HEADER DNA BINDING PROTEIN/DNA 31-DEC-69 6E93 TITLE Crystal Structure of ZBTB38 C-terminal Zinc Fingers 6-9 in complex TITLE 2 with methylated DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: Zinc finger and BTB domain-containing protein 38; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 1.75 ANGSTORMS DBREF 6E93 A 1006 1124 UNP Q8NAP3 ZBT38_HUMAN 1006 1124 SEQRES 1 A 28 GLY GLU LYS PRO TYR GLN CYS LYS THR CYS GLY ARG CYS SEQRES 2 A 28 PHE SER VAL GLN GLY ASN LEU GLN LYS HIS GLU ARG ILE SEQRES 3 A 28 HIS LEU ATOM 1 N GLY A1034 -8.270 -34.508 -0.219 1.00 29.32 ATOM 2 CA GLY A1034 -9.189 -33.502 0.262 1.00 29.39 ATOM 3 C GLY A1034 -8.596 -32.524 1.256 1.00 34.32 ATOM 4 O GLY A1034 -9.346 -31.769 1.878 1.00 35.85 ATOM 5 N GLU A1035 -7.276 -32.507 1.424 1.00 28.77 ATOM 6 CA GLU A1035 -6.655 -31.537 2.313 1.00 29.39 ATOM 7 C GLU A1035 -6.842 -30.123 1.781 1.00 32.32 ATOM 8 O GLU A1035 -6.650 -29.860 0.586 1.00 28.52 ATOM 9 CB GLU A1035 -5.168 -31.825 2.466 1.00 33.85 ATOM 10 CG GLU A1035 -4.464 -30.782 3.321 1.00 37.30 ATOM 11 CD GLU A1035 -2.963 -30.840 3.204 1.00 40.69 ATOM 12 OE1 GLU A1035 -2.283 -30.496 4.192 1.00 42.55 ATOM 13 OE2 GLU A1035 -2.459 -31.222 2.128 1.00 40.40 ATOM 14 N LYS A1036 -7.205 -29.203 2.680 1.00 28.59 ATOM 15 CA LYS A1036 -7.444 -27.804 2.311 1.00 26.46 ATOM 16 C LYS A1036 -6.779 -26.906 3.344 1.00 29.11 ATOM 17 O LYS A1036 -7.416 -26.455 4.309 1.00 26.11 ATOM 18 CB LYS A1036 -8.942 -27.507 2.206 1.00 27.83 ATOM 19 CG LYS A1036 -9.674 -28.353 1.145 1.00 28.66 ATOM 20 CD LYS A1036 -11.185 -28.263 1.310 1.00 31.28 ATOM 21 CE LYS A1036 -11.910 -29.094 0.251 1.00 34.95 ATOM 22 NZ LYS A1036 -13.391 -29.065 0.470 1.00 32.83 ATOM 23 N PRO A1037 -5.496 -26.600 3.163 1.00 28.54 ATOM 24 CA PRO A1037 -4.730 -25.983 4.254 1.00 31.00 ATOM 25 C PRO A1037 -5.080 -24.531 4.512 1.00 28.18 ATOM 26 O PRO A1037 -4.767 -24.028 5.595 1.00 30.27 ATOM 27 CB PRO A1037 -3.271 -26.112 3.784 1.00 33.14 ATOM 28 CG PRO A1037 -3.304 -26.976 2.535 1.00 30.10 ATOM 29 CD PRO A1037 -4.668 -26.827 1.963 1.00 30.29 ATOM 30 N TYR A1038 -5.712 -23.835 3.566 1.00 25.17 ATOM 31 CA TYR A1038 -5.783 -22.380 3.591 1.00 24.37 ATOM 32 C TYR A1038 -7.194 -21.954 3.976 1.00 24.33 ATOM 33 O TYR A1038 -8.131 -22.090 3.179 1.00 25.04 ATOM 34 CB TYR A1038 -5.358 -21.814 2.235 1.00 26.17 ATOM 35 CG TYR A1038 -3.996 -22.330 1.807 1.00 26.37 ATOM 36 CD1 TYR A1038 -2.830 -21.860 2.405 1.00 27.44 ATOM 37 CD2 TYR A1038 -3.880 -23.292 0.809 1.00 25.18 ATOM 38 CE1 TYR A1038 -1.582 -22.340 2.013 1.00 38.17 ATOM 39 CE2 TYR A1038 -2.641 -23.777 