM 148 C LEU A 394 20.459 -23.743 -8.978 1.00 43.28 ATOM 149 O LEU A 394 21.109 -24.424 -8.171 1.00 38.34 ATOM 150 CB LEU A 394 18.108 -24.384 -9.579 1.00 40.41 ATOM 151 CG LEU A 394 18.445 -25.865 -9.397 1.00 38.57 ATOM 152 CD1 LEU A 394 18.272 -26.247 -7.972 1.00 40.90 ATOM 153 CD2 LEU A 394 17.520 -26.700 -10.284 1.00 55.95 ATOM 154 N LYS A 395 21.011 -23.253 -10.092 1.00 32.53 ATOM 155 CA LYS A 395 22.445 -23.444 -10.311 1.00 36.99 ATOM 156 C LYS A 395 23.250 -22.922 -9.125 1.00 36.17 ATOM 157 O LYS A 395 24.119 -23.624 -8.601 1.00 46.45 ATOM 158 CB LYS A 395 22.903 -22.771 -11.605 1.00 42.97 ATOM 159 CG LYS A 395 23.049 -23.744 -12.761 1.00 56.84 ATOM 160 CD LYS A 395 23.110 -23.054 -14.106 1.00 59.87 ATOM 161 CE LYS A 395 24.503 -23.123 -14.695 1.00 74.14 ATOM 162 NZ LYS A 395 24.565 -22.387 -15.990 1.00 81.05 ATOM 163 N ARG A 396 22.906 -21.727 -8.638 1.00 31.29 ATOM 164 CA ARG A 396 23.604 -21.165 -7.485 1.00 37.74 ATOM 165 C ARG A 396 23.317 -21.982 -6.230 1.00 35.39 ATOM 166 O ARG A 396 24.223 -22.207 -5.429 1.00 35.80 ATOM 167 CB ARG A 396 23.197 -19.688 -7.298 1.00 36.27 ATOM 168 CG ARG A 396 23.663 -18.999 -6.005 1.00 41.68 ATOM 169 CD ARG A 396 23.073 -17.547 -5.829 1.00 25.65 ATOM 170 NE ARG A 396 21.688 -17.651 -5.440 1.00 26.86 ATOM 171 CZ ARG A 396 20.850 -16.628 -5.332 1.00 29.95 ATOM 172 NH1 ARG A 396 21.250 -15.389 -5.578 1.00 26.83 ATOM 173 NH2 ARG A 396 19.596 -16.850 -4.992 1.00 31.56 ATOM 174 N HIS A 397 22.119 -22.562 -6.099 1.00 36.26 ATOM 175 CA HIS A 397 21.885 -23.395 -4.925 1.00 33.23 ATOM 176 C HIS A 397 22.745 -24.653 -4.959 1.00 36.96 ATOM 177 O HIS A 397 23.062 -25.203 -3.904 1.00 32.94 ATOM 178 CB HIS A 397 20.411 -23.755 -4.832 1.00 40.51 ATOM 179 CG HIS A 397 20.102 -24.910 -3.930 1.00 38.85 ATOM 180 ND1 HIS A 397 19.843 -24.748 -2.585 1.00 51.20 ATOM 181 CD2 HIS A 397 19.963 -26.234 -4.183 1.00 36.26 ATOM 182 CE1 HIS A 397 19.590 -25.925 -2.042 1.00 38.83 ATOM 183 NE2 HIS A 397 19.647 -26.842 -2.990 1.00 34.59 ATOM 184 N MET A 398 23.138 -25.122 -6.148 1.00 34.18 ATOM 185 CA MET A 398 23.981 -26.313 -6.204 1.00 33.01 ATOM 186 C MET A 398 25.373 -26.081 -5.597 1.00 35.41 ATOM 187 O MET A 398 26.040 -27.051 -5.218 1.00 36.39 ATOM 188 CB MET A 398 24.088 -26.828 -7.642 1.00 31.97 ATOM 189 CG MET A 398 22.776 -27.232 -8.286 1.00 49.44 ATOM 190 SD MET A 398 21.847 -28.419 -7.286 1.00 51.86 ATOM 191 CE MET A 398 22.579 -29.976 -7.789 1.00 54.01 ATOM 192 N ARG A 399 25.845 -24.836 -5.532 1.00 25.55 ATOM 193 CA ARG A 399 27.147 -24.605 -4.911 1.00 45.15 ATOM 194 C ARG A 399 27.148 -25.009 -3.442 1.00 47.92 ATOM 195 O ARG A 399 28.194 -25.421 -2.921 1.00 44.49 ATOM 196 CB ARG A 399 27.573 -23.146 -5.034 1.00 47.96 ATOM 197 CG ARG A 399 27.312 -22.483 -6.366 1.00 46.06 ATOM 198 CD ARG A 399 27.833 -21.053 -6.258 1.00 35.31 ATOM 199 NE ARG A 399 27.518 -20.249 -7.417 1.00 44.15 ATOM 200 CZ ARG A 399 27.429 -18.932 -7.371 1.00 53.84 ATOM 201 NH1 ARG A 399 27.627 -18.305 -6.225 1.00 72.91 ATOM 202 NH2 ARG A 399 27.151 -18.243 -8.457 1.00 50.87 ATOM 203 N THR A 400 26.001 -24.894 -2.757 1.00 35.02 ATOM 204 CA THR A 400 25.943 -25.301 -1.353 1.00 46.17 ATOM 205 C THR A 400 26.198 -26.794 -1.207 1.00 40.75 ATOM 206 O THR A 400 26.894 -27.223 -0.282 1.00 51.23 ATOM 207 CB THR A 400 24.577 -24.963 -0.756 1.00 48.48 ATOM 208 OG1 THR A 400 23.551 -25.416 -1.640 1.00 65.97 ATOM 209 CG2 THR A 400 24.404 -23.494 -0.661 1.00 43.52 ATOM 210 N HIS A 401 25.645 -27.594 -2.118 1.00 40.74 ATOM 211 CA HIS A 401 25.883 -29.030 -2.093 1.00 45.21 ATOM 212 C HIS A 401 27.333 -29.355 -2.451 1.00 40.84 ATOM 213 O HIS A 401 27.972 -30.189 -1.802 1.00 46.23 ATOM 214 CB HIS A 401 24.943 -29.725 -3.061 1.00 27.04 ATOM 215 CG HIS A 401 23.529 -29.773 -2.595 1.00 47.64 ATOM 216 ND1 HIS A 401 23.140 -30.467 -1.473 1.00 47.07 ATOM 217 CD2 HIS A 401 22.404 -29.229 -3.118 1.00 38.07 ATOM 218 CE1 HIS A 401 21.833 -30.341 -1.319 1.00 49.49 ATOM 219 NE2 HIS A 401 21.368 -29.587 -2.299 1.00 47.69 ATOM 220 N SER A 402 27.862 -28.736 -3.504 1.00 43.45 ATOM 221 CA SER A 402 29.251 -29.035 -3.839 1.00 52.21 ATOM 222 C SER A 402 30.208 -28.419 -2.839 1.00 49.56 ATOM 223 O SER A 402 31.341 -28.897 -2.703 1.00 43.57 ATOM 224 CB SER A 402 29.620 -28.523 -5.230 1.00 50.23 ATOM 225 OG SER A 402 28.967 -27.325 -5.527 1.00 60.06 ATOM 226 ZN ZN A 502 19.462 -29.176 -2.992 1.00 46.33 TER