HEADER RNA BINDING PROTEIN/RNA 31-DEC-69 6DNH TITLE Cryo-EM structure of human CPSF-160-WDR33-CPSF-30-PAS RNA complex at TITLE 2 3.4 A resolution COMPND MOL_ID: 3; COMPND 2 MOLECULE: Cleavage and polyadenylation specificity factor subunit 4; COMPND 3 CHAIN: C; COMPND 4 ENGINEERED: YES; EXPDTA ELECTRON MICROSCOPY DBREF 6DNH C 1 244 UNP O95639 CPSF4_HUMAN 1 244 SEQRES 1 C 27 MET THR LYS MET PRO GLU CYS TYR PHE TYR SER LYS PHE SEQRES 2 C 27 GLY GLU CYS SER ASN LYS GLU CYS PRO PHE LEU HIS ILE SEQRES 3 C 27 ASP ATOM 1 N MET C 90 99.842 75.829 67.636 1.00 45.24 ATOM 2 CA MET C 90 98.648 75.019 67.816 1.00 48.80 ATOM 3 C MET C 90 97.978 74.724 66.484 1.00 50.33 ATOM 4 O MET C 90 96.759 74.855 66.342 1.00 48.94 ATOM 5 CB MET C 90 97.684 75.741 68.755 1.00 64.89 ATOM 6 CG MET C 90 98.231 75.903 70.152 1.00 64.89 ATOM 7 SD MET C 90 98.466 74.282 70.882 1.00 64.89 ATOM 8 CE MET C 90 99.298 74.646 72.407 1.00 64.89 ATOM 9 N THR C 91 98.779 74.306 65.510 1.00 47.26 ATOM 10 CA THR C 91 98.321 73.854 64.208 1.00 46.19 ATOM 11 C THR C 91 98.997 72.563 63.794 1.00 43.54 ATOM 12 O THR C 91 98.500 71.894 62.885 1.00 44.45 ATOM 13 CB THR C 91 98.584 74.918 63.128 1.00 64.77 ATOM 14 OG1 THR C 91 99.970 75.276 63.135 1.00 64.77 ATOM 15 CG2 THR C 91 97.747 76.164 63.341 1.00 64.77 ATOM 16 N LYS C 92 100.106 72.189 64.431 1.00 39.10 ATOM 17 CA LYS C 92 100.824 70.957 64.143 1.00 39.93 ATOM 18 C LYS C 92 100.709 69.958 65.281 1.00 38.60 ATOM 19 O LYS C 92 101.658 69.216 65.538 1.00 37.91 ATOM 20 CB LYS C 92 102.304 71.238 63.866 1.00 57.12 ATOM 21 CG LYS C 92 102.641 71.707 62.455 1.00 57.12 ATOM 22 CD LYS C 92 102.384 73.188 62.257 1.00 57.12 ATOM 23 CE LYS C 92 102.814 73.638 60.881 1.00 57.12 ATOM 24 NZ LYS C 92 102.441 75.053 60.620 1.00 57.12 ATOM 25 N MET C 93 99.593 69.949 65.990 1.00 38.08 ATOM 26 CA MET C 93 99.414 69.020 67.080 1.00 35.22 ATOM 27 C MET C 93 99.109 67.630 66.545 1.00 34.66 ATOM 28 O MET C 93 98.722 67.476 65.387 1.00 31.40 ATOM 29 CB MET C 93 98.297 69.505 67.989 1.00 52.29 ATOM 30 CG MET C 93 98.699 70.658 68.857 1.00 52.29 ATOM 31 SD MET C 93 97.254 71.177 69.754 1.00 52.29 ATOM 32 CE MET C 93 96.400 72.042 68.437 1.00 52.29 ATOM 33 N PRO C 94 99.315 66.595 67.355 1.00 32.82 ATOM 34 CA PRO C 94 98.840 65.268 66.967 1.00 36.51 ATOM 35 C PRO C 94 97.326 65.229 66.914 1.00 37.62 ATOM 36 O PRO C 94 96.635 66.003 67.576 1.00 33.95 ATOM 37 CB PRO C 94 99.378 64.361 68.074 1.00 55.90 ATOM 38 CG PRO C 94 100.537 65.082 68.591 1.00 55.90 ATOM 39 CD