0.411 1.00 25.75 ATOM 40 CZ TYR A1038 -1.499 -23.298 1.013 1.00 35.27 ATOM 41 OH TYR A1038 -0.272 -23.783 0.616 1.00 38.84 ATOM 42 N GLN A1039 -7.340 -21.407 5.179 1.00 21.26 ATOM 43 CA GLN A1039 -8.654 -21.154 5.763 1.00 23.24 ATOM 44 C GLN A1039 -9.004 -19.669 5.769 1.00 22.77 ATOM 45 O GLN A1039 -8.200 -18.825 6.183 1.00 22.47 ATOM 46 CB GLN A1039 -8.724 -21.710 7.182 1.00 22.45 ATOM 47 CG GLN A1039 -10.058 -21.432 7.871 1.00 22.91 ATOM 48 CD GLN A1039 -10.163 -22.119 9.209 1.00 30.13 ATOM 49 OE1 GLN A1039 -9.295 -21.956 10.064 1.00 33.70 ATOM 50 NE2 GLN A1039 -11.232 -22.896 9.402 1.00 31.03 ATOM 51 N CYS A1040 -10.217 -19.353 5.317 1.00 19.29 ATOM 52 CA CYS A1040 -10.683 -17.978 5.339 1.00 22.03 ATOM 53 C CYS A1040 -10.896 -17.553 6.782 1.00 25.11 ATOM 54 O CYS A1040 -11.597 -18.232 7.540 1.00 23.28 ATOM 55 CB CYS A1040 -11.984 -17.838 4.551 1.00 22.74 ATOM 56 SG CYS A1040 -12.744 -16.206 4.727 1.00 22.59 ATOM 57 N LYS A1041 -10.287 -16.431 7.169 1.00 23.18 ATOM 58 CA LYS A1041 -10.379 -16.009 8.558 1.00 25.84 ATOM 59 C LYS A1041 -11.743 -15.441 8.906 1.00 26.03 ATOM 60 O LYS A1041 -12.018 -15.241 10.094 1.00 27.74 ATOM 61 CB LYS A1041 -9.295 -14.978 8.869 1.00 31.93 ATOM 62 CG LYS A1041 -7.873 -15.517 8.755 1.00 41.01 ATOM 63 CD LYS A1041 -6.860 -14.371 8.827 1.00 50.63 ATOM 64 CE LYS A1041 -5.458 -14.826 8.447 1.00 49.01 ATOM 65 NZ LYS A1041 -4.912 -15.794 9.434 1.00 54.13 ATOM 66 N THR A1042 -12.594 -15.163 7.915 1.00 23.06 ATOM 67 CA THR A1042 -13.913 -14.626 8.234 1.00 24.67 ATOM 68 C THR A1042 -14.934 -15.748 8.419 1.00 24.54 ATOM 69 O THR A1042 -15.601 -15.830 9.456 1.00 23.43 ATOM 70 CB THR A1042 -14.375 -13.653 7.141 1.00 27.02 ATOM 71 OG1 THR A1042 -13.492 -12.522 7.103 1.00 26.14 ATOM 72 CG2 THR A1042 -15.792 -13.168 7.418 1.00 30.67 ATOM 73 N CYS A1043 -15.072 -16.619 7.414 1.00 25.66 ATOM 74 CA CYS A1043 -16.146 -17.600 7.441 1.00 23.80 ATOM 75 C CYS A1043 -15.669 -19.009 7.713 1.00 23.47 ATOM 76 O CYS A1043 -16.500 -19.885 7.983 1.00 23.58 ATOM 77 CB CYS A1043 -16.937 -17.559 6.130 1.00 20.95 ATOM 78 SG CYS A1043 -16.081 -18.323 4.727 1.00 21.66 ATOM 79 N GLY A1044 -14.363 -19.246 7.717 1.00 22.21 ATOM 80 CA GLY A1044 -13.857 -20.556 8.053 1.00 19.98 ATOM 81 C GLY A1044 -13.774 -21.531 6.895 1.00 19.90 ATOM 82 O GLY A1044 -13.243 -22.633 7.088 1.00 23.64 ATOM 83 N ARG A1045 -14.245 -21.159 5.697 1.00 23.58 ATOM 84 CA ARG A1045 -14.116 -22.057 4.554 1.00 18.56 ATOM 85 C ARG A1045 -12.642 -22.291 4.241 1.00 23.07 ATOM 86 O ARG A1045 -11.827 -21.368 4.284 1.00 24.92 ATOM 87 CB ARG A1045 -14.825 -21.499 