HEADER HYDROLASE/DNA/RNA 31-DEC-69 6CVT TITLE Human Aprataxin (Aptx) V263G bound to RNA-DNA, AMP and Zn product TITLE 2 complex COMPND MOL_ID: 1; COMPND 2 MOLECULE: Aprataxin; COMPND 3 CHAIN: A, B; COMPND 4 MUTATION: YES; COMPND 5 EC: 3.1.11.7,3.1.12.2; COMPND 6 FRAGMENT: Aprataxin catalytic ; COMPND 7 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.94 ANGSTORMS DBREF 6CVT B 165 342 UNP Q7Z2E3 APTX_HUMAN 179 356 SEQRES 1 B 24 PRO LEU ARG CYS HIS GLU CYS GLN GLN LEU LEU PRO SER SEQRES 2 B 24 ILE PRO GLN LEU LYS GLU HIS LEU ARG LYS HIS ATOM 1 N PRO B 316 27.463 18.453 2.571 1.00100.82 ATOM 2 CA PRO B 316 26.637 18.191 3.756 1.00 97.80 ATOM 3 C PRO B 316 25.206 18.671 3.564 1.00 94.95 ATOM 4 O PRO B 316 24.923 19.571 2.765 1.00 90.39 ATOM 5 CB PRO B 316 27.339 18.984 4.866 1.00101.85 ATOM 6 CG PRO B 316 28.734 19.166 4.378 1.00107.16 ATOM 7 CD PRO B 316 28.626 19.296 2.890 1.00106.40 ATOM 8 N LEU B 317 24.303 18.048 4.318 1.00 94.39 ATOM 9 CA LEU B 317 22.882 18.354 4.251 1.00 91.61 ATOM 10 C LEU B 317 22.627 19.795 4.671 1.00100.12 ATOM 11 O LEU B 317 22.696 20.126 5.859 1.00104.38 ATOM 12 CB LEU B 317 22.088 17.385 5.133 1.00 85.07 ATOM 13 CG LEU B 317 22.324 15.895 4.862 1.00 77.14 ATOM 14 CD1 LEU B 317 21.385 15.029 5.694 1.00 73.91 ATOM 15 CD2 LEU B 317 22.175 15.578 3.374 1.00 72.38 ATOM 16 N ARG B 318 22.355 20.660 3.698 1.00104.73 ATOM 17 CA ARG B 318 21.945 22.035 3.949 1.00113.11 ATOM 18 C ARG B 318 20.463 22.163 3.642 1.00113.33 ATOM 19 O ARG B 318 20.051 22.011 2.486 1.00109.22 ATOM 20 CB ARG B 318 22.732 23.030 3.098 1.00118.99 ATOM 21 CG ARG B 318 24.211 23.018 3.332 1.00125.29 ATOM 22 CD ARG B 318 24.871 24.217 2.674 1.00130.85 ATOM 23 NE ARG B 318 26.240 24.392 3.153 1.00136.14 ATOM 24 CZ ARG B 318 27.102 25.275 2.659 1.00137.76 ATOM 25 NH1 ARG B 318 26.739 26.070 1.659 1.00137.72 ATOM 26 NH2 ARG B 318 28.327 25.355 3.164 1.00139.23 ATOM 27 N CYS B 319 19.675 22.451 4.672 1.00118.98 ATOM 28 CA CYS B 319 18.259 22.715 4.483 1.00122.82 ATOM 29 C CYS B 319 18.040 23.803 3.437 1.00128.46 ATOM 30 O CYS B 319 18.741 24.818 3.422 1.00135.12 ATOM 31 CB CYS B 319 17.642 23.144 5.809 1.00123.90 ATOM 32 SG CYS B 319 15.977 23.721 5.602 1.00118.29 ATOM 33 N HIS B 320 17.013 23.620 2.601 1.00126.27 ATOM 34 CA HIS B 320 16.722 24.581 1.543 1.00127.44 ATOM 35 C HIS B 320 15.967 25.803 2.049 1.00129.67 ATOM 36 O HIS B 320 15.964 26.830 1.364 1.00131.29 ATOM 37 CB HIS B 320 15.915 23.910 0.425 1.00126.72 ATOM 38 CG HIS B 320 14.557 23.440 0.853 1.00128.57 ATOM 39 ND1 HIS B 320 14.372 22.487 1.833 1.00128.06 ATOM 40 CD2 HIS B 320 13.317 23.793 0.434 1.00128.26 ATOM 41 CE1 HIS B 320 13.078 22.274 1.998 1.00127.10 ATOM 42 NE2 HIS B 320 12.416 23.052 1.161 1.00126.82 ATOM 43 N GLU B 321 15.379 25.728 3.247 1.00132.05 ATOM 44 CA GLU B 321 