PRO C 94 100.209 66.522 68.521 1.00 55.90 ATOM 40 N GLU C 95 96.814 64.328 66.088 1.00 32.73 ATOM 41 CA GLU C 95 95.381 64.102 66.043 1.00 31.50 ATOM 42 C GLU C 95 94.936 63.403 67.318 1.00 27.80 ATOM 43 O GLU C 95 95.709 62.674 67.944 1.00 26.77 ATOM 44 CB GLU C 95 95.003 63.266 64.822 1.00 43.40 ATOM 45 CG GLU C 95 95.147 63.990 63.492 1.00 43.40 ATOM 46 CD GLU C 95 96.548 63.914 62.920 1.00 43.40 ATOM 47 OE1 GLU C 95 97.408 63.241 63.525 1.00 43.40 ATOM 48 OE2 GLU C 95 96.791 64.524 61.859 1.00 43.40 ATOM 49 N CYS C 96 93.693 63.653 67.712 1.00 30.25 ATOM 50 CA CYS C 96 93.161 63.059 68.928 1.00 29.27 ATOM 51 C CYS C 96 92.976 61.562 68.746 1.00 27.29 ATOM 52 O CYS C 96 92.393 61.112 67.756 1.00 30.17 ATOM 53 CB CYS C 96 91.835 63.715 69.294 1.00 39.93 ATOM 54 SG CYS C 96 91.060 63.071 70.780 1.00 39.93 ATOM 55 N TYR C 97 93.490 60.791 69.707 1.00 27.76 ATOM 56 CA TYR C 97 93.341 59.341 69.660 1.00 29.10 ATOM 57 C TYR C 97 91.886 58.938 69.826 1.00 29.37 ATOM 58 O TYR C 97 91.456 57.899 69.314 1.00 29.15 ATOM 59 CB TYR C 97 94.189 58.689 70.751 1.00 37.96 ATOM 60 CG TYR C 97 94.133 57.175 70.762 1.00 37.96 ATOM 61 CD1 TYR C 97 94.906 56.427 69.888 1.00 37.96 ATOM 62 CD2 TYR C 97 93.294 56.497 71.635 1.00 37.96 ATOM 63 CE1 TYR C 97 94.856 55.049 69.896 1.00 37.96 ATOM 64 CE2 TYR C 97 93.231 55.127 71.643 1.00 37.96 ATOM 65 CZ TYR C 97 94.016 54.408 70.776 1.00 37.96 ATOM 66 OH TYR C 97 93.952 53.036 70.792 1.00 37.96 ATOM 67 N PHE C 98 91.110 59.753 70.536 1.00 30.15 ATOM 68 CA PHE C 98 89.748 59.371 70.865 1.00 26.39 ATOM 69 C PHE C 98 88.793 59.629 69.710 1.00 30.83 ATOM 70 O PHE C 98 87.622 59.243 69.781 1.00 25.38 ATOM 71 CB PHE C 98 89.322 60.097 72.136 1.00 40.45 ATOM 72 CG PHE C 98 90.147 59.717 73.327 1.00 40.45 ATOM 73 CD1 PHE C 98 89.894 58.546 74.010 1.00 40.45 ATOM 74 CD2 PHE C 98 91.209 60.502 73.729 1.00 40.45 ATOM 75 CE1 PHE C 98 90.666 58.182 75.093 1.00 40.45 ATOM 76 CE2 PHE C 98 91.988 60.140 74.812 1.00 40.45 ATOM 77 CZ PHE C 98 91.717 58.979 75.491 1.00 40.45 ATOM 78 N TYR C 99 89.270 60.266 68.639 1.00 28.81 ATOM 79 CA TYR C 99 88.483 60.325 67.414 1.00 32.68 ATOM 80 C TYR C 99 88.759 59.143 66.496 1.00 32.66 ATOM 81 O TYR C 99 87.839 58.628 65.853 1.00 33.25 ATOM 82 CB TYR C 99 88.742 61.634 66.674 1.00 39.69 ATOM 83 CG TYR C 99 87.959 62.801 67.206 1.00 39.69 ATOM 84 CD1 TYR C 99 87.002 62.634 68.192 1.00 39.69 ATOM 85 CD2 TYR C 99 88.112 64.059 66.657 1.00 39.69 ATOM 86 CE1 TYR C 99 86.267 63.702 68.648 1.00 39.69 ATOM 