HEADER VIRUS 31-DEC-69 6CBE TITLE Atomic structure of a rationally engineered gene delivery vector, TITLE 2 AAV2.5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: Capsid protein VP1; COMPND 3 CHAIN: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, 0, 1, 2, 3, 4, 5, a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, q, r, s, t, u, v, w, x, y, z, 6, 7; COMPND 4 ENGINEERED: YES; DBREF 6CBE L 1 736 UNP P03135 CAPSD_AAV2S 1 735 SEQRES 1 L 518 ASP GLY VAL GLY ASN SER SER GLY ASN TRP HIS CYS ASP SEQRES 2 L 518 SER THR TRP MET GLY ASP ARG VAL ILE THR THR SER THR SEQRES 3 L 518 ARG THR TRP ALA LEU PRO THR TYR ASN ASN HIS LEU TYR SEQRES 4 L 518 LYS GLN ILE SER SER ALA SER THR GLY ALA SER ASN ASP SEQRES 5 L 518 ASN HIS TYR PHE GLY TYR SER THR PRO TRP GLY TYR PHE SEQRES 6 L 518 ASP PHE ASN ARG PHE HIS CYS HIS PHE SER PRO ARG ASP SEQRES 7 L 518 TRP GLN ARG LEU ILE ASN ASN ASN TRP GLY PHE ARG PRO SEQRES 8 L 518 LYS ARG LEU ASN PHE LYS LEU PHE ASN ILE GLN VAL LYS SEQRES 9 L 518 GLU VAL THR GLN ASN ASP GLY THR THR THR ILE ALA ASN SEQRES 10 L 518 ASN LEU THR SER THR VAL GLN VAL PHE THR ASP SER GLU SEQRES 11 L 518 TYR GLN LEU PRO TYR VAL LEU GLY SER ALA HIS GLN GLY SEQRES 12 L 518 CYS LEU PRO PRO PHE PRO ALA ASP VAL PHE MET VAL PRO SEQRES 13 L 518 GLN TYR GLY TYR LEU THR LEU ASN ASN GLY SER GLN ALA SEQRES 14 L 518 VAL GLY ARG SER SER PHE TYR CYS LEU GLU TYR PHE PRO SEQRES 15 L 518 SER GLN MET LEU ARG THR GLY ASN ASN PHE THR PHE SER SEQRES 16 L 518 TYR THR PHE GLU ASP VAL PRO PHE HIS SER SER TYR ALA SEQRES 17 L 518 HIS SER GLN SER LEU ASP ARG LEU MET ASN PRO LEU ILE SEQRES 18 L 518 ASP GLN TYR LEU TYR TYR LEU SER ARG THR ASN THR PRO SEQRES 19 L 518 SER GLY THR THR THR GLN SER ARG LEU GLN PHE SER GLN SEQRES 20 L 518 ALA GLY ALA SER ASP ILE ARG ASP GLN SER ARG ASN TRP SEQRES 21 L 518 LEU PRO GLY PRO CYS TYR ARG GLN GLN ARG VAL SER LYS SEQRES 22 L 518 THR SER ALA ASP ASN ASN ASN SER GLU TYR SER TRP THR SEQRES 23 L 518 GLY ALA THR LYS TYR HIS LEU ASN GLY ARG ASP SER LEU SEQRES 24 L 518 VAL ASN PRO GLY PRO ALA MET ALA SER HIS LYS ASP ASP SEQRES 25 L 518 GLU GLU LYS PHE PHE PRO GLN SER GLY VAL LEU ILE PHE SEQRES 26 L 518 GLY LYS GLN GLY SER GLU LYS THR ASN VAL ASP ILE GLU SEQRES 27 L 518 LYS VAL MET ILE THR ASP GLU GLU GLU ILE ARG THR THR SEQRES 28 L 518 ASN PRO VAL ALA THR GLU GLN TYR GLY SER VAL SER THR SEQRES 29 L 518 ASN LEU GLN ARG GLY ASN ARG GLN ALA