HEADER DNA BINDING PROTEIN 31-DEC-69 5ZB8 TITLE Crystal structure of the novel lesion-specific endonuclease PfuEndoQ TITLE 2 from Pyrococcus furiosus COMPND MOL_ID: 1; COMPND 2 MOLECULE: PfuEndoQ; COMPND 3 CHAIN: A, B, C, D, E; COMPND 4 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.50 ANGSTORMS DBREF 5ZB8 A 3 400 UNP I6V2I0 I6V2I0_9EUR 3 400 SEQRES 1 A 31 THR ALA CYS SER ARG CYS TYR THR LYS TYR THR LEU GLN SEQRES 2 A 31 ASP ALA VAL SER LEU SER TRP LYS CYS PRO LYS CYS GLY SEQRES 3 A 31 GLY ILE ILE LYS LYS ATOM 1 N THR A 247 59.690 15.944 21.285 1.00 28.70 ATOM 2 CA THR A 247 60.838 16.838 21.240 1.00 30.76 ATOM 3 C THR A 247 61.692 16.628 22.482 1.00 34.25 ATOM 4 O THR A 247 61.204 16.752 23.610 1.00 33.34 ATOM 5 CB THR A 247 60.369 18.290 21.149 1.00 31.09 ATOM 6 OG1 THR A 247 59.616 18.475 19.944 1.00 31.61 ATOM 7 CG2 THR A 247 61.555 19.234 21.148 1.00 32.67 ATOM 8 N ALA A 248 62.966 16.302 22.281 1.00 34.10 ATOM 9 CA ALA A 248 63.820 15.928 23.397 1.00 34.00 ATOM 10 C ALA A 248 65.272 16.243 23.074 1.00 32.56 ATOM 11 O ALA A 248 65.666 16.304 21.906 1.00 31.66 ATOM 12 CB ALA A 248 63.667 14.440 23.738 1.00 29.94 ATOM 13 N CYS A 249 66.061 16.446 24.126 1.00 31.79 ATOM 14 CA CYS A 249 67.496 16.619 23.959 1.00 30.35 ATOM 15 C CYS A 249 68.120 15.332 23.436 1.00 31.02 ATOM 16 O CYS A 249 67.788 14.232 23.885 1.00 27.51 ATOM 17 CB CYS A 249 68.141 17.021 25.286 1.00 27.53 ATOM 18 SG CYS A 249 69.949 17.047 25.263 1.00 37.69 ATOM 19 N SER A 250 69.029 15.471 22.475 1.00 33.08 ATOM 20 CA SER A 250 69.658 14.311 21.859 1.00 30.81 ATOM 21 C SER A 250 70.777 13.719 22.704 1.00 32.41 ATOM 22 O SER A 250 71.379 12.723 22.290 1.00 30.86 ATOM 23 CB SER A 250 70.196 14.677 20.472 1.00 30.81 ATOM 24 OG SER A 250 71.162 15.710 20.552 1.00 35.83 ATOM 25 N ARG A 251 71.067 14.293 23.872 1.00 31.98 ATOM 26 CA ARG A 251 72.120 13.795 24.748 1.00 30.99 ATOM 27 C ARG A 251 71.585 13.216 26.049 1.00 35.37 ATOM 28 O ARG A 251 71.952 12.097 26.421 1.00 36.59 ATOM 29 CB ARG A 251 73.129 14.912 25.052 1.00 28.66 ATOM 30 CG ARG A 251 74.210 14.501 26.039 1.00 32.27 ATOM 31 CD ARG A 251 75.565 15.055 25.633 1.00 34.90 ATOM 32 NE ARG A 251 75.664 16.500 25.816 1.00 37.28 ATOM 33 CZ ARG A 251 76.517 17.272 25.153 1.00 46.13 ATOM 34 NH1 ARG A 251 77.330 16.736 24.255 1.00 46.92 ATOM 35 NH2 ARG A 251 76.552 18.579 25.378 1.00 51.35 ATOM 36 N CYS A 252 70.725 13.948 26.760 1.00 27.25 ATOM 37 CA CYS A 252 70.155 13.464 28.009 1.00 26.89 ATOM 38 C CYS A 252 68.707 13.017 27.880 1.00 27.40 ATOM 39 O CYS A 252 68.157 12.475 28.846 1.00 34.12 ATOM 40 CB CYS A 252 70.255 14.542 29.099 1.00 27.26 ATOM 41 SG CYS A 252 69.062 15.886 