HEADER DNA BINDING PROTEIN/DNA 31-DEC-69 6E93 TITLE Crystal Structure of ZBTB38 C-terminal Zinc Fingers 6-9 in complex TITLE 2 with methylated DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: Zinc finger and BTB domain-containing protein 38; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 1.75 ANGSTORMS DBREF 6E93 A 1006 1124 UNP Q8NAP3 ZBT38_HUMAN 1006 1124 SEQRES 1 A 28 GLY LEU LYS GLU PHE VAL CYS GLN TYR CYS ASN LYS ALA SEQRES 2 A 28 PHE THR LEU ASN GLU THR LEU LYS ILE HIS GLU ARG ILE SEQRES 3 A 28 HIS THR ATOM 1 N GLY A1062 -15.981 -6.742 0.027 1.00 50.05 ATOM 2 CA GLY A1062 -17.017 -5.952 -0.608 1.00 50.86 ATOM 3 C GLY A1062 -16.530 -4.826 -1.494 1.00 45.74 ATOM 4 O GLY A1062 -17.343 -4.002 -1.927 1.00 47.74 ATOM 5 N LEU A1063 -15.228 -4.750 -1.762 1.00 42.06 ATOM 6 CA LEU A1063 -14.675 -3.795 -2.720 1.00 45.88 ATOM 7 C LEU A1063 -14.679 -4.449 -4.094 1.00 57.82 ATOM 8 O LEU A1063 -13.885 -5.357 -4.360 1.00 72.27 ATOM 9 CB LEU A1063 -13.254 -3.385 -2.344 1.00 44.25 ATOM 10 CG LEU A1063 -12.979 -2.620 -1.055 1.00 49.47 ATOM 11 CD1 LEU A1063 -11.480 -2.494 -0.872 1.00 52.62 ATOM 12 CD2 LEU A1063 -13.632 -1.254 -1.097 1.00 52.21 ATOM 13 N LYS A1064 -15.564 -3.999 -4.970 1.00 51.16 ATOM 14 CA LYS A1064 -15.560 -4.497 -6.342 1.00 42.53 ATOM 15 C LYS A1064 -14.556 -3.652 -7.112 1.00 39.44 ATOM 16 O LYS A1064 -14.882 -2.594 -7.650 1.00 41.13 ATOM 17 CB LYS A1064 -16.961 -4.455 -6.931 1.00 38.59 ATOM 18 CG LYS A1064 -17.883 -5.477 -6.286 1.00 37.70 ATOM 19 CD LYS A1064 -19.189 -5.618 -7.035 1.00 41.93 ATOM 20 CE LYS A1064 -20.070 -6.668 -6.393 1.00 47.10 ATOM 21 NZ LYS A1064 -21.353 -6.829 -7.129 1.00 50.91 ATOM 22 N GLU A1065 -13.305 -4.120 -7.146 1.00 35.03 ATOM 23 CA GLU A1065 -12.180 -3.327 -7.627 1.00 41.34 ATOM 24 C GLU A1065 -11.979 -3.383 -9.133 1.00 36.54 ATOM 25 O GLU A1065 -11.212 -2.580 -9.670 1.00 35.85 ATOM 26 CB GLU A1065 -10.878 -3.780 -6.953 1.00 52.13 ATOM 27 CG GLU A1065 -10.865 -3.654 -5.442 1.00 67.07 ATOM 28 CD GLU A1065 -9.476 -3.861 -4.862 1.00 79.81 ATOM 29 OE1 GLU A1065 -9.038 -3.018 -4.051 1.00 83.73 ATOM 30 OE2 GLU A1065 -8.817 -4.859 -5.230 1.00 83.43 ATOM 31 N PHE A1066 -12.627 -4.299 -9.834 1.00 32.81 ATOM 32 CA PHE A1066 -12.378 -4.479 -11.259 1.00 29.74 ATOM 33 