14.631 26.836 3.829 1.00131.59 ATOM 45 C GLU B 321 15.511 27.647 4.778 1.00132.94 ATOM 46 O GLU B 321 15.979 28.742 4.446 1.00131.77 ATOM 47 CB GLU B 321 13.404 26.306 4.599 1.00127.31 ATOM 48 CG GLU B 321 12.506 25.357 3.827 1.00120.81 ATOM 49 CD GLU B 321 11.466 26.088 3.021 1.00123.13 ATOM 50 OE1 GLU B 321 11.809 27.137 2.434 1.00125.11 ATOM 51 OE2 GLU B 321 10.309 25.615 2.974 1.00122.83 ATOM 52 N CYS B 322 15.714 27.098 5.975 1.00133.57 ATOM 53 CA CYS B 322 16.451 27.771 7.038 1.00138.73 ATOM 54 C CYS B 322 17.957 27.879 6.771 1.00137.44 ATOM 55 O CYS B 322 18.587 28.860 7.192 1.00141.65 ATOM 56 CB CYS B 322 16.157 27.049 8.350 1.00143.93 ATOM 57 SG CYS B 322 16.856 25.405 8.414 1.00142.33 ATOM 58 N GLN B 323 18.553 26.878 6.115 1.00133.82 ATOM 59 CA GLN B 323 19.987 26.720 5.769 1.00133.10 ATOM 60 C GLN B 323 20.780 26.042 6.894 1.00131.33 ATOM 61 O GLN B 323 21.989 25.797 6.728 1.00122.99 ATOM 62 CB GLN B 323 20.676 28.043 5.385 1.00134.64 ATOM 63 CG GLN B 323 22.045 27.879 4.691 1.00132.12 ATOM 64 CD GLN B 323 22.072 28.438 3.284 1.00130.14 ATOM 65 OE1 GLN B 323 21.067 28.953 2.783 1.00127.95 ATOM 66 NE2 GLN B 323 23.230 28.346 2.637 1.00130.85 ATOM 67 N GLN B 324 20.139 25.684 8.004 1.00136.82 ATOM 68 CA GLN B 324 20.819 24.970 9.080 1.00140.22 ATOM 69 C GLN B 324 21.428 23.668 8.564 1.00139.14 ATOM 70 O GLN B 324 20.818 22.944 7.774 1.00140.44 ATOM 71 CB GLN B 324 19.843 24.679 10.223 1.00142.02 ATOM 72 CG GLN B 324 20.454 23.968 11.425 1.00146.48 ATOM 73 CD GLN B 324 19.407 23.301 12.303 1.00146.98 ATOM 74 OE1 GLN B 324 18.314 23.837 12.491 1.00149.39 ATOM 75 NE2 GLN B 324 19.733 22.123 12.838 1.00144.34 ATOM 76 N LEU B 325 22.647 23.369 9.009 1.00136.94 ATOM 77 CA LEU B 325 23.261 22.087 8.696 1.00126.09 ATOM 78 C LEU B 325 22.655 20.994 9.567 1.00121.80 ATOM 79 O LEU B 325 22.342 21.218 10.740 1.00125.65 ATOM 80 CB LEU B 325 24.773 22.136 8.916 1.00123.47 ATOM 81 CG LEU B 325 25.607 23.044 8.013 1.00119.45 ATOM 82 CD1 LEU B 325 27.034 23.148 8.541 1.00122.43 ATOM 83 CD2 LEU B 325 25.588 22.555 6.576 1.00109.05 ATOM 84 N LEU B 326 22.459 19.820 8.979 1.00113.22 ATOM 85 CA LEU B 326 21.974 18.672 9.723 1.00108.28 ATOM 86 C LEU B 326 22.867 17.469 9.474 1.00107.28 ATOM 87 O LEU B 326 23.505 17.373 8.422 1.00107.05 ATOM 88 CB LEU B 326 20.519 18.328 9.382 1.00101.13 ATOM 89 CG LEU B 326 19.513 19.197 10.131 1.00102.80 ATOM 90 CD1 LEU B 326 19.276 20.557 9.475 1.00104.12 ATOM 91 CD2 LEU B 326 18.234 18.430 10.304 1.00100.00 ATOM 92 N PRO B 327 22.933 16.540 10.431 1.00105.11 ATOM 93 CA PRO B 327 23.912 15.453 10.352 1.00 99.97 ATOM 94 C PRO B 327 23.431 14.177 9.676 1.00 91.44 ATOM 95 O PRO B 327 24.275 13.324 9.357 1.00 87.96 ATOM 96 CB PRO B 327 24.224 15.203 11.833 1.00104.46 ATOM 97 CG PRO B 327 22.928 15.494 12.517 1.00106.26 