HEADER RECOMBINATION/DNA 31-DEC-69 6CIM TITLE Pre-Reaction Complex, RAG1(E962Q)/2-nicked/intact 12/23RSS complex in TITLE 2 Mn2+ COMPND MOL_ID: 3; COMPND 2 MOLECULE: High mobility group protein B1; COMPND 3 CHAIN: N; COMPND 4 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 3.60 ANGSTORMS DBREF 6CIM N 1 163 UNP P09429 HMGB1_HUMAN 1 163 SEQRES 1 N 30 PHE VAL GLN THR CYS ARG GLU GLU HIS LYS LYS LYS HIS SEQRES 2 N 30 PRO ASP ALA SER VAL ASN PHE SER GLU PHE SER LYS LYS SEQRES 3 N 30 CYS SER GLU ARG ATOM 1 N PHE N 19 -35.320 46.656 92.358 1.00171.53 ATOM 2 CA PHE N 19 -34.963 47.364 93.581 1.00182.43 ATOM 3 C PHE N 19 -35.546 46.672 94.808 1.00187.53 ATOM 4 O PHE N 19 -34.842 46.492 95.800 1.00187.22 ATOM 5 CB PHE N 19 -35.439 48.822 93.519 1.00163.93 ATOM 6 N VAL N 20 -36.817 46.253 94.697 1.00188.93 ATOM 7 CA VAL N 20 -37.591 45.732 95.823 1.00186.93 ATOM 8 C VAL N 20 -36.854 44.640 96.603 1.00192.22 ATOM 9 O VAL N 20 -36.896 44.627 97.843 1.00198.70 ATOM 10 CB VAL N 20 -38.965 45.244 95.333 1.00181.06 ATOM 11 N GLN N 21 -36.171 43.718 95.912 1.00189.60 ATOM 12 CA GLN N 21 -35.396 42.688 96.607 1.00192.10 ATOM 13 C GLN N 21 -34.338 43.302 97.497 1.00191.19 ATOM 14 O GLN N 21 -34.168 42.880 98.645 1.00193.63 ATOM 15 CB GLN N 21 -34.730 41.739 95.613 1.00192.33 ATOM 16 N THR N 22 -33.600 44.280 96.974 1.00187.14 ATOM 17 CA THR N 22 -32.541 44.894 97.759 1.00189.71 ATOM 18 C THR N 22 -33.112 45.629 98.960 1.00200.01 ATOM 19 O THR N 22 -32.575 45.501 100.063 1.00196.43 ATOM 20 CB THR N 22 -31.713 45.838 96.888 1.00182.96 ATOM 21 N CYS N 23 -34.203 46.386 98.752 1.00205.15 ATOM 22 CA CYS N 23 -34.915 47.068 99.831 1.00194.63 ATOM 23 C CYS N 23 -35.293 46.095 100.925 1.00195.08 ATOM 24 O CYS N 23 -35.056 46.349 102.112 1.00193.97 ATOM 25 CB CYS N 23 -36.180 47.743 99.300 1.00180.95 ATOM 26 N ARG N 24 -35.890 44.972 100.546 1.00194.08 ATOM 27 CA ARG N 24 -36.315 44.028 101.562 1.00194.08 ATOM 28 C ARG N 24 -35.107 43.391 102.229 1.00198.67 ATOM 29 O ARG N 24 -35.090 43.196 103.451 1.00200.16 ATOM 30 CB ARG N 24 -37.237 42.972 100.957 1.00190.19 ATOM 31 N GLU N 25 -34.058 43.099 101.457 1.00199.43 ATOM 32 CA GLU N 25 -32.856 42.554 102.077 1.00200.44 ATOM 33 C GLU N 25 -32.271 43.541 103.083 1.00205.51 ATOM 34 O GLU N 25 -31.884 43.149 104.187 1.00202.69 ATOM 35 CB GLU N 25 -31.826 42.151 101.022 1.00192.58 ATOM 36 N GLU N 26 -32.261 44.834 102.755 1.00199.77 ATOM 37 CA GLU N 26 -31.742 45.818 103.700 1.00194.34 ATOM 38 C GLU N 26 -32.615 45.867 104.952 1.00198.10 ATOM 39 O GLU N 26 -32.105 45.874 106.080 1.00196.78 ATOM 40 CB GLU N 26 -31.635 47.194 103.041 1.00186.01 ATOM 41 N HIS N 27 -33.941 45.834 104.768 1.00198.95 ATOM 42 CA HIS N 27 -34.904 45.840 105.867 1.00198.71 ATOM 43 C HIS N 27 -34.925 44.555 106.712 1.00197.13 ATOM 44 O HIS N 27 -35.628 44.550 107.727 1.00196.06 ATOM 45 CB HIS N 27 -36.315 46.106 105.330 1.00193.64 ATOM 46 N LYS