C PHE A1066 -13.541 -3.862 -12.026 1.00 25.12 ATOM 34 O PHE A1066 -14.675 -4.353 -11.953 1.00 27.97 ATOM 35 CB PHE A1066 -12.161 -5.958 -11.560 1.00 27.58 ATOM 36 CG PHE A1066 -11.038 -6.550 -10.755 1.00 31.20 ATOM 37 CD1 PHE A1066 -9.725 -6.398 -11.163 1.00 32.45 ATOM 38 CD2 PHE A1066 -11.296 -7.213 -9.563 1.00 29.32 ATOM 39 CE1 PHE A1066 -8.684 -6.912 -10.403 1.00 34.84 ATOM 40 CE2 PHE A1066 -10.268 -7.742 -8.804 1.00 31.17 ATOM 41 CZ PHE A1066 -8.958 -7.592 -9.225 1.00 32.52 ATOM 42 N VAL A1067 -13.251 -2.780 -12.751 1.00 27.38 ATOM 43 CA VAL A1067 -14.257 -1.895 -13.325 1.00 30.96 ATOM 44 C VAL A1067 -14.175 -1.973 -14.840 1.00 28.56 ATOM 45 O VAL A1067 -13.082 -1.876 -15.414 1.00 30.86 ATOM 46 CB VAL A1067 -14.061 -0.446 -12.853 1.00 34.41 ATOM 47 CG1 VAL A1067 -15.108 0.465 -13.496 1.00 32.02 ATOM 48 CG2 VAL A1067 -14.102 -0.367 -11.328 1.00 37.37 ATOM 49 N CYS A1068 -15.329 -2.128 -15.483 1.00 28.81 ATOM 50 CA CYS A1068 -15.397 -2.231 -16.936 1.00 29.69 ATOM 51 C CYS A1068 -15.086 -0.891 -17.598 1.00 33.29 ATOM 52 O CYS A1068 -15.714 0.126 -17.293 1.00 33.81 ATOM 53 CB CYS A1068 -16.785 -2.713 -17.349 1.00 30.98 ATOM 54 SG CYS A1068 -17.056 -2.802 -19.131 1.00 29.03 ATOM 55 N GLN A1069 -14.117 -0.896 -18.516 1.00 32.47 ATOM 56 CA GLN A1069 -13.716 0.320 -19.214 1.00 37.32 ATOM 57 C GLN A1069 -14.758 0.811 -20.204 1.00 35.08 ATOM 58 O GLN A1069 -14.602 1.919 -20.733 1.00 35.45 ATOM 59 CB GLN A1069 -12.399 0.084 -19.953 1.00 41.40 ATOM 60 CG GLN A1069 -12.493 -1.010 -21.006 1.00 44.11 ATOM 61 CD GLN A1069 -11.161 -1.308 -21.653 1.00 51.78 ATOM 62 OE1 GLN A1069 -10.501 -0.414 -22.175 1.00 54.38 ATOM 63 NE2 GLN A1069 -10.753 -2.573 -21.615 1.00 55.60 ATOM 64 N TYR A1070 -15.790 0.018 -20.497 1.00 35.80 ATOM 65 CA TYR A1070 -16.800 0.394 -21.478 1.00 33.44 ATOM 66 C TYR A1070 -18.083 0.899 -20.835 1.00 36.47 ATOM 67 O TYR A1070 -18.623 1.919 -21.269 1.00 39.77 ATOM 68 CB TYR A1070 -17.117 -0.791 -22.411 1.00 29.79 ATOM 69 CG TYR A1070 -15.899 -1.345 -23.126 1.00 33.69 ATOM 70 CD1 TYR A1070 -15.370 -0.707 -24.244 1.00 43.50 ATOM 71 CD2 TYR A1070 -15.278 -2.499 -22.679 1.00 36.09 ATOM 72 CE1 TYR A1070 -14.249 -1.214 -24.896 1.00 43.60 ATOM 73 CE2 TYR A1070 -14.164 -3.006 -23.318 1.00 40.22 ATOM 74 CZ TYR