HEADER DNA BINDING PROTEIN 31-DEC-69 5ZB8 TITLE Crystal structure of the novel lesion-specific endonuclease PfuEndoQ TITLE 2 from Pyrococcus furiosus COMPND MOL_ID: 1; COMPND 2 MOLECULE: PfuEndoQ; COMPND 3 CHAIN: A, B, C, D, E; COMPND 4 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.50 ANGSTORMS DBREF 5ZB8 E 3 400 UNP I6V2I0 I6V2I0_9EUR 3 400 SEQRES 1 E 31 THR ALA CYS SER ARG CYS TYR THR LYS TYR THR LEU GLN SEQRES 2 E 31 ASP ALA VAL SER LEU SER TRP LYS CYS PRO LYS CYS GLY SEQRES 3 E 31 GLY ILE ILE LYS LYS ATOM 1 N THR E 247 -8.992 27.066 -39.913 1.00 36.34 ATOM 2 CA THR E 247 -9.747 26.935 -41.151 1.00 34.81 ATOM 3 C THR E 247 -10.063 25.467 -41.406 1.00 38.45 ATOM 4 O THR E 247 -9.164 24.621 -41.417 1.00 39.47 ATOM 5 CB THR E 247 -8.955 27.520 -42.320 1.00 34.65 ATOM 6 OG1 THR E 247 -8.812 28.935 -42.144 1.00 35.10 ATOM 7 CG2 THR E 247 -9.661 27.243 -43.636 1.00 35.30 ATOM 8 N ALA E 248 -11.343 25.162 -41.606 1.00 28.97 ATOM 9 CA ALA E 248 -11.757 23.774 -41.736 1.00 28.87 ATOM 10 C ALA E 248 -13.082 23.693 -42.476 1.00 31.61 ATOM 11 O ALA E 248 -13.846 24.661 -42.538 1.00 32.80 ATOM 12 CB ALA E 248 -11.876 23.094 -40.369 1.00 30.33 ATOM 13 N CYS E 249 -13.340 22.513 -43.034 1.00 32.37 ATOM 14 CA CYS E 249 -14.631 22.230 -43.642 1.00 33.42 ATOM 15 C CYS E 249 -15.704 22.164 -42.565 1.00 38.12 ATOM 16 O CYS E 249 -15.506 21.547 -41.515 1.00 36.46 ATOM 17 CB CYS E 249 -14.574 20.914 -44.417 1.00 31.15 ATOM 18 SG CYS E 249 -16.180 20.325 -45.013 1.00 37.22 ATOM 19 N SER E 250 -16.841 22.800 -42.822 1.00 41.95 ATOM 20 CA SER E 250 -17.925 22.830 -41.852 1.00 41.61 ATOM 21 C SER E 250 -18.749 21.548 -41.840 1.00 39.98 ATOM 22 O SER E 250 -19.765 21.493 -41.140 1.00 37.59 ATOM 23 CB SER E 250 -18.835 24.035 -42.113 1.00 41.45 ATOM 24 OG SER E 250 -19.382 23.990 -43.419 1.00 43.07 ATOM 25 N ARG E 251 -18.338 20.519 -42.579 1.00 39.04 ATOM 26 CA ARG E 251 -19.056 19.250 -42.599 1.00 39.21 ATOM 27 C ARG E 251 -18.217 18.092 -42.083 1.00 40.73 ATOM 28 O ARG E 251 -18.658 17.370 -41.181 1.00 42.99 ATOM 29 CB ARG E 251 -19.557 18.946 -44.019 1.00 39.94 ATOM 30 CG ARG E 251 -20.528 17.778 -44.086 1.00 43.10 ATOM 31 CD ARG E 251 -21.592 18.004 -45.150 1.00 42.39 ATOM 32 NE ARG E 251 -21.051 17.912 -46.502 1.00 42.46 ATOM 33 CZ ARG E 251 -21.686 