HEADER DNA BINDING PROTEIN/DNA 31-DEC-69 5YEL TITLE Crystal structure of CTCF ZFs6-11-gb7CSE COMPND MOL_ID: 2; COMPND 2 MOLECULE: Transcriptional repressor CTCF; COMPND 3 CHAIN: A, B; COMPND 4 MUTATION: YES; COMPND 5 FRAGMENT: UNP residues ; COMPND 6 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.96 ANGSTORMS REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 29 DBREF 5YEL A 405 580 UNP P49711 CTCF_HUMAN 405 580 SEQRES 1 A 29 ASN VAL ALA LYS PHE HIS CYS PRO HIS CYS ASP THR VAL SEQRES 2 A 29 ILE ALA ARG LYS SER ASP LEU GLY VAL HIS LEU ARG LYS SEQRES 3 A 29 GLN HIS SER ATOM 1 N VAL A 434 311.747 49.278 148.002 1.00104.85 ATOM 2 CA VAL A 434 312.129 47.964 148.503 1.00101.43 ATOM 3 C VAL A 434 311.715 46.889 147.513 1.00 97.49 ATOM 4 O VAL A 434 310.572 46.432 147.529 1.00102.30 ATOM 5 CB VAL A 434 311.500 47.708 149.862 1.00 92.67 ATOM 6 N ALA A 435 312.639 46.467 146.655 1.00 92.12 ATOM 7 CA ALA A 435 312.272 45.524 145.610 1.00 78.68 ATOM 8 C ALA A 435 313.470 44.664 145.236 1.00 78.91 ATOM 9 O ALA A 435 314.576 44.816 145.763 1.00 68.91 ATOM 10 CB ALA A 435 311.719 46.253 144.381 1.00 50.60 ATOM 11 N LYS A 436 313.209 43.742 144.315 1.00100.10 ATOM 12 CA LYS A 436 314.187 42.807 143.776 1.00 82.21 ATOM 13 C LYS A 436 315.051 43.599 142.767 1.00 69.71 ATOM 14 O LYS A 436 315.102 44.828 142.862 1.00 92.03 ATOM 15 CB LYS A 436 313.410 41.585 143.284 1.00 74.25 ATOM 16 N PHE A 437 315.763 42.992 141.796 1.00 45.24 ATOM 17 CA PHE A 437 315.785 41.584 141.382 1.00 67.35 ATOM 18 C PHE A 437 317.159 40.965 141.507 1.00 75.16 ATOM 19 O PHE A 437 318.174 41.642 141.360 1.00 82.21 ATOM 20 CB PHE A 437 315.302 41.454 139.940 1.00 75.55 ATOM 21 CG PHE A 437 314.072 42.252 139.644 1.00 84.80 ATOM 22 CD1 PHE A 437 314.157 43.598 139.335 1.00 81.07 ATOM 23 CD2 PHE A 437 312.826 41.651 139.665 1.00 90.16 ATOM 24 CE1 PHE A 437 313.028 44.335 139.077 1.00 82.43 ATOM 25 CE2 PHE A 437 311.691 42.383 139.394 1.00 97.66 ATOM 26 CZ PHE A 437 311.792 43.726 139.095 1.00 92.45 ATOM 27 N HIS A 438 317.188 39.663 141.763 1.00 59.11 ATOM 28 CA HIS A 438 318.437 38.931 141.927 1.00 59.66 ATOM 29 C HIS A 438 318.813 38.301 140.592 1.00 64.83 ATOM 30 O HIS A 438 318.009 37.571 140.000 1.00 75.70 ATOM 31 CB HIS A 438 318.289 37.878 143.023 1.00 82.77 ATOM 32 CG HIS A 438 318.050 38.465 144.379 1.00 98.24 ATOM 33 ND1 HIS A 438 316.818 38.941 144.773 1.00105.60 ATOM 34 CD2 HIS A 438 318.882 38.660 145.429 1.00 98.61 ATOM 35 CE1 HIS A 438 316.901 39.403 146.008 1.00101.06 