3.320 1.00 23.03 ATOM 88 CG ARG A1045 -14.791 -22.451 2.142 1.00 24.81 ATOM 89 CD ARG A1045 -15.690 -21.966 1.013 1.00 24.53 ATOM 90 NE ARG A1045 -15.625 -22.939 -0.074 1.00 30.67 ATOM 91 CZ ARG A1045 -16.657 -23.290 -0.827 1.00 31.60 ATOM 92 NH1 ARG A1045 -17.846 -22.733 -0.628 1.00 27.80 ATOM 93 NH2 ARG A1045 -16.490 -24.200 -1.780 1.00 27.02 ATOM 94 N CYS A1046 -12.305 -23.529 3.918 1.00 22.18 ATOM 95 CA CYS A1046 -10.925 -23.909 3.643 1.00 20.11 ATOM 96 C CYS A1046 -10.728 -24.192 2.163 1.00 24.27 ATOM 97 O CYS A1046 -11.657 -24.603 1.468 1.00 22.67 ATOM 98 CB CYS A1046 -10.533 -25.136 4.455 1.00 23.55 ATOM 99 SG CYS A1046 -10.472 -24.773 6.235 1.00 30.19 ATOM 100 N PHE A1047 -9.494 -23.990 1.690 1.00 21.25 ATOM 101 CA PHE A1047 -9.168 -24.116 0.273 1.00 25.36 ATOM 102 C PHE A1047 -7.898 -24.937 0.092 1.00 21.66 ATOM 103 O PHE A1047 -6.969 -24.860 0.898 1.00 22.57 ATOM 104 CB PHE A1047 -8.965 -22.732 -0.385 1.00 23.63 ATOM 105 CG PHE A1047 -10.221 -21.930 -0.486 1.00 22.64 ATOM 106 CD1 PHE A1047 -10.723 -21.263 0.627 1.00 23.00 ATOM 107 CD2 PHE A1047 -10.923 -21.865 -1.681 1.00 21.63 ATOM 108 CE1 PHE A1047 -11.904 -20.540 0.536 1.00 20.44 ATOM 109 CE2 PHE A1047 -12.091 -21.128 -1.777 1.00 20.40 ATOM 110 CZ PHE A1047 -12.589 -20.479 -0.673 1.00 20.45 ATOM 111 N SER A1048 -7.847 -25.690 -1.006 1.00 21.56 ATOM 112 CA SER A1048 -6.642 -26.424 -1.361 1.00 20.99 ATOM 113 C SER A1048 -5.544 -25.527 -1.929 1.00 25.66 ATOM 114 O SER A1048 -4.367 -25.901 -1.887 1.00 28.81 ATOM 115 CB SER A1048 -7.000 -27.503 -2.385 1.00 22.77 ATOM 116 OG SER A1048 -7.464 -26.884 -3.572 1.00 27.59 ATOM 117 N VAL A1049 -5.898 -24.354 -2.445 1.00 25.44 ATOM 118 CA VAL A1049 -4.987 -23.499 -3.202 1.00 26.07 ATOM 119 C VAL A1049 -5.030 -22.106 -2.606 1.00 23.95 ATOM 120 O VAL A1049 -6.099 -21.489 -2.554 1.00 23.92 ATOM 121 CB VAL A1049 -5.366 -23.434 -4.690 1.00 28.47 ATOM 122 CG1 VAL A1049 -4.471 -22.417 -5.421 1.00 33.07 ATOM 123 CG2 VAL A1049 -5.279 -24.812 -5.331 1.00 27.91 ATOM 124 N GLN A1050 -3.868 -21.585 -2.209 1.00 26.35 ATOM 125 CA GLN A1050 -3.828 -20.266 -1.577 1.00 28.06 ATOM 126 C GLN A1050 -4.426 -19.186 -2.479 1.00 25.56 ATOM 127 O GLN A1050 -5.153 -18.307 -2.011 1.00 23.32 ATOM 128 CB GLN A1050 -2.389 -19.919 -1.205 1.00 26.09 ATOM 129 CG GLN A1050 -2.182 -18.460 -0.921 1.00 41.16 ATOM 130 CD GLN A1050 -2.327 -18.148 0.538 1.00 50.29 ATOM 131 OE1 GLN A1050 -1.536 -18.605 1.364 1.00 56.06 ATOM 132 NE2 GLN A1050 -3.337 -17.357 0.871 1.00 53.92 ATOM 133 N GLY A1051 -4.136 -19.234 -3.776 1.00 23.81 ATOM 134 CA GLY A1051 -4.674 -18.222 -4.669 1.00 22.69 ATOM 135 C GLY A1051 -6.190 -18.263 -4.755 1.00 23.44 ATOM 136 O GLY A1051 -6.830 -17.241 -5.019 1.00 23.20 ATOM 137 N ASN A1052 -6.784 -19.438 -4.544 1.00 21.72 ATOM 138 CA ASN A1052 -8.243 -19.530 -4.567 1.00 17.73 ATOM 139 C ASN A1052 -8.850 -18.926 -3.305 1.00 20.43 ATOM 140 O ASN A1052 -9.935 -18.324 -3.359 1.00 21.66 ATOM 141 CB ASN A1052 -8.686 -20.985 -4.743 1.00 18.05 ATOM 142 CG ASN A1052 -8.403 -21.519 -6.146 1.00 21.83 ATOM 143 OD1 ASN A1052 -8.182 -20.751 -7.079 1.00 23.40 ATOM 144 ND2 ASN A1052 -8.393 -22.839 -6.288 1.00 23.88 ATOM 145 N LEU A1053 -8.185 -19.103 -2.150 1.00 19.63 ATOM 146 CA LEU A1053 -8.640 -18.426 -0.936 1.00 16.76 ATOM 147 C LEU A1053 -8.615 -16.921 -1.130 1.00 20.22 ATOM 148 O LEU A1053 -9.573 -16.223 -0.778 1.00 22.72 ATOM 149 CB LEU A1053 -7.779 -18.837 0.260 1.00 18.29 ATOM 150 CG LEU A1053 -8.012 -18.030 1.540 1.00 21.93 ATOM 151 CD1 LEU A1053 -9.483 -18.104 1.987 1.00 21.21 ATOM 152 CD2 LEU A1053 -7.071 -18.515 2.633 1.00 25.96 ATOM 153 N GLN A1054 -7.546 -16.408 -1.741 1.00 22.15 ATOM 154 CA GLN A1054 -7.415 -14.967 -1.909 1.00 28.61 ATOM 155 C GLN A1054 -8.540 -14.395 -2.760 1.00 21.76 ATOM 156 O GLN A1054 -9.039 -13.301 -2.469 1.00 23.10 ATOM 157 CB GLN A1054 -6.041 -14.636 -2.492 1.00 34.40 ATOM 158 CG GLN A1054 -4.948 -14.796 -1.430 1.00 51.08 ATOM 159 CD GLN A1054 -3.547 -14.889 -2.002 1.00 73.45 ATOM 160 OE1 GLN A1054 -3.360 -14.991 -3.214 1.00 86.71 ATOM 161 NE2 GLN A1054 -2.551 -14.864 -1.124 1.00 73.61 ATOM 162 N LYS A1055 -8.950 -15.106 -3.826 1.00 21.96 ATOM 163 CA LYS A1055 -10.132 -14.684 -4.578 1.00 20.31 ATOM 164 C LYS A1055 -11.361 -14.664 -3.681 1.00 20.58 ATOM 165 O LYS A1055 -12.176 -13.734 -3.720 1.00 23.54 ATOM 166 CB LYS A1055 -10.396 -15.631 -5.754 1.00 23.80 ATOM 167 CG LYS A1055 -9.413 -15.577 -6.898 1.00 30.20 ATOM 168 CD LYS A1055 -9.911 -16.579 -7.953 1.00 26.83 ATOM 169 CE LYS A1055 -8.924 -16.887 -9.039 1.00 32.35 ATOM 170 NZ LYS A1055 -9.580 -17.860 -9.938 1.00 24.95 ATOM 171 N HIS A1056 -11.532 -15.724 -2.899 1.00 21.11 ATOM 172 CA HIS A1056 -12.684 -15.817 -2.016 1.00 22.38 ATOM 173 C HIS A1056 -12.707 -14.667 -1.027 1.00 23.54 ATOM 174 O HIS A1056 -13.766 -14.103 -0.728 1.00 24.20 ATOM 175 CB HIS A1056 -12.648 -17.167 -1.301 1.00 21.72 ATOM 176 CG HIS A1056 -13.596 -17.256 -0.159 1.00 22.72 ATOM 177 ND1 HIS A1056 -14.923 -17.597 -0.319 1.00 21.18 ATOM 178 CD2 HIS A1056 -13.427 -16.983 1.160 1.00 24.90 ATOM 179 CE1 HIS A1056 -15.525 -17.551 0.859 1.00 23.89 ATOM 180 NE2 HIS A1056 -14.635 -17.194 1.772 1.00 20.79 ATOM 181 N GLU