HEADER Hydrolase/Hydrolase Inhibitor 31-DEC-69 6CYM TITLE Reversible Covalent Direct Thrombin Inhibitors COMPND MOL_ID: 2; COMPND 2 MOLECULE: Prothrombin; COMPND 3 CHAIN: B, D; COMPND 4 EC: 3.4.21.5; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.90 ANGSTORMS DBREF 6CYM D 1 28 UNP P00734 THRB_HUMAN 334 361 SEQRES 1 D 28 ALA ASP CYS GLY LEU ARG PRO LEU PHE GLU LYS LYS SER SEQRES 2 D 28 LEU GLU ASP LYS THR GLU ARG GLU LEU LEU GLU SER TYR SEQRES 3 D 28 ILE ASP ATOM 1 N ALA D 1 37.885 6.817 37.778 1.00114.10 ATOM 2 CA ALA D 1 39.300 6.753 38.171 1.00115.96 ATOM 3 C ALA D 1 39.843 8.096 38.695 1.00115.34 ATOM 4 O ALA D 1 40.526 8.130 39.721 1.00114.03 ATOM 5 CB ALA D 1 40.150 6.257 37.008 1.00121.34 ATOM 6 N ASP D 2 39.539 9.189 37.980 1.00109.43 ATOM 7 CA ASP D 2 39.939 10.560 38.308 1.00105.68 ATOM 8 C ASP D 2 38.682 11.449 38.159 1.00103.67 ATOM 9 O ASP D 2 38.747 12.664 37.933 1.00100.93 ATOM 10 CB ASP D 2 41.074 10.976 37.368 1.00109.99 ATOM 11 CG ASP D 2 41.635 12.350 37.619 1.00120.63 ATOM 12 OD1 ASP D 2 42.262 12.552 38.693 1.00120.67 ATOM 13 OD2 ASP D 2 41.463 13.217 36.742 1.00125.71 ATOM 14 N CYS D 3 37.529 10.789 38.328 1.00 97.81 ATOM 15 CA CYS D 3 36.175 11.303 38.247 1.00 93.65 ATOM 16 C CYS D 3 35.894 12.436 39.223 1.00 91.80 ATOM 17 O CYS D 3 36.641 12.643 40.183 1.00 90.68 ATOM 18 CB CYS D 3 35.196 10.153 38.460 1.00 95.72 ATOM 19 SG CYS D 3 35.327 9.362 40.087 1.00100.21 ATOM 20 N GLY D 4 34.763 13.101 38.997 1.00 85.12 ATOM 21 CA GLY D 4 34.221 14.166 39.831 1.00 81.47 ATOM 22 C GLY D 4 35.121 15.352 40.081 1.00 83.71 ATOM 23 O GLY D 4 34.888 16.113 41.026 1.00 81.92 ATOM 24 N LEU D 5 36.146 15.515 39.243 1.00 80.30 ATOM 25 CA LEU D 5 37.097 16.605 39.342 1.00 79.17 ATOM 26 C LEU D 5 37.049 17.314 38.023 1.00 82.78 ATOM 27 O LEU D 5 37.709 16.903 37.056 1.00 85.10 ATOM 28 CB LEU D 5 38.501 16.068 39.646 1.00 81.56 ATOM 29 CG LEU D 5 38.739 15.689 41.097 1.00 85.62 ATOM 30 CD1 LEU D 5 39.555 14.418 41.183 1.00 89.40 ATOM 31 CD2 LEU D 5 39.409 16.822 41.825 1.00 85.01 ATOM 32 N ARG D 6 36.196 18.345 37.965 1.00 76.25 ATOM 33 CA ARG D 6 35.953 19.121 36.752 1.00 75.37 ATOM 34 C ARG D 6 37.217 19.770 36.181 1.00 79.01 ATOM 35 O ARG D 6 37.885 20.532 36.886 1.00 77.42 ATOM 36 CB ARG D 6 34.842 20.150 36.967 1.00 71.45 ATOM 37 CG ARG D 6 33.508 19.526 37.312 1.00 69.98 ATOM 38 CD ARG D 6 32.484 20.576 37.642 1.00 66.53 ATOM 39 NE ARG D 6 32.840 21.232 38.894 1.00 74.76 ATOM 40 CZ ARG D 6 32.306 22.363 39.337 1.00 90.35 ATOM 41 