HEADER DNA BINDING PROTEIN 31-DEC-69 5ZB8 TITLE Crystal structure of the novel lesion-specific endonuclease PfuEndoQ TITLE 2 from Pyrococcus furiosus COMPND MOL_ID: 1; COMPND 2 MOLECULE: PfuEndoQ; COMPND 3 CHAIN: A, B, C, D, E; COMPND 4 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.50 ANGSTORMS DBREF 5ZB8 D 3 400 UNP I6V2I0 I6V2I0_9EUR 3 400 SEQRES 1 D 31 THR ALA CYS SER ARG CYS TYR THR LYS TYR THR LEU GLN SEQRES 2 D 31 ASP ALA VAL SER LEU SER TRP LYS CYS PRO LYS CYS GLY SEQRES 3 D 31 GLY ILE ILE LYS LYS ATOM 1 N THR D 247 47.448 29.722 -35.254 1.00 32.93 ATOM 2 CA THR D 247 46.820 28.626 -35.977 1.00 37.55 ATOM 3 C THR D 247 46.227 27.644 -34.976 1.00 40.33 ATOM 4 O THR D 247 46.934 27.139 -34.098 1.00 39.81 ATOM 5 CB THR D 247 47.836 27.925 -36.875 1.00 40.36 ATOM 6 OG1 THR D 247 48.385 28.867 -37.805 1.00 45.24 ATOM 7 CG2 THR D 247 47.174 26.793 -37.642 1.00 39.98 ATOM 8 N ALA D 248 44.930 27.373 -35.100 1.00 39.96 ATOM 9 CA ALA D 248 44.248 26.562 -34.106 1.00 38.09 ATOM 10 C ALA D 248 43.081 25.826 -34.745 1.00 36.17 ATOM 11 O ALA D 248 42.571 26.219 -35.798 1.00 31.54 ATOM 12 CB ALA D 248 43.761 27.419 -32.931 1.00 33.57 ATOM 13 N CYS D 249 42.672 24.740 -34.094 1.00 34.03 ATOM 14 CA CYS D 249 41.443 24.061 -34.478 1.00 32.29 ATOM 15 C CYS D 249 40.252 24.982 -34.250 1.00 34.21 ATOM 16 O CYS D 249 40.200 25.727 -33.268 1.00 30.15 ATOM 17 CB CYS D 249 41.281 22.768 -33.675 1.00 31.16 ATOM 18 SG CYS D 249 39.682 21.945 -33.870 1.00 40.38 ATOM 19 N SER D 250 39.296 24.942 -35.172 1.00 32.23 ATOM 20 CA SER D 250 38.101 25.766 -35.066 1.00 32.90 ATOM 21 C SER D 250 37.001 25.105 -34.247 1.00 35.50 ATOM 22 O SER D 250 35.906 25.668 -34.139 1.00 37.54 ATOM 23 CB SER D 250 37.575 26.114 -36.461 1.00 35.98 ATOM 24 OG SER D 250 37.321 24.943 -37.217 1.00 38.34 ATOM 25 N ARG D 251 37.262 23.933 -33.671 1.00 34.06 ATOM 26 CA ARG D 251 36.291 23.228 -32.846 1.00 36.42 ATOM 27 C ARG D 251 36.679 23.196 -31.375 1.00 41.27 ATOM 28 O ARG D 251 35.891 23.617 -30.521 1.00 48.01 ATOM 29 CB ARG D 251 36.099 21.796 -33.366 1.00 34.05 ATOM 30 CG ARG D 251 35.057 21.001 -32.601 1.00 34.27 ATOM 31 CD ARG D 251 34.047 20.387 -33.550 1.00 38.46 ATOM 32 NE ARG D 251 34.554 19.190 -34.215 1.00 40.57 ATOM 33 CZ ARG D 251 34.037 18.689 -35.331 1.00 40.45 ATOM 34 NH1 ARG D 251 33.009 19.292 -35.912 1.00 41.20 ATOM 35 NH2 ARG D 251 34.551 17.592 -35.874 1.00 39.62 ATOM 36 N CYS D 252 37.876 22.706 -31.051 1.00 34.37 ATOM 37 CA CYS D 252 38.348 22.657 -29.676 1.00 34.29 ATOM 38 C CYS D 252 39.390 23.720 -29.358 1.00 37.55 ATOM 39 O CYS D 252 39.812 23.822 -28.200 1.00 43.17 ATOM 40 CB CYS D 252 38.932 21.268 -29.367 1.00 39.23 ATOM 41 SG CYS D 252 40.515 20.934 -30.176 1.00 