ATOM 36 NE2 HIS A 438 318.143 39.243 146.429 1.00104.44 ATOM 37 N CYS A 439 320.012 38.605 140.109 1.00 69.50 ATOM 38 CA CYS A 439 320.463 38.021 138.856 1.00 72.15 ATOM 39 C CYS A 439 320.470 36.504 138.971 1.00 73.28 ATOM 40 O CYS A 439 320.959 35.962 139.976 1.00 75.59 ATOM 41 CB CYS A 439 321.854 38.515 138.464 1.00 73.05 ATOM 42 SG CYS A 439 322.402 37.811 136.884 1.00 74.60 ATOM 43 N PRO A 440 319.902 35.780 138.009 1.00 63.64 ATOM 44 CA PRO A 440 319.875 34.319 138.124 1.00 60.24 ATOM 45 C PRO A 440 321.258 33.701 138.198 1.00 68.22 ATOM 46 O PRO A 440 321.413 32.623 138.783 1.00 91.10 ATOM 47 CB PRO A 440 319.133 33.873 136.857 1.00 60.77 ATOM 48 CG PRO A 440 319.160 35.037 135.933 1.00 55.79 ATOM 49 CD PRO A 440 319.254 36.265 136.776 1.00 46.53 ATOM 50 N HIS A 441 322.273 34.346 137.625 1.00 52.03 ATOM 51 CA HIS A 441 323.597 33.743 137.565 1.00 45.87 ATOM 52 C HIS A 441 324.590 34.347 138.554 1.00 59.89 ATOM 53 O HIS A 441 325.238 33.594 139.283 1.00 73.36 ATOM 54 CB HIS A 441 324.120 33.810 136.129 1.00 46.66 ATOM 55 CG HIS A 441 323.049 33.599 135.102 1.00 65.55 ATOM 56 ND1 HIS A 441 322.475 32.368 134.864 1.00 64.50 ATOM 57 CD2 HIS A 441 322.486 34.453 134.214 1.00 74.80 ATOM 58 CE1 HIS A 441 321.573 32.482 133.905 1.00 52.83 ATOM 59 NE2 HIS A 441 321.566 33.735 133.487 1.00 65.55 ATOM 60 N CYS A 442 324.747 35.672 138.599 1.00 64.56 ATOM 61 CA CYS A 442 325.570 36.231 139.662 1.00 50.60 ATOM 62 C CYS A 442 324.692 36.531 140.873 1.00 57.46 ATOM 63 O CYS A 442 323.464 36.462 140.817 1.00 72.57 ATOM 64 CB CYS A 442 326.307 37.500 139.229 1.00 68.16 ATOM 65 SG CYS A 442 325.265 38.878 138.741 1.00 78.08 ATOM 66 N ASP A 443 325.344 36.869 141.981 1.00 81.58 ATOM 67 CA ASP A 443 324.650 37.145 143.231 1.00100.61 ATOM 68 C ASP A 443 324.195 38.589 143.374 1.00 92.76 ATOM 69 O ASP A 443 323.703 38.961 144.443 1.00 97.22 ATOM 70 CB ASP A 443 325.534 36.746 144.424 1.00112.59 ATOM 71 CG ASP A 443 326.771 37.628 144.585 1.00120.02 ATOM 72 OD1 ASP A 443 326.949 38.605 143.825 1.00119.77 ATOM 73 OD2 ASP A 443 327.583 37.329 145.485 1.00124.04 ATOM 74 N THR A 444 324.331 39.402 142.333 1.00 75.80 ATOM 75 CA THR A 444 324.000 40.812 142.454 1.00 73.40 ATOM 76 C THR A 444 322.490 41.036 142.467 1.00 78.51 ATOM 77 O THR A 444 321.696 40.185 142.055 1.00 93.01 ATOM 78 CB THR A 444 324.620 41.614 141.311 1.00 75.35 ATOM 79 OG1 THR A 444 324.826 40.756 140.185 1.00 72.44 ATOM 80 CG2 THR A 444 325.946 42.219 141.735 1.00 83.79 ATOM 81 N VAL A 445 322.106 