HEADER RIBOSOME 31-DEC-69 6EM3 TITLE State A architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the TITLE 2 assembly pathway of nucleolar pre-60S ribosomes COMPND MOL_ID: 27; COMPND 2 MOLECULE: ATP-dependent RNA helicase HAS1; COMPND 3 CHAIN: D; COMPND 4 EC: 3.6.4.13; COMPND 5 Backbone model; EXPDTA ELECTRON MICROSCOPY DBREF 6EM3 D 1 505 UNP Q03532 HAS1_YEAST 1 505 SEQRES 1 D 63 GLU ASN LYS ILE ALA ASN VAL GLN SER GLN LEU GLU LYS SEQRES 2 D 63 LEU ILE LYS SER ASN TYR TYR LEU HIS GLN THR ALA LYS SEQRES 3 D 63 ASP GLY TYR ARG SER TYR LEU GLN ALA TYR ALA SER HIS SEQRES 4 D 63 SER LEU LYS THR VAL TYR GLN ILE ASP LYS LEU ASP LEU SEQRES 5 D 63 ALA LYS VAL ALA LYS SER TYR GLY PHE PRO VAL ATOM 1 N GLU D 419 156.119 238.290 121.054 1.00218.10 ATOM 2 CA GLU D 419 157.098 238.339 122.139 1.00238.74 ATOM 3 C GLU D 419 158.464 238.861 121.712 1.00187.48 ATOM 4 O GLU D 419 159.260 239.313 122.510 1.00160.71 ATOM 5 N ASN D 420 158.734 238.797 120.421 1.00179.52 ATOM 6 CA ASN D 420 160.051 239.174 119.894 1.00154.38 ATOM 7 C ASN D 420 160.067 240.611 119.424 1.00152.99 ATOM 8 O ASN D 420 160.912 240.984 118.612 1.00142.18 ATOM 9 N LYS D 421 159.133 241.424 119.913 1.00151.15 ATOM 10 CA LYS D 421 159.032 242.811 119.490 1.00142.32 ATOM 11 C LYS D 421 159.541 243.803 120.511 1.00111.59 ATOM 12 O LYS D 421 159.700 244.990 120.174 1.00 87.74 ATOM 13 N ILE D 422 159.807 243.340 121.724 1.00 98.43 ATOM 14 CA ILE D 422 160.252 244.221 122.801 1.00 95.12 ATOM 15 C ILE D 422 161.616 244.799 122.485 1.00 96.49 ATOM 16 O ILE D 422 162.453 244.163 121.841 1.00114.38 ATOM 17 N ALA D 423 161.828 246.017 122.921 1.00104.30 ATOM 18 CA ALA D 423 163.018 246.749 122.540 1.00124.17 ATOM 19 C ALA D 423 164.210 246.199 123.244 1.00105.30 ATOM 20 O ALA D 423 164.134 245.860 124.422 1.00107.98 ATOM 21 N ASN D 424 165.334 246.134 122.527 1.00129.33 ATOM 22 CA ASN D 424 166.550 245.583 123.086 1.00159.19 ATOM 23 C ASN D 424 167.416 246.716 123.641 1.00124.04 ATOM 24 O ASN D 424 168.451 247.096 123.102 1.00144.06 ATOM 25 N VAL D 425 166.961 247.255 124.750 1.00 78.78 ATOM 26 CA VAL D 425 167.596 248.344 125.377 1.00 81.25 ATOM 27 C VAL D 425 168.217 247.819 126.650 1.00 96.47 ATOM 28 O VAL D 425 168.950 248.560 127.342 1.00132.21 ATOM 29 N GLN D 426 168.002 246.544 126.969 1.00 99.62 ATOM 30 CA GLN D 426 168.568 246.028 128.220 1.00108.90 ATOM 31 C GLN D 426 170.105 245.927 128.215 1.00108.33 ATOM 32 O GLN D 426 170.769 246.093 129.212 1.00115.74 ATOM 33 N SER D 427 170.644 245.715 127.043 1.00143.55 ATOM 34 CA SER D 427 172.072 245.928 126.801 1.00158.93 ATOM 35 C SER D 427 172.490 247.383 127.043 1.00130.73 ATOM 36 O SER D 427 173.544 247.630 127.577 1.00136.89 ATOM 37 N GLN D 428 171.665 248.342 126.635 1.00136.06 ATOM 38 CA GLN D 428 171.983 249.756 126.852 1.00145.99 ATOM 39 C GLN D 428 171.820 250.138 128.305 1.00107.23 ATOM 40 O GLN D 428 172.534 250.990 128.803 1.00 97.95 ATOM 41 N LEU D 429 170.916 249.470 128.993 1.00 95.52 ATOM 42 CA LEU D 429 170.556 249.902 130.323 1.00118.72 ATOM 43 C LEU D 429 171.529 249.398 131.366 1.00112.45 ATOM 44 O LEU D 429 171.819 250.104 132.343 1.00117.04 ATOM 45 N GLU D 430 172.042 