ATOM 98 CD PRO B 327 22.255 16.581 11.736 1.00107.15 ATOM 99 N SER B 328 22.130 14.010 9.437 1.00 88.43 ATOM 100 CA SER B 328 21.669 12.736 8.902 1.00 82.92 ATOM 101 C SER B 328 20.309 12.885 8.233 1.00 76.19 ATOM 102 O SER B 328 19.520 13.775 8.553 1.00 74.80 ATOM 103 CB SER B 328 21.594 11.664 9.992 1.00 81.96 ATOM 104 OG SER B 328 20.502 11.902 10.858 1.00 83.25 ATOM 105 N ILE B 329 20.045 11.950 7.318 1.00 74.87 ATOM 106 CA ILE B 329 18.744 11.914 6.646 1.00 77.63 ATOM 107 C ILE B 329 17.588 11.805 7.628 1.00 86.42 ATOM 108 O ILE B 329 16.598 12.539 7.464 1.00 92.85 ATOM 109 CB ILE B 329 18.738 10.813 5.577 1.00 69.69 ATOM 110 CG1 ILE B 329 19.671 11.192 4.424 1.00 62.14 ATOM 111 CG2 ILE B 329 17.334 10.553 5.065 1.00 67.53 ATOM 112 CD1 ILE B 329 19.280 12.455 3.709 1.00 55.13 ATOM 113 N PRO B 330 17.618 10.941 8.657 1.00 89.04 ATOM 114 CA PRO B 330 16.481 10.926 9.594 1.00 88.58 ATOM 115 C PRO B 330 16.279 12.254 10.305 1.00 91.58 ATOM 116 O PRO B 330 15.138 12.724 10.425 1.00 99.60 ATOM 117 CB PRO B 330 16.844 9.799 10.569 1.00 89.39 ATOM 118 CG PRO B 330 17.746 8.915 9.795 1.00 87.44 ATOM 119 CD PRO B 330 18.568 9.853 8.957 1.00 89.30 ATOM 120 N GLN B 331 17.362 12.887 10.763 1.00 89.69 ATOM 121 CA GLN B 331 17.223 14.176 11.429 1.00 92.25 ATOM 122 C GLN B 331 16.814 15.273 10.458 1.00 93.93 ATOM 123 O GLN B 331 16.138 16.225 10.856 1.00100.64 ATOM 124 CB GLN B 331 18.526 14.560 12.131 1.00 91.23 ATOM 125 CG GLN B 331 18.879 13.653 13.289 1.00 91.62 ATOM 126 CD GLN B 331 20.114 14.111 14.032 1.00 94.67 ATOM 127 OE1 GLN B 331 21.096 13.375 14.133 1.00 91.49 ATOM 128 NE2 GLN B 331 20.071 15.327 14.561 1.00101.08 ATOM 129 N LEU B 332 17.203 15.166 9.189 1.00 85.68 ATOM 130 CA LEU B 332 16.732 16.142 8.215 1.00 79.24 ATOM 131 C LEU B 332 15.229 15.996 7.991 1.00 73.51 ATOM 132 O LEU B 332 14.514 16.998 7.880 1.00 72.22 ATOM 133 CB LEU B 332 17.520 16.010 6.915 1.00 74.48 ATOM 134 CG LEU B 332 17.102 16.954 5.797 1.00 70.75 ATOM 135 CD1 LEU B 332 17.297 18.376 6.277 1.00 73.32 ATOM 136 CD2 LEU B 332 17.941 16.695 4.569 1.00 66.40 ATOM 137 N LYS B 333 14.735 14.755 7.928 1.00 73.45 ATOM 138 CA LYS B 333 13.295 14.529 7.831 1.00 82.63 ATOM 139 C LYS B 333 12.573 15.126 9.036 1.00101.63 ATOM 140 O LYS B 333 11.593 15.874 8.890 1.00103.13 ATOM 141 CB LYS B 333 13.001 13.028 7.738 1.00 75.44 ATOM 142 CG LYS B 333 13.486 12.334 6.475 1.00 72.73 ATOM 143 CD LYS B 333 13.312 10.813 6.604 1.00 70.76 ATOM 144 CE LYS B 333 13.672 10.049 5.323 1.00 62.40 ATOM 145 NZ LYS B 333 12.731 10.256 4.192 1.00 54.32 ATOM 146 N GLU B 334 13.062 14.811 10.242 1.00111.00 ATOM 147 CA GLU B 334 12.469 15.351 11.463 1.00120.29 ATOM 148 C GLU B 334 12.469 16.880 11.458 1.00125.86 ATOM 149 O GLU B 334 11.485 17.512 11.865 1.00126.80 ATOM 150 CB GLU B 334 13.227 