87 CE2 TYR C 99 87.370 65.112 67.103 1.00 39.69 ATOM 88 CZ TYR C 99 86.458 64.938 68.102 1.00 39.69 ATOM 89 OH TYR C 99 85.724 66.006 68.550 1.00 39.69 ATOM 90 N SER C 100 90.019 58.701 66.419 1.00 31.42 ATOM 91 CA SER C 100 90.395 57.678 65.447 1.00 37.08 ATOM 92 C SER C 100 89.816 56.316 65.802 1.00 36.00 ATOM 93 O SER C 100 89.381 55.575 64.915 1.00 37.22 ATOM 94 CB SER C 100 91.913 57.572 65.338 1.00 43.59 ATOM 95 OG SER C 100 92.457 56.992 66.507 1.00 43.59 ATOM 96 N LYS C 101 89.784 55.971 67.086 1.00 32.74 ATOM 97 CA LYS C 101 89.215 54.704 67.515 1.00 34.59 ATOM 98 C LYS C 101 87.826 54.888 68.107 1.00 36.89 ATOM 99 O LYS C 101 86.844 54.356 67.582 1.00 37.25 ATOM 100 CB LYS C 101 90.122 54.040 68.562 1.00 48.94 ATOM 101 CG LYS C 101 91.539 53.748 68.120 1.00 48.94 ATOM 102 CD LYS C 101 91.605 52.616 67.126 1.00 48.94 ATOM 103 CE LYS C 101 93.048 52.281 66.794 1.00 48.94 ATOM 104 NZ LYS C 101 93.138 51.198 65.777 1.00 48.94 ATOM 105 N PHE C 102 87.724 55.653 69.182 1.00 37.18 ATOM 106 CA PHE C 102 86.532 55.661 70.026 1.00 34.56 ATOM 107 C PHE C 102 85.584 56.805 69.705 1.00 37.58 ATOM 108 O PHE C 102 85.162 57.508 70.623 1.00 36.54 ATOM 109 CB PHE C 102 86.952 55.710 71.485 1.00 49.38 ATOM 110 CG PHE C 102 87.539 54.431 71.994 1.00 49.38 ATOM 111 CD1 PHE C 102 87.310 53.231 71.342 1.00 49.38 ATOM 112 CD2 PHE C 102 88.330 54.430 73.128 1.00 49.38 ATOM 113 CE1 PHE C 102 87.853 52.052 71.818 1.00 49.38 ATOM 114 CE2 PHE C 102 88.879 53.255 73.607 1.00 49.38 ATOM 115 CZ PHE C 102 88.640 52.067 72.951 1.00 49.38 ATOM 116 N GLY C 103 85.206 56.992 68.442 1.00 31.57 ATOM 117 CA GLY C 103 84.153 57.937 68.115 1.00 36.09 ATOM 118 C GLY C 103 84.452 59.395 68.404 1.00 33.86 ATOM 119 O GLY C 103 85.140 60.076 67.641 1.00 35.52 ATOM 120 N GLU C 104 83.884 59.878 69.508 1.00 34.63 ATOM 121 CA GLU C 104 84.009 61.250 69.973 1.00 33.24 ATOM 122 C GLU C 104 85.056 61.356 71.083 1.00 27.71 ATOM 123 O GLU C 104 85.602 60.360 71.562 1.00 29.11 ATOM 124 CB GLU C 104 82.661 61.742 70.486 1.00 46.43 ATOM 125 CG GLU C 104 82.278 61.138 71.834 1.00 46.43 ATOM 126 CD GLU C 104 81.600 59.781 71.738 1.00 46.43 ATOM 127 OE1 GLU C 104 81.649 59.141 70.668 1.00 46.43 ATOM 128 OE2 GLU C 104 81.017 59.344 72.750 1.00 46.43 ATOM 129 N CYS C 105 85.320 62.585 71.516 1.00 28.14 ATOM 130 CA CYS C 105 86.147 62.869 72.676 1.00 27.61 ATOM 131 C CYS C 105 85.231 63.143 73.858 1.00 27.69 ATOM 132 O CYS C 105 84.020 63.293 73.705 1.00 26.10 ATOM 133 CB CYS C 105 87.069 64.062 