42.212 142.961 1.00 74.86 ATOM 82 CA VAL A 445 320.726 42.672 142.977 1.00 86.57 ATOM 83 C VAL A 445 320.651 44.018 142.273 1.00 82.78 ATOM 84 O VAL A 445 321.530 44.869 142.445 1.00 74.97 ATOM 85 CB VAL A 445 320.184 42.792 144.402 1.00 81.58 ATOM 86 N ILE A 446 319.601 44.208 141.480 1.00 73.09 ATOM 87 CA ILE A 446 319.429 45.415 140.688 1.00 66.77 ATOM 88 C ILE A 446 318.126 46.079 141.101 1.00 67.61 ATOM 89 O ILE A 446 317.125 45.396 141.337 1.00 63.55 ATOM 90 CB ILE A 446 319.395 45.106 139.179 1.00 63.04 ATOM 91 CG1 ILE A 446 320.569 44.220 138.771 1.00 64.62 ATOM 92 CG2 ILE A 446 319.466 46.388 138.416 1.00 39.60 ATOM 93 CD1 ILE A 446 321.823 44.976 138.463 1.00 63.82 ATOM 94 N ALA A 447 318.133 47.410 141.169 1.00 66.12 ATOM 95 CA ALA A 447 316.926 48.174 141.460 1.00 77.33 ATOM 96 C ALA A 447 315.820 47.865 140.453 1.00 75.39 ATOM 97 O ALA A 447 314.765 47.341 140.823 1.00 77.12 ATOM 98 CB ALA A 447 317.233 49.673 141.483 1.00 80.23 ATOM 99 N ARG A 448 316.050 48.189 139.181 1.00 72.13 ATOM 100 CA ARG A 448 315.041 48.082 138.135 1.00 72.08 ATOM 101 C ARG A 448 315.292 46.879 137.222 1.00 71.80 ATOM 102 O ARG A 448 316.437 46.515 136.927 1.00 83.50 ATOM 103 CB ARG A 448 315.006 49.371 137.304 1.00 81.72 ATOM 104 CG ARG A 448 314.808 50.663 138.111 1.00 74.96 ATOM 105 CD ARG A 448 315.286 51.885 137.320 1.00 93.64 ATOM 106 NE ARG A 448 314.781 53.151 137.850 1.00112.98 ATOM 107 CZ ARG A 448 313.704 53.778 137.384 1.00 99.68 ATOM 108 NH1 ARG A 448 313.015 53.256 136.378 1.00 84.44 ATOM 109 NH2 ARG A 448 313.314 54.928 137.920 1.00103.19 ATOM 110 N LYS A 449 314.191 46.260 136.779 1.00 62.65 ATOM 111 CA LYS A 449 314.267 45.046 135.965 1.00 44.86 ATOM 112 C LYS A 449 315.025 45.287 134.664 1.00 43.17 ATOM 113 O LYS A 449 315.829 44.455 134.234 1.00 45.74 ATOM 114 CB LYS A 449 312.860 44.525 135.674 1.00 54.20 ATOM 115 CG LYS A 449 312.847 43.218 134.918 1.00 59.65 ATOM 116 CD LYS A 449 311.485 42.887 134.340 1.00 59.66 ATOM 117 CE LYS A 449 311.152 41.431 134.609 1.00 48.77 ATOM 118 NZ LYS A 449 310.349 40.853 133.502 1.00 40.89 ATOM 119 N SER A 450 314.702 46.372 133.967 1.00 49.24 ATOM 120 CA SER A 450 315.408 46.684 132.731 1.00 51.83 ATOM 121 C SER A 450 316.909 46.811 132.971 1.00 60.24 ATOM 122 O SER A 450 317.731 46.454 132.112 1.00 53.21 ATOM 123 CB SER A 450 314.831 47.956 132.141 1.00 56.04 ATOM 124 OG SER A 450 314.462 48.865 133.162 1.00 69.23 ATOM 125 N ASP A 451 317.286 47.337 134.136 1.00 74.84 ATOM 126 CA ASP A 451 318.699 47.379 