HEADER DNA BINDING PROTEIN/DNA 31-DEC-69 5YEL TITLE Crystal structure of CTCF ZFs6-11-gb7CSE COMPND MOL_ID: 2; COMPND 2 MOLECULE: Transcriptional repressor CTCF; COMPND 3 CHAIN: A, B; COMPND 4 MUTATION: YES; COMPND 5 FRAGMENT: UNP residues ; COMPND 6 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.96 ANGSTORMS DBREF 5YEL A 405 580 UNP P49711 CTCF_HUMAN 405 580 SEQRES 1 A 29 TYR ILE GLU GLN GLY LYS LYS CYS ARG TYR CYS ASP ALA SEQRES 2 A 29 VAL PHE HIS GLU ARG TYR ALA LEU ILE GLN HIS GLN LYS SEQRES 3 A 29 SER HIS LYS ATOM 1 N TYR A 462 327.494 35.463 125.946 1.00 45.92 ATOM 2 CA TYR A 462 328.626 34.691 125.447 1.00 45.73 ATOM 3 C TYR A 462 329.442 35.515 124.456 1.00 63.11 ATOM 4 O TYR A 462 328.927 35.948 123.420 1.00 86.06 ATOM 5 CB TYR A 462 328.133 33.396 124.800 1.00 43.03 ATOM 6 CG TYR A 462 329.226 32.406 124.437 1.00 56.61 ATOM 7 CD1 TYR A 462 329.458 31.280 125.219 1.00 66.37 ATOM 8 CD2 TYR A 462 330.031 32.600 123.320 1.00 64.53 ATOM 9 CE1 TYR A 462 330.457 30.374 124.894 1.00 76.92 ATOM 10 CE2 TYR A 462 331.028 31.702 122.989 1.00 75.80 ATOM 11 CZ TYR A 462 331.238 30.592 123.777 1.00 83.29 ATOM 12 OH TYR A 462 332.234 29.703 123.439 1.00 84.46 ATOM 13 N ILE A 463 330.714 35.725 124.775 1.00 57.02 ATOM 14 CA ILE A 463 331.658 36.382 123.878 1.00 60.94 ATOM 15 C ILE A 463 332.307 35.346 122.971 1.00 64.97 ATOM 16 O ILE A 463 332.764 34.295 123.436 1.00 81.35 ATOM 17 CB ILE A 463 332.715 37.172 124.667 1.00 63.42 ATOM 18 CG1 ILE A 463 332.095 38.443 125.260 1.00 61.71 ATOM 19 CG2 ILE A 463 333.905 37.493 123.795 1.00 70.75 ATOM 20 CD1 ILE A 463 331.811 38.389 126.733 1.00 69.10 ATOM 21 N GLU A 464 332.342 35.643 121.668 1.00 70.64 ATOM 22 CA GLU A 464 332.761 34.641 120.694 1.00 75.44 ATOM 23 C GLU A 464 334.246 34.322 120.824 1.00 70.56 ATOM 24 O GLU A 464 334.632 33.149 120.883 1.00 63.78 ATOM 25 CB GLU A 464 332.438 35.100 119.273 1.00 87.99 ATOM 26 CG GLU A 464 331.325 34.293 118.601 1.00 93.15 ATOM 27 CD GLU A 464 331.679 32.824 118.379 1.00 99.06 ATOM 28 OE1 GLU A 464 331.647 32.375 117.215 1.00 93.10 ATOM 29 OE2 GLU A 464 331.971 32.105 119.360 1.00106.47 ATOM 30 N GLN A 465 335.101 35.343 120.869 1.00 71.91 ATOM 31 CA GLN A 465 336.515 35.109 121.131 1.00 81.24 ATOM 32 C GLN A 465 336.780 35.353 122.608 1.00 67.43 ATOM 33 O GLN A 465 336.649 36.487 123.083 1.00 58.92 ATOM 34 CB GLN A 465 337.404 36.021 120.286 1.00 96.41 ATOM 35 CG GLN A 465 336.882 