HEADER DNA BINDING PROTEIN/DNA 31-DEC-69 5YEL TITLE Crystal structure of CTCF ZFs6-11-gb7CSE COMPND MOL_ID: 2; COMPND 2 MOLECULE: Transcriptional repressor CTCF; COMPND 3 CHAIN: A, B; COMPND 4 MUTATION: YES; COMPND 5 FRAGMENT: UNP residues ; COMPND 6 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.96 ANGSTORMS REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 27 REMARK 465 GLU A 28 DBREF 5YEL A 405 580 UNP P49711 CTCF_HUMAN 405 580 SEQRES 1 A 27 PRO TYR GLU CYS TYR ILE CYS HIS ALA ARG PHE THR GLN SEQRES 2 A 27 SER GLY THR MET LYS MET HIS ILE LEU GLN LYS HIS THR SEQRES 3 A 27 GLU ATOM 1 N PRO A 406 302.400 68.557 135.724 1.00106.75 ATOM 2 CA PRO A 406 302.332 67.250 136.384 1.00106.65 ATOM 3 C PRO A 406 303.741 66.684 136.574 1.00108.43 ATOM 4 O PRO A 406 304.645 67.353 136.070 1.00111.68 ATOM 5 CB PRO A 406 301.552 66.430 135.370 1.00105.44 ATOM 6 CG PRO A 406 302.098 66.933 134.060 1.00106.39 ATOM 7 CD PRO A 406 302.296 68.424 134.257 1.00106.58 ATOM 8 N TYR A 407 303.975 65.591 137.311 1.00107.17 ATOM 9 CA TYR A 407 302.994 64.850 138.107 1.00103.34 ATOM 10 C TYR A 407 303.572 64.875 139.525 1.00 99.45 ATOM 11 O TYR A 407 304.253 63.936 139.935 1.00 96.70 ATOM 12 CB TYR A 407 302.834 63.388 137.636 1.00100.11 ATOM 13 CG TYR A 407 302.082 63.190 136.345 1.00 97.43 ATOM 14 CD1 TYR A 407 302.702 63.365 135.122 1.00 96.50 ATOM 15 CD2 TYR A 407 300.748 62.807 136.351 1.00 95.00 ATOM 16 CE1 TYR A 407 302.006 63.196 133.942 1.00 93.68 ATOM 17 CE2 TYR A 407 300.050 62.625 135.171 1.00 94.00 ATOM 18 CZ TYR A 407 300.689 62.821 133.968 1.00 92.74 ATOM 19 OH TYR A 407 300.007 62.647 132.784 1.00 89.97 ATOM 20 N GLU A 408 303.317 65.962 140.256 1.00 96.79 ATOM 21 CA GLU A 408 303.861 66.101 141.604 1.00 94.74 ATOM 22 C GLU A 408 303.289 65.033 142.537 1.00 93.22 ATOM 23 O GLU A 408 302.096 65.049 142.855 1.00 93.34 ATOM 24 CB GLU A 408 303.578 67.511 142.148 1.00 98.16 ATOM 25 CG GLU A 408 303.646 68.653 141.107 1.00100.59 ATOM 26 CD GLU A 408 304.912 69.507 141.194 1.00 99.35 ATOM 27 OE1 GLU A 408 305.774 69.392 140.304 1.00 94.13 ATOM 28 OE2 GLU A 408 305.039 70.316 142.128 1.00101.59 ATOM 29 N CYS A 409 304.122 64.110 142.980 1.00 93.55 ATOM 30 CA CYS A 409 303.656 63.098 143.905 1.00 94.91 ATOM 31 C CYS A 409 303.255 63.779 145.196 1.00 94.77 ATOM 32 O CYS A 409 303.914 64.713 145.641 1.00 93.01 ATOM 33 CB CYS A 409 304.741 62.044 144.143 1.00 97.44 ATOM 34 SG CYS A 409 305.354 61.850 145.833 1.00 98.94 ATOM 35 N TYR A 410 302.211 63.273 145.828 1.00 95.50 ATOM 36 CA TYR A 410 301.747 63.907 147.042 1.00 96.37 ATOM 37 C TYR A 410 302.770 63.889 148.173 1.00 93.41 ATOM 38 O TYR A 410 302.910 64.879 148.882 1.00 93.79 ATOM 39 CB TYR A 410 300.408 63.327 147.495 1.00 93.19 ATOM 40 CG TYR A 410 300.392 61.843 147.696 1.00 90.41 ATOM 41 CD1 TYR A 410 300.646 60.981 146.652 1.00 91.16 ATOM 42 CD2 TYR A 410 300.091 61.306 148.930 1.00 87.46 ATOM 43 CE1 TYR A 410 300.617 59.617 146.840 1.00 