43.60 ATOM 42 N TYR D 253 39.824 24.498 -30.351 1.00 38.03 ATOM 43 CA TYR D 253 40.727 25.631 -30.174 1.00 36.75 ATOM 44 C TYR D 253 42.106 25.224 -29.672 1.00 36.55 ATOM 45 O TYR D 253 42.811 26.034 -29.061 1.00 38.77 ATOM 46 CB TYR D 253 40.104 26.688 -29.256 1.00 34.45 ATOM 47 CG TYR D 253 38.703 27.051 -29.685 1.00 35.88 ATOM 48 CD1 TYR D 253 38.478 27.743 -30.869 1.00 34.38 ATOM 49 CD2 TYR D 253 37.605 26.679 -28.923 1.00 37.24 ATOM 50 CE1 TYR D 253 37.197 28.065 -31.276 1.00 36.19 ATOM 51 CE2 TYR D 253 36.320 26.997 -29.320 1.00 39.72 ATOM 52 CZ TYR D 253 36.121 27.690 -30.499 1.00 41.71 ATOM 53 OH TYR D 253 34.844 28.011 -30.900 1.00 46.73 ATOM 54 N THR D 254 42.513 23.986 -29.938 1.00 38.07 ATOM 55 CA THR D 254 43.889 23.575 -29.697 1.00 39.50 ATOM 56 C THR D 254 44.811 24.258 -30.699 1.00 41.69 ATOM 57 O THR D 254 44.528 24.285 -31.900 1.00 37.18 ATOM 58 CB THR D 254 44.018 22.055 -29.809 1.00 37.84 ATOM 59 OG1 THR D 254 43.278 21.428 -28.755 1.00 31.63 ATOM 60 CG2 THR D 254 45.478 21.628 -29.723 1.00 32.28 ATOM 61 N LYS D 255 45.916 24.810 -30.207 1.00 43.86 ATOM 62 CA LYS D 255 46.846 25.522 -31.068 1.00 44.77 ATOM 63 C LYS D 255 47.809 24.548 -31.740 1.00 44.70 ATOM 64 O LYS D 255 48.215 23.539 -31.158 1.00 46.79 ATOM 65 CB LYS D 255 47.629 26.564 -30.270 1.00 48.43 ATOM 66 CG LYS D 255 46.811 27.290 -29.208 1.00 51.23 ATOM 67 CD LYS D 255 45.621 28.030 -29.800 1.00 53.81 ATOM 68 CE LYS D 255 44.788 28.680 -28.705 1.00 58.71 ATOM 69 NZ LYS D 255 43.535 29.287 -29.235 1.00 58.52 ATOM 70 N TYR D 256 48.169 24.862 -32.983 1.00 43.34 ATOM 71 CA TYR D 256 49.109 24.063 -33.754 1.00 39.41 ATOM 72 C TYR D 256 50.063 24.987 -34.492 1.00 41.20 ATOM 73 O TYR D 256 49.668 26.071 -34.932 1.00 44.48 ATOM 74 CB TYR D 256 48.395 23.157 -34.769 1.00 36.93 ATOM 75 CG TYR D 256 47.474 22.124 -34.161 1.00 34.18 ATOM 76 CD1 TYR D 256 47.952 20.876 -33.782 1.00 40.02 ATOM 77 CD2 TYR D 256 46.123 22.390 -33.982 1.00 32.50 ATOM 78 CE1 TYR D 256 47.113 19.925 -33.232 1.00 43.82 ATOM 79 CE2 TYR D 256 45.275 21.447 -33.432 1.00 40.64 ATOM 80 CZ TYR D 256 45.775 20.216 -33.059 1.00 45.22 ATOM 81 OH TYR D 256 44.933 19.275 -32.511 1.00 47.38 ATOM 82 N THR D 257 51.315 24.558 -34.629 1.00 40.05 ATOM 83 CA THR D 257 52.256 25.300 -35.450 1.00 41.65 ATOM 84 C THR D 257 51.873 25.173 -36.923 1.00 44.57 ATOM 85 O THR D 257 51.045 24.343 -37.310 1.00 46.89 ATOM 86 CB THR D 257 53.685 24.806 -35.223 1.00 47.92 ATOM 87 OG1 THR D 257 53.797 23.444 -35.652 1.00 57.60 ATOM 88 CG2 THR D 257 54.056 24.902 -33.751 1.00 45.89 ATOM 89 N LEU D 258 52.489 26.017 -37.753 1.00 46.44 ATOM 90 CA LEU D 258 52.125 26.061 -39.167 1.00 44.96 ATOM 91 C LEU D 258 52.446 24.745 -39.864 1.00 49.53 