36.349 118.902 1.00112.45 ATOM 36 CD GLN A 465 338.001 36.693 117.939 1.00109.13 ATOM 37 OE1 GLN A 465 339.175 36.456 118.226 1.00 99.81 ATOM 38 NE2 GLN A 465 337.643 37.244 116.786 1.00108.39 ATOM 39 N GLY A 466 337.231 34.313 123.307 1.00 82.82 ATOM 40 CA GLY A 466 337.483 34.447 124.726 1.00 78.49 ATOM 41 C GLY A 466 338.512 35.522 125.011 1.00 74.46 ATOM 42 O GLY A 466 339.384 35.819 124.193 1.00 73.14 ATOM 43 N LYS A 467 338.389 36.124 126.184 1.00 68.95 ATOM 44 CA LYS A 467 339.346 37.093 126.688 1.00 60.38 ATOM 45 C LYS A 467 340.323 36.416 127.632 1.00 59.51 ATOM 46 O LYS A 467 339.987 35.434 128.293 1.00 66.30 ATOM 47 CB LYS A 467 338.620 38.218 127.419 1.00 56.30 ATOM 48 CG LYS A 467 337.293 38.554 126.786 1.00 69.80 ATOM 49 CD LYS A 467 336.924 39.997 127.017 1.00 77.88 ATOM 50 CE LYS A 467 335.926 40.460 125.981 1.00 78.99 ATOM 51 NZ LYS A 467 336.520 40.302 124.627 1.00 81.91 ATOM 52 N LYS A 468 341.525 36.970 127.721 1.00 52.26 ATOM 53 CA LYS A 468 342.539 36.435 128.614 1.00 39.91 ATOM 54 C LYS A 468 342.467 37.129 129.962 1.00 42.69 ATOM 55 O LYS A 468 342.116 38.309 130.063 1.00 44.02 ATOM 56 CB LYS A 468 343.947 36.621 128.036 1.00 52.26 ATOM 57 CG LYS A 468 345.032 35.713 128.642 1.00 61.83 ATOM 58 CD LYS A 468 346.437 36.164 128.218 1.00 64.76 ATOM 59 CE LYS A 468 347.251 36.752 129.372 1.00 63.25 ATOM 60 NZ LYS A 468 348.059 35.736 130.111 1.00 77.88 ATOM 61 N CYS A 469 342.784 36.373 131.006 1.00 58.22 ATOM 62 CA CYS A 469 343.042 37.001 132.287 1.00 55.08 ATOM 63 C CYS A 469 344.173 38.003 132.135 1.00 53.51 ATOM 64 O CYS A 469 345.107 37.803 131.354 1.00 42.58 ATOM 65 CB CYS A 469 343.406 35.974 133.339 1.00 56.15 ATOM 66 SG CYS A 469 343.846 36.790 134.865 1.00 50.96 ATOM 67 N ARG A 470 344.079 39.094 132.885 1.00 47.73 ATOM 68 CA ARG A 470 345.088 40.136 132.769 1.00 47.78 ATOM 69 C ARG A 470 346.439 39.652 133.291 1.00 55.50 ATOM 70 O ARG A 470 347.494 40.042 132.776 1.00 61.78 ATOM 71 CB ARG A 470 344.602 41.385 133.497 1.00 48.36 ATOM 72 CG ARG A 470 345.079 42.638 132.835 1.00 79.67 ATOM 73 CD ARG A 470 344.696 43.875 133.595 1.00 94.82 ATOM 74 NE ARG A 470 345.918 44.605 133.892 1.00111.33 ATOM 75 CZ ARG A 470 345.982 45.828 134.401 1.00117.40 ATOM 76 NH1 ARG A 470 344.879 46.507 134.689 1.00121.85 ATOM 77 NH2 ARG A 470 347.169 46.373 134.619 1.00112.02 ATOM 78 N TYR A 471 346.420 38.798 134.315 1.00 55.60 ATOM 79 CA TYR A 471 347.608 38.269 134.977 