134.478 1.00 58.93 ATOM 127 C ASP A 451 319.252 45.979 134.701 1.00 55.99 ATOM 128 O ASP A 451 320.414 45.722 134.383 1.00 59.26 ATOM 129 CB ASP A 451 318.925 48.238 135.715 1.00 63.80 ATOM 130 CG ASP A 451 318.727 49.703 135.449 1.00 63.79 ATOM 131 OD1 ASP A 451 317.918 50.314 136.175 1.00 61.23 ATOM 132 OD2 ASP A 451 319.347 50.235 134.504 1.00 60.10 ATOM 133 N LEU A 452 318.449 45.058 135.242 1.00 43.05 ATOM 134 CA LEU A 452 318.856 43.652 135.201 1.00 48.97 ATOM 135 C LEU A 452 319.060 43.183 133.762 1.00 46.44 ATOM 136 O LEU A 452 319.977 42.400 133.473 1.00 39.76 ATOM 137 CB LEU A 452 317.824 42.770 135.906 1.00 42.31 ATOM 138 CG LEU A 452 318.110 41.265 136.010 1.00 31.42 ATOM 139 CD1 LEU A 452 319.593 40.950 136.214 1.00 47.21 ATOM 140 CD2 LEU A 452 317.282 40.652 137.120 1.00 43.98 ATOM 141 N GLY A 453 318.186 43.623 132.857 1.00 29.90 ATOM 142 CA GLY A 453 318.361 43.301 131.449 1.00 30.87 ATOM 143 C GLY A 453 319.720 43.711 130.917 1.00 42.06 ATOM 144 O GLY A 453 320.421 42.913 130.284 1.00 36.05 ATOM 145 N VAL A 454 320.146 44.935 131.233 1.00 59.58 ATOM 146 CA VAL A 454 321.459 45.370 130.757 1.00 71.40 ATOM 147 C VAL A 454 322.553 44.606 131.493 1.00 54.13 ATOM 148 O VAL A 454 323.580 44.233 130.902 1.00 50.08 ATOM 149 CB VAL A 454 321.633 46.900 130.879 1.00 79.42 ATOM 150 CG1 VAL A 454 321.831 47.352 132.318 1.00 83.83 ATOM 151 CG2 VAL A 454 322.799 47.365 130.022 1.00 78.38 ATOM 152 N HIS A 455 322.338 44.334 132.783 1.00 42.52 ATOM 153 CA HIS A 455 323.337 43.618 133.559 1.00 46.72 ATOM 154 C HIS A 455 323.655 42.283 132.922 1.00 50.02 ATOM 155 O HIS A 455 324.819 41.906 132.812 1.00 66.07 ATOM 156 CB HIS A 455 322.872 43.379 134.998 1.00 51.73 ATOM 157 CG HIS A 455 323.599 42.251 135.670 1.00 61.30 ATOM 158 ND1 HIS A 455 323.428 40.932 135.298 1.00 65.15 ATOM 159 CD2 HIS A 455 324.502 42.239 136.680 1.00 61.71 ATOM 160 CE1 HIS A 455 324.209 40.167 136.034 1.00 57.74 ATOM 161 NE2 HIS A 455 324.862 40.933 136.891 1.00 66.54 ATOM 162 N LEU A 456 322.638 41.520 132.548 1.00 54.46 ATOM 163 CA LEU A 456 323.004 40.202 132.057 1.00 56.88 ATOM 164 C LEU A 456 323.237 40.171 130.554 1.00 47.54 ATOM 165 O LEU A 456 324.013 39.316 130.108 1.00 50.86 ATOM 166 CB LEU A 456 321.963 39.146 132.489 1.00 57.46 ATOM 167 CG LEU A 456 320.527 38.899 131.998 1.00 45.19 ATOM 168 CD1 LEU A 456 319.677 38.335 133.139 1.00 44.64 ATOM 169 CD2 LEU A 456 319.864 40.109 131.395 1.00 51.15 ATOM 170 N ARG A 457 322.816 41.209 129.814 1.00 42.81 ATOM 171 CA ARG A 