ALA THR ALA ASP SEQRES 30 L 518 VAL ASN THR GLN GLY VAL LEU PRO GLY MET VAL TRP GLN SEQRES 31 L 518 ASP ARG ASP VAL TYR LEU GLN GLY PRO ILE TRP ALA LYS SEQRES 32 L 518 ILE PRO HIS THR ASP GLY HIS PHE HIS PRO SER PRO LEU SEQRES 33 L 518 MET GLY GLY PHE GLY LEU LYS HIS PRO PRO PRO GLN ILE SEQRES 34 L 518 LEU ILE LYS ASN THR PRO VAL PRO ALA ASN PRO SER THR SEQRES 35 L 518 THR PHE SER ALA ALA LYS PHE ALA SER PHE ILE THR GLN SEQRES 36 L 518 TYR SER THR GLY GLN VAL SER VAL GLU ILE GLU TRP GLU SEQRES 37 L 518 LEU GLN LYS GLU ASN SER LYS ARG TRP ASN PRO GLU ILE SEQRES 38 L 518 GLN TYR THR SER ASN TYR ALA LYS SER ALA ASN VAL ASP SEQRES 39 L 518 PHE THR VAL ASP ASN ASN GLY VAL TYR SER GLU PRO ARG SEQRES 40 L 518 PRO ILE GLY THR ARG TYR LEU THR ARG ASN LEU ATOM 1 N ASP H 219 78.656 38.193 -2.928 1.00 72.58 ATOM 2 CA ASP H 219 77.915 39.115 -3.782 1.00 71.51 ATOM 3 C ASP H 219 78.470 40.529 -3.692 1.00 69.36 ATOM 4 O ASP H 219 78.545 41.238 -4.692 1.00 69.12 ATOM 5 CB ASP H 219 76.433 39.117 -3.411 1.00 79.16 ATOM 6 CG ASP H 219 75.737 37.836 -3.803 1.00 80.55 ATOM 7 OD1 ASP H 219 76.298 37.090 -4.629 1.00 81.46 ATOM 8 OD2 ASP H 219 74.633 37.572 -3.286 1.00 81.89 ATOM 9 N GLY H 220 78.863 40.936 -2.485 1.00 67.46 ATOM 10 CA GLY H 220 79.301 42.278 -2.227 1.00 64.84 ATOM 11 C GLY H 220 80.797 42.388 -2.032 1.00 62.53 ATOM 12 O GLY H 220 81.570 41.480 -2.365 1.00 62.31 ATOM 13 N VAL H 221 81.216 43.527 -1.482 1.00 60.18 ATOM 14 CA VAL H 221 82.630 43.734 -1.201 1.00 58.03 ATOM 15 C VAL H 221 83.043 42.998 0.065 1.00 59.55 ATOM 16 O VAL H 221 84.152 42.466 0.150 1.00 59.70 ATOM 17 CB VAL H 221 82.937 45.239 -1.106 1.00 60.13 ATOM 18 CG1 VAL H 221 84.382 45.461 -0.720 1.00 56.86 ATOM 19 CG2 VAL H 221 82.629 45.925 -2.422 1.00 56.83 ATOM 20 N GLY H 222 82.162 42.938 1.057 1.00 54.31 ATOM 21 CA GLY H 222 82.519 42.385 2.347 1.00 54.78 ATOM 22 C GLY H 222 82.307 40.895 2.477 1.00 55.64 ATOM 23 O GLY H 222 82.879 40.262 3.366 1.00 54.73 ATOM 24 N ASN H 223 81.471 40.321 1.622 1.00 53.23 ATOM 25 CA ASN H 223 81.263 38.884 1.655 1.00 55.17 ATOM 26 C ASN H 223 82.396 38.172 0.920 1.00 54.75 ATOM 27 O ASN H 223 83.078 38.745 0.071 1.00 54.60 ATOM 28 CB ASN H 223 79.910 38.526 1.046 1.00 55.62 ATOM 29 CG ASN H 223 79.496 37.097 1.333 1.00 58.17 ATOM 30 OD1 ASN H 223 80.322 36.244 1.653 1.00 60.54 ATOM 31 ND2 ASN H 223 78.200 36.831 1.228 1.00 60.70 ATOM 32 N SER H 224 