NH1 ARG D 6 31.372 22.988 38.627 1.00 81.12 ATOM 42 NH2 ARG D 6 32.704 22.883 40.493 1.00 73.77 ATOM 43 N PRO D 7 37.559 19.453 34.908 1.00 77.45 ATOM 44 CA PRO D 7 38.768 20.019 34.295 1.00 79.44 ATOM 45 C PRO D 7 38.811 21.540 34.249 1.00 84.48 ATOM 46 O PRO D 7 39.886 22.114 34.380 1.00 85.78 ATOM 47 CB PRO D 7 38.776 19.399 32.900 1.00 83.37 ATOM 48 CG PRO D 7 37.984 18.150 33.048 1.00 87.80 ATOM 49 CD PRO D 7 36.887 18.537 33.971 1.00 80.22 ATOM 50 N LEU D 8 37.651 22.194 34.126 1.00 80.25 ATOM 51 CA LEU D 8 37.634 23.647 34.085 1.00 79.24 ATOM 52 C LEU D 8 37.470 24.275 35.479 1.00 78.56 ATOM 53 O LEU D 8 37.759 25.463 35.634 1.00 77.28 ATOM 54 CB LEU D 8 36.599 24.157 33.062 1.00 79.36 ATOM 55 CG LEU D 8 36.984 23.884 31.583 1.00 86.97 ATOM 56 CD1 LEU D 8 35.855 24.205 30.655 1.00 88.42 ATOM 57 CD2 LEU D 8 38.213 24.679 31.148 1.00 89.30 ATOM 58 N PHE D 9 37.120 23.461 36.504 1.00 73.36 ATOM 59 CA PHE D 9 36.938 23.950 37.876 1.00 72.16 ATOM 60 C PHE D 9 37.944 23.353 38.877 1.00 79.19 ATOM 61 O PHE D 9 38.997 23.974 39.106 1.00 80.19 ATOM 62 CB PHE D 9 35.485 23.785 38.334 1.00 72.00 ATOM 63 CG PHE D 9 34.567 24.710 37.560 1.00 72.93 ATOM 64 CD1 PHE D 9 34.386 26.030 37.960 1.00 75.72 ATOM 65 CD2 PHE D 9 33.934 24.280 36.399 1.00 73.73 ATOM 66 CE1 PHE D 9 33.592 26.903 37.209 1.00 76.32 ATOM 67 CE2 PHE D 9 33.136 25.153 35.654 1.00 76.52 ATOM 68 CZ PHE D 9 32.976 26.460 36.061 1.00 74.81 ATOM 69 N GLU D 10 37.645 22.152 39.439 1.00 75.36 ATOM 70 CA GLU D 10 38.493 21.433 40.415 1.00 75.45 ATOM 71 C GLU D 10 39.972 21.218 40.010 1.00 78.96 ATOM 72 O GLU D 10 40.834 21.262 40.888 1.00 77.96 ATOM 73 CB GLU D 10 37.869 20.089 40.797 1.00 76.73 ATOM 74 CG GLU D 10 36.860 20.211 41.914 1.00 87.24 ATOM 75 CD GLU D 10 35.616 20.973 41.520 1.00116.30 ATOM 76 OE1 GLU D 10 35.452 22.126 41.981 1.00120.64 ATOM 77 OE2 GLU D 10 34.867 20.460 40.659 1.00112.71 ATOM 78 N LYS D 11 40.254 20.963 38.710 1.00 77.03 ATOM 79 CA LYS D 11 41.622 20.780 38.170 1.00 79.13 ATOM 80 C LYS D 11 42.297 22.139 38.017 1.00 82.81 ATOM 81 O LYS D 11 43.372 22.328 38.567 1.00 83.67 ATOM 82 CB LYS D 11 41.627 20.025 36.826 1.00 82.68 ATOM 83 CG LYS D 11 40.834 18.717 36.836 1.00 98.24 ATOM 84 CD LYS D 11 41.588 17.542 37.431 1.00106.09 ATOM 85 CE LYS D 11 41.848 16.455 36.403 1.00110.34 ATOM 86 NZ LYS D 11 40.632 15.699 35.976 1.00116.03 ATOM 87 N LYS D 12 41.629 23.111 37.350 1.00 78.70 ATOM 88 CA LYS D 12 42.130 24.480 37.155 1.00 79.04 ATOM 89 C LYS D 12 42.167 25.314 