A1070 -13.653 -2.366 -24.424 1.00 45.03 ATOM 75 OH TYR A1070 -12.541 -2.889 -25.046 1.00 48.75 ATOM 76 N CYS A1071 -18.583 0.230 -19.797 1.00 37.37 ATOM 77 CA CYS A1071 -19.809 0.660 -19.142 1.00 37.71 ATOM 78 C CYS A1071 -19.642 1.014 -17.668 1.00 37.53 ATOM 79 O CYS A1071 -20.598 1.513 -17.065 1.00 39.69 ATOM 80 CB CYS A1071 -20.901 -0.413 -19.278 1.00 35.05 ATOM 81 SG CYS A1071 -20.624 -1.858 -18.233 1.00 32.29 ATOM 82 N ASN A1072 -18.474 0.768 -17.068 1.00 31.40 ATOM 83 CA ASN A1072 -18.114 1.184 -15.709 1.00 35.38 ATOM 84 C ASN A1072 -18.734 0.291 -14.638 1.00 33.82 ATOM 85 O ASN A1072 -18.636 0.630 -13.449 1.00 36.78 ATOM 86 CB ASN A1072 -18.490 2.646 -15.432 1.00 38.61 ATOM 87 CG ASN A1072 -17.612 3.285 -14.365 1.00 51.35 ATOM 88 OD1 ASN A1072 -16.387 3.329 -14.499 1.00 54.90 ATOM 89 ND2 ASN A1072 -18.235 3.798 -13.305 1.00 51.03 ATOM 90 N LYS A1073 -19.358 -0.832 -15.000 1.00 33.37 ATOM 91 CA LYS A1073 -19.811 -1.773 -13.980 1.00 34.17 ATOM 92 C LYS A1073 -18.607 -2.402 -13.295 1.00 34.58 ATOM 93 O LYS A1073 -17.580 -2.652 -13.933 1.00 29.79 ATOM 94 CB LYS A1073 -20.699 -2.864 -14.583 1.00 33.58 ATOM 95 CG LYS A1073 -21.185 -3.864 -13.531 1.00 42.71 ATOM 96 CD LYS A1073 -22.340 -4.728 -14.020 1.00 53.00 ATOM 97 CE LYS A1073 -22.785 -5.721 -12.943 1.00 55.58 ATOM 98 NZ LYS A1073 -23.899 -6.592 -13.424 1.00 54.30 ATOM 99 N ALA A1074 -18.734 -2.659 -11.986 1.00 29.47 ATOM 100 CA ALA A1074 -17.642 -3.165 -11.170 1.00 29.78 ATOM 101 C ALA A1074 -17.886 -4.618 -10.784 1.00 31.74 ATOM 102 O ALA A1074 -19.030 -5.054 -10.632 1.00 31.72 ATOM 103 CB ALA A1074 -17.459 -2.322 -9.907 1.00 34.05 ATOM 104 N PHE A1075 -16.794 -5.366 -10.628 1.00 26.77 ATOM 105 CA PHE A1075 -16.863 -6.791 -10.354 1.00 22.37 ATOM 106 C PHE A1075 -15.868 -7.155 -9.260 1.00 24.84 ATOM 107 O PHE A1075 -14.862 -6.475 -9.059 1.00 28.67 ATOM 108 CB PHE A1075 -16.568 -7.612 -11.615 1.00 25.39 ATOM 109 CG PHE A1075 -17.498 -7.307 -12.745 1.00 27.79 ATOM 110 CD1 PHE A1075 -17.226 -6.273 -13.625 1.00 23.55 ATOM 111 CD2 PHE A1075 -18.664 -8.038 -12.910 1.00 28.34 ATOM 112 CE1 PHE A1075 -18.105 -5.983 -14.673 1.00 26.76 ATOM 113 CE2 PHE A1075 -19.545 -7.757 -13.948 1.00 31.02 ATOM 114 CZ PHE A1075 -19.269 -6.727 -14.830 1.00 27.55 ATOM 115 N