1.00 49.21 ATOM 80 C TYR A 471 347.874 36.815 134.633 1.00 52.75 ATOM 81 O TYR A 471 349.001 36.333 134.812 1.00 83.48 ATOM 82 CB TYR A 471 347.448 38.412 136.490 1.00 46.65 ATOM 83 CG TYR A 471 347.048 39.809 136.786 1.00 57.69 ATOM 84 CD1 TYR A 471 345.790 40.092 137.286 1.00 51.85 ATOM 85 CD2 TYR A 471 347.871 40.860 136.437 1.00 79.04 ATOM 86 CE1 TYR A 471 345.399 41.397 137.520 1.00 53.66 ATOM 87 CE2 TYR A 471 347.502 42.148 136.665 1.00 81.21 ATOM 88 CZ TYR A 471 346.269 42.424 137.204 1.00 62.88 ATOM 89 OH TYR A 471 345.956 43.749 137.405 1.00 60.88 ATOM 90 N CYS A 472 346.853 36.122 134.159 1.00 59.61 ATOM 91 CA CYS A 472 346.824 34.682 134.108 1.00 50.27 ATOM 92 C CYS A 472 346.571 34.275 132.663 1.00 61.41 ATOM 93 O CYS A 472 346.232 35.112 131.827 1.00 71.43 ATOM 94 CB CYS A 472 345.743 34.249 135.098 1.00 48.16 ATOM 95 SG CYS A 472 345.208 32.619 135.198 1.00 60.27 ATOM 96 N ASP A 473 346.723 32.991 132.359 1.00 64.03 ATOM 97 CA ASP A 473 346.467 32.546 130.995 1.00 62.20 ATOM 98 C ASP A 473 345.061 32.006 130.796 1.00 56.69 ATOM 99 O ASP A 473 344.742 31.533 129.701 1.00 61.13 ATOM 100 CB ASP A 473 347.505 31.503 130.564 1.00 73.88 ATOM 101 CG ASP A 473 348.882 32.107 130.350 1.00 90.37 ATOM 102 OD1 ASP A 473 349.863 31.333 130.303 1.00 98.27 ATOM 103 OD2 ASP A 473 348.991 33.349 130.241 1.00 98.55 ATOM 104 N ALA A 474 344.224 32.060 131.828 1.00 44.64 ATOM 105 CA ALA A 474 342.833 31.659 131.695 1.00 41.18 ATOM 106 C ALA A 474 342.117 32.520 130.661 1.00 43.74 ATOM 107 O ALA A 474 342.276 33.743 130.627 1.00 46.79 ATOM 108 CB ALA A 474 342.127 31.762 133.049 1.00 43.95 ATOM 109 N VAL A 475 341.330 31.870 129.809 1.00 41.38 ATOM 110 CA VAL A 475 340.429 32.568 128.905 1.00 48.02 ATOM 111 C VAL A 475 338.997 32.356 129.377 1.00 55.55 ATOM 112 O VAL A 475 338.686 31.420 130.119 1.00 50.08 ATOM 113 CB VAL A 475 340.601 32.131 127.437 1.00 39.63 ATOM 114 CG1 VAL A 475 341.932 32.631 126.899 1.00 33.14 ATOM 115 CG2 VAL A 475 340.514 30.626 127.326 1.00 54.66 ATOM 116 N PHE A 476 338.117 33.253 128.940 1.00 44.80 ATOM 117 CA PHE A 476 336.722 33.232 129.352 1.00 52.61 ATOM 118 C PHE A 476 335.849 33.723 128.213 1.00 64.31 ATOM 119 O PHE A 476 336.186 34.698 127.536 1.00 80.41 ATOM 120 CB PHE A 476 336.488 34.099 130.594 1.00 59.12 ATOM 121 CG PHE A 476 337.221 33.615 131.796 1.00 54.34 ATOM 122 CD1 PHE A 476 338.516 34.028 132.053 1.00 59.62 ATOM 123 CD2 PHE A 476 