ATOM 92 O LEU D 258 51.618 24.207 -40.608 1.00 52.64 ATOM 93 CB LEU D 258 52.835 27.226 -39.858 1.00 43.40 ATOM 94 CG LEU D 258 52.620 27.343 -41.369 1.00 42.76 ATOM 95 CD1 LEU D 258 51.136 27.405 -41.707 1.00 45.36 ATOM 96 CD2 LEU D 258 53.344 28.563 -41.913 1.00 42.38 ATOM 97 N GLN D 259 53.644 24.205 -39.633 1.00 51.01 ATOM 98 CA GLN D 259 54.030 22.974 -40.314 1.00 64.68 ATOM 99 C GLN D 259 53.343 21.747 -39.727 1.00 65.93 ATOM 100 O GLN D 259 53.124 20.766 -40.448 1.00 67.55 ATOM 101 CB GLN D 259 55.551 22.803 -40.285 1.00 73.12 ATOM 102 CG GLN D 259 56.202 23.008 -38.930 1.00 79.29 ATOM 103 CD GLN D 259 57.712 22.858 -38.996 1.00 87.55 ATOM 104 OE1 GLN D 259 58.226 21.810 -39.389 1.00 91.90 ATOM 105 NE2 GLN D 259 58.429 23.913 -38.625 1.00 88.29 ATOM 106 N ASP D 260 52.995 21.773 -38.438 1.00 65.47 ATOM 107 CA ASP D 260 52.207 20.678 -37.879 1.00 64.06 ATOM 108 C ASP D 260 50.806 20.654 -38.475 1.00 56.57 ATOM 109 O ASP D 260 50.248 19.579 -38.719 1.00 54.96 ATOM 110 CB ASP D 260 52.142 20.790 -36.356 1.00 67.74 ATOM 111 CG ASP D 260 53.307 20.103 -35.670 1.00 76.40 ATOM 112 OD1 ASP D 260 53.917 19.205 -36.288 1.00 82.02 ATOM 113 OD2 ASP D 260 53.608 20.454 -34.510 1.00 79.20 ATOM 114 N ALA D 261 50.225 21.831 -38.725 1.00 50.15 ATOM 115 CA ALA D 261 48.904 21.887 -39.340 1.00 51.44 ATOM 116 C ALA D 261 48.935 21.359 -40.770 1.00 53.74 ATOM 117 O ALA D 261 47.971 20.735 -41.227 1.00 54.87 ATOM 118 CB ALA D 261 48.370 23.319 -39.309 1.00 46.78 ATOM 119 N VAL D 262 50.034 21.597 -41.489 1.00 54.34 ATOM 120 CA VAL D 262 50.142 21.116 -42.863 1.00 56.87 ATOM 121 C VAL D 262 50.259 19.596 -42.888 1.00 61.14 ATOM 122 O VAL D 262 49.556 18.916 -43.645 1.00 65.80 ATOM 123 CB VAL D 262 51.332 21.784 -43.574 1.00 55.77 ATOM 124 CG1 VAL D 262 51.547 21.164 -44.946 1.00 50.87 ATOM 125 CG2 VAL D 262 51.103 23.281 -43.694 1.00 52.14 ATOM 126 N SER D 263 51.145 19.041 -42.057 1.00 60.89 ATOM 127 CA SER D 263 51.331 17.595 -42.022 1.00 65.52 ATOM 128 C SER D 263 50.092 16.863 -41.521 1.00 64.82 ATOM 129 O SER D 263 49.920 15.680 -41.832 1.00 66.61 ATOM 130 CB SER D 263 52.540 17.241 -41.155 1.00 67.73 ATOM 131 OG SER D 263 52.413 17.785 -39.853 1.00 69.42 ATOM 132 N LEU D 264 49.231 17.533 -40.756 1.00 58.69 ATOM 133 CA LEU D 264 47.952 16.965 -40.351 1.00 54.93 ATOM 134 C LEU D 264 46.866 17.153 -41.402 1.00 56.12 ATOM 135 O LEU D 264 45.713 16.787 -41.147 1.00 53.13 ATOM 136 CB LEU D 264 47.491 17.587 -39.029 1.00 50.84 ATOM 137 CG LEU D 264 48.313 17.295 -37.773 1.00 51.65 ATOM 138 CD1 LEU D 264 47.899 18.229 -36.646 1.00 47.87 ATOM 139 CD2 LEU D 264 48.159 15.844 -37.351 1.00 52.47 ATOM 140 N SER D 265 47.207 17.715 -42.564 1.00 58.04 ATOM 141 CA SER D 265 