28.933 1.00 35.54 ATOM 42 N TYR A 253 68.076 13.242 26.726 1.00 25.53 ATOM 43 CA TYR A 253 66.748 12.732 26.394 1.00 25.85 ATOM 44 C TYR A 253 65.646 13.313 27.269 1.00 31.75 ATOM 45 O TYR A 253 64.541 12.762 27.318 1.00 31.72 ATOM 46 CB TYR A 253 66.721 11.201 26.444 1.00 22.54 ATOM 47 CG TYR A 253 67.849 10.587 25.650 1.00 27.56 ATOM 48 CD1 TYR A 253 67.861 10.658 24.263 1.00 25.93 ATOM 49 CD2 TYR A 253 68.914 9.958 26.285 1.00 27.39 ATOM 50 CE1 TYR A 253 68.893 10.109 23.530 1.00 30.87 ATOM 51 CE2 TYR A 253 69.953 9.406 25.559 1.00 25.24 ATOM 52 CZ TYR A 253 69.935 9.484 24.182 1.00 31.70 ATOM 53 OH TYR A 253 70.963 8.937 23.450 1.00 37.58 ATOM 54 N THR A 254 65.916 14.422 27.954 1.00 34.36 ATOM 55 CA THR A 254 64.860 15.144 28.650 1.00 38.41 ATOM 56 C THR A 254 63.861 15.695 27.641 1.00 36.00 ATOM 57 O THR A 254 64.246 16.289 26.630 1.00 35.79 ATOM 58 CB THR A 254 65.455 16.284 29.478 1.00 44.78 ATOM 59 OG1 THR A 254 66.449 15.762 30.368 1.00 48.56 ATOM 60 CG2 THR A 254 64.370 16.981 30.289 1.00 44.39 ATOM 61 N LYS A 255 62.574 15.496 27.913 1.00 35.16 ATOM 62 CA LYS A 255 61.537 15.946 26.996 1.00 35.22 ATOM 63 C LYS A 255 61.217 17.416 27.233 1.00 34.59 ATOM 64 O LYS A 255 61.179 17.885 28.374 1.00 39.08 ATOM 65 CB LYS A 255 60.269 15.106 27.159 1.00 38.22 ATOM 66 CG LYS A 255 60.511 13.612 27.333 1.00 39.79 ATOM 67 CD LYS A 255 61.293 13.014 26.176 1.00 39.52 ATOM 68 CE LYS A 255 61.614 11.548 26.433 1.00 47.52 ATOM 69 NZ LYS A 255 62.686 11.042 25.527 1.00 50.68 ATOM 70 N TYR A 256 60.986 18.143 26.142 1.00 37.25 ATOM 71 CA TYR A 256 60.607 19.546 26.194 1.00 34.33 ATOM 72 C TYR A 256 59.422 19.781 25.271 1.00 35.47 ATOM 73 O TYR A 256 59.285 19.126 24.234 1.00 35.67 ATOM 74 CB TYR A 256 61.759 20.473 25.772 1.00 37.59 ATOM 75 CG TYR A 256 62.998 20.391 26.634 1.00 33.88 ATOM 76 CD1 TYR A 256 63.165 21.232 27.728 1.00 38.55 ATOM 77 CD2 TYR A 256 64.011 19.485 26.344 1.00 31.27 ATOM 78 CE1 TYR A 256 64.302 21.165 28.515 1.00 38.47 ATOM 79 CE2 TYR A 256 65.150 19.411 27.125 1.00 36.21 ATOM 80 CZ TYR A 256 65.290 20.252 28.208 1.00 39.02 ATOM 81 OH TYR A 256 66.425 20.173 28.981 1.00 45.53 ATOM 82 N THR A 257 58.564 20.722 25.658 1.00 41.74 ATOM 83 CA THR A 257 57.520 21.170 24.753 1.00 42.88 ATOM 84 C THR A 257 58.147 21.909 23.575 1.00 44.62 ATOM 85 O THR A 257 59.308 22.326 23.616 1.00 46.39 ATOM 86 CB THR A 257 56.521 22.077 25.473 1.00 46.50 ATOM 87 OG1 THR A 257 57.139 23.335 25.775 1.00 47.94 ATOM 88 CG2 THR A 257 56.046 21.428 26.765 1.00 45.67 ATOM 89 N LEU A 258 57.362 22.064 22.508 1.00 47.27 ATOM 90 CA LEU A 258 57.887 22.692 21.300 1.00 48.02 ATOM 91 C LEU A 258 58.264 24.147 21.550 1.00 