72.424 1.00 37.28 ATOM 134 SG CYS C 105 86.189 65.620 72.240 1.00 37.28 ATOM 135 N SER C 106 85.813 63.218 75.050 1.00 26.82 ATOM 136 CA SER C 106 84.986 63.415 76.230 1.00 29.69 ATOM 137 C SER C 106 85.040 64.861 76.699 1.00 28.09 ATOM 138 O SER C 106 83.994 65.486 76.889 1.00 27.03 ATOM 139 CB SER C 106 85.412 62.474 77.351 1.00 36.60 ATOM 140 OG SER C 106 84.534 62.576 78.455 1.00 36.60 ATOM 141 N ASN C 107 86.237 65.410 76.893 1.00 29.55 ATOM 142 CA ASN C 107 86.353 66.807 77.299 1.00 27.50 ATOM 143 C ASN C 107 86.235 67.710 76.074 1.00 29.25 ATOM 144 O ASN C 107 86.694 67.363 74.981 1.00 27.68 ATOM 145 CB ASN C 107 87.647 67.057 78.071 1.00 38.87 ATOM 146 CG ASN C 107 88.886 66.570 77.347 1.00 38.87 ATOM 147 OD1 ASN C 107 88.820 66.026 76.251 1.00 38.87 ATOM 148 ND2 ASN C 107 90.039 66.774 77.972 1.00 38.87 ATOM 149 N LYS C 108 85.580 68.859 76.245 1.00 28.97 ATOM 150 CA LYS C 108 85.418 69.786 75.135 1.00 29.37 ATOM 151 C LYS C 108 86.647 70.654 74.935 1.00 33.63 ATOM 152 O LYS C 108 86.833 71.201 73.843 1.00 30.12 ATOM 153 CB LYS C 108 84.199 70.675 75.360 1.00 42.31 ATOM 154 CG LYS C 108 82.871 69.955 75.292 1.00 42.31 ATOM 155 CD LYS C 108 81.732 70.952 75.397 1.00 42.31 ATOM 156 CE LYS C 108 81.596 71.480 76.817 1.00 42.31 ATOM 157 NZ LYS C 108 80.426 72.388 76.971 1.00 42.31 ATOM 158 N GLU C 109 87.491 70.787 75.956 1.00 29.69 ATOM 159 CA GLU C 109 88.701 71.593 75.872 1.00 33.64 ATOM 160 C GLU C 109 89.912 70.796 75.425 1.00 30.80 ATOM 161 O GLU C 109 91.030 71.137 75.825 1.00 30.95 ATOM 162 CB GLU C 109 88.987 72.243 77.220 1.00 40.65 ATOM 163 CG GLU C 109 87.896 73.170 77.678 1.00 40.65 ATOM 164 CD GLU C 109 88.201 73.785 79.020 1.00 40.65 ATOM 165 OE1 GLU C 109 89.248 73.442 79.604 1.00 40.65 ATOM 166 OE2 GLU C 109 87.383 74.594 79.498 1.00 40.65 ATOM 167 N CYS C 110 89.708 69.740 74.628 1.00 27.97 ATOM 168 CA CYS C 110 90.752 68.866 74.107 1.00 28.56 ATOM 169 C CYS C 110 91.682 69.652 73.197 1.00 30.36 ATOM 170 O CYS C 110 91.237 70.177 72.172 1.00 27.58 ATOM 171 CB CYS C 110 90.135 67.693 73.347 1.00 37.40 ATOM 172 SG CYS C 110 91.332 66.555 72.647 1.00 37.40 ATOM 173 N PRO C 111 92.963 69.781 73.552 1.00 32.82 ATOM 174 CA PRO C 111 93.857 70.613 72.739 1.00 33.40 ATOM 175 C PRO C 111 94.168 70.005 71.393 1.00 35.16 ATOM 176 O PRO C 111 94.170 70.734 70.397 1.00 33.40 ATOM 177 CB PRO C 111 95.118 70.724 73.606 1.00 58.16 ATOM 178 CG PRO C 111 94.669 70.408 74.979 1.00 58.16 ATOM 179 CD PRO C 111 93.607 69.370 74.807 1.00 58.16 