THR A1076 -16.153 -8.262 -8.567 1.00 25.05 ATOM 116 CA THR A1076 -15.289 -8.680 -7.470 1.00 28.74 ATOM 117 C THR A1076 -13.959 -9.231 -7.970 1.00 28.92 ATOM 118 O THR A1076 -12.918 -9.005 -7.339 1.00 28.32 ATOM 119 CB THR A1076 -16.003 -9.717 -6.596 1.00 31.50 ATOM 120 OG1 THR A1076 -17.153 -9.117 -5.990 1.00 27.38 ATOM 121 CG2 THR A1076 -15.075 -10.218 -5.474 1.00 35.21 ATOM 122 N LEU A1077 -13.966 -9.957 -9.091 1.00 24.83 ATOM 123 CA LEU A1077 -12.771 -10.629 -9.594 1.00 25.40 ATOM 124 C LEU A1077 -12.388 -10.126 -10.979 1.00 27.51 ATOM 125 O LEU A1077 -13.246 -9.777 -11.794 1.00 22.71 ATOM 126 CB LEU A1077 -12.969 -12.143 -9.688 1.00 24.72 ATOM 127 CG LEU A1077 -13.339 -12.843 -8.388 1.00 23.46 ATOM 128 CD1 LEU A1077 -13.525 -14.313 -8.653 1.00 22.63 ATOM 129 CD2 LEU A1077 -12.222 -12.619 -7.398 1.00 22.45 ATOM 130 N ASN A1078 -11.083 -10.148 -11.245 1.00 25.72 ATOM 131 CA ASN A1078 -10.574 -9.786 -12.565 1.00 27.33 ATOM 132 C ASN A1078 -11.153 -10.703 -13.643 1.00 28.18 ATOM 133 O ASN A1078 -11.602 -10.238 -14.702 1.00 27.66 ATOM 134 CB ASN A1078 -9.042 -9.851 -12.540 1.00 29.18 ATOM 135 CG ASN A1078 -8.396 -9.064 -13.657 1.00 36.83 ATOM 136 OD1 ASN A1078 -9.034 -8.235 -14.304 1.00 33.26 ATOM 137 ND2 ASN A1078 -7.103 -9.309 -13.875 1.00 42.53 ATOM 138 N GLU A1079 -11.163 -12.019 -13.389 1.00 27.42 ATOM 139 CA GLU A1079 -11.696 -12.941 -14.394 1.00 20.86 ATOM 140 C GLU A1079 -13.152 -12.633 -14.713 1.00 22.23 ATOM 141 O GLU A1079 -13.582 -12.757 -15.866 1.00 22.83 ATOM 142 CB GLU A1079 -11.556 -14.384 -13.922 1.00 20.93 ATOM 143 CG GLU A1079 -12.354 -14.689 -12.646 1.00 23.38 ATOM 144 CD GLU A1079 -11.846 -15.928 -11.934 1.00 25.66 ATOM 145 OE1 GLU A1079 -10.940 -15.793 -11.086 1.00 30.06 ATOM 146 OE2 GLU A1079 -12.330 -17.037 -12.261 1.00 28.73 ATOM 147 N THR A1080 -13.930 -12.242 -13.703 1.00 23.38 ATOM 148 CA THR A1080 -15.341 -11.953 -13.929 1.00 20.40 ATOM 149 C THR A1080 -15.503 -10.706 -14.795 1.00 22.74 ATOM 150 O THR A1080 -16.332 -10.672 -15.719 1.00 25.99 ATOM 151 CB THR A1080 -16.051 -11.781 -12.587 1.00 21.58 ATOM 152 OG1 THR A1080 -15.821 -12.946 -11.774 1.00 20.71 ATOM 153 CG2 THR A1080 -17.548 -11.628 -12.801 1.00 22.69 ATOM 154 N LEU A1081 -14.715 -9.670 -14.497 1.00 21.07 ATOM 155 CA