88.82 ATOM 44 CE2 TYR A 410 300.060 59.947 149.128 1.00 85.41 ATOM 45 CZ TYR A 410 300.325 59.108 148.081 1.00 84.47 ATOM 46 OH TYR A 410 300.291 57.753 148.283 1.00 80.09 ATOM 47 N ILE A 411 303.458 62.774 148.372 1.00 87.68 ATOM 48 CA ILE A 411 304.382 62.695 149.492 1.00 86.11 ATOM 49 C ILE A 411 305.651 63.567 149.489 1.00 95.36 ATOM 50 O ILE A 411 305.928 64.216 150.478 1.00 99.82 ATOM 51 CB ILE A 411 304.759 61.239 149.791 1.00 82.82 ATOM 52 CG1 ILE A 411 303.505 60.406 149.999 1.00 81.48 ATOM 53 CG2 ILE A 411 305.621 61.164 151.031 1.00 81.71 ATOM 54 CD1 ILE A 411 303.768 58.925 150.114 1.00 78.86 ATOM 55 N CYS A 412 306.409 63.621 148.400 1.00 97.64 ATOM 56 CA CYS A 412 307.667 64.382 148.415 1.00 98.22 ATOM 57 C CYS A 412 307.601 65.563 147.471 1.00101.03 ATOM 58 O CYS A 412 308.536 66.338 147.331 1.00 97.25 ATOM 59 CB CYS A 412 308.861 63.480 148.090 1.00 95.44 ATOM 60 SG CYS A 412 308.858 62.712 146.455 1.00100.45 ATOM 61 N HIS A 413 306.447 65.663 146.842 1.00108.02 ATOM 62 CA HIS A 413 306.099 66.642 145.802 1.00112.06 ATOM 63 C HIS A 413 307.163 66.692 144.698 1.00110.90 ATOM 64 O HIS A 413 307.251 67.660 143.937 1.00113.41 ATOM 65 CB HIS A 413 305.818 68.024 146.404 1.00114.72 ATOM 66 CG HIS A 413 304.866 67.989 147.568 1.00113.37 ATOM 67 ND1 HIS A 413 305.284 68.137 148.873 1.00114.13 ATOM 68 CD2 HIS A 413 303.523 67.807 147.626 1.00111.44 ATOM 69 CE1 HIS A 413 304.243 68.054 149.683 1.00113.20 ATOM 70 NE2 HIS A 413 303.161 67.854 148.952 1.00112.05 ATOM 71 N ALA A 414 307.961 65.622 144.592 1.00104.42 ATOM 72 CA ALA A 414 308.791 65.405 143.412 1.00 97.45 ATOM 73 C ALA A 414 307.929 65.374 142.151 1.00 90.00 ATOM 74 O ALA A 414 306.767 64.951 142.169 1.00 88.65 ATOM 75 CB ALA A 414 309.584 64.103 143.520 1.00 81.89 ATOM 76 N ARG A 415 308.544 65.772 141.035 1.00 87.95 ATOM 77 CA ARG A 415 307.851 66.044 139.780 1.00 95.00 ATOM 78 C ARG A 415 308.490 65.246 138.653 1.00 99.92 ATOM 79 O ARG A 415 309.708 65.060 138.628 1.00100.17 ATOM 80 CB ARG A 415 307.913 67.540 139.449 1.00 96.71 ATOM 81 N PHE A 416 307.659 64.797 137.716 1.00103.24 ATOM 82 CA PHE A 416 308.064 63.999 136.569 1.00103.25 ATOM 83 C PHE A 416 307.115 64.316 135.429 1.00100.62 ATOM 84 O PHE A 416 306.131 65.028 135.619 1.00102.56 ATOM 85 CB PHE A 416 308.042 62.511 136.902 1.00104.30 ATOM 86 CG PHE A 416 308.076 62.247 138.375 1.00108.54 ATOM 87 CD1 PHE A 416 306.932 62.310 139.115 1.00109.59 ATOM 88 CD2 PHE A 416 309.249 62.080 139.046 1.00111.74 ATOM 89 CE1 PHE A 416 306.959 62.128 140.482 1.00110.91 ATOM 90 CE2 PHE A 416 309.250 61.884 140.435 1.00112.32 ATOM 91 CZ PHE A 416 308.099 61.904 141.129 1.00111.67 ATOM 92 N THR A 417 307.425 63.787 134.244 1.00 94.22 ATOM 93 CA THR A 417 306.599 64.030 133.062 1.00 90.62 ATOM 94 C THR A 417 305.399 63.087 132.979 1.00 89.67 ATOM 95 O THR A 417 304.354 63.470 132.445 1.00 91.98 ATOM 96 CB THR A 417 307.454 63.921 131.801 1.00 86.64 ATOM 97 OG1 THR A 417 308.009 