HEADER RECOMBINATION/DNA 31-DEC-69 6CIK TITLE Pre-Reaction Complex, RAG1(E962Q)/2-intact/nicked 12/23RSS complex in TITLE 2 Mn2+ COMPND MOL_ID: 3; COMPND 2 MOLECULE: High mobility group protein B1; COMPND 3 CHAIN: N; COMPND 4 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 3.15 ANGSTORMS DBREF 6CIK N 1 163 UNP P09429 HMGB1_HUMAN 1 163 SEQRES 1 N 30 PHE VAL GLN THR CYS ARG GLU GLU HIS LYS LYS LYS HIS SEQRES 2 N 30 PRO ASP ALA SER VAL ASN PHE SER GLU PHE SER LYS LYS SEQRES 3 N 30 CYS SER GLU ARG ATOM 1 N PHE N 19 -34.439 47.013 92.317 1.00152.97 ATOM 2 CA PHE N 19 -34.099 47.657 93.582 1.00163.77 ATOM 3 C PHE N 19 -34.686 46.937 94.777 1.00174.37 ATOM 4 O PHE N 19 -33.999 46.786 95.788 1.00173.76 ATOM 5 CB PHE N 19 -34.567 49.116 93.593 1.00145.91 ATOM 6 N VAL N 20 -35.942 46.507 94.668 1.00175.87 ATOM 7 CA VAL N 20 -36.754 46.039 95.792 1.00173.01 ATOM 8 C VAL N 20 -36.029 44.928 96.566 1.00178.66 ATOM 9 O VAL N 20 -36.114 44.845 97.807 1.00183.44 ATOM 10 CB VAL N 20 -38.134 45.578 95.278 1.00166.66 ATOM 11 N GLN N 21 -35.281 44.080 95.851 1.00177.88 ATOM 12 CA GLN N 21 -34.594 42.976 96.518 1.00180.14 ATOM 13 C GLN N 21 -33.471 43.522 97.417 1.00182.81 ATOM 14 O GLN N 21 -33.327 43.110 98.586 1.00180.83 ATOM 15 CB GLN N 21 -34.117 41.979 95.450 1.00176.96 ATOM 16 N THR N 22 -32.762 44.566 96.932 1.00180.29 ATOM 17 CA THR N 22 -31.725 45.222 97.740 1.00181.31 ATOM 18 C THR N 22 -32.342 46.013 98.897 1.00186.16 ATOM 19 O THR N 22 -31.769 46.056 99.997 1.00185.24 ATOM 20 CB THR N 22 -30.832 46.106 96.857 1.00175.71 ATOM 21 N CYS N 23 -33.546 46.590 98.689 1.00187.92 ATOM 22 CA CYS N 23 -34.163 47.398 99.750 1.00182.39 ATOM 23 C CYS N 23 -34.536 46.499 100.923 1.00185.15 ATOM 24 O CYS N 23 -34.141 46.764 102.076 1.00187.20 ATOM 25 CB CYS N 23 -35.370 48.201 99.224 1.00172.23 ATOM 26 N ARG N 24 -35.159 45.345 100.614 1.00183.72 ATOM 27 CA ARG N 24 -35.516 44.370 101.651 1.00178.51 ATOM 28 C ARG N 24 -34.297 43.804 102.359 1.00179.08 ATOM 29 O ARG N 24 -34.326 43.584 103.579 1.00178.68 ATOM 30 CB ARG N 24 -36.325 43.217 101.058 1.00174.05 ATOM 31 N GLU N 25 -33.274 43.424 101.582 1.00182.17 ATOM 32 CA GLU N 25 -32.065 42.836 102.156 1.00184.34 ATOM 33 C GLU N 25 -31.436 43.768 103.180 1.00183.73 ATOM 34 O GLU N 25 -31.062 43.336 104.278 1.00181.13 ATOM 35 CB GLU N 25 -31.050 42.525 101.059 1.00178.08 ATOM 36 N GLU N 26 -31.213 45.033 102.788 1.00181.46 ATOM 37 CA GLU N 26 -30.857 46.078 103.748 1.00183.20 ATOM 38 C GLU N 26 -31.781 46.075 104.969 1.00189.30 ATOM 39 O GLU N 26 -31.322 46.216 106.110 1.00188.97 ATOM 40 CB GLU N 26 -30.913 47.441 103.058 1.00174.74 ATOM 41 N HIS N 27 -33.099 46.019 104.744 1.00189.92 ATOM 42 CA HIS N 27 -34.031 46.116 105.855 1.00186.88 ATOM 43 C HIS N 27 -34.057 44.848 106.705 1.00184.97 ATOM 44 O HIS N 27 -34.768 44.823 107.711 1.00183.79 ATOM 45 CB HIS N 27 -35.430 46.420 105.320 1.00180.84 ATOM 46 N LYS N 28 -33.345 43.798 106.324 1.00181.61 ATOM 47 CA LYS N 28 -33.323 42.575 107.135 1.00179.83 ATOM 48 C LYS N 