38.463 1.00 83.40 ATOM 90 O LYS D 12 42.677 26.440 38.445 1.00 82.73 ATOM 91 CB LYS D 12 41.341 25.197 36.038 1.00 80.65 ATOM 92 CG LYS D 12 41.803 24.804 34.638 1.00 81.99 ATOM 93 CD LYS D 12 41.278 25.693 33.518 1.00 82.90 ATOM 94 CE LYS D 12 41.925 25.270 32.208 1.00 88.12 ATOM 95 NZ LYS D 12 41.457 26.054 31.028 1.00 88.68 ATOM 96 N SER D 13 41.668 24.728 39.597 1.00 80.71 ATOM 97 CA SER D 13 41.576 25.300 40.956 1.00 80.02 ATOM 98 C SER D 13 40.638 26.523 40.994 1.00 80.15 ATOM 99 O SER D 13 41.005 27.613 41.441 1.00 79.49 ATOM 100 CB SER D 13 42.960 25.586 41.546 1.00 87.66 ATOM 101 OG SER D 13 43.733 24.409 41.727 1.00100.77 ATOM 102 N LEU D 14 39.409 26.307 40.515 1.00 75.14 ATOM 103 CA LEU D 14 38.342 27.303 40.449 1.00 75.37 ATOM 104 C LEU D 14 36.999 26.770 40.967 1.00 77.95 ATOM 105 O LEU D 14 36.686 25.593 40.767 1.00 76.09 ATOM 106 CB LEU D 14 38.171 27.783 39.008 1.00 76.63 ATOM 107 CG LEU D 14 39.221 28.742 38.507 1.00 83.74 ATOM 108 CD1 LEU D 14 39.856 28.210 37.270 1.00 85.06 ATOM 109 CD2 LEU D 14 38.615 30.101 38.229 1.00 88.15 ATOM 110 N GLU D 15 36.207 27.654 41.617 1.00 75.68 ATOM 111 CA GLU D 15 34.876 27.360 42.158 1.00 75.02 ATOM 112 C GLU D 15 33.786 27.845 41.210 1.00 79.26 ATOM 113 O GLU D 15 33.871 28.958 40.688 1.00 80.89 ATOM 114 CB GLU D 15 34.667 28.063 43.504 1.00 77.56 ATOM 115 CG GLU D 15 35.244 27.340 44.708 1.00 94.27 ATOM 116 CD GLU D 15 35.232 28.108 46.024 1.00119.57 ATOM 117 OE1 GLU D 15 34.232 28.809 46.313 1.00116.23 ATOM 118 OE2 GLU D 15 36.220 27.977 46.786 1.00112.52 ATOM 119 N ASP D 16 32.744 27.038 41.011 1.00 74.43 ATOM 120 CA ASP D 16 31.630 27.480 40.183 1.00 74.09 ATOM 121 C ASP D 16 30.771 28.454 41.015 1.00 77.03 ATOM 122 O ASP D 16 30.699 28.326 42.242 1.00 75.06 ATOM 123 CB ASP D 16 30.828 26.288 39.629 1.00 75.06 ATOM 124 CG ASP D 16 30.057 25.510 40.672 1.00 83.34 ATOM 125 OD1 ASP D 16 29.134 26.089 41.279 1.00 84.88 ATOM 126 OD2 ASP D 16 30.335 24.310 40.838 1.00 85.47 ATOM 127 N LYS D 17 30.133 29.419 40.338 1.00 74.81 ATOM 128 CA LYS D 17 29.303 30.497 40.896 1.00 75.58 ATOM 129 C LYS D 17 28.405 30.112 42.089 1.00 77.48 ATOM 130 O LYS D 17 28.160 30.988 42.927 1.00 79.06 ATOM 131 CB LYS D 17 28.452 31.166 39.792 1.00 79.25 ATOM 132 CG LYS D 17 29.243 32.151 38.917 1.00 89.66 ATOM 133 CD LYS D 17 28.414 32.661 37.720 1.00 94.30 ATOM 134 CE LYS D 17 29.132 33.735 36.922 1.00 97.22 ATOM 135 NZ LYS D 17 28.372 34.169 35.710 1.00 93.51 ATOM 136 N THR D 18 27.920 28.834 42.181 1.00 70.47 