62.603 131.737 1.00 83.79 ATOM 98 CG2 THR A 417 308.581 64.941 131.829 1.00 87.28 ATOM 99 N GLN A 418 305.571 61.815 133.344 1.00 85.99 ATOM 100 CA GLN A 418 304.487 60.842 133.254 1.00 83.62 ATOM 101 C GLN A 418 304.128 60.200 134.591 1.00 82.01 ATOM 102 O GLN A 418 304.971 60.013 135.474 1.00 81.09 ATOM 103 CB GLN A 418 304.812 59.726 132.248 1.00 83.56 ATOM 104 CG GLN A 418 304.000 59.792 130.961 1.00 88.03 ATOM 105 CD GLN A 418 304.641 60.691 129.928 1.00 94.08 ATOM 106 OE1 GLN A 418 305.858 60.884 129.929 1.00 96.85 ATOM 107 NE2 GLN A 418 303.827 61.248 129.039 1.00 95.77 ATOM 108 N SER A 419 302.850 59.819 134.690 1.00 80.63 ATOM 109 CA SER A 419 302.332 59.178 135.897 1.00 81.03 ATOM 110 C SER A 419 303.051 57.860 136.178 1.00 80.34 ATOM 111 O SER A 419 303.179 57.454 137.338 1.00 81.97 ATOM 112 CB SER A 419 300.824 58.961 135.764 1.00 82.13 ATOM 113 OG SER A 419 300.297 58.147 136.793 1.00 83.36 ATOM 114 N GLY A 420 303.428 57.123 135.121 1.00 79.14 ATOM 115 CA GLY A 420 304.130 55.854 135.311 1.00 81.60 ATOM 116 C GLY A 420 305.508 56.018 135.924 1.00 78.59 ATOM 117 O GLY A 420 305.872 55.319 136.873 1.00 75.80 ATOM 118 N THR A 421 306.289 56.955 135.401 1.00 74.80 ATOM 119 CA THR A 421 307.561 57.247 136.043 1.00 77.11 ATOM 120 C THR A 421 307.307 57.749 137.461 1.00 81.24 ATOM 121 O THR A 421 308.092 57.494 138.383 1.00 84.25 ATOM 122 CB THR A 421 308.370 58.259 135.230 1.00 78.52 ATOM 123 OG1 THR A 421 308.290 59.549 135.845 1.00 78.15 ATOM 124 CG2 THR A 421 307.846 58.352 133.808 1.00 73.18 ATOM 125 N MET A 422 306.221 58.486 137.663 1.00 80.85 ATOM 126 CA MET A 422 305.941 58.952 139.018 1.00 82.56 ATOM 127 C MET A 422 305.657 57.791 139.976 1.00 79.15 ATOM 128 O MET A 422 306.216 57.719 141.080 1.00 80.24 ATOM 129 CB MET A 422 304.749 59.885 139.001 1.00 89.47 ATOM 130 CG MET A 422 304.125 60.000 140.365 1.00 91.99 ATOM 131 SD MET A 422 302.735 61.134 140.353 1.00 93.11 ATOM 132 CE MET A 422 301.847 60.615 141.815 1.00 89.28 ATOM 133 N LYS A 423 304.779 56.873 139.575 1.00 81.04 ATOM 134 CA LYS A 423 304.485 55.710 140.405 1.00 83.85 ATOM 135 C LYS A 423 305.734 54.864 140.601 1.00 83.28 ATOM 136 O LYS A 423 305.857 54.152 141.606 1.00 82.44 ATOM 137 CB LYS A 423 303.335 54.924 139.790 1.00 84.25 ATOM 138 CG LYS A 423 303.754 54.162 138.566 1.00 83.33 ATOM 139 CD LYS A 423 303.399 52.725 138.651 1.00 83.87 ATOM 140 CE LYS A 423 301.912 52.577 138.715 1.00 83.61 ATOM 141 NZ LYS A 423 301.532 52.138 140.075 1.00 84.50 ATOM 142 N MET A 424 306.663 54.920 139.644 1.00 81.52 ATOM 143 CA MET A 424 307.959 54.289 139.849 1.00 78.80 ATOM 144 C MET A 424 308.687 54.967 141.005 1.00 80.93 ATOM 145 O MET A 424 309.373 54.303 141.787 1.00 77.00 ATOM 146 CB MET A 424 308.801 54.354 138.579 1.00 74.13 ATOM 147 CG MET A 424 310.018 53.437 138.621 1.00 72.01 ATOM 148 SD MET A 424 309.478 51.736 138.875 1.00 72.92 ATOM 149 CE MET A 424 311.020 50.889 139.206 1.00 74.60 ATOM 150 N HIS A 425 308.593 