53.47 ATOM 92 O LEU A 258 59.355 24.590 21.171 1.00 55.84 ATOM 93 CB LEU A 258 56.873 22.589 20.163 1.00 48.29 ATOM 94 CG LEU A 258 57.298 23.331 18.894 1.00 43.18 ATOM 95 CD1 LEU A 258 58.628 22.797 18.376 1.00 44.25 ATOM 96 CD2 LEU A 258 56.225 23.234 17.828 1.00 45.07 ATOM 97 N GLN A 259 57.374 24.911 22.189 1.00 56.43 ATOM 98 CA GLN A 259 57.647 26.331 22.381 1.00 62.30 ATOM 99 C GLN A 259 58.793 26.562 23.360 1.00 59.90 ATOM 100 O GLN A 259 59.502 27.568 23.251 1.00 60.33 ATOM 101 CB GLN A 259 56.387 27.063 22.845 1.00 68.85 ATOM 102 CG GLN A 259 55.930 26.747 24.258 1.00 75.31 ATOM 103 CD GLN A 259 55.006 27.818 24.809 1.00 85.58 ATOM 104 OE1 GLN A 259 55.138 28.997 24.475 1.00 85.73 ATOM 105 NE2 GLN A 259 54.060 27.414 25.649 1.00 91.05 ATOM 106 N ASP A 260 58.995 25.649 24.314 1.00 60.33 ATOM 107 CA ASP A 260 60.154 25.760 25.192 1.00 60.27 ATOM 108 C ASP A 260 61.449 25.544 24.419 1.00 51.10 ATOM 109 O ASP A 260 62.437 26.251 24.642 1.00 52.94 ATOM 110 CB ASP A 260 60.045 24.763 26.346 1.00 64.54 ATOM 111 CG ASP A 260 59.141 25.255 27.461 1.00 77.06 ATOM 112 OD1 ASP A 260 58.528 26.331 27.302 1.00 85.27 ATOM 113 OD2 ASP A 260 59.050 24.566 28.500 1.00 80.18 ATOM 114 N ALA A 261 61.458 24.578 23.498 1.00 46.77 ATOM 115 CA ALA A 261 62.668 24.294 22.734 1.00 47.46 ATOM 116 C ALA A 261 63.042 25.459 21.826 1.00 52.76 ATOM 117 O ALA A 261 64.226 25.787 21.686 1.00 55.88 ATOM 118 CB ALA A 261 62.484 23.015 21.918 1.00 42.74 ATOM 119 N VAL A 262 62.050 26.094 21.199 1.00 47.50 ATOM 120 CA VAL A 262 62.336 27.209 20.301 1.00 49.79 ATOM 121 C VAL A 262 62.829 28.419 21.087 1.00 54.04 ATOM 122 O VAL A 262 63.760 29.114 20.662 1.00 55.36 ATOM 123 CB VAL A 262 61.095 27.542 19.454 1.00 49.31 ATOM 124 CG1 VAL A 262 61.325 28.805 18.638 1.00 52.30 ATOM 125 CG2 VAL A 262 60.753 26.371 18.545 1.00 46.41 ATOM 126 N SER A 263 62.223 28.686 22.247 1.00 55.81 ATOM 127 CA SER A 263 62.691 29.788 23.080 1.00 58.83 ATOM 128 C SER A 263 64.065 29.496 23.670 1.00 60.61 ATOM 129 O SER A 263 64.866 30.419 23.860 1.00 66.51 ATOM 130 CB SER A 263 61.681 30.077 24.191 1.00 61.22 ATOM 131 OG SER A 263 61.475 28.936 25.004 1.00 60.86 ATOM 132 N LEU A 264 64.357 28.226 23.958 1.00 54.33 ATOM 133 CA LEU A 264 65.684 27.821 24.408 1.00 54.45 ATOM 134 C LEU A 264 66.715 27.821 23.288 1.00 57.96 ATOM 135 O LEU A 264 67.871 27.468 23.547 1.00 61.13 ATOM 136 CB LEU A 264 65.627 26.429 25.042 1.00 47.82 ATOM 137 CG LEU A 264 65.024 26.293 26.441 1.00 48.63 ATOM 138 CD1 LEU A 264 64.761 24.831 26.759 1.00 43.15 ATOM 139 CD2 LEU A 264 65.943 26.912 27.482 1.00 51.43 ATOM 140 N SER A 265 66.327 28.195 22.067 1.00 58.44 ATOM 141 CA SER A 