82.602 36.910 1.274 1.00 51.31 ATOM 33 CA SER H 224 83.626 36.076 0.664 1.00 51.41 ATOM 34 C SER H 224 83.012 35.221 -0.436 1.00 49.54 ATOM 35 O SER H 224 81.911 34.690 -0.280 1.00 49.33 ATOM 36 CB SER H 224 84.291 35.190 1.715 1.00 46.01 ATOM 37 OG SER H 224 85.275 34.358 1.139 1.00 49.41 ATOM 38 N SER H 225 83.732 35.091 -1.553 1.00 46.23 ATOM 39 CA SER H 225 83.190 34.399 -2.719 1.00 47.98 ATOM 40 C SER H 225 83.263 32.884 -2.592 1.00 48.58 ATOM 41 O SER H 225 82.418 32.184 -3.156 1.00 47.82 ATOM 42 CB SER H 225 83.919 34.841 -3.987 1.00 43.71 ATOM 43 OG SER H 225 83.694 36.210 -4.260 1.00 45.01 ATOM 44 N GLY H 226 84.257 32.357 -1.887 1.00 45.50 ATOM 45 CA GLY H 226 84.366 30.921 -1.745 1.00 44.67 ATOM 46 C GLY H 226 85.380 30.470 -0.719 1.00 44.92 ATOM 47 O GLY H 226 86.321 31.194 -0.394 1.00 44.98 ATOM 48 N ASN H 227 85.171 29.274 -0.188 1.00 47.85 ATOM 49 CA ASN H 227 86.036 28.651 0.799 1.00 46.45 ATOM 50 C ASN H 227 87.222 27.952 0.141 1.00 44.58 ATOM 51 O ASN H 227 87.203 27.615 -1.043 1.00 43.30 ATOM 52 CB ASN H 227 85.244 27.659 1.635 1.00 42.47 ATOM 53 CG ASN H 227 84.195 28.331 2.472 1.00 45.46 ATOM 54 OD1 ASN H 227 84.292 29.516 2.773 1.00 47.46 ATOM 55 ND2 ASN H 227 83.176 27.578 2.850 1.00 47.83 ATOM 56 N TRP H 228 88.266 27.743 0.935 1.00 42.60 ATOM 57 CA TRP H 228 89.454 27.012 0.514 1.00 42.49 ATOM 58 C TRP H 228 89.196 25.523 0.731 1.00 42.95 ATOM 59 O TRP H 228 89.027 25.086 1.871 1.00 41.65 ATOM 60 CB TRP H 228 90.644 27.465 1.351 1.00 33.93 ATOM 61 CG TRP H 228 91.954 26.896 0.982 1.00 35.98 ATOM 62 CD1 TRP H 228 92.464 25.701 1.370 1.00 37.14 ATOM 63 CD2 TRP H 228 92.999 27.563 0.273 1.00 37.00 ATOM 64 NE1 TRP H 228 93.729 25.546 0.877 1.00 37.54 ATOM 65 CE2 TRP H 228 94.085 26.681 0.205 1.00 36.72 ATOM 66 CE3 TRP H 228 93.107 28.808 -0.339 1.00 36.61 ATOM 67 CZ2 TRP H 228 95.265 27.002 -0.448 1.00 37.31 ATOM 68 CZ3 TRP H 228 94.278 29.128 -0.984 1.00 36.53 ATOM 69 CH2 TRP H 228 95.343 28.233 -1.034 1.00 37.05 ATOM 70 N HIS H 229 89.163 24.733 -0.343 1.00 43.68 ATOM 71 CA HIS H 229 89.085 23.277 -0.226 1.00 45.97 ATOM 72 C HIS H 229 90.294 22.674 -0.924 1.00 45.94 ATOM 73 O HIS H 229 90.367 22.693 -2.154 1.00 44.99 ATOM 74 CB HIS H 229 87.803 22.729 -0.850 1.00 49.49 ATOM 75 CG HIS H 229 86.547 23.324 -0.301 1.00 52.34 ATOM 76 ND1 HIS H 229 86.136 23.133 1.001 1.00 53.95 ATOM 77 CD2 HIS H 229 85.591 24.082 -0.888 1.00 54.09 