56.303 141.100 1.00 83.70 ATOM 151 CA HIS A 425 309.188 56.996 142.249 1.00 80.66 ATOM 152 C HIS A 425 308.527 56.555 143.551 1.00 82.53 ATOM 153 O HIS A 425 309.199 56.411 144.577 1.00 74.50 ATOM 154 CB HIS A 425 309.104 58.517 142.108 1.00 79.93 ATOM 155 CG HIS A 425 308.926 59.238 143.418 1.00 85.03 ATOM 156 ND1 HIS A 425 309.939 59.391 144.342 1.00 90.67 ATOM 157 CD2 HIS A 425 307.848 59.858 143.948 1.00 88.23 ATOM 158 CE1 HIS A 425 309.494 60.063 145.390 1.00 92.29 ATOM 159 NE2 HIS A 425 308.227 60.358 145.176 1.00 90.77 ATOM 160 N ILE A 426 307.202 56.385 143.544 1.00 89.05 ATOM 161 CA ILE A 426 306.519 55.924 144.758 1.00 92.72 ATOM 162 C ILE A 426 306.996 54.524 145.137 1.00 89.81 ATOM 163 O ILE A 426 307.186 54.220 146.318 1.00 92.66 ATOM 164 CB ILE A 426 304.986 55.982 144.611 1.00 94.26 ATOM 165 CG1 ILE A 426 304.446 57.175 145.391 1.00 97.81 ATOM 166 CG2 ILE A 426 304.324 54.731 145.189 1.00 93.53 ATOM 167 CD1 ILE A 426 305.079 58.482 145.039 1.00 99.46 ATOM 168 N LEU A 427 307.182 53.648 144.144 1.00 81.02 ATOM 169 CA LEU A 427 307.640 52.280 144.410 1.00 77.67 ATOM 170 C LEU A 427 309.084 52.240 144.907 1.00 78.81 ATOM 171 O LEU A 427 309.423 51.439 145.788 1.00 78.07 ATOM 172 CB LEU A 427 307.492 51.431 143.145 1.00 74.49 ATOM 173 CG LEU A 427 307.187 49.936 143.307 1.00 71.13 ATOM 174 CD1 LEU A 427 306.010 49.738 144.243 1.00 69.15 ATOM 175 CD2 LEU A 427 306.923 49.258 141.964 1.00 68.82 ATOM 176 N GLN A 428 309.951 53.069 144.322 1.00 78.57 ATOM 177 CA GLN A 428 311.360 53.115 144.704 1.00 75.21 ATOM 178 C GLN A 428 311.562 53.725 146.090 1.00 79.60 ATOM 179 O GLN A 428 312.277 53.155 146.925 1.00 81.12 ATOM 180 CB GLN A 428 312.148 53.908 143.657 1.00 74.70 ATOM 181 CG GLN A 428 312.413 53.202 142.332 1.00 74.22 ATOM 182 CD GLN A 428 313.898 53.047 142.077 1.00 77.59 ATOM 183 OE1 GLN A 428 314.712 53.416 142.922 1.00 76.73 ATOM 184 NE2 GLN A 428 314.261 52.500 140.922 1.00 77.41 ATOM 185 N LYS A 429 310.962 54.890 146.353 1.00 82.75 ATOM 186 CA LYS A 429 311.139 55.538 147.663 1.00 80.39 ATOM 187 C LYS A 429 310.065 55.140 148.688 1.00 80.52 ATOM 188 O LYS A 429 310.389 54.648 149.764 1.00 80.56 ATOM 189 CB LYS A 429 311.151 57.080 147.557 1.00 74.44 ATOM 190 CG LYS A 429 312.419 57.753 146.998 1.00 74.52 ATOM 191 CD LYS A 429 312.435 59.193 147.509 1.00 80.69 ATOM 192 CE LYS A 429 312.755 60.251 146.482 1.00 83.79 ATOM 193 NZ LYS A 429 311.965 61.486 146.821 1.00 83.59 ATOM 194 N HIS A 430 308.797 55.380 148.353 1.00 86.88 ATOM 195 CA HIS A 430 307.679 55.047 149.237 1.00 97.30 ATOM 196 CB HIS A 430 306.546 56.035 149.013 1.00 99.79 ATOM 197 CG HIS A 430 307.016 57.447 148.896 1.00101.62 ATOM 198 ND1 HIS A 430 307.976 57.973 149.731 1.00103.23 ATOM 199 CD2 HIS A 430 306.699 58.428 148.022 1.00101.69 ATOM 200 CE1 HIS A 430 308.221 59.223 149.387 1.00103.32 ATOM 201 NE2 HIS A 430 307.457 59.523 148.353 1.00102.65 ATOM 202 ZN ZN A 601 307.901 61.007 147.122 1.00 50.73 TER