336.631 32.699 132.644 1.00 60.48 ATOM 124 CE1 PHE A 476 339.192 33.557 133.149 1.00 74.09 ATOM 125 CE2 PHE A 476 337.302 32.225 133.740 1.00 59.42 ATOM 126 CZ PHE A 476 338.586 32.645 133.987 1.00 66.35 ATOM 127 N HIS A 477 334.724 33.042 128.013 1.00 62.00 ATOM 128 CA HIS A 477 333.710 33.484 127.070 1.00 64.31 ATOM 129 C HIS A 477 332.523 34.116 127.788 1.00 64.38 ATOM 130 O HIS A 477 331.427 34.196 127.224 1.00 76.06 ATOM 131 CB HIS A 477 333.277 32.313 126.188 1.00 54.85 ATOM 132 CG HIS A 477 334.422 31.632 125.501 1.00 56.82 ATOM 133 ND1 HIS A 477 335.108 30.581 126.069 1.00 56.03 ATOM 134 CD2 HIS A 477 335.020 31.871 124.309 1.00 60.75 ATOM 135 CE1 HIS A 477 336.068 30.190 125.250 1.00 66.70 ATOM 136 NE2 HIS A 477 336.037 30.957 124.176 1.00 73.40 ATOM 137 N GLU A 478 332.727 34.564 129.029 1.00 56.15 ATOM 138 CA GLU A 478 331.721 35.298 129.786 1.00 58.79 ATOM 139 C GLU A 478 332.408 36.366 130.629 1.00 54.78 ATOM 140 O GLU A 478 333.341 36.069 131.384 1.00 60.65 ATOM 141 CB GLU A 478 330.887 34.377 130.684 1.00 50.67 ATOM 142 CG GLU A 478 329.923 35.146 131.575 1.00 56.92 ATOM 143 CD GLU A 478 329.069 34.252 132.449 1.00 66.24 ATOM 144 OE1 GLU A 478 329.576 33.785 133.489 1.00 60.88 ATOM 145 OE2 GLU A 478 327.893 34.013 132.096 1.00 83.57 ATOM 146 N ARG A 479 331.937 37.606 130.480 1.00 54.44 ATOM 147 CA ARG A 479 332.481 38.753 131.205 1.00 38.93 ATOM 148 C ARG A 479 332.588 38.505 132.708 1.00 41.26 ATOM 149 O ARG A 479 333.673 38.637 133.298 1.00 70.74 ATOM 150 CB ARG A 479 331.615 39.983 130.930 1.00 47.54 ATOM 151 CG ARG A 479 331.967 41.177 131.788 1.00 49.23 ATOM 152 CD ARG A 479 332.763 42.214 131.025 1.00 54.40 ATOM 153 NE ARG A 479 332.919 43.432 131.812 1.00 72.00 ATOM 154 CZ ARG A 479 333.583 44.509 131.405 1.00 86.98 ATOM 155 NH1 ARG A 479 334.163 44.526 130.212 1.00 86.04 ATOM 156 NH2 ARG A 479 333.669 45.570 132.194 1.00 88.56 ATOM 157 N TYR A 480 331.444 38.258 133.355 1.00 38.44 ATOM 158 CA TYR A 480 331.411 38.071 134.802 1.00 47.25 ATOM 159 C TYR A 480 332.406 37.008 135.240 1.00 60.79 ATOM 160 O TYR A 480 333.149 37.197 136.209 1.00 75.46 ATOM 161 CB TYR A 480 329.997 37.701 135.255 1.00 70.55 ATOM 162 CG TYR A 480 329.916 37.269 136.704 1.00 72.56 ATOM 163 CD1 TYR A 480 329.779 38.201 137.724 1.00 66.97 ATOM 164 CD2 TYR A 480 329.980 35.924 137.051 1.00 70.08 ATOM 165 CE1 TYR A 480 329.711 37.807 139.048 1.00 70.58 ATOM 166 CE2 TYR A 480 329.911 