LEU A1081 -14.658 -8.498 -15.358 1.00 21.53 ATOM 156 C LEU A1081 -14.332 -8.885 -16.803 1.00 23.59 ATOM 157 O LEU A1081 -14.992 -8.422 -17.739 1.00 24.74 ATOM 158 CB LEU A1081 -13.624 -7.515 -14.812 1.00 22.82 ATOM 159 CG LEU A1081 -13.307 -6.426 -15.836 1.00 26.13 ATOM 160 CD1 LEU A1081 -14.550 -5.634 -16.097 1.00 28.89 ATOM 161 CD2 LEU A1081 -12.179 -5.544 -15.359 1.00 31.51 ATOM 162 N LYS A1082 -13.299 -9.715 -17.004 1.00 23.57 ATOM 163 CA LYS A1082 -12.838 -9.993 -18.363 1.00 29.39 ATOM 164 C LYS A1082 -13.908 -10.722 -19.161 1.00 27.75 ATOM 165 O LYS A1082 -14.124 -10.425 -20.343 1.00 26.22 ATOM 166 CB LYS A1082 -11.541 -10.807 -18.351 1.00 27.93 ATOM 167 CG LYS A1082 -10.283 -10.012 -17.997 1.00 31.23 ATOM 168 CD LYS A1082 -9.087 -10.945 -17.827 1.00 38.59 ATOM 169 CE LYS A1082 -7.878 -10.219 -17.245 1.00 48.94 ATOM 170 NZ LYS A1082 -6.791 -11.165 -16.833 1.00 48.15 ATOM 171 N ILE A1083 -14.592 -11.680 -18.530 1.00 23.21 ATOM 172 CA ILE A1083 -15.687 -12.369 -19.208 1.00 24.33 ATOM 173 C ILE A1083 -16.774 -11.375 -19.590 1.00 22.81 ATOM 174 O ILE A1083 -17.366 -11.445 -20.677 1.00 25.46 ATOM 175 CB ILE A1083 -16.225 -13.500 -18.306 1.00 20.22 ATOM 176 CG1 ILE A1083 -15.205 -14.643 -18.250 1.00 22.23 ATOM 177 CG2 ILE A1083 -17.604 -13.981 -18.781 1.00 25.01 ATOM 178 CD1 ILE A1083 -15.472 -15.660 -17.104 1.00 25.25 ATOM 179 N HIS A1084 -17.045 -10.426 -18.705 1.00 21.88 ATOM 180 CA HIS A1084 -18.055 -9.422 -18.997 1.00 21.11 ATOM 181 C HIS A1084 -17.653 -8.558 -20.182 1.00 25.98 ATOM 182 O HIS A1084 -18.491 -8.233 -21.032 1.00 26.25 ATOM 183 CB HIS A1084 -18.280 -8.555 -17.761 1.00 27.04 ATOM 184 CG HIS A1084 -18.990 -7.275 -18.056 1.00 27.71 ATOM 185 ND1 HIS A1084 -20.364 -7.178 -18.093 1.00 26.75 ATOM 186 CD2 HIS A1084 -18.514 -6.039 -18.345 1.00 26.30 ATOM 187 CE1 HIS A1084 -20.706 -5.936 -18.391 1.00 33.07 ATOM 188 NE2 HIS A1084 -19.602 -5.225 -18.546 1.00 28.22 ATOM 189 N GLU A1085 -16.379 -8.163 -20.257 1.00 21.60 ATOM 190 CA GLU A1085 -15.985 -7.233 -21.314 1.00 24.96 ATOM 191 C GLU A1085 -16.106 -7.844 -22.704 1.00 27.83 ATOM 192 O GLU A1085 -16.247 -7.099 -23.683 1.00 27.08 ATOM 193 CB GLU A1085 -14.559 -6.724 -21.083 1.00 25.91 ATOM 194 CG GLU A1085 -14.479 -5.776 -19.884 1.00 33.63 ATOM 