N 28 -34.246 43.470 106.309 1.00197.06 ATOM 47 CA LYS N 28 -34.188 42.267 107.152 1.00194.10 ATOM 48 C LYS N 28 -33.665 42.557 108.554 1.00194.33 ATOM 49 O LYS N 28 -33.995 41.842 109.509 1.00178.50 ATOM 50 CB LYS N 28 -33.292 41.207 106.515 1.00188.26 ATOM 51 N LYS N 29 -32.787 43.539 108.679 1.00203.64 ATOM 52 CA LYS N 29 -32.262 43.920 109.974 1.00202.31 ATOM 53 C LYS N 29 -32.993 45.122 110.520 1.00202.88 ATOM 54 O LYS N 29 -33.023 45.319 111.738 1.00198.15 ATOM 55 CB LYS N 29 -30.769 44.235 109.872 1.00197.79 ATOM 56 N LYS N 30 -33.562 45.939 109.630 1.00205.18 ATOM 57 CA LYS N 30 -34.311 47.107 110.072 1.00200.22 ATOM 58 C LYS N 30 -35.487 46.655 110.922 1.00195.32 ATOM 59 O LYS N 30 -35.631 47.039 112.089 1.00187.76 ATOM 60 CB LYS N 30 -34.767 47.927 108.861 1.00188.56 ATOM 61 N HIS N 31 -36.310 45.799 110.355 1.00195.42 ATOM 62 CA HIS N 31 -37.281 45.057 111.131 1.00190.05 ATOM 63 C HIS N 31 -36.582 43.813 111.664 1.00190.28 ATOM 64 O HIS N 31 -36.176 42.933 110.890 1.00186.18 ATOM 65 CB HIS N 31 -38.502 44.712 110.280 1.00192.32 ATOM 66 N PRO N 32 -36.387 43.744 112.982 1.00192.13 ATOM 67 CA PRO N 32 -35.510 42.703 113.546 1.00195.65 ATOM 68 C PRO N 32 -35.863 41.275 113.117 1.00192.38 ATOM 69 O PRO N 32 -34.977 40.548 112.649 1.00191.24 ATOM 70 CB PRO N 32 -35.659 42.941 115.060 1.00182.39 ATOM 71 N ASP N 33 -37.139 40.865 113.211 1.00185.10 ATOM 72 CA ASP N 33 -37.506 39.501 112.838 1.00179.80 ATOM 73 C ASP N 33 -38.905 39.401 112.237 1.00184.60 ATOM 74 O ASP N 33 -39.476 38.304 112.198 1.00180.64 ATOM 75 CB ASP N 33 -37.417 38.569 114.044 1.00169.88 ATOM 76 N ALA N 34 -39.463 40.513 111.767 1.00185.90 ATOM 77 CA ALA N 34 -40.833 40.546 111.277 1.00185.47 ATOM 78 C ALA N 34 -40.915 40.053 109.837 1.00184.98 ATOM 79 O ALA N 34 -40.036 40.335 109.017 1.00183.90 ATOM 80 CB ALA N 34 -41.383 41.969 111.372 1.00179.07 ATOM 81 N SER N 35 -41.978 39.310 109.534 1.00182.43 ATOM 82 CA SER N 35 -42.303 38.938 108.162 1.00176.40 ATOM 83 C SER N 35 -43.333 39.942 107.654 1.00170.75 ATOM 84 O SER N 35 -44.477 39.956 108.126 1.00160.99 ATOM 85 CB SER N 35 -42.830 37.509 108.098 1.00167.48 ATOM 86 N VAL N 36 -42.922 40.781 106.689 1.00172.07 ATOM 87 CA VAL N 36 -43.672 41.981 106.319 1.00165.21 ATOM 88 C VAL N 36 -44.739 41.648 105.282 1.00164.94 ATOM 89 O VAL N 36 -44.675 40.638 104.574 1.00162.21 ATOM 90 CB VAL N 36 -42.726 43.090 105.814 1.00159.30 ATOM 91 N ASN N 37 -45.724 42.536 105.189 1.00160.50 ATOM 92 CA ASN N 37 -46.894 42.305 104.356 1.00161.65 ATOM 93 C ASN N 37 -46.551 42.549 102.898 1.00161.66 ATOM 94 O ASN N 37 -45.583 43.233 102.572 1.00167.94 ATOM 95 CB ASN N 37 -48.038 43.229 104.795 1.00160.05 ATOM 96 CG ASN N 37 -49.357 42.921 104.106 1.00161.90 ATOM 97 OD1 ASN N 37 -49.534 41.842 103.532 1.00168.46 ATOM 98 ND2 ASN N 37 -50.296 43.869 104.168 1.00149.23 ATOM 99 N PHE N 38 -47.344 41.964 102.012 1.00156.83 ATOM 100 CA PHE