35.521 138.370 1.00 61.78 ATOM 167 CZ TYR A 480 329.775 36.465 139.364 1.00 73.11 ATOM 168 OH TYR A 480 329.704 36.068 140.679 1.00 71.68 ATOM 169 N ALA A 481 332.402 35.860 134.558 1.00 53.87 ATOM 170 CA ALA A 481 333.370 34.815 134.866 1.00 53.69 ATOM 171 C ALA A 481 334.793 35.354 134.804 1.00 53.49 ATOM 172 O ALA A 481 335.617 35.065 135.682 1.00 63.19 ATOM 173 CB ALA A 481 333.193 33.636 133.908 1.00 39.54 ATOM 174 N LEU A 482 335.083 36.183 133.796 1.00 40.89 ATOM 175 CA LEU A 482 336.426 36.743 133.650 1.00 59.19 ATOM 176 C LEU A 482 336.818 37.583 134.863 1.00 66.70 ATOM 177 O LEU A 482 337.851 37.337 135.495 1.00 69.50 ATOM 178 CB LEU A 482 336.522 37.576 132.372 1.00 46.65 ATOM 179 CG LEU A 482 337.772 38.450 132.221 1.00 49.86 ATOM 180 CD1 LEU A 482 339.077 37.667 132.432 1.00 36.46 ATOM 181 CD2 LEU A 482 337.760 39.116 130.858 1.00 58.20 ATOM 182 N ILE A 483 336.047 38.634 135.152 1.00 50.44 ATOM 183 CA ILE A 483 336.432 39.528 136.250 1.00 52.85 ATOM 184 C ILE A 483 336.478 38.758 137.571 1.00 61.17 ATOM 185 O ILE A 483 337.414 38.910 138.381 1.00 89.82 ATOM 186 CB ILE A 483 335.508 40.770 136.299 1.00 38.62 ATOM 187 CG1 ILE A 483 334.080 40.460 136.765 1.00 67.77 ATOM 188 CG2 ILE A 483 335.456 41.459 134.940 1.00 29.12 ATOM 189 CD1 ILE A 483 333.833 40.705 138.249 1.00 83.99 ATOM 190 N GLN A 484 335.497 37.877 137.784 1.00 56.38 ATOM 191 CA GLN A 484 335.469 37.048 138.978 1.00 56.14 ATOM 192 C GLN A 484 336.710 36.174 139.074 1.00 57.46 ATOM 193 O GLN A 484 337.096 35.751 140.169 1.00 66.02 ATOM 194 CB GLN A 484 334.203 36.196 138.959 1.00 70.72 ATOM 195 CG GLN A 484 333.753 35.701 140.311 1.00 81.24 ATOM 196 CD GLN A 484 333.073 36.793 141.126 1.00 83.38 ATOM 197 OE1 GLN A 484 333.024 37.960 140.724 1.00 82.15 ATOM 198 NE2 GLN A 484 332.553 36.417 142.285 1.00 78.36 ATOM 199 N HIS A 485 337.328 35.855 137.937 1.00 55.13 ATOM 200 CA HIS A 485 338.581 35.116 137.989 1.00 69.00 ATOM 201 C HIS A 485 339.747 36.038 138.299 1.00 81.67 ATOM 202 O HIS A 485 340.636 35.682 139.080 1.00 70.75 ATOM 203 CB HIS A 485 338.835 34.405 136.672 1.00 69.65 ATOM 204 CG HIS A 485 340.249 33.952 136.505 1.00 61.01 ATOM 205 ND1 HIS A 485 340.682 32.710 136.918 1.00 70.03 ATOM 206 CD2 HIS A 485 341.335 34.586 135.998 1.00 62.52 ATOM 207 CE1 HIS A 485 341.971 32.596 136.655 1.00 60.97 ATOM 208 NE2 HIS A 485 342.392 33.718 136.095 1.00 60.13 ATOM 209 N GLN A 486 339.754 37.230 137.696 