18.337 -47.589 1.00 39.78 ATOM 34 NH1 ARG E 251 -22.883 18.895 -47.481 1.00 41.57 ATOM 35 NH2 ARG E 251 -21.122 18.213 -48.783 1.00 41.37 ATOM 36 N CYS E 252 -17.017 17.890 -42.627 1.00 39.45 ATOM 37 CA CYS E 252 -16.134 16.824 -42.171 1.00 37.98 ATOM 38 C CYS E 252 -15.028 17.318 -41.249 1.00 36.15 ATOM 39 O CYS E 252 -14.283 16.495 -40.707 1.00 34.84 ATOM 40 CB CYS E 252 -15.512 16.094 -43.367 1.00 40.78 ATOM 41 SG CYS E 252 -14.203 16.997 -44.220 1.00 43.23 ATOM 42 N TYR E 253 -14.897 18.633 -41.076 1.00 35.83 ATOM 43 CA TYR E 253 -14.000 19.248 -40.098 1.00 27.79 ATOM 44 C TYR E 253 -12.529 18.976 -40.391 1.00 33.01 ATOM 45 O TYR E 253 -11.682 19.107 -39.502 1.00 35.32 ATOM 46 CB TYR E 253 -14.365 18.810 -38.677 1.00 27.13 ATOM 47 CG TYR E 253 -15.821 19.072 -38.362 1.00 39.29 ATOM 48 CD1 TYR E 253 -16.293 20.371 -38.223 1.00 37.10 ATOM 49 CD2 TYR E 253 -16.727 18.025 -38.225 1.00 34.31 ATOM 50 CE1 TYR E 253 -17.625 20.623 -37.944 1.00 37.29 ATOM 51 CE2 TYR E 253 -18.061 18.268 -37.943 1.00 33.35 ATOM 52 CZ TYR E 253 -18.503 19.568 -37.805 1.00 42.23 ATOM 53 OH TYR E 253 -19.827 19.812 -37.527 1.00 47.03 ATOM 54 N THR E 254 -12.210 18.607 -41.629 1.00 36.09 ATOM 55 CA THR E 254 -10.820 18.547 -42.058 1.00 35.73 ATOM 56 C THR E 254 -10.225 19.948 -42.062 1.00 35.28 ATOM 57 O THR E 254 -10.806 20.878 -42.626 1.00 37.00 ATOM 58 CB THR E 254 -10.722 17.929 -43.452 1.00 37.31 ATOM 59 OG1 THR E 254 -11.245 16.595 -43.429 1.00 38.52 ATOM 60 CG2 THR E 254 -9.278 17.900 -43.923 1.00 33.26 ATOM 61 N LYS E 255 -9.069 20.102 -41.422 1.00 36.33 ATOM 62 CA LYS E 255 -8.410 21.399 -41.371 1.00 34.87 ATOM 63 C LYS E 255 -7.633 21.646 -42.658 1.00 39.74 ATOM 64 O LYS E 255 -7.025 20.731 -43.221 1.00 44.76 ATOM 65 CB LYS E 255 -7.467 21.484 -40.170 1.00 32.29 ATOM 66 CG LYS E 255 -8.003 20.873 -38.884 1.00 36.71 ATOM 67 CD LYS E 255 -9.325 21.482 -38.459 1.00 40.40 ATOM 68 CE LYS E 255 -9.838 20.822 -37.189 1.00 49.04 ATOM 69 NZ LYS E 255 -11.314 20.964 -37.035 1.00 47.82 ATOM 70 N TYR E 256 -7.658 22.893 -43.122 1.00 32.41 ATOM 71 CA TYR E 256 -6.954 23.301 -44.329 1.00 36.65 ATOM 72 C TYR E 256 -6.168 24.573 -44.055 1.00 42.63 ATOM 73 O TYR E 256 -6.614 25.436 -43.292 1.00 44.49 ATOM 74 CB TYR E 256 -7.923 23.537 -45.498 1.00 37.22 ATOM 75 CG TYR