46.239 18.049 -43.610 1.00 59.57 ATOM 142 C SER D 265 45.138 18.966 -43.082 1.00 59.30 ATOM 143 O SER D 265 43.989 18.897 -43.527 1.00 56.99 ATOM 144 CB SER D 265 45.641 16.788 -44.242 1.00 61.34 ATOM 145 OG SER D 265 45.126 17.063 -45.533 1.00 62.75 ATOM 146 N TRP D 266 45.492 19.819 -42.116 1.00 58.16 ATOM 147 CA TRP D 266 44.593 20.829 -41.554 1.00 48.25 ATOM 148 C TRP D 266 43.366 20.209 -40.892 1.00 50.13 ATOM 149 O TRP D 266 42.298 20.823 -40.838 1.00 50.78 ATOM 150 CB TRP D 266 44.180 21.848 -42.618 1.00 42.13 ATOM 151 CG TRP D 266 45.336 22.659 -43.099 1.00 47.98 ATOM 152 CD1 TRP D 266 46.180 22.357 -44.129 1.00 50.53 ATOM 153 CD2 TRP D 266 45.794 23.902 -42.557 1.00 49.29 ATOM 154 NE1 TRP D 266 47.130 23.340 -44.266 1.00 52.87 ATOM 155 CE2 TRP D 266 46.914 24.301 -43.313 1.00 54.20 ATOM 156 CE3 TRP D 266 45.360 24.720 -41.508 1.00 49.13 ATOM 157 CZ2 TRP D 266 47.608 25.482 -43.054 1.00 56.73 ATOM 158 CZ3 TRP D 266 46.049 25.893 -41.253 1.00 51.84 ATOM 159 CH2 TRP D 266 47.161 26.262 -42.022 1.00 54.93 ATOM 160 N LYS D 267 43.516 18.994 -40.373 1.00 50.43 ATOM 161 CA LYS D 267 42.462 18.306 -39.639 1.00 51.94 ATOM 162 C LYS D 267 42.969 18.015 -38.235 1.00 53.76 ATOM 163 O LYS D 267 44.018 17.383 -38.070 1.00 58.75 ATOM 164 CB LYS D 267 42.049 17.015 -40.349 1.00 52.78 ATOM 165 CG LYS D 267 40.891 16.279 -39.694 1.00 53.96 ATOM 166 CD LYS D 267 40.465 15.084 -40.533 1.00 60.70 ATOM 167 CE LYS D 267 39.356 14.297 -39.858 1.00 65.74 ATOM 168 NZ LYS D 267 39.796 13.737 -38.550 1.00 70.18 ATOM 169 N CYS D 268 42.234 18.479 -37.233 1.00 49.14 ATOM 170 CA CYS D 268 42.647 18.299 -35.845 1.00 42.70 ATOM 171 C CYS D 268 42.606 16.824 -35.469 1.00 48.18 ATOM 172 O CYS D 268 41.557 16.184 -35.624 1.00 48.38 ATOM 173 CB CYS D 268 41.750 19.109 -34.913 1.00 33.51 ATOM 174 SG CYS D 268 42.120 18.905 -33.154 0.87 37.47 ATOM 175 N PRO D 269 43.706 16.243 -34.982 1.00 52.95 ATOM 176 CA PRO D 269 43.684 14.823 -34.601 1.00 52.06 ATOM 177 C PRO D 269 42.922 14.543 -33.317 1.00 49.67 ATOM 178 O PRO D 269 42.676 13.369 -33.010 1.00 49.82 ATOM 179 CB PRO D 269 45.170 14.480 -34.449 1.00 53.09 ATOM 180 CG PRO D 269 45.809 15.777 -34.077 1.00 54.22 ATOM 181 CD PRO D 269 45.039 16.847 -34.808 1.00 53.39 ATOM 182 N LYS D 270 42.541 15.573 -32.560 1.00 48.39 ATOM 183 CA LYS D 270 41.799 15.356 -31.322 1.00 46.93 ATOM 184 C LYS D 270 40.309 15.175 -31.590 1.00 45.88 ATOM 185 O LYS D 270 39.716 14.161 -31.206 1.00 51.76 ATOM 186 CB LYS D 270 42.025 16.524 -30.356 1.00 48.25 ATOM 187 CG LYS D 270 43.436 16.636 -29.808 1.00 53.23 ATOM 188 CD LYS D 270 43.540 17.792 -28.823 1.00 54.89 ATOM 189 CE LYS D 270 44.925 17.886 -28.207 1.00 61.39 ATOM 190 NZ LYS D 270 45.017 19.016 -27.241 1.00 64.02 ATOM 191 N CYS D 271 39.688 16.154 -32.250 1.00 39.62 ATOM 192 CA CYS D 271 38.242 16.179 -32.422 1.00 40.28 ATOM 193 C CYS D 271 37.794 16.132 -33.876 1.00 42.58 ATOM 194 O CYS D 271 36.586 16.199 -34.136 1.00 44.08 ATOM 195 CB CYS D 271 37.656 17.433 -31.760 1.00 38.30 ATOM 196 SG CYS D 271 38.082 18.969 -32.605 1.00 40.37 ATOM 197 N GLY D 272 38.717 16.021 -34.828 1.00 39.66 ATOM 198 CA GLY D 272 38.341 16.022 -36.226 1.00 40.32 ATOM 199 C GLY D 272 37.902 17.357 -36.774 1.00 43.11 ATOM 200 O GLY D 272 37.359 17.408 -37.882 1.00 42.98 ATOM 201 N GLY D 273 38.114 18.442 -36.033 1.00 40.51 ATOM 202 CA GLY D 273 37.728 19.754 -36.505 1.00 36.80 ATOM 203 C GLY D 273 38.678 20.290 -37.559 1.00 33.96 ATOM 204 O GLY D 273 39.737 19.729 -37.844 1.00 36.21 ATOM 205 N ILE D 274 38.278 21.410 -38.146 1.00 32.21 ATOM 206 CA ILE D 274 39.051 22.061 -39.197 1.00 40.08 ATOM 207 C ILE D 274 40.017 23.045 -38.552 1.00 44.48 ATOM 208 O ILE D 274 39.602 23.930 -37.796 1.00 47.39 ATOM 209 CB ILE D 274 38.132 22.771 -40.202 1.00 39.77 ATOM 210 CG1 ILE D 274 37.209 21.762 -40.888 1.00 40.83 ATOM 211 CG2 ILE D 274 38.950 23.529 -41.232 1.00 33.08 ATOM 212 CD1 ILE D 274 36.217 22.400 -41.836 1.00 39.81 ATOM 213 N ILE D 275 41.304 22.885 -38.840 1.00 43.33 ATOM 214 CA ILE D 275 42.314 23.825 -38.371 1.00 44.23 ATOM 215 C ILE D 275 42.327 25.034 -39.294 1.00 44.64 ATOM 216 O ILE D 275 42.234 24.900 -40.520 1.00 51.99 ATOM 217 CB ILE D 275 43.696 23.151 -38.313 1.00 41.59 ATOM 218 CG1 ILE D 275 43.624 21.847 -37.518 1.00 38.85 ATOM 219 CG2 ILE D 275 44.719 24.085 -37.689 1.00 36.88 ATOM 220 CD1 ILE D 275 44.947 21.117 -37.432 1.00 32.77 ATOM 221 N LYS D 276 42.439 26.223 -38.709 1.00 38.30 ATOM 222 CA LYS D 276 42.415 27.466 -39.465 1.00 37.95 ATOM 223 C LYS D 276 43.725 28.220 -39.290 1.00 41.82 ATOM 224 O LYS D 276 44.272 28.298 -38.184 1.00 37.54 ATOM 225 CB LYS D 276 41.237 28.347 -39.044 1.00 36.29 ATOM 226 CG LYS D 276 39.892 27.804 -39.494 1.00 37.35 ATOM 227 CD LYS D 276 38.753 28.735 -39.122 1.00 39.01 ATOM 228 CE LYS D 276 37.416 28.151 -39.550 1.00 44.33 ATOM 229 NZ LYS D 276 36.281 29.057 -39.225 1.00 51.31 ATOM 230 N LYS D 277 44.214 28.769 -40.398 1.00 44.86 ATOM 231 CA LYS D 277 45.464 29.513 -40.410 1.00 44.57 ATOM 232 C LYS D 277 45.377 30.728 -39.498 1.00 41.51 ATOM 233 O LYS D 277 44.365 31.432 -39.472 1.00 42.70 ATOM 234 CB LYS D 277 45.776 29.952 -41.839 1.00 48.89 ATOM 235 CG LYS D 277 47.237 29.988 -42.224 1.00 49.54 ATOM 236 CD LYS D 277 47.353 30.420 -43.677 1.00 50.89 ATOM 237 CE LYS D 277 48.787 30.428 -44.160 1.00 53.81 ATOM 238 NZ LYS D 277 48.888 31.050 -45.511 1.00 54.16 ATOM 239 ZN ZN D 503 40.160 20.066 -32.339 1.00 39.66 TER