248.191 131.162 1.00110.81 ATOM 46 CA GLU D 430 172.928 247.572 132.130 1.00105.12 ATOM 47 C GLU D 430 174.272 248.270 132.186 1.00 94.94 ATOM 48 O GLU D 430 174.878 248.363 133.249 1.00 81.40 ATOM 49 N LYS D 431 174.740 248.750 131.038 1.00121.31 ATOM 50 CA LYS D 431 175.867 249.672 131.017 1.00159.28 ATOM 51 C LYS D 431 175.481 250.969 131.718 1.00152.91 ATOM 52 O LYS D 431 176.278 251.574 132.441 1.00157.50 ATOM 53 N LEU D 432 174.254 251.407 131.485 1.00126.31 ATOM 54 CA LEU D 432 173.813 252.679 131.996 1.00117.10 ATOM 55 C LEU D 432 173.519 252.643 133.465 1.00 97.96 ATOM 56 O LEU D 432 173.678 253.641 134.154 1.00134.27 ATOM 57 N ILE D 433 173.176 251.488 134.000 1.00 97.15 ATOM 58 CA ILE D 433 172.898 251.413 135.438 1.00101.02 ATOM 59 C ILE D 433 174.201 251.318 136.239 1.00 99.65 ATOM 60 O ILE D 433 174.195 251.373 137.471 1.00 90.43 ATOM 61 N LYS D 434 175.340 251.232 135.539 1.00107.57 ATOM 62 CA LYS D 434 176.612 251.065 136.184 1.00119.90 ATOM 63 C LYS D 434 177.517 252.258 136.032 1.00 99.16 ATOM 64 O LYS D 434 178.684 252.184 136.444 1.00114.19 ATOM 65 N SER D 435 177.038 253.340 135.454 1.00 92.03 ATOM 66 CA SER D 435 178.007 254.297 134.966 1.00130.88 ATOM 67 C SER D 435 177.902 255.633 135.643 1.00193.23 ATOM 68 O SER D 435 178.828 256.437 135.547 1.00241.69 ATOM 69 N ASN D 436 176.804 255.863 136.364 1.00196.24 ATOM 70 CA ASN D 436 176.488 257.213 136.759 1.00182.58 ATOM 71 C ASN D 436 176.400 257.419 138.251 1.00171.20 ATOM 72 O ASN D 436 176.776 258.524 138.745 1.00132.31 ATOM 73 N TYR D 437 175.960 256.330 138.927 1.00133.54 ATOM 74 CA TYR D 437 175.759 256.220 140.375 1.00106.31 ATOM 75 C TYR D 437 174.554 256.976 140.831 1.00 87.86 ATOM 76 O TYR D 437 173.916 256.539 141.805 1.00 93.45 ATOM 77 N TYR D 438 174.153 258.045 140.140 1.00 81.17 ATOM 78 CA TYR D 438 172.886 258.651 140.467 1.00 90.73 ATOM 79 C TYR D 438 171.776 257.775 139.894 1.00 67.25 ATOM 80 O TYR D 438 170.722 257.569 140.527 1.00 69.94 ATOM 81 N LEU D 439 171.997 257.294 138.696 1.00 51.78 ATOM 82 CA LEU D 439 171.084 256.395 138.133 1.00 55.71 ATOM 83 C LEU D 439 171.201 255.086 138.828 1.00 48.51 ATOM 84 O LEU D 439 170.246 254.274 138.760 1.00 79.06 ATOM 85 N HIS D 440 172.314 254.767 139.448 1.00 45.62 ATOM 86 CA HIS D 440 172.360 253.530 140.208 1.00 60.03 ATOM 87 C HIS D 440 171.633 253.672 141.523 1.00 59.19 ATOM 88 O HIS D 440 170.973 252.739 141.969 1.00 55.22 ATOM 89 N GLN D 441 171.767 254.819 142.164 1.00 67.06 ATOM 90 CA GLN D 441 171.054 255.033 143.411 1.00 86.01 ATOM 91 C GLN D 441 169.556 255.018 143.164 1.00 89.20 ATOM 92 O GLN D 441 168.808 254.380 143.916 1.00 78.27 ATOM 93 N THR D 442 169.080 255.744 142.159 1.00 97.28 ATOM 94 CA THR D 442 167.654 255.797 141.895 1.00101.37 ATOM 95 C THR D 442 167.106 254.497 141.339 1.00 71.01 ATOM 96 O THR D 442 165.907 254.277 141.365 1.00 99.34 ATOM 97 N ALA D 443 167.958 253.657 140.810 1.00 52.30 ATOM 98 CA ALA D 443 167.508 252.335 140.515 1.00 59.41 ATOM 99 C ALA D 443 167.310 251.595 141.805 1.00 81.06 ATOM 100 O ALA D 443 166.439 250.690 141.909 1.00109.24 ATOM 101 N LYS D 444 168.134 251.886 142.807 1.00100.74 ATOM 102 CA LYS D 444 168.112 