457 323.291 41.370 128.444 1.00 53.12 ATOM 172 C ARG A 457 324.735 41.832 128.374 1.00 65.10 ATOM 173 O ARG A 457 325.326 41.805 127.289 1.00 64.38 ATOM 174 CB ARG A 457 322.435 42.387 127.680 1.00 37.17 ATOM 175 CG ARG A 457 321.373 41.808 126.754 1.00 47.28 ATOM 176 CD ARG A 457 320.103 42.666 126.720 1.00 52.34 ATOM 177 NE ARG A 457 320.375 44.066 126.393 1.00 43.94 ATOM 178 CZ ARG A 457 319.885 45.101 127.070 1.00 45.30 ATOM 179 NH1 ARG A 457 319.105 44.900 128.124 1.00 46.13 ATOM 180 NH2 ARG A 457 320.184 46.340 126.703 1.00 40.29 ATOM 181 N LYS A 458 325.316 42.241 129.491 1.00 60.68 ATOM 182 CA LYS A 458 326.710 42.661 129.488 1.00 61.83 ATOM 183 C LYS A 458 327.612 41.733 130.285 1.00 54.00 ATOM 184 O LYS A 458 328.738 41.459 129.859 1.00 67.98 ATOM 185 CB LYS A 458 326.813 44.085 130.037 1.00 69.78 ATOM 186 CG LYS A 458 328.184 44.495 130.516 1.00 80.38 ATOM 187 CD LYS A 458 328.067 45.805 131.256 1.00 94.57 ATOM 188 CE LYS A 458 326.932 45.737 132.273 1.00 91.18 ATOM 189 NZ LYS A 458 326.412 47.076 132.659 1.00 92.16 ATOM 190 N GLN A 459 327.139 41.220 131.424 1.00 30.84 ATOM 191 CA GLN A 459 327.916 40.291 132.232 1.00 43.20 ATOM 192 C GLN A 459 327.787 38.853 131.758 1.00 47.28 ATOM 193 O GLN A 459 328.741 38.084 131.896 1.00 46.90 ATOM 194 CB GLN A 459 327.485 40.358 133.702 1.00 51.84 ATOM 195 CG GLN A 459 327.444 41.739 134.324 1.00 67.04 ATOM 196 CD GLN A 459 328.747 42.484 134.201 1.00 75.26 ATOM 197 OE1 GLN A 459 328.809 43.544 133.587 1.00 63.94 ATOM 198 NE2 GLN A 459 329.801 41.936 134.796 1.00 86.49 ATOM 199 N HIS A 460 326.638 38.453 131.207 1.00 55.02 ATOM 200 CA HIS A 460 326.419 37.024 131.013 1.00 55.64 ATOM 201 C HIS A 460 326.143 36.662 129.559 1.00 46.40 ATOM 202 O HIS A 460 325.643 35.566 129.289 1.00 40.09 ATOM 203 CB HIS A 460 325.315 36.516 131.946 1.00 52.67 ATOM 204 CG HIS A 460 325.594 36.840 133.381 1.00 56.48 ATOM 205 ND1 HIS A 460 326.416 36.065 134.173 1.00 68.43 ATOM 206 CD2 HIS A 460 325.168 37.858 134.168 1.00 77.56 ATOM 207 CE1 HIS A 460 326.489 36.596 135.380 1.00 80.14 ATOM 208 NE2 HIS A 460 325.736 37.683 135.407 1.00 83.50 ATOM 209 N SER A 461 326.456 37.551 128.615 1.00 53.31 ATOM 210 CA SER A 461 326.384 37.209 127.201 1.00 47.26 ATOM 211 C SER A 461 327.660 36.497 126.766 1.00 60.98 ATOM 212 O SER A 461 328.767 36.882 127.153 1.00 83.38 ATOM 213 CB SER A 461 326.172 38.456 126.344 1.00 58.20 ATOM 214 OG SER A 461 326.072 39.620 127.133 1.00 64.94 ATOM 215 ZN ZN A 602 324.528 38.374 136.933 1.00 9.97 TER