ATOM 78 CE1 HIS H 229 84.993 23.766 1.198 1.00 55.17 ATOM 79 NE2 HIS H 229 84.641 24.350 0.067 1.00 55.10 ATOM 80 N CYS H 230 91.254 22.165 -0.155 1.00 43.93 ATOM 81 CA CYS H 230 92.365 21.407 -0.716 1.00 46.57 ATOM 82 C CYS H 230 92.293 19.903 -0.441 1.00 46.66 ATOM 83 O CYS H 230 93.213 19.177 -0.823 1.00 46.25 ATOM 84 CB CYS H 230 93.693 21.987 -0.220 1.00 46.92 ATOM 85 SG CYS H 230 95.164 21.436 -1.111 1.00 49.40 ATOM 86 N ASP H 231 91.249 19.414 0.223 1.00 50.57 ATOM 87 CA ASP H 231 91.223 18.033 0.700 1.00 50.16 ATOM 88 C ASP H 231 90.993 17.039 -0.444 1.00 47.96 ATOM 89 O ASP H 231 90.520 17.392 -1.524 1.00 48.07 ATOM 90 CB ASP H 231 90.134 17.870 1.759 1.00 51.88 ATOM 91 CG ASP H 231 90.139 16.496 2.409 1.00 54.66 ATOM 92 OD1 ASP H 231 91.107 16.182 3.133 1.00 56.95 ATOM 93 OD2 ASP H 231 89.171 15.733 2.203 1.00 57.19 ATOM 94 N SER H 232 91.343 15.773 -0.191 1.00 48.14 ATOM 95 CA SER H 232 91.024 14.663 -1.083 1.00 47.62 ATOM 96 C SER H 232 90.399 13.520 -0.293 1.00 47.37 ATOM 97 O SER H 232 90.799 13.252 0.842 1.00 47.27 ATOM 98 CB SER H 232 92.262 14.145 -1.809 1.00 44.17 ATOM 99 OG SER H 232 93.149 13.521 -0.908 1.00 42.65 ATOM 100 N THR H 233 89.427 12.838 -0.898 1.00 45.36 ATOM 101 CA THR H 233 88.701 11.752 -0.245 1.00 44.44 ATOM 102 C THR H 233 88.777 10.507 -1.111 1.00 44.14 ATOM 103 O THR H 233 88.515 10.570 -2.314 1.00 43.30 ATOM 104 CB THR H 233 87.241 12.131 0.014 1.00 49.32 ATOM 105 OG1 THR H 233 86.609 12.478 -1.221 1.00 49.71 ATOM 106 CG2 THR H 233 87.157 13.305 0.966 1.00 48.90 ATOM 107 N TRP H 234 89.127 9.376 -0.496 1.00 41.12 ATOM 108 CA TRP H 234 89.453 8.183 -1.268 1.00 42.88 ATOM 109 C TRP H 234 88.272 7.237 -1.429 1.00 43.88 ATOM 110 O TRP H 234 88.368 6.269 -2.186 1.00 43.42 ATOM 111 CB TRP H 234 90.637 7.478 -0.631 1.00 34.32 ATOM 112 CG TRP H 234 91.881 8.187 -0.937 1.00 34.20 ATOM 113 CD1 TRP H 234 92.390 9.253 -0.279 1.00 34.05 ATOM 114 CD2 TRP H 234 92.805 7.871 -1.972 1.00 34.20 ATOM 115 NE1 TRP H 234 93.571 9.641 -0.849 1.00 34.88 ATOM 116 CE2 TRP H 234 93.851 8.802 -1.892 1.00 35.02 ATOM 117 CE3 TRP H 234 92.851 6.889 -2.961 1.00 35.30 ATOM 118 CZ2 TRP H 234 94.927 8.785 -2.763 1.00 35.98 ATOM 119 CZ3 TRP H 234 93.915 6.874 -3.824 1.00 35.67 ATOM 120 CH2 TRP H 234 94.940 7.816 -3.722 1.00 35.86 ATOM 121 N MET H 235 87.180 7.465 -0.704 1.00 46.41 ATOM 122 CA MET H 235 85.858 6.863 -0.975 1.00 49.98 ATOM 123 C M