195 CD GLU A1085 -13.231 -4.902 -19.876 1.00 43.64 ATOM 196 OE1 GLU A1085 -12.349 -5.094 -20.739 1.00 41.85 ATOM 197 OE2 GLU A1085 -13.142 -4.012 -19.003 1.00 41.78 ATOM 198 N ARG A1086 -16.074 -9.173 -22.812 1.00 26.47 ATOM 199 CA ARG A1086 -16.329 -9.817 -24.101 1.00 27.15 ATOM 200 C ARG A1086 -17.629 -9.339 -24.737 1.00 29.13 ATOM 201 O ARG A1086 -17.745 -9.299 -25.968 1.00 32.29 ATOM 202 CB ARG A1086 -16.378 -11.328 -23.920 1.00 23.84 ATOM 203 CG ARG A1086 -15.074 -11.918 -23.430 1.00 26.87 ATOM 204 CD ARG A1086 -15.244 -13.402 -23.143 1.00 26.92 ATOM 205 NE ARG A1086 -14.054 -13.973 -22.517 1.00 31.03 ATOM 206 CZ ARG A1086 -14.030 -15.174 -21.958 1.00 29.52 ATOM 207 NH1 ARG A1086 -15.132 -15.923 -21.953 1.00 28.80 ATOM 208 NH2 ARG A1086 -12.917 -15.628 -21.401 1.00 36.44 ATOM 209 N ILE A1087 -18.620 -8.999 -23.920 1.00 28.38 ATOM 210 CA ILE A1087 -19.886 -8.506 -24.447 1.00 29.58 ATOM 211 C ILE A1087 -19.645 -7.270 -25.292 1.00 32.75 ATOM 212 O ILE A1087 -20.228 -7.114 -26.370 1.00 32.98 ATOM 213 CB ILE A1087 -20.867 -8.211 -23.297 1.00 31.53 ATOM 214 CG1 ILE A1087 -21.202 -9.484 -22.516 1.00 32.99 ATOM 215 CG2 ILE A1087 -22.137 -7.547 -23.807 1.00 35.37 ATOM 216 CD1 ILE A1087 -21.905 -9.210 -21.178 1.00 28.34 ATOM 217 N HIS A1088 -18.771 -6.378 -24.817 1.00 33.69 ATOM 218 CA HIS A1088 -18.506 -5.122 -25.512 1.00 33.18 ATOM 219 C HIS A1088 -17.576 -5.312 -26.701 1.00 36.23 ATOM 220 O HIS A1088 -17.790 -4.706 -27.756 1.00 42.95 ATOM 221 CB HIS A1088 -17.886 -4.103 -24.554 1.00 34.18 ATOM 222 CG HIS A1088 -18.739 -3.775 -23.369 1.00 35.03 ATOM 223 ND1 HIS A1088 -19.939 -3.105 -23.475 1.00 31.72 ATOM 224 CD2 HIS A1088 -18.549 -4.000 -22.048 1.00 30.46 ATOM 225 CE1 HIS A1088 -20.455 -2.938 -22.268 1.00 36.75 ATOM 226 NE2 HIS A1088 -19.630 -3.471 -21.385 1.00 33.39 ATOM 227 N THR A1089 -16.518 -6.112 -26.542 1.00 36.56 ATOM 228 CA THR A1089 -15.535 -6.247 -27.606 1.00 39.06 ATOM 229 C THR A1089 -16.030 -7.117 -28.751 1.00 43.14 ATOM 230 O THR A1089 -15.442 -7.082 -29.836 1.00 50.04 ATOM 231 CB THR A1089 -14.225 -6.829 -27.069 1.00 37.43 ATOM 232 OG1 THR A1089 -14.438 -8.178 -26.637 1.00 33.28 ATOM 233 CG2 THR A1089 -13.700 -6.003 -25.900 1.00 38.08 ATOM 234 ZN ZN A1201 -19.279 -3.241 -19.304 1.00 32.47 TER