HEADER HYDROLASE/DNA/RNA 31-DEC-69 6CVT TITLE Human Aprataxin (Aptx) V263G bound to RNA-DNA, AMP and Zn product TITLE 2 complex COMPND MOL_ID: 1; COMPND 2 MOLECULE: Aprataxin; COMPND 3 CHAIN: A, B; COMPND 4 MUTATION: YES; COMPND 5 EC: 3.1.11.7,3.1.12.2; COMPND 6 FRAGMENT: Aprataxin catalytic ; COMPND 7 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.94 ANGSTORMS DBREF 6CVT A 165 342 UNP Q7Z2E3 APTX_HUMAN 179 356 SEQRES 1 A 25 PRO LEU ARG CYS HIS GLU CYS GLN GLN LEU LEU PRO SER SEQRES 2 A 25 ILE PRO GLN LEU LYS GLU HIS LEU ARG LYS HIS TRP ATOM 1 N PRO A 316 8.058 -10.371 -32.768 1.00 66.08 ATOM 2 CA PRO A 316 7.392 -10.970 -33.931 1.00 61.18 ATOM 3 C PRO A 316 7.434 -12.488 -33.883 1.00 57.71 ATOM 4 O PRO A 316 8.349 -13.091 -33.317 1.00 55.47 ATOM 5 CB PRO A 316 8.198 -10.432 -35.117 1.00 67.32 ATOM 6 CG PRO A 316 8.864 -9.194 -34.595 1.00 69.81 ATOM 7 CD PRO A 316 9.160 -9.477 -33.161 1.00 69.27 ATOM 8 N LEU A 317 6.433 -13.101 -34.512 1.00 59.12 ATOM 9 CA LEU A 317 6.305 -14.553 -34.526 1.00 52.88 ATOM 10 C LEU A 317 7.456 -15.204 -35.278 1.00 52.21 ATOM 11 O LEU A 317 7.681 -14.916 -36.457 1.00 56.62 ATOM 12 CB LEU A 317 4.976 -14.954 -35.160 1.00 42.89 ATOM 13 CG LEU A 317 3.715 -14.324 -34.582 1.00 41.66 ATOM 14 CD1 LEU A 317 2.481 -14.971 -35.173 1.00 40.54 ATOM 15 CD2 LEU A 317 3.705 -14.418 -33.073 1.00 48.55 ATOM 16 N ARG A 318 8.168 -16.106 -34.606 1.00 51.77 ATOM 17 CA ARG A 318 9.198 -16.915 -35.243 1.00 57.73 ATOM 18 C ARG A 318 8.969 -18.379 -34.910 1.00 64.99 ATOM 19 O ARG A 318 8.816 -18.733 -33.737 1.00 65.86 ATOM 20 CB ARG A 318 10.596 -16.498 -34.801 1.00 61.29 ATOM 21 CG ARG A 318 11.691 -17.316 -35.445 1.00 65.00 ATOM 22 CD ARG A 318 13.060 -16.879 -34.950 1.00 72.12 ATOM 23 NE ARG A 318 13.368 -15.497 -35.310 1.00 76.34 ATOM 24 CZ ARG A 318 13.983 -15.142 -36.434 1.00 82.50 ATOM 25 NH1 ARG A 318 14.349 -16.066 -37.308 1.00 86.63 ATOM 26 NH2 ARG A 318 14.228 -13.865 -36.692 1.00 85.57 ATOM 27 N CYS A 319 8.953 -19.223 -35.942 1.00 74.97 ATOM 28 CA CYS A 319 8.717 -20.646 -35.748 1.00 73.77 ATOM 29 C CYS A 319 9.848 -21.260 -34.939 1.00 71.04 ATOM 30 O CYS A 319 11.020 -20.940 -35.144 1.00 73.85 ATOM 31 CB CYS A 319 8.599 -21.349 -37.099 1.00 76.66 ATOM 32 SG CYS A 319 8.573 -23.148 -36.964 1.00 78.19 ATOM 33 N HIS A 320 9.493 -22.175 -34.035 1.00 65.69 ATOM 34 CA HIS A 320 10.487 -22.797 -33.167 1.00 65.75 ATOM 35 C HIS A 320 11.242 -23.944 -33.828 1.00 63.77 ATOM 36 O HIS A 320 12.289 -24.351 -33.314 1.00 