265 67.218 28.182 20.906 1.00 62.12 ATOM 142 C SER A 265 67.760 26.782 20.630 1.00 57.36 ATOM 143 O SER A 265 68.896 26.621 20.173 1.00 56.99 ATOM 144 CB SER A 265 68.367 29.182 21.069 1.00 66.48 ATOM 145 OG SER A 265 69.224 29.160 19.942 1.00 70.48 ATOM 146 N TRP A 266 66.945 25.765 20.917 1.00 53.39 ATOM 147 CA TRP A 266 67.259 24.357 20.683 1.00 48.99 ATOM 148 C TRP A 266 68.444 23.868 21.509 1.00 44.86 ATOM 149 O TRP A 266 69.040 22.835 21.187 1.00 40.99 ATOM 150 CB TRP A 266 67.506 24.077 19.195 1.00 47.11 ATOM 151 CG TRP A 266 66.328 24.397 18.325 1.00 50.75 ATOM 152 CD1 TRP A 266 66.190 25.468 17.491 1.00 53.45 ATOM 153 CD2 TRP A 266 65.116 23.641 18.212 1.00 51.23 ATOM 154 NE1 TRP A 266 64.969 25.424 16.861 1.00 55.81 ATOM 155 CE2 TRP A 266 64.290 24.312 17.288 1.00 56.95 ATOM 156 CE3 TRP A 266 64.649 22.462 18.802 1.00 46.69 ATOM 157 CZ2 TRP A 266 63.024 23.843 16.938 1.00 59.77 ATOM 158 CZ3 TRP A 266 63.393 21.998 18.455 1.00 51.85 ATOM 159 CH2 TRP A 266 62.595 22.687 17.532 1.00 58.02 ATOM 160 N LYS A 267 68.800 24.580 22.574 1.00 48.85 ATOM 161 CA LYS A 267 69.856 24.159 23.486 1.00 47.89 ATOM 162 C LYS A 267 69.233 23.661 24.783 1.00 45.40 ATOM 163 O LYS A 267 68.423 24.363 25.398 1.00 49.67 ATOM 164 CB LYS A 267 70.834 25.301 23.774 1.00 52.48 ATOM 165 CG LYS A 267 71.893 24.948 24.808 1.00 59.16 ATOM 166 CD LYS A 267 72.766 26.143 25.149 1.00 68.26 ATOM 167 CE LYS A 267 73.731 25.816 26.279 1.00 70.87 ATOM 168 NZ LYS A 267 73.014 25.521 27.552 1.00 69.28 ATOM 169 N CYS A 268 69.607 22.456 25.187 1.00 35.92 ATOM 170 CA CYS A 268 69.098 21.893 26.431 1.00 35.45 ATOM 171 C CYS A 268 69.751 22.586 27.621 1.00 48.06 ATOM 172 O CYS A 268 70.983 22.638 27.702 1.00 49.71 ATOM 173 CB CYS A 268 69.365 20.391 26.480 1.00 32.41 ATOM 174 SG CYS A 268 69.009 19.618 28.073 1.00 42.05 ATOM 175 N PRO A 269 68.972 23.129 28.561 1.00 49.70 ATOM 176 CA PRO A 269 69.574 23.775 29.736 1.00 50.10 ATOM 177 C PRO A 269 70.078 22.798 30.785 1.00 48.95 ATOM 178 O PRO A 269 70.751 23.228 31.733 1.00 47.09 ATOM 179 CB PRO A 269 68.422 24.625 30.286 1.00 52.35 ATOM 180 CG PRO A 269 67.201 23.852 29.917 1.00 52.55 ATOM 181 CD PRO A 269 67.501 23.208 28.579 1.00 51.00 ATOM 182 N LYS A 270 69.781 21.506 30.647 1.00 53.72 ATOM 183 CA LYS A 270 70.196 20.524 31.642 1.00 51.62 ATOM 184 C LYS A 270 71.629 20.061 31.403 1.00 49.93 ATOM 185 O LYS A 270 72.428 19.982 32.343 1.00 49.84 ATOM 186 CB LYS A 270 69.232 19.336 31.628 1.00 44.71 ATOM 187 CG LYS A 270 69.573 18.221 32.596 1.00 48.51 ATOM 188 CD LYS A 270 68.537 17.110 32.510 1.00 55.05 ATOM 189 CE LYS A 270 68.780 16.034 33.552 1.00 59.19 ATOM 190 NZ LYS A 270 67.743 14.967 