ATOM 137 CA THR D 18 27.026 28.412 43.286 1.00 68.98 ATOM 138 C THR D 18 27.481 27.173 44.110 1.00 70.92 ATOM 139 O THR D 18 26.656 26.656 44.881 1.00 71.57 ATOM 140 CB THR D 18 25.568 28.183 42.804 1.00 64.67 ATOM 141 OG1 THR D 18 25.438 26.940 42.104 1.00 51.39 ATOM 142 CG2 THR D 18 25.013 29.335 41.988 1.00 67.21 ATOM 143 N GLU D 19 28.746 26.698 43.987 1.00 63.66 ATOM 144 CA GLU D 19 29.108 25.489 44.731 1.00 61.88 ATOM 145 C GLU D 19 29.203 25.706 46.234 1.00 65.12 ATOM 146 O GLU D 19 29.002 24.743 46.977 1.00 62.83 ATOM 147 CB GLU D 19 30.357 24.775 44.187 1.00 63.09 ATOM 148 CG GLU D 19 31.640 25.585 44.133 1.00 78.76 ATOM 149 CD GLU D 19 32.862 24.763 43.759 1.00108.31 ATOM 150 OE1 GLU D 19 33.483 24.176 44.675 1.00104.36 ATOM 151 OE2 GLU D 19 33.202 24.706 42.556 1.00108.57 ATOM 152 N ARG D 20 29.447 26.958 46.692 1.00 64.55 ATOM 153 CA ARG D 20 29.543 27.241 48.133 1.00 66.56 ATOM 154 C ARG D 20 28.254 26.902 48.849 1.00 70.04 ATOM 155 O ARG D 20 28.309 26.392 49.959 1.00 70.70 ATOM 156 CB ARG D 20 29.947 28.693 48.425 1.00 74.54 ATOM 157 CG ARG D 20 30.616 28.856 49.803 1.00103.05 ATOM 158 CD ARG D 20 30.788 30.309 50.237 1.00129.21 ATOM 159 NE ARG D 20 29.552 30.887 50.785 1.00139.30 ATOM 160 CZ ARG D 20 29.436 32.140 51.220 1.00157.76 ATOM 161 NH1 ARG D 20 30.476 32.966 51.186 1.00147.91 ATOM 162 NH2 ARG D 20 28.274 32.574 51.696 1.00147.28 ATOM 163 N GLU D 21 27.095 27.149 48.192 1.00 65.34 ATOM 164 CA GLU D 21 25.751 26.864 48.692 1.00 64.25 ATOM 165 C GLU D 21 25.681 25.397 49.163 1.00 64.07 ATOM 166 O GLU D 21 25.208 25.124 50.272 1.00 65.17 ATOM 167 CB GLU D 21 24.730 27.152 47.572 1.00 65.57 ATOM 168 CG GLU D 21 23.272 26.972 47.971 1.00 80.66 ATOM 169 CD GLU D 21 22.198 27.416 46.992 1.00104.13 ATOM 170 OE1 GLU D 21 22.520 27.832 45.849 1.00 97.91 ATOM 171 OE2 GLU D 21 21.016 27.392 47.410 1.00 90.43 ATOM 172 N LEU D 22 26.219 24.477 48.336 1.00 55.46 ATOM 173 CA LEU D 22 26.260 23.043 48.599 1.00 52.90 ATOM 174 C LEU D 22 27.113 22.764 49.825 1.00 56.04 ATOM 175 O LEU D 22 26.577 22.276 50.814 1.00 57.65 ATOM 176 CB LEU D 22 26.806 22.282 47.378 1.00 51.19 ATOM 177 CG LEU D 22 25.912 21.958 46.174 1.00 54.75 ATOM 178 CD1 LEU D 22 24.714 22.875 46.045 1.00 55.38 ATOM 179 CD2 LEU D 22 26.715 21.965 44.907 1.00 54.50 ATOM 180 N LEU D 23 28.418 23.105 49.786 1.00 50.08 ATOM 181 CA LEU D 23 29.327 22.873 50.905 1.00 49.87 ATOM 182 C LEU D 23 28.823 23.524 52.217 1.00 54.92 ATOM 183 O LEU D 23 28.917 22.893 53.271 1.00 54.98 ATOM 