N 38 -47.101 42.183 100.594 1.00154.13 ATOM 101 C PHE N 38 -47.610 43.550 100.176 1.00158.81 ATOM 102 O PHE N 38 -46.919 44.305 99.483 1.00163.36 ATOM 103 CB PHE N 38 -47.743 41.060 99.774 1.00170.42 ATOM 104 N SER N 39 -48.812 43.900 100.612 1.00155.41 ATOM 105 CA SER N 39 -49.379 45.175 100.195 1.00165.56 ATOM 106 C SER N 39 -48.584 46.357 100.751 1.00176.50 ATOM 107 O SER N 39 -48.264 47.313 100.030 1.00171.05 ATOM 108 CB SER N 39 -50.850 45.264 100.613 1.00161.85 ATOM 109 N GLU N 40 -48.210 46.288 102.025 1.00181.02 ATOM 110 CA GLU N 40 -47.541 47.426 102.657 1.00173.25 ATOM 111 C GLU N 40 -46.098 47.563 102.198 1.00172.21 ATOM 112 O GLU N 40 -45.585 48.676 102.047 1.00174.71 ATOM 113 CB GLU N 40 -47.595 47.295 104.176 1.00177.53 ATOM 114 N PHE N 41 -45.431 46.436 101.975 1.00180.08 ATOM 115 CA PHE N 41 -44.057 46.447 101.480 1.00182.38 ATOM 116 C PHE N 41 -43.979 46.994 100.061 1.00183.78 ATOM 117 O PHE N 41 -43.022 47.692 99.704 1.00183.59 ATOM 118 CB PHE N 41 -43.470 45.035 101.530 1.00174.68 ATOM 119 N SER N 42 -44.974 46.658 99.231 1.00184.61 ATOM 120 CA SER N 42 -45.111 47.257 97.904 1.00185.27 ATOM 121 C SER N 42 -45.236 48.764 97.987 1.00189.11 ATOM 122 O SER N 42 -44.549 49.493 97.266 1.00196.27 ATOM 123 CB SER N 42 -46.347 46.697 97.207 1.00190.30 ATOM 124 N LYS N 43 -46.142 49.232 98.858 1.00190.72 ATOM 125 CA LYS N 43 -46.342 50.661 99.106 1.00188.46 ATOM 126 C LYS N 43 -45.052 51.360 99.510 1.00191.79 ATOM 127 O LYS N 43 -44.772 52.466 99.039 1.00192.08 ATOM 128 CB LYS N 43 -47.397 50.844 100.194 1.00179.21 ATOM 129 N LYS N 44 -44.265 50.726 100.385 1.00197.20 ATOM 130 CA LYS N 44 -43.037 51.327 100.900 1.00193.78 ATOM 131 C LYS N 44 -41.961 51.390 99.838 1.00194.96 ATOM 132 O LYS N 44 -41.334 52.434 99.647 1.00194.19 ATOM 133 CB LYS N 44 -42.531 50.553 102.115 1.00187.73 ATOM 134 N CYS N 45 -41.738 50.284 99.132 1.00197.89 ATOM 135 CA CYS N 45 -40.774 50.311 98.040 1.00200.13 ATOM 136 C CYS N 45 -41.225 51.296 96.975 1.00196.88 ATOM 137 O CYS N 45 -40.415 52.034 96.406 1.00192.30 ATOM 138 CB CYS N 45 -40.577 48.913 97.447 1.00190.06 ATOM 139 N SER N 46 -42.535 51.376 96.752 1.00197.39 ATOM 140 CA SER N 46 -43.071 52.354 95.822 1.00198.99 ATOM 141 C SER N 46 -42.756 53.767 96.285 1.00203.36 ATOM 142 O SER N 46 -42.290 54.588 95.495 1.00205.74 ATOM 143 CB SER N 46 -44.579 52.173 95.662 1.00204.79 ATOM 144 N GLU N 47 -42.948 54.051 97.579 1.00203.18 ATOM 145 CA GLU N 47 -42.853 55.421 98.086 1.00195.37 ATOM 146 C GLU N 47 -41.432 55.990 98.029 1.00200.48 ATOM 147 O GLU N 47 -41.271 57.213 97.962 1.00204.10 ATOM 148 CB GLU N 47 -43.382 55.483 99.520 1.00191.49 ATOM 149 N ARG N 48 -40.398 55.143 98.066 1.00202.85 ATOM 150 CA ARG N 48 -39.006 55.592 97.923 1.00197.52 ATOM 151 C ARG N 48 -38.699 55.946 96.471 1.00199.85 ATOM 152 O ARG N 48 -39.117 56.992 95.984 1.00200.98 ATOM 153 CB ARG N 48 -38.017 54.537 98.424 1.00181.89 TER