59.16 ATOM 37 CB HIS A 320 9.819 -23.283 -31.880 1.00 61.65 ATOM 38 CG HIS A 320 8.790 -24.349 -32.093 1.00 59.02 ATOM 39 ND1 HIS A 320 7.657 -24.148 -32.852 1.00 58.95 ATOM 40 CD2 HIS A 320 8.711 -25.618 -31.625 1.00 58.38 ATOM 41 CE1 HIS A 320 6.927 -25.250 -32.849 1.00 58.06 ATOM 42 NE2 HIS A 320 7.544 -26.157 -32.113 1.00 59.13 ATOM 43 N GLU A 321 10.747 -24.460 -34.950 1.00 66.40 ATOM 44 CA GLU A 321 11.412 -25.549 -35.650 1.00 69.90 ATOM 45 C GLU A 321 12.271 -24.997 -36.783 1.00 75.46 ATOM 46 O GLU A 321 13.503 -25.005 -36.699 1.00 80.63 ATOM 47 CB GLU A 321 10.382 -26.561 -36.184 1.00 72.56 ATOM 48 CG GLU A 321 9.387 -27.092 -35.157 1.00 75.64 ATOM 49 CD GLU A 321 9.873 -28.328 -34.412 1.00 83.13 ATOM 50 OE1 GLU A 321 11.076 -28.413 -34.070 1.00 87.51 ATOM 51 OE2 GLU A 321 9.029 -29.212 -34.151 1.00 84.17 ATOM 52 N CYS A 322 11.618 -24.551 -37.862 1.00 76.93 ATOM 53 CA CYS A 322 12.327 -24.082 -39.047 1.00 78.27 ATOM 54 C CYS A 322 13.068 -22.770 -38.807 1.00 79.69 ATOM 55 O CYS A 322 14.073 -22.507 -39.477 1.00 84.63 ATOM 56 CB CYS A 322 11.355 -23.932 -40.212 1.00 80.96 ATOM 57 SG CYS A 322 10.284 -22.482 -40.098 1.00 83.91 ATOM 58 N GLN A 323 12.578 -21.935 -37.889 1.00 76.84 ATOM 59 CA GLN A 323 13.114 -20.612 -37.486 1.00 75.01 ATOM 60 C GLN A 323 12.725 -19.482 -38.430 1.00 69.19 ATOM 61 O GLN A 323 13.315 -18.392 -38.347 1.00 73.13 ATOM 62 CB GLN A 323 14.636 -20.596 -37.331 1.00 80.88 ATOM 63 CG GLN A 323 15.145 -21.497 -36.221 1.00 85.15 ATOM 64 CD GLN A 323 14.746 -20.996 -34.850 1.00 85.59 ATOM 65 OE1 GLN A 323 14.695 -19.787 -34.609 1.00 84.83 ATOM 66 NE2 GLN A 323 14.452 -21.924 -33.942 1.00 83.95 ATOM 67 N GLN A 324 11.743 -19.688 -39.301 1.00 63.41 ATOM 68 CA GLN A 324 11.281 -18.646 -40.208 1.00 66.94 ATOM 69 C GLN A 324 10.367 -17.664 -39.486 1.00 67.34 ATOM 70 O GLN A 324 9.545 -18.054 -38.656 1.00 69.08 ATOM 71 CB GLN A 324 10.548 -19.271 -41.386 1.00 75.71 ATOM 72 CG GLN A 324 10.024 -18.313 -42.436 1.00 81.93 ATOM 73 CD GLN A 324 8.942 -18.967 -43.284 1.00 82.25 ATOM 74 OE1 GLN A 324 9.022 -20.159 -43.584 1.00 81.79 ATOM 75 NE2 GLN A 324 7.933 -18.195 -43.679 1.00 81.32 ATOM 76 N LEU A 325 10.502 -16.382 -39.816 1.00 73.19 ATOM 77 CA LEU A 325 9.601 -15.365 -39.286 1.00 70.17 ATOM 78 C LEU A 325 8.240 -15.480 -39.958 1.00 70.43 ATOM 79 O LEU A 325 8.148 -15.727 -41.164 1.00 75.50 ATOM 80 CB LEU A 325 10.191 -13.972 -39.517 1.00 65.65 ATOM 81 CG LEU A 325 11.439 -13.655 -38.702 1.00 62.44 ATOM 82 CD1 LEU