1.00 88.15 ATOM 210 CA GLN A 486 340.759 38.230 138.040 1.00 62.79 ATOM 211 C GLN A 486 340.732 38.545 139.527 1.00 76.67 ATOM 212 O GLN A 486 341.629 39.233 140.029 1.00 77.58 ATOM 213 CB GLN A 486 340.539 39.502 137.225 1.00 54.97 ATOM 214 CG GLN A 486 340.813 39.322 135.739 1.00 61.53 ATOM 215 CD GLN A 486 340.549 40.582 134.936 1.00 64.33 ATOM 216 OE1 GLN A 486 339.856 41.492 135.394 1.00 74.94 ATOM 217 NE2 GLN A 486 341.096 40.638 133.727 1.00 46.49 ATOM 218 N LYS A 487 339.724 38.030 140.233 1.00 74.66 ATOM 219 CA LYS A 487 339.725 38.075 141.694 1.00 82.14 ATOM 220 C LYS A 487 340.823 37.196 142.297 1.00 78.62 ATOM 221 O LYS A 487 341.559 37.645 143.184 1.00 68.32 ATOM 222 CB LYS A 487 338.379 37.608 142.227 1.00 89.74 ATOM 223 CG LYS A 487 338.062 38.010 143.652 1.00 96.42 ATOM 224 CD LYS A 487 337.449 39.393 143.702 1.00 99.44 ATOM 225 CE LYS A 487 336.970 39.720 145.106 1.00 98.95 ATOM 226 NZ LYS A 487 336.270 41.033 145.152 1.00 94.60 ATOM 227 N SER A 488 340.956 35.945 141.832 1.00 70.90 ATOM 228 CA SER A 488 341.935 34.999 142.380 1.00 66.26 ATOM 229 C SER A 488 343.368 35.499 142.237 1.00 71.35 ATOM 230 O SER A 488 344.312 34.864 142.725 1.00 61.28 ATOM 231 CB SER A 488 341.793 33.611 141.738 1.00 55.91 ATOM 232 OG SER A 488 342.430 33.507 140.477 1.00 51.20 ATOM 233 N HIS A 489 343.489 36.683 141.656 1.00 72.06 ATOM 234 CA HIS A 489 344.754 37.364 141.560 1.00 74.16 ATOM 235 C HIS A 489 344.893 38.594 142.462 1.00 79.66 ATOM 236 O HIS A 489 345.866 39.315 142.362 1.00 99.38 ATOM 237 CB HIS A 489 345.038 37.697 140.103 1.00 65.48 ATOM 238 CG HIS A 489 345.105 36.492 139.224 1.00 67.26 ATOM 239 ND1 HIS A 489 346.021 35.489 139.425 1.00 77.02 ATOM 240 CD2 HIS A 489 344.368 36.119 138.153 1.00 77.84 ATOM 241 CE1 HIS A 489 345.851 34.549 138.515 1.00 85.14 ATOM 242 NE2 HIS A 489 344.850 34.905 137.733 1.00 73.25 ATOM 243 N LYS A 490 343.921 38.866 143.320 1.00 73.77 ATOM 244 CA LYS A 490 344.104 39.896 144.343 1.00 89.39 ATOM 245 C LYS A 490 343.373 39.568 145.650 1.00100.70 ATOM 246 O LYS A 490 342.156 39.488 145.630 1.00105.18 ATOM 247 CB LYS A 490 343.630 41.250 143.788 1.00 89.45 ATOM 248 CG LYS A 490 343.164 42.287 144.808 1.00101.78 ATOM 249 CD LYS A 490 344.098 43.500 144.885 1.00109.90 ATOM 250 CE LYS A 490 343.366 44.826 144.673 1.00117.40 ATOM 251 NZ LYS A 490 344.044 46.038 145.245 1.00121.55 ATOM 252 ZN ZN A 603 344.108 34.768 135.880 1.00 23.13 TER