33.483 1.00 59.50 ATOM 191 N CYS A 271 71.973 19.758 30.150 1.00 42.98 ATOM 192 CA CYS A 271 73.303 19.268 29.819 1.00 41.98 ATOM 193 C CYS A 271 73.975 20.033 28.688 1.00 43.90 ATOM 194 O CYS A 271 75.118 19.711 28.344 1.00 41.87 ATOM 195 CB CYS A 271 73.249 17.780 29.443 1.00 36.94 ATOM 196 SG CYS A 271 72.502 17.449 27.830 1.00 39.56 ATOM 197 N GLY A 272 73.313 21.028 28.102 1.00 44.22 ATOM 198 CA GLY A 272 73.890 21.763 26.996 1.00 41.33 ATOM 199 C GLY A 272 73.774 21.088 25.650 1.00 36.59 ATOM 200 O GLY A 272 74.394 21.552 24.686 1.00 53.20 ATOM 201 N GLY A 273 72.995 20.010 25.549 1.00 37.16 ATOM 202 CA GLY A 273 72.882 19.280 24.305 1.00 35.02 ATOM 203 C GLY A 273 71.906 19.909 23.327 1.00 34.04 ATOM 204 O GLY A 273 71.190 20.862 23.631 1.00 37.01 ATOM 205 N ILE A 274 71.885 19.345 22.124 1.00 31.71 ATOM 206 CA ILE A 274 71.037 19.836 21.044 1.00 31.73 ATOM 207 C ILE A 274 69.673 19.166 21.150 1.00 34.77 ATOM 208 O ILE A 274 69.573 17.934 21.126 1.00 35.27 ATOM 209 CB ILE A 274 71.673 19.572 19.672 1.00 34.40 ATOM 210 CG1 ILE A 274 73.054 20.226 19.586 1.00 33.15 ATOM 211 CG2 ILE A 274 70.766 20.082 18.561 1.00 33.83 ATOM 212 CD1 ILE A 274 73.811 19.898 18.317 1.00 34.12 ATOM 213 N ILE A 275 68.624 19.973 21.267 1.00 34.42 ATOM 214 CA ILE A 275 67.263 19.453 21.321 1.00 34.76 ATOM 215 C ILE A 275 66.804 19.126 19.907 1.00 35.82 ATOM 216 O ILE A 275 66.993 19.924 18.981 1.00 36.56 ATOM 217 CB ILE A 275 66.320 20.463 21.991 1.00 38.18 ATOM 218 CG1 ILE A 275 66.849 20.856 23.370 1.00 38.60 ATOM 219 CG2 ILE A 275 64.926 19.885 22.117 1.00 36.23 ATOM 220 CD1 ILE A 275 65.993 21.880 24.079 1.00 36.19 ATOM 221 N LYS A 276 66.203 17.952 19.736 1.00 35.15 ATOM 222 CA LYS A 276 65.688 17.514 18.446 1.00 31.70 ATOM 223 C LYS A 276 64.171 17.644 18.426 1.00 34.15 ATOM 224 O LYS A 276 63.493 17.229 19.372 1.00 33.82 ATOM 225 CB LYS A 276 66.098 16.071 18.149 1.00 34.72 ATOM 226 CG LYS A 276 67.581 15.892 17.877 1.00 40.14 ATOM 227 CD LYS A 276 68.020 16.702 16.668 1.00 50.05 ATOM 228 CE LYS A 276 69.497 16.499 16.376 1.00 58.96 ATOM 229 NZ LYS A 276 69.946 17.306 15.208 1.00 63.12 ATOM 230 N LYS A 277 63.649 18.222 17.348 1.00 38.80 ATOM 231 CA LYS A 277 62.212 18.386 17.191 1.00 38.45 ATOM 232 C LYS A 277 61.542 17.028 17.019 1.00 38.98 ATOM 233 O LYS A 277 61.996 16.196 16.229 1.00 40.61 ATOM 234 CB LYS A 277 61.926 19.279 15.986 1.00 42.34 ATOM 235 CG LYS A 277 60.478 19.680 15.799 1.00 41.93 ATOM 236 CD LYS A 277 60.359 20.516 14.540 1.00 48.79 ATOM 237 CE LYS A 277 59.003 21.169 14.405 1.00 53.93 ATOM 238 NZ LYS A 277 58.977 22.031 13.193 1.00 59.31 ATOM 239 ZN ZN A 503 70.163 17.480 27.596 1.00 39.36 TER