E 256 -8.634 22.292 -45.974 1.00 36.64 ATOM 76 CD1 TYR E 256 -8.043 21.445 -46.901 1.00 37.28 ATOM 77 CD2 TYR E 256 -9.898 21.967 -45.501 1.00 33.76 ATOM 78 CE1 TYR E 256 -8.689 20.306 -47.340 1.00 39.90 ATOM 79 CE2 TYR E 256 -10.553 20.830 -45.934 1.00 36.53 ATOM 80 CZ TYR E 256 -9.944 20.003 -46.854 1.00 41.05 ATOM 81 OH TYR E 256 -10.594 18.869 -47.287 1.00 38.38 ATOM 82 N THR E 257 -4.997 24.685 -44.675 1.00 44.79 ATOM 83 CA THR E 257 -4.254 25.931 -44.610 1.00 47.62 ATOM 84 C THR E 257 -4.999 27.017 -45.380 1.00 50.37 ATOM 85 O THR E 257 -5.832 26.739 -46.248 1.00 49.27 ATOM 86 CB THR E 257 -2.845 25.759 -45.179 1.00 47.52 ATOM 87 OG1 THR E 257 -2.915 25.620 -46.604 1.00 51.77 ATOM 88 CG2 THR E 257 -2.181 24.526 -44.590 1.00 43.72 ATOM 89 N LEU E 258 -4.694 28.273 -45.046 1.00 53.48 ATOM 90 CA LEU E 258 -5.373 29.387 -45.700 1.00 54.25 ATOM 91 C LEU E 258 -5.128 29.382 -47.204 1.00 59.26 ATOM 92 O LEU E 258 -6.051 29.621 -47.991 1.00 60.56 ATOM 93 CB LEU E 258 -4.922 30.713 -45.089 1.00 49.86 ATOM 94 CG LEU E 258 -5.507 31.961 -45.751 1.00 45.99 ATOM 95 CD1 LEU E 258 -7.027 31.919 -45.733 1.00 41.08 ATOM 96 CD2 LEU E 258 -4.995 33.212 -45.065 1.00 43.37 ATOM 97 N GLN E 259 -3.891 29.102 -47.622 1.00 63.20 ATOM 98 CA GLN E 259 -3.579 29.115 -49.048 1.00 72.00 ATOM 99 C GLN E 259 -4.251 27.955 -49.775 1.00 70.14 ATOM 100 O GLN E 259 -4.681 28.103 -50.924 1.00 72.46 ATOM 101 CB GLN E 259 -2.065 29.081 -49.257 1.00 82.08 ATOM 102 CG GLN E 259 -1.387 27.818 -48.752 1.00 87.91 ATOM 103 CD GLN E 259 -0.300 27.333 -49.690 1.00 93.71 ATOM 104 OE1 GLN E 259 0.452 28.129 -50.252 1.00 93.07 ATOM 105 NE2 GLN E 259 -0.221 26.019 -49.876 1.00 96.18 ATOM 106 N ASP E 260 -4.353 26.792 -49.125 1.00 66.76 ATOM 107 CA ASP E 260 -5.037 25.666 -49.750 1.00 68.89 ATOM 108 C ASP E 260 -6.521 25.945 -49.934 1.00 62.94 ATOM 109 O ASP E 260 -7.132 25.438 -50.881 1.00 61.55 ATOM 110 CB ASP E 260 -4.840 24.394 -48.924 1.00 72.77 ATOM 111 CG ASP E 260 -3.551 23.670 -49.261 1.00 77.04 ATOM 112 OD1 ASP E 260 -2.731 24.233 -50.016 1.00 80.80 ATOM 113 OD2 ASP E 260 -3.364 22.534 -48.777 1.00 75.73 ATOM 114 N ALA E 261 -7.113 26.754 -49.052 1.00 56.85 ATOM 115 CA ALA E 261 -8.548 27.005 -49.124 1.00 53.93 ATOM 116 C ALA E 261 -8.918 27.793 -50.376 1.00 63.17 ATOM 117 