A1057 -11.546 -14.307 -0.491 1.00 22.69 ATOM 182 CA GLU A1057 -11.532 -13.277 0.534 1.00 23.08 ATOM 183 C GLU A1057 -12.028 -11.944 -0.001 1.00 24.12 ATOM 184 O GLU A1057 -12.581 -11.138 0.760 1.00 25.19 ATOM 185 CB GLU A1057 -10.127 -13.148 1.116 1.00 23.51 ATOM 186 CG GLU A1057 -9.758 -14.356 1.942 1.00 27.25 ATOM 187 CD GLU A1057 -8.290 -14.366 2.366 1.00 39.23 ATOM 188 OE1 GLU A1057 -7.426 -13.815 1.638 1.00 43.74 ATOM 189 OE2 GLU A1057 -8.009 -14.937 3.434 1.00 36.27 ATOM 190 N ARG A1058 -11.879 -11.700 -1.307 1.00 28.48 ATOM 191 CA ARG A1058 -12.379 -10.450 -1.862 1.00 31.43 ATOM 192 C ARG A1058 -13.879 -10.311 -1.658 1.00 32.96 ATOM 193 O ARG A1058 -14.396 -9.190 -1.598 1.00 32.33 ATOM 194 CB ARG A1058 -12.043 -10.364 -3.350 1.00 34.12 ATOM 195 CG ARG A1058 -10.574 -10.185 -3.629 1.00 31.02 ATOM 196 CD ARG A1058 -10.336 -10.095 -5.130 1.00 30.88 ATOM 197 NE ARG A1058 -8.919 -9.943 -5.438 1.00 32.71 ATOM 198 CZ ARG A1058 -8.316 -8.769 -5.571 1.00 42.77 ATOM 199 NH1 ARG A1058 -9.004 -7.644 -5.421 1.00 42.95 ATOM 200 NH2 ARG A1058 -7.027 -8.718 -5.854 1.00 46.31 ATOM 201 N ILE A1059 -14.596 -11.430 -1.559 1.00 22.74 ATOM 202 CA ILE A1059 -16.041 -11.356 -1.370 1.00 26.96 ATOM 203 C ILE A1059 -16.370 -10.674 -0.054 1.00 29.57 ATOM 204 O ILE A1059 -17.282 -9.842 0.020 1.00 35.84 ATOM 205 CB ILE A1059 -16.674 -12.754 -1.437 1.00 29.59 ATOM 206 CG1 ILE A1059 -16.365 -13.409 -2.785 1.00 25.02 ATOM 207 CG2 ILE A1059 -18.182 -12.641 -1.197 1.00 29.81 ATOM 208 CD1 ILE A1059 -16.782 -14.869 -2.870 1.00 27.64 ATOM 209 N HIS A1060 -15.645 -11.024 1.006 1.00 28.41 ATOM 210 CA HIS A1060 -15.906 -10.435 2.314 1.00 28.83 ATOM 211 C HIS A1060 -15.534 -8.956 2.355 1.00 38.94 ATOM 212 O HIS A1060 -16.171 -8.184 3.076 1.00 41.45 ATOM 213 CB HIS A1060 -15.154 -11.206 3.404 1.00 31.66 ATOM 214 CG HIS A1060 -15.551 -12.645 3.513 1.00 30.95 ATOM 215 ND1 HIS A1060 -16.865 -13.050 3.638 1.00 32.59 ATOM 216 CD2 HIS A1060 -14.807 -13.778 3.522 1.00 25.89 ATOM 217 CE1 HIS A1060 -16.911 -14.370 3.708 1.00 30.94 ATOM 218 NE2 HIS A1060 -15.676 -14.835 3.656 1.00 25.20 ATOM 219 N LEU A1061 -14.517 -8.538 1.593 1.00 38.90 ATOM 220 CA LEU A1061 -14.140 -7.125 1.598 1.00 45.35 ATOM 221 C LEU A1061 -15.226 -6.239 1.004 1.00 47.35 ATOM 222 O LEU A1061 -15.371 -5.085 1.418 1.00 49.19 ATOM 223 CB LEU A1061 -12.832 -6.915 0.838 1.00 44.88 ATOM 224 CG LEU A1061 -11.570 -7.450 1.507 1.00 55.85 ATOM 225 CD1 LEU A1061 -10.397 -7.416 0.536 1.00 55.04 ATOM 226 CD2 LEU A1061 -11.264 -6.642 2.761 1.00 57.63 ATOM 227 ZN ZN A1202 -14.811 -16.633 3.772 1.00 24.60 TER