28 -32.756 42.835 108.548 1.00179.47 ATOM 49 O LYS N 28 -33.210 42.224 109.528 1.00170.50 ATOM 50 CB LYS N 28 -32.557 41.503 106.353 1.00175.64 ATOM 51 N LYS N 29 -31.816 43.774 108.690 1.00185.54 ATOM 52 CA LYS N 29 -31.348 44.228 110.009 1.00186.91 ATOM 53 C LYS N 29 -32.067 45.487 110.528 1.00187.98 ATOM 54 O LYS N 29 -32.182 45.652 111.744 1.00185.07 ATOM 55 CB LYS N 29 -29.837 44.485 109.999 1.00181.64 ATOM 56 N LYS N 30 -32.589 46.357 109.645 1.00188.18 ATOM 57 CA LYS N 30 -33.462 47.467 110.030 1.00184.78 ATOM 58 C LYS N 30 -34.636 46.982 110.873 1.00182.70 ATOM 59 O LYS N 30 -34.811 47.401 112.021 1.00180.64 ATOM 60 CB LYS N 30 -33.985 48.206 108.795 1.00174.38 ATOM 61 N HIS N 31 -35.511 46.177 110.293 1.00179.03 ATOM 62 CA HIS N 31 -36.458 45.410 111.092 1.00174.68 ATOM 63 C HIS N 31 -35.748 44.189 111.664 1.00176.04 ATOM 64 O HIS N 31 -35.453 43.261 110.903 1.00179.56 ATOM 65 CB HIS N 31 -37.645 44.949 110.251 1.00179.62 ATOM 66 N PRO N 32 -35.542 44.094 112.986 1.00174.54 ATOM 67 CA PRO N 32 -34.683 43.019 113.529 1.00178.37 ATOM 68 C PRO N 32 -35.050 41.607 113.089 1.00175.48 ATOM 69 O PRO N 32 -34.178 40.856 112.628 1.00173.59 ATOM 70 CB PRO N 32 -34.848 43.216 115.033 1.00163.65 ATOM 71 N ASP N 33 -36.310 41.209 113.239 1.00171.34 ATOM 72 CA ASP N 33 -36.681 39.855 112.854 1.00168.99 ATOM 73 C ASP N 33 -38.077 39.783 112.240 1.00171.80 ATOM 74 O ASP N 33 -38.642 38.687 112.144 1.00171.14 ATOM 75 CB ASP N 33 -36.586 38.923 114.071 1.00158.17 ATOM 76 N ALA N 34 -38.645 40.902 111.795 1.00171.95 ATOM 77 CA ALA N 34 -40.006 40.892 111.271 1.00171.98 ATOM 78 C ALA N 34 -40.062 40.377 109.833 1.00170.15 ATOM 79 O ALA N 34 -39.189 40.676 109.015 1.00170.25 ATOM 80 CB ALA N 34 -40.613 42.295 111.336 1.00162.42 ATOM 81 N SER N 35 -41.107 39.610 109.527 1.00161.57 ATOM 82 CA SER N 35 -41.452 39.253 108.154 1.00153.31 ATOM 83 C SER N 35 -42.444 40.285 107.639 1.00150.94 ATOM 84 O SER N 35 -43.591 40.293 108.079 1.00150.14 ATOM 85 CB SER N 35 -42.067 37.858 108.102 1.00152.18 ATOM 86 N VAL N 36 -42.022 41.135 106.690 1.00152.75 ATOM 87 CA VAL N 36 -42.814 42.301 106.300 1.00149.49 ATOM 88 C VAL N 36 -43.876 41.905 105.273 1.00147.75 ATOM 89 O VAL N 36 -43.754 40.915 104.537 1.00137.68 ATOM 90 CB VAL N 36 -41.913 43.426 105.758 1.00146.25 ATOM 91 N ASN N 37 -44.942 42.706 105.233 1.00148.20 ATOM 92 CA ASN N 37 -46.102 42.544 104.364 1.00147.90 ATOM 93 C ASN N 37 -45.766 42.843 102.905 1.00154.82 ATOM 94 O ASN N 37 -44.868 43.626 102.601 1.00161.27 ATOM 95 CB ASN N 37 -47.217 43.483 104.827 1.00142.54 ATOM 96 CG ASN N 37 -48.543 43.167 104.188 1.00148.13 ATOM 97 OD1 ASN N 37 -48.712 42.102 103.589 1.00155.88 ATOM 98 ND2 ASN N 37 -49.507 44.077 104.331 1.00141.97 ATOM 99 N PHE N 38 -46.545 42.241 101.996 1.00149.47 ATOM 100 CA PHE N 38 -46.339 42.487 100.580 1.00146.51 ATOM 101 C PHE N 38 -46.799 43.883 100.208 1.00151.63 ATOM 102 O PHE N 38 -46.003 44.673 99.682 1.00156.18 ATOM 103 CB PHE N 38 -47.053 41.425 99.749 1.00147.66 ATOM 104 CG PHE N 38 -46.152 40.298 99.335 1.00152.81 ATOM 105 CD1 PHE N 38 -46.420 39.485 98.247 1.00147.96 ATOM 106 CD2 PHE N 38 -44.994 40.053 100.048 1.00152.26 ATOM 107 CE1 PHE N 38 -45.539 38.458 97.894 1.00145.89 ATOM 108 CE2 PHE N 38 -44.130 39.026 99.692 1.00149.16 ATOM 109 CZ PHE N 38 -44.403 38.243 98.617 1.00146.78 ATOM 110 N SER N 39 -48.056 44.231 100.508 1.00147.78 ATOM 111 CA SER N 39 -48.581 45.563 100.187 1.00151.81 ATOM 112 C SER N 39 -47.691 46.688 100.720 1.00159.82 ATOM 113 O SER N 39 -47.296 47.587 99.958 1.00163.57 ATOM 114 CB SER N 39 -49.986 45.701 100.760 1.00147.84 ATOM 115 N GLU N 40 -47.530 46.752 102.061 1.00160.47 ATOM 116 CA GLU N 40 -46.749 47.816 102.691 1.00158.30 ATOM 117 C GLU N 40 -45.315 47.876 102.140 1.00160.61 ATOM 118 O GLU N 40 -44.776 48.975 101.936 1.00168.19 ATOM 119 CB GLU N 40 -46.738 47.604 104.199 1.00160.70 ATOM 120 N PHE N 41 -44.624 46.721 102.016 1.00162.85 ATOM 121 CA PHE N 41 -43.267 46.748 101.456 1.00164.51 ATOM 122 C PHE N 41 -43.254 47.346 100.043 1.00170.12 ATOM 123 O PHE N 41 -42.351 48.135 99.700 1.00175.98 ATOM 124 CB PHE N 41 -42.666 45.345 101.462 1.00162.58 ATOM 125 N SER N 42 -44.179 46.896 99.172 1.00169.77 ATOM 126 CA SER N 42 -44.319 47.537 97.864 1.00172.14 ATOM 127 C SER N 42 -44.482 49.059 98.017 1.00181.08 ATOM 128 O SER N 42 -43.853 49.845 97.275 1.00185.00 ATOM 129 CB SER N 42 -45.460 46.878 97.111 1.00167.69 ATOM 130 N LYS N 43 -45.271 49.501 99.023 1.00180.78 ATOM 131 CA LYS N 43 -45.506 50.943 99.175 1.00174.45 ATOM 132 C LYS N 43 -44.200 51.658 99.553 1.00178.69 ATOM 133 O LYS N 43 -43.911 52.744 99.025 1.00181.30 ATOM 134 CB LYS N 43 -46.650 51.194 100.167 1.00162.75 ATOM 135 N LYS N 44 -43.342 51.004 100.380 1.00180.36 ATOM 136 CA LYS N 44 -42.131 51.685 100.872 1.00179.34 ATOM 137 C LYS N 44 -41.064 51.762 99.775 1.00180.69 ATOM 138 O LYS N 44 -40.436 52.826 99.572 1.00185.33 ATOM 139 CB LYS N 44 -41.580 50.996 102.126 1.00173.30 ATOM 140 N CYS N 45 -40.848 50.636 99.053 1.00179.98 ATOM 141 CA CYS N 45 -39.872 50.636 97.967 1.00181.63 ATOM 142 C CYS N 45 -40.267 51.650 96.911 1.00185.03 ATOM 143 O CYS N 45 -39.418 52.401 96.401 1.00185.17 ATOM 144 CB CYS N 45 -39.733 49.254 97.357 1.00177.47 ATOM 145 N SER N 46 -41.558 51.647 96.542 1.00185.29 ATOM 146 CA SER N 46 -42.134 52.702 95.709 1.00188.86 ATOM 147 C SER N 46 -41.785 54.093 96.201 1.00190.86 ATOM 148 O SER N 46 -41.497 54.984 95.395 1.00192.42 ATOM 149 CB SER N 46 -43.648 52.591 95.705 1.00186.79 ATOM 150 N GLU N 47 -41.999 54.345 97.499 1.00188.83 ATOM 151 CA GLU N 47 -41.957 55.710 98.011 1.00186.21 ATOM 152 C GLU N 47 -40.551 56.306 97.970 1.00191.84 ATOM 153 O GLU N 47 -40.409 57.539 97.870 1.00197.59 ATOM 154 CB GLU N 47 -42.508 55.736 99.438 1.00183.23 ATOM 155 N ARG N 48 -39.525 55.478 98.130 1.00189.12 ATOM 156 CA ARG N 48 -38.167 55.954 97.902 1.00187.35 ATOM 157 C ARG N 48 -37.897 56.306 96.421 1.00189.79 ATOM 158 O ARG N 48 -38.298 57.380 95.934 1.00185.55 ATOM 159 CB ARG N 48 -37.165 54.897 98.399 1.00173.84 TER