14.811 12.678 1.00125.05 ATOM 151 CG GLU B 334 12.723 15.301 14.034 1.00137.03 ATOM 152 CD GLU B 334 11.542 14.495 14.544 1.00141.05 ATOM 153 OE1 GLU B 334 11.359 13.352 14.064 1.00137.37 ATOM 154 OE2 GLU B 334 10.799 15.004 15.417 1.00146.41 ATOM 155 N HIS B 335 13.564 17.490 10.992 1.00134.80 ATOM 156 CA HIS B 335 13.662 18.948 10.916 1.00130.57 ATOM 157 C HIS B 335 12.642 19.520 9.957 1.00134.03 ATOM 158 O HIS B 335 12.047 20.573 10.215 1.00132.35 ATOM 159 CB HIS B 335 15.074 19.324 10.460 1.00119.54 ATOM 160 CG HIS B 335 15.228 20.719 9.919 1.00125.36 ATOM 161 ND1 HIS B 335 16.181 21.593 10.399 1.00134.24 ATOM 162 CD2 HIS B 335 14.620 21.360 8.890 1.00131.98 ATOM 163 CE1 HIS B 335 16.118 22.726 9.723 1.00140.59 ATOM 164 NE2 HIS B 335 15.181 22.610 8.797 1.00145.43 ATOM 165 N LEU B 336 12.461 18.857 8.817 1.00135.48 ATOM 166 CA LEU B 336 11.528 19.350 7.816 1.00133.66 ATOM 167 C LEU B 336 10.086 19.223 8.282 1.00140.01 ATOM 168 O LEU B 336 9.238 20.032 7.885 1.00144.21 ATOM 169 CB LEU B 336 11.750 18.612 6.496 1.00119.41 ATOM 170 CG LEU B 336 13.116 18.855 5.842 1.00110.77 ATOM 171 CD1 LEU B 336 13.168 18.231 4.463 1.00105.58 ATOM 172 CD2 LEU B 336 13.445 20.341 5.779 1.00111.20 ATOM 173 N ARG B 337 9.795 18.223 9.121 1.00142.27 ATOM 174 CA ARG B 337 8.463 18.035 9.688 1.00142.54 ATOM 175 C ARG B 337 7.875 19.332 10.241 1.00143.41 ATOM 176 O ARG B 337 6.657 19.524 10.195 1.00145.54 ATOM 177 CB ARG B 337 8.500 16.974 10.794 1.00146.98 ATOM 178 CG ARG B 337 8.326 15.530 10.328 1.00148.03 ATOM 179 CD ARG B 337 8.536 14.544 11.489 1.00153.20 ATOM 180 NE ARG B 337 7.710 14.852 12.661 1.00159.19 ATOM 181 CZ ARG B 337 6.689 14.110 13.085 1.00160.80 ATOM 182 NH1 ARG B 337 6.359 12.998 12.438 1.00157.79 ATOM 183 NH2 ARG B 337 6.001 14.475 14.162 1.00165.42 ATOM 184 N LYS B 338 8.722 20.228 10.754 1.00145.88 ATOM 185 CA LYS B 338 8.259 21.448 11.404 1.00142.27 ATOM 186 C LYS B 338 8.155 22.637 10.461 1.00141.24 ATOM 187 O LYS B 338 7.545 23.647 10.829 1.00145.39 ATOM 188 CB LYS B 338 9.193 21.827 12.556 1.00137.26 ATOM 189 CG LYS B 338 9.299 20.806 13.666 1.00130.82 ATOM 190 CD LYS B 338 10.437 21.197 14.580 1.00130.87 ATOM 191 CE LYS B 338 10.688 20.172 15.653 1.00130.62 ATOM 192 NZ LYS B 338 11.829 20.631 16.489 1.00135.57 ATOM 193 N HIS B 339 8.681 22.528 9.250 1.00135.56 ATOM 194 CA HIS B 339 8.638 23.631 8.309 1.00135.24 ATOM 195 C HIS B 339 7.265 23.666 7.642 1.00131.07 ATOM 196 O HIS B 339 7.100 24.157 6.526 1.00127.57 ATOM 197 CB HIS B 339 9.746 23.493 7.257 1.00134.35 ATOM 198 CG HIS B 339 11.033 24.164 7.631 1.00136.02 ATOM 199 ND1 HIS B 339 11.266 25.493 7.350 1.00135.94 ATOM 200 CD2 HIS B 339 12.174 23.688 8.195 1.00136.89 ATOM 201 CE1 HIS B 339 12.471 25.825 7.780 1.00138.84 ATOM 202 NE2 HIS B 339 13.057 24.745 8.274 1.00139.71 TER