184 CB LEU D 23 30.777 23.295 50.571 1.00 49.94 ATOM 185 CG LEU D 23 31.660 22.446 49.577 1.00 53.83 ATOM 186 CD1 LEU D 23 31.839 20.981 50.005 1.00 54.60 ATOM 187 CD2 LEU D 23 31.212 22.555 48.155 1.00 55.33 ATOM 188 N GLU D 24 28.209 24.731 52.128 1.00 52.09 ATOM 189 CA GLU D 24 27.640 25.476 53.252 1.00 54.02 ATOM 190 C GLU D 24 26.543 24.672 53.918 1.00 61.18 ATOM 191 O GLU D 24 26.442 24.715 55.134 1.00 63.71 ATOM 192 CB GLU D 24 27.017 26.798 52.782 1.00 56.89 ATOM 193 CG GLU D 24 27.857 28.054 52.934 1.00 73.25 ATOM 194 CD GLU D 24 27.124 29.353 52.620 1.00112.24 ATOM 195 OE1 GLU D 24 26.359 29.397 51.627 1.00109.19 ATOM 196 OE2 GLU D 24 27.332 30.339 53.363 1.00118.56 ATOM 197 N SER D 25 25.692 23.961 53.118 1.00 58.04 ATOM 198 CA SER D 25 24.547 23.171 53.585 1.00 58.26 ATOM 199 C SER D 25 24.943 22.024 54.521 1.00 64.41 ATOM 200 O SER D 25 24.094 21.555 55.290 1.00 67.95 ATOM 201 CB SER D 25 23.716 22.674 52.416 1.00 57.94 ATOM 202 OG SER D 25 24.286 21.497 51.879 1.00 59.10 ATOM 203 N TYR D 26 26.237 21.616 54.488 1.00 57.14 ATOM 204 CA TYR D 26 26.820 20.581 55.334 1.00 55.85 ATOM 205 C TYR D 26 27.102 21.109 56.758 1.00 59.16 ATOM 206 O TYR D 26 27.748 20.423 57.554 1.00 61.00 ATOM 207 CB TYR D 26 28.142 20.098 54.710 1.00 55.76 ATOM 208 CG TYR D 26 28.052 19.443 53.358 1.00 56.96 ATOM 209 CD1 TYR D 26 27.109 18.449 53.104 1.00 59.48 ATOM 210 CD2 TYR D 26 28.998 19.714 52.368 1.00 57.43 ATOM 211 CE1 TYR D 26 27.044 17.812 51.862 1.00 61.10 ATOM 212 CE2 TYR D 26 28.948 19.081 51.121 1.00 57.59 ATOM 213 CZ TYR D 26 27.978 18.117 50.879 1.00 68.60 ATOM 214 OH TYR D 26 27.915 17.468 49.669 1.00 71.91 ATOM 215 N ILE D 27 26.691 22.334 57.061 1.00 54.75 ATOM 216 CA ILE D 27 26.921 22.970 58.362 1.00 57.42 ATOM 217 C ILE D 27 25.572 23.535 58.904 1.00 68.12 ATOM 218 O ILE D 27 25.167 23.292 60.053 1.00 70.03 ATOM 219 CB ILE D 27 27.957 24.092 58.137 1.00 59.12 ATOM 220 CG1 ILE D 27 29.400 23.524 58.082 1.00 58.06 ATOM 221 CG2 ILE D 27 27.821 25.172 59.203 1.00 61.91 ATOM 222 CD1 ILE D 27 29.997 23.308 56.676 1.00 50.46 ATOM 223 N ASP D 28 24.906 24.296 57.990 1.00 51.12 ATOM 224 CA ASP D 28 23.669 25.037 58.109 1.00 72.37 ATOM 225 C ASP D 28 22.654 24.523 57.078 1.00100.28 ATOM 226 O ASP D 28 22.363 23.324 57.022 1.00 58.27 ATOM 227 CB ASP D 28 23.979 26.536 57.877 1.00 74.05 ATOM 228 CG ASP D 28 24.596 27.282 59.071 1.00 85.31 ATOM 229 OD1 ASP D 28 25.005 26.612 60.062 1.00 85.73 ATOM 230 OD2 ASP D 28 24.642 28.541 59.031 1.00 90.12 TER