A 325 12.124 -12.401 -39.189 1.00 65.97 ATOM 83 CD2 LEU A 325 10.989 -13.481 -37.268 1.00 62.65 ATOM 84 N LEU A 326 7.182 -15.289 -39.180 1.00 66.73 ATOM 85 CA LEU A 326 5.820 -15.387 -39.676 1.00 67.96 ATOM 86 C LEU A 326 4.996 -14.163 -39.295 1.00 70.32 ATOM 87 O LEU A 326 5.289 -13.487 -38.296 1.00 72.78 ATOM 88 CB LEU A 326 5.163 -16.669 -39.136 1.00 66.28 ATOM 89 CG LEU A 326 5.670 -17.919 -39.869 1.00 63.68 ATOM 90 CD1 LEU A 326 5.191 -19.167 -39.199 1.00 62.63 ATOM 91 CD2 LEU A 326 5.269 -17.907 -41.330 1.00 62.71 ATOM 92 N PRO A 327 3.957 -13.848 -40.083 1.00 65.99 ATOM 93 CA PRO A 327 3.234 -12.579 -39.923 1.00 62.57 ATOM 94 C PRO A 327 1.986 -12.606 -39.054 1.00 53.51 ATOM 95 O PRO A 327 1.493 -11.531 -38.682 1.00 59.76 ATOM 96 CB PRO A 327 2.851 -12.241 -41.366 1.00 65.49 ATOM 97 CG PRO A 327 2.589 -13.595 -41.969 1.00 64.48 ATOM 98 CD PRO A 327 3.540 -14.560 -41.305 1.00 64.57 ATOM 99 N SER A 328 1.438 -13.770 -38.747 1.00 44.77 ATOM 100 CA SER A 328 0.159 -13.808 -38.061 1.00 46.84 ATOM 101 C SER A 328 -0.048 -15.178 -37.433 1.00 53.07 ATOM 102 O SER A 328 0.532 -16.183 -37.857 1.00 55.92 ATOM 103 CB SER A 328 -0.997 -13.495 -39.015 1.00 49.99 ATOM 104 OG SER A 328 -1.212 -14.580 -39.914 1.00 53.49 ATOM 105 N ILE A 329 -0.905 -15.193 -36.418 1.00 48.19 ATOM 106 CA ILE A 329 -1.297 -16.450 -35.795 1.00 44.03 ATOM 107 C ILE A 329 -1.900 -17.420 -36.813 1.00 50.92 ATOM 108 O ILE A 329 -1.564 -18.613 -36.765 1.00 53.38 ATOM 109 CB ILE A 329 -2.221 -16.181 -34.599 1.00 41.96 ATOM 110 CG1 ILE A 329 -1.434 -15.500 -33.469 1.00 40.28 ATOM 111 CG2 ILE A 329 -2.905 -17.463 -34.125 1.00 43.79 ATOM 112 CD1 ILE A 329 -0.285 -16.323 -32.924 1.00 35.97 ATOM 113 N PRO A 330 -2.791 -16.997 -37.720 1.00 53.14 ATOM 114 CA PRO A 330 -3.291 -17.971 -38.710 1.00 56.22 ATOM 115 C PRO A 330 -2.195 -18.530 -39.601 1.00 60.11 ATOM 116 O PRO A 330 -2.116 -19.753 -39.811 1.00 63.36 ATOM 117 CB PRO A 330 -4.322 -17.156 -39.503 1.00 52.86 ATOM 118 CG PRO A 330 -4.770 -16.102 -38.548 1.00 50.13 ATOM 119 CD PRO A 330 -3.535 -15.728 -37.795 1.00 51.09 ATOM 120 N GLN A 331 -1.314 -17.666 -40.098 1.00 60.17 ATOM 121 CA GLN A 331 -0.237 -18.146 -40.951 1.00 64.34 ATOM 122 C GLN A 331 0.788 -18.953 -40.158 1.00 62.03 ATOM 123 O GLN A 331 1.402 -19.882 -40.702 1.00 58.33 ATOM 124 CB GLN A 331 0.401 -16.959 -41.668 1.00 66.49 ATOM 125 CG GLN A 331 -0.585 -16.300 -42.615 1.00 67.40 ATOM 126 CD GLN A 331 0.024 -15.193 -43.427 1.00 65.05 ATOM 127 OE1 GLN A 331 -0.418 -14.049 -43.359 1.00 61.94 ATOM 128 NE2 GLN A 331 1.034 -15.524 -44.217 1.00 66.90 ATOM 129 N LEU A 332 0.960 -18.639 -38.870 1.00 56.84 ATOM 130 CA LEU A 332 1.828 -19.452 -38.025 1.00 49.56 ATOM 131 C LEU A 332 1.270 -20.852 -37.836 1.00 51.02 ATOM 132 O LEU A 332 2.009 -21.834 -37.951 1.00 52.37 ATOM 133 CB LEU A 332 2.000 -18.798 -36.661 1.00 48.04 ATOM 134 CG LEU A 332 2.720 -19.660 -35.615 1.00 47.31 ATOM 135 CD1 LEU A 332 4.147 -19.991 -36.012 1.00 50.50 ATOM 136 CD2 LEU A 332 2.654 -19.030 -34.224 1.00 48.71 ATOM 137 N LYS A 333 -0.031 -20.962 -37.552 1.00 52.45 ATOM 138 CA LYS A 333 -0.651 -22.273 -37.394 1.00 46.66 ATOM 139 C LYS A 333 -0.529 -23.088 -38.669 1.00 55.86 ATOM 140 O LYS A 333 -0.145 -24.261 -38.629 1.00 61.86 ATOM 141 CB LYS A 333 -2.116 -22.124 -36.986 1.00 44.62 ATOM 142 CG LYS A 333 -2.345 -21.575 -35.578 1.00 42.33 ATOM 143 CD LYS A 333 -3.827 -21.290 -35.351 1.00 43.66 ATOM 144 CE LYS A 333 -4.146 -20.914 -33.923 1.00 42.59 ATOM 145 NZ LYS A 333 -3.997 -22.082 -33.006 1.00 45.43 ATOM 146 N GLU A 334 -0.870 -22.488 -39.814 1.00 64.25 ATOM 147 CA GLU A 334 -0.724 -23.216 -41.071 1.00 71.22 ATOM 148 C GLU A 334 0.723 -23.653 -41.295 1.00 66.98 ATOM 149 O GLU A 334 0.977 -24.778 -41.738 1.00 73.12 ATOM 150 CB GLU A 334 -1.235 -22.368 -42.238 1.00 85.50 ATOM 151 CG GLU A 334 -2.746 -22.092 -42.202 1.00 95.88 ATOM 152 CD GLU A 334 -3.600 -23.359 -42.317 1.00102.45 ATOM 153 OE1 GLU A 334 -3.189 -24.308 -43.031 1.00104.19 ATOM 154 OE2 GLU A 334 -4.686 -23.401 -41.690 1.00101.84 ATOM 155 N HIS A 335 1.687 -22.788 -40.971 1.00 62.56 ATOM 156 CA HIS A 335 3.091 -23.159 -41.123 1.00 58.59 ATOM 157 C HIS A 335 3.446 -24.330 -40.217 1.00 57.57 ATOM 158 O HIS A 335 4.199 -25.230 -40.614 1.00 56.20 ATOM 159 CB HIS A 335 3.976 -21.949 -40.837 1.00 60.15 ATOM 160 CG HIS A 335 5.417 -22.284 -40.592 1.00 65.84 ATOM 161 ND1 HIS A 335 6.302 -22.576 -41.609 1.00 70.28 ATOM 162 CD2 HIS A 335 6.129 -22.363 -39.442 1.00 66.50 ATOM 163 CE1 HIS A 335 7.493 -22.827 -41.095 1.00 70.09 ATOM 164 NE2 HIS A 335 7.417 -22.702 -39.782 1.00 66.11 ATOM 165 N LEU A 336 2.891 -24.352 -39.004 1.00 59.33 ATOM 166 CA LEU A 336 3.160 -25.458 -38.096 1.00 58.05 ATOM 167 C LEU A 336 2.575 -26.752 -38.637 1.00 61.57 ATOM 168 O LEU A 336 3.220 -27.800 -38.553 1.00 66.36 ATOM 169 CB LEU A 336 2.599 -25.160 -36.705 1.00 52.43 ATOM 170 CG LEU A 336 3.216 -23.999 -35.916 1.00 45.95 ATOM 171 CD1 LEU A 336 2.656 -23.923 -34.506 1.00 37.31 ATOM 172 CD2 