O ALA E 261 -9.923 27.489 -51.028 1.00 71.67 ATOM 118 CB ALA E 261 -9.018 27.739 -47.869 1.00 47.05 ATOM 119 N VAL E 262 -8.123 28.806 -50.731 1.00 62.34 ATOM 120 CA VAL E 262 -8.456 29.610 -51.904 1.00 66.62 ATOM 121 C VAL E 262 -8.163 28.846 -53.189 1.00 62.53 ATOM 122 O VAL E 262 -8.884 28.996 -54.183 1.00 67.65 ATOM 123 CB VAL E 262 -7.720 30.962 -51.864 1.00 72.31 ATOM 124 CG1 VAL E 262 -8.271 31.832 -50.742 1.00 68.72 ATOM 125 CG2 VAL E 262 -6.223 30.759 -51.694 1.00 75.93 ATOM 126 N SER E 263 -7.116 28.015 -53.200 1.00 56.89 ATOM 127 CA SER E 263 -6.859 27.185 -54.371 1.00 59.35 ATOM 128 C SER E 263 -7.935 26.123 -54.542 1.00 62.77 ATOM 129 O SER E 263 -8.236 25.724 -55.672 1.00 62.93 ATOM 130 CB SER E 263 -5.477 26.536 -54.273 1.00 61.48 ATOM 131 OG SER E 263 -5.309 25.868 -53.036 1.00 67.20 ATOM 132 N LEU E 264 -8.519 25.656 -53.440 1.00 52.76 ATOM 133 CA LEU E 264 -9.677 24.776 -53.490 1.00 51.57 ATOM 134 C LEU E 264 -10.984 25.541 -53.646 1.00 53.38 ATOM 135 O LEU E 264 -12.049 24.913 -53.678 1.00 55.14 ATOM 136 CB LEU E 264 -9.731 23.907 -52.230 1.00 47.38 ATOM 137 CG LEU E 264 -8.609 22.883 -52.044 1.00 49.48 ATOM 138 CD1 LEU E 264 -8.591 22.369 -50.613 1.00 46.77 ATOM 139 CD2 LEU E 264 -8.765 21.734 -53.024 1.00 47.99 ATOM 140 N SER E 265 -10.924 26.873 -53.740 1.00 51.91 ATOM 141 CA SER E 265 -12.105 27.728 -53.882 1.00 54.80 ATOM 142 C SER E 265 -13.085 27.536 -52.728 1.00 49.75 ATOM 143 O SER E 265 -14.303 27.605 -52.916 1.00 49.49 ATOM 144 CB SER E 265 -12.802 27.496 -55.227 1.00 62.76 ATOM 145 OG SER E 265 -13.773 28.496 -55.483 1.00 68.37 ATOM 146 N TRP E 266 -12.554 27.286 -51.529 1.00 46.37 ATOM 147 CA TRP E 266 -13.333 27.124 -50.302 1.00 41.45 ATOM 148 C TRP E 266 -14.360 26.000 -50.402 1.00 41.13 ATOM 149 O TRP E 266 -15.364 26.005 -49.682 1.00 42.81 ATOM 150 CB TRP E 266 -14.012 28.438 -49.902 1.00 42.92 ATOM 151 CG TRP E 266 -13.023 29.531 -49.650 1.00 49.76 ATOM 152 CD1 TRP E 266 -12.602 30.478 -50.537 1.00 51.69 ATOM 153 CD2 TRP E 266 -12.308 29.775 -48.433 1.00 51.26 ATOM 154 NE1 TRP E 266 -11.677 31.304 -49.944 1.00 52.84 ATOM 155 CE2 TRP E 266 -11.479 30.893 -48.652 1.00 52.61 ATOM 156 CE3 TRP E 266 -12.294 29.160 -47.176 1.00 54.95 ATOM 157 CZ2 TRP E 266 -10.643 31.409 -47.662 1.00 55.21 ATOM 158 CZ3 TRP