ATOM 180 N PHE C 112 94.357 68.687 71.335 1.00 31.49 ATOM 181 CA PHE C 112 94.886 68.005 70.160 1.00 33.05 ATOM 182 C PHE C 112 93.921 68.109 68.984 1.00 35.13 ATOM 183 O PHE C 112 92.716 68.302 69.165 1.00 32.99 ATOM 184 CB PHE C 112 95.152 66.544 70.505 1.00 42.78 ATOM 185 CG PHE C 112 96.189 66.362 71.571 1.00 42.78 ATOM 186 CD1 PHE C 112 97.531 66.340 71.253 1.00 42.78 ATOM 187 CD2 PHE C 112 95.822 66.244 72.897 1.00 42.78 ATOM 188 CE1 PHE C 112 98.485 66.181 72.235 1.00 42.78 ATOM 189 CE2 PHE C 112 96.768 66.089 73.882 1.00 42.78 ATOM 190 CZ PHE C 112 98.100 66.056 73.550 1.00 42.78 ATOM 191 N LEU C 113 94.468 67.995 67.770 1.00 34.58 ATOM 192 CA LEU C 113 93.744 68.380 66.560 1.00 34.56 ATOM 193 C LEU C 113 92.550 67.483 66.281 1.00 34.29 ATOM 194 O LEU C 113 92.657 66.253 66.278 1.00 34.98 ATOM 195 CB LEU C 113 94.671 68.386 65.350 1.00 49.97 ATOM 196 CG LEU C 113 95.579 69.600 65.237 1.00 49.97 ATOM 197 CD1 LEU C 113 96.476 69.467 64.030 1.00 49.97 ATOM 198 CD2 LEU C 113 94.728 70.845 65.126 1.00 49.97 ATOM 199 N HIS C 114 91.416 68.124 66.042 1.00 33.04 ATOM 200 CA HIS C 114 90.159 67.462 65.750 1.00 38.14 ATOM 201 C HIS C 114 89.891 67.567 64.257 1.00 38.87 ATOM 202 O HIS C 114 89.631 68.661 63.748 1.00 40.94 ATOM 203 CB HIS C 114 89.032 68.108 66.552 1.00 44.35 ATOM 204 CG HIS C 114 89.095 67.815 68.019 1.00 44.35 ATOM 205 ND1 HIS C 114 88.244 68.398 68.932 1.00 44.35 ATOM 206 CD2 HIS C 114 89.896 66.987 68.729 1.00 44.35 ATOM 207 CE1 HIS C 114 88.521 67.945 70.141 1.00 44.35 ATOM 208 NE2 HIS C 114 89.521 67.088 70.047 1.00 44.35 ATOM 209 N ILE C 115 89.984 66.441 63.553 1.00 40.28 ATOM 210 CA ILE C 115 89.681 66.396 62.126 1.00 46.70 ATOM 211 C ILE C 115 88.637 65.320 61.877 1.00 48.29 ATOM 212 O ILE C 115 88.188 64.646 62.810 1.00 45.20 ATOM 213 CB ILE C 115 90.935 66.127 61.277 1.00 59.24 ATOM 214 CG1 ILE C 115 91.515 64.760 61.629 1.00 59.24 ATOM 215 CG2 ILE C 115 91.971 67.218 61.463 1.00 59.24 ATOM 216 CD1 ILE C 115 92.574 64.292 60.676 1.00 59.24 ATOM 217 N ASP C 116 88.253 65.146 60.618 1.00 52.03 ATOM 218 CA ASP C 116 87.272 64.133 60.247 1.00 56.54 ATOM 219 C ASP C 116 87.936 62.879 59.711 1.00 59.61 ATOM 220 O ASP C 116 87.610 62.422 58.620 1.00 58.87 ATOM 221 CB ASP C 116 86.306 64.686 59.207 1.00 67.57 ATOM 222 CG ASP C 116 85.395 65.748 59.775 1.00 67.57 ATOM 223 OD1 ASP C 116 85.081 65.672 60.980 1.00 67.57 ATOM 224 OD2 ASP C 116 85.001 66.663 59.022 1.00 67.57 ATOM 225 ZN ZN C 303 89.603 65.289 71.484 1.00 30.00 TER