LEU A 336 4.725 -24.140 -35.867 1.00 50.42 ATOM 173 N ARG A 337 1.369 -26.686 -39.227 1.00 63.73 ATOM 174 CA ARG A 337 0.718 -27.877 -39.779 1.00 68.97 ATOM 175 C ARG A 337 1.693 -28.709 -40.591 1.00 74.01 ATOM 176 O ARG A 337 1.721 -29.939 -40.484 1.00 76.73 ATOM 177 CB ARG A 337 -0.480 -27.497 -40.664 1.00 75.05 ATOM 178 CG ARG A 337 -1.609 -26.704 -39.993 1.00 82.06 ATOM 179 CD ARG A 337 -2.532 -27.571 -39.141 1.00 86.66 ATOM 180 NE ARG A 337 -3.604 -26.786 -38.526 1.00 93.58 ATOM 181 CZ ARG A 337 -3.521 -26.208 -37.327 1.00103.68 ATOM 182 NH1 ARG A 337 -2.412 -26.325 -36.599 1.00106.37 ATOM 183 NH2 ARG A 337 -4.547 -25.511 -36.848 1.00105.60 ATOM 184 N LYS A 338 2.522 -28.053 -41.386 1.00 80.46 ATOM 185 CA LYS A 338 3.390 -28.780 -42.291 1.00 88.16 ATOM 186 C LYS A 338 4.574 -29.433 -41.590 1.00 87.38 ATOM 187 O LYS A 338 5.252 -30.259 -42.203 1.00 88.49 ATOM 188 CB LYS A 338 3.815 -27.823 -43.406 1.00 93.26 ATOM 189 CG LYS A 338 2.574 -27.358 -44.167 1.00 95.19 ATOM 190 CD LYS A 338 2.800 -26.215 -45.112 1.00101.61 ATOM 191 CE LYS A 338 1.464 -25.783 -45.708 1.00105.98 ATOM 192 NZ LYS A 338 1.609 -24.638 -46.651 1.00110.86 ATOM 193 N HIS A 339 4.824 -29.123 -40.325 1.00 88.11 ATOM 194 CA HIS A 339 5.914 -29.753 -39.598 1.00 87.32 ATOM 195 C HIS A 339 5.509 -31.075 -38.957 1.00 85.20 ATOM 196 O HIS A 339 6.245 -31.580 -38.103 1.00 85.17 ATOM 197 CB HIS A 339 6.444 -28.824 -38.508 1.00 82.88 ATOM 198 CG HIS A 339 7.508 -27.884 -38.975 1.00 81.01 ATOM 199 ND1 HIS A 339 8.848 -28.206 -38.975 1.00 80.91 ATOM 200 CD2 HIS A 339 7.427 -26.606 -39.414 1.00 80.31 ATOM 201 CE1 HIS A 339 9.542 -27.177 -39.432 1.00 81.35 ATOM 202 NE2 HIS A 339 8.705 -26.185 -39.685 1.00 80.71 ATOM 203 N TRP A 340 4.360 -31.637 -39.320 1.00 81.73 ATOM 204 CA TRP A 340 3.901 -32.851 -38.653 1.00 78.57 ATOM 205 C TRP A 340 4.564 -34.074 -39.269 1.00 70.90 ATOM 206 O TRP A 340 4.725 -34.145 -40.483 1.00 70.51 ATOM 207 CB TRP A 340 2.374 -32.989 -38.727 1.00 83.35 ATOM 208 CG TRP A 340 1.506 -31.906 -38.047 1.00 85.63 ATOM 209 CD1 TRP A 340 0.139 -31.800 -38.145 1.00 84.16 ATOM 210 CD2 TRP A 340 1.924 -30.812 -37.191 1.00 88.60 ATOM 211 NE1 TRP A 340 -0.314 -30.726 -37.414 1.00 83.35 ATOM 212 CE2 TRP A 340 0.754 -30.103 -36.822 1.00 85.74 ATOM 213 CE3 TRP A 340 3.163 -30.365 -36.699 1.00 94.75 ATOM 214 CZ2 TRP A 340 0.787 -28.973 -35.990 1.00 87.63 ATOM 215 CZ3 TRP A 340 3.191 -29.231 -35.870 1.00 94.78 ATOM 216 CH2 TRP A 340 2.009 -28.553 -35.532 1.00 90.25 TER