E 266 -11.465 29.674 -46.195 1.00 55.86 ATOM 159 CH2 TRP E 266 -10.650 30.786 -46.444 1.00 56.51 ATOM 160 N LYS E 267 -14.122 25.032 -51.282 1.00 43.55 ATOM 161 CA LYS E 267 -14.931 23.826 -51.374 1.00 45.20 ATOM 162 C LYS E 267 -14.081 22.638 -50.947 1.00 44.11 ATOM 163 O LYS E 267 -12.981 22.436 -51.474 1.00 39.74 ATOM 164 CB LYS E 267 -15.464 23.621 -52.794 1.00 44.06 ATOM 165 CG LYS E 267 -16.498 22.511 -52.911 1.00 50.82 ATOM 166 CD LYS E 267 -17.020 22.382 -54.332 1.00 57.46 ATOM 167 CE LYS E 267 -18.163 21.384 -54.405 1.00 63.01 ATOM 168 NZ LYS E 267 -18.657 21.193 -55.798 1.00 70.33 ATOM 169 N CYS E 268 -14.581 21.867 -49.995 1.00 42.19 ATOM 170 CA CYS E 268 -13.821 20.742 -49.466 1.00 38.61 ATOM 171 C CYS E 268 -13.683 19.654 -50.523 1.00 44.81 ATOM 172 O CYS E 268 -14.700 19.128 -50.993 1.00 45.90 ATOM 173 CB CYS E 268 -14.497 20.188 -48.218 1.00 33.59 ATOM 174 SG CYS E 268 -13.674 18.745 -47.511 0.89 34.42 ATOM 175 N PRO E 269 -12.463 19.286 -50.927 1.00 47.78 ATOM 176 CA PRO E 269 -12.310 18.218 -51.925 1.00 49.68 ATOM 177 C PRO E 269 -12.652 16.839 -51.392 1.00 51.06 ATOM 178 O PRO E 269 -12.778 15.900 -52.189 1.00 50.94 ATOM 179 CB PRO E 269 -10.830 18.311 -52.308 1.00 54.46 ATOM 180 CG PRO E 269 -10.172 18.837 -51.073 1.00 52.11 ATOM 181 CD PRO E 269 -11.164 19.789 -50.449 1.00 52.45 ATOM 182 N LYS E 270 -12.806 16.689 -50.075 1.00 52.67 ATOM 183 CA LYS E 270 -13.078 15.384 -49.486 1.00 50.56 ATOM 184 C LYS E 270 -14.564 15.052 -49.534 1.00 45.45 ATOM 185 O LYS E 270 -14.949 13.951 -49.943 1.00 41.82 ATOM 186 CB LYS E 270 -12.563 15.352 -48.046 1.00 49.79 ATOM 187 CG LYS E 270 -12.629 13.998 -47.364 1.00 46.62 ATOM 188 CD LYS E 270 -12.047 14.088 -45.961 1.00 46.18 ATOM 189 CE LYS E 270 -11.985 12.730 -45.287 1.00 47.60 ATOM 190 NZ LYS E 270 -11.432 12.832 -43.908 1.00 49.77 ATOM 191 N CYS E 271 -15.415 15.998 -49.128 1.00 40.73 ATOM 192 CA CYS E 271 -16.848 15.757 -49.041 1.00 41.67 ATOM 193 C CYS E 271 -17.698 16.811 -49.733 1.00 42.37 ATOM 194 O CYS E 271 -18.929 16.703 -49.699 1.00 40.47 ATOM 195 CB CYS E 271 -17.284 15.662 -47.571 1.00 29.66 ATOM 196 SG CYS E 271 -17.423 17.262 -46.737 1.00 32.71 ATOM 197 N GLY E 272 -17.093 17.820 -50.353 1.00 40.67 ATOM 198 CA GLY E 272 -17.866 18.857 -51.008 1.00 37.28 ATOM 199 C GLY E 272 -18.431 19.914 -50.090 1.00 38.10 ATOM 200 O GLY E 272 -19.183 20.777 -50.556 1.00 36.36 ATOM 201 N GLY E 273 -18.092 19.879 -48.804 1.00 36.07 ATOM 202 CA GLY E 273 -18.624 20.840 -47.861 1.00 34.66 ATOM 203 C GLY E 273 -18.001 22.215 -48.009 1.00 35.90 ATOM 204 O GLY E 273 -17.034 22.433 -48.741 1.00 41.92 ATOM 205 N ILE E 274 -18.580 23.165 -47.282 1.00 33.44 ATOM 206 CA ILE E 274 -18.139 24.554 -47.311 1.00 34.37 ATOM 207 C ILE E 274 -17.038 24.748 -46.278 1.00 36.40 ATOM 208 O ILE E 274 -17.217 24.428 -45.096 1.00 36.20 ATOM 209 CB ILE E 274 -19.315 25.510 -47.049 1.00 31.13 ATOM 210 CG1 ILE E 274 -20.389 25.353 -48.130 1.00 34.18 ATOM 211 CG2 ILE E 274 -18.823 26.950 -46.975 1.00 31.55 ATOM 212 CD1 ILE E 274 -21.597 26.245 -47.924 1.00 33.04 ATOM 213 N ILE E 275 -15.902 25.275 -46.720 1.00 41.04 ATOM 214 CA ILE E 275 -14.780 25.537 -45.826 1.00 42.07 ATOM 215 C ILE E 275 -14.981 26.892 -45.162 1.00 38.52 ATOM 216 O ILE E 275 -15.281 27.888 -45.831 1.00 40.81 ATOM 217 CB ILE E 275 -13.451 25.484 -46.595 1.00 38.27 ATOM 218 CG1 ILE E 275 -13.278 24.124 -47.272 1.00 40.45 ATOM 219 CG2 ILE E 275 -12.286 25.763 -45.667 1.00 34.34 ATOM 220 CD1 ILE E 275 -11.972 23.988 -48.024 1.00 39.72 ATOM 221 N LYS E 276 -14.821 26.932 -43.843 1.00 38.10 ATOM 222 CA LYS E 276 -14.932 28.163 -43.073 1.00 38.10 ATOM 223 C LYS E 276 -13.538 28.645 -42.696 1.00 39.23 ATOM 224 O LYS E 276 -12.716 27.860 -42.212 1.00 38.39 ATOM 225 CB LYS E 276 -15.772 27.945 -41.814 1.00 40.27 ATOM 226 CG LYS E 276 -17.222 27.582 -42.081 1.00 47.49 ATOM 227 CD LYS E 276 -18.007 28.780 -42.585 1.00 54.07 ATOM 228 CE LYS E 276 -19.475 28.435 -42.772 1.00 57.09 ATOM 229 NZ LYS E 276 -20.284 29.633 -43.127 1.00 60.61 ATOM 230 N LYS E 277 -13.274 29.931 -42.917 1.00 40.73 ATOM 231 CA LYS E 277 -11.970 30.483 -42.578 1.00 41.59 ATOM 232 C LYS E 277 -11.820 30.604 -41.066 1.00 38.34 ATOM 233 O LYS E 277 -12.753 30.996 -40.360 1.00 36.37 ATOM 234 CB LYS E 277 -11.771 31.851 -43.230 1.00 39.93 ATOM 235 CG LYS E 277 -10.345 32.372 -43.104 1.00 42.86 ATOM 236 CD LYS E 277 -10.270 33.890 -43.167 1.00 44.37 ATOM 237 CE LYS E 277 -10.561 34.413 -44.560 1.00 41.21 ATOM 238 NZ LYS E 277 -10.371 35.887 -44.640 1.00 43.52 ATOM 239 ZN ZN E 503 -15.362 18.194 -45.887 1.00 43.65 TER