251.109 144.043 1.00131.52 ATOM 103 C LYS D 444 166.879 251.457 144.841 1.00106.84 ATOM 104 O LYS D 444 166.158 250.577 145.327 1.00 84.03 ATOM 105 N ASP D 445 166.624 252.751 145.023 1.00 99.94 ATOM 106 CA ASP D 445 165.433 253.176 145.754 1.00 91.21 ATOM 107 C ASP D 445 164.207 252.779 145.015 1.00 65.91 ATOM 108 O ASP D 445 163.181 252.528 145.614 1.00 64.36 ATOM 109 N GLY D 446 164.267 252.769 143.687 1.00 76.13 ATOM 110 CA GLY D 446 163.152 252.283 142.859 1.00 70.28 ATOM 111 C GLY D 446 162.978 250.796 143.040 1.00 73.02 ATOM 112 O GLY D 446 161.936 250.282 142.687 1.00 77.04 ATOM 113 N TYR D 447 163.980 250.087 143.538 1.00 68.35 ATOM 114 CA TYR D 447 163.788 248.691 143.849 1.00 79.44 ATOM 115 C TYR D 447 163.429 248.460 145.307 1.00127.07 ATOM 116 O TYR D 447 162.562 247.609 145.573 1.00125.89 ATOM 117 N ARG D 448 164.080 249.176 146.256 1.00159.33 ATOM 118 CA ARG D 448 163.818 248.969 147.693 1.00139.97 ATOM 119 C ARG D 448 162.370 249.360 147.982 1.00103.38 ATOM 120 O ARG D 448 161.692 248.723 148.734 1.00 81.58 ATOM 121 N SER D 449 161.947 250.460 147.409 1.00100.92 ATOM 122 CA SER D 449 160.584 250.911 147.620 1.00119.13 ATOM 123 C SER D 449 159.557 250.168 146.804 1.00 80.09 ATOM 124 O SER D 449 158.377 250.264 147.102 1.00 99.77 ATOM 125 N TYR D 450 159.966 249.459 145.785 1.00 62.39 ATOM 126 CA TYR D 450 158.997 248.748 144.988 1.00 75.79 ATOM 127 C TYR D 450 158.469 247.571 145.768 1.00 89.32 ATOM 128 O TYR D 450 157.258 247.273 145.761 1.00111.36 ATOM 129 N LEU D 451 159.360 246.863 146.443 1.00 91.34 ATOM 130 CA LEU D 451 158.940 245.598 146.998 1.00116.03 ATOM 131 C LEU D 451 158.283 245.790 148.358 1.00127.42 ATOM 132 O LEU D 451 157.443 244.960 148.767 1.00115.38 ATOM 133 N GLN D 452 158.653 246.875 149.065 1.00 91.36 ATOM 134 CA GLN D 452 158.023 247.196 150.337 1.00 81.47 ATOM 135 C GLN D 452 156.543 247.395 150.121 1.00 83.83 ATOM 136 O GLN D 452 155.691 246.911 150.886 1.00 76.28 ATOM 137 N ALA D 453 156.239 248.215 149.116 1.00100.77 ATOM 138 CA ALA D 453 154.856 248.456 148.741 1.00114.27 ATOM 139 C ALA D 453 154.206 247.173 148.248 1.00 84.92 ATOM 140 O ALA D 453 152.989 247.001 148.392 1.00 92.22 ATOM 141 N TYR D 454 154.985 246.286 147.652 1.00 62.38 ATOM 142 CA TYR D 454 154.440 245.028 147.228 1.00 71.82 ATOM 143 C TYR D 454 154.083 244.176 148.421 1.00 82.03 ATOM 144 O TYR D 454 153.157 243.365 148.342 1.00100.34 ATOM 145 N ALA D 455 154.804 244.309 149.525 1.00 82.80 ATOM 146 CA ALA D 455 154.469 243.532 150.712 1.00 97.72 ATOM 147 C ALA D 455 153.362 244.195 151.543 1.00106.48 ATOM 148 O ALA D 455 152.554 243.502 152.167 1.00 78.46 ATOM 149 N SER D 456 153.328 245.531 151.534 1.00119.98 ATOM 150 CA SER D 456 152.343 246.281 152.285 1.00126.21 ATOM 151 C SER D 456 151.040 246.422 151.532 1.00123.63 ATOM 152 O SER D 456 150.519 247.525 151.340 1.00127.14 ATOM 153 N HIS D 457 150.480 245.317 151.092 1.00124.39 ATOM 154 CA HIS D 457 149.327 245.370 150.220 1.00125.08 ATOM 155 C HIS D 457 148.213 244.588 150.859 1.00101.97 ATOM 156 O HIS D 457 148.402 243.942 151.898 1.00134.29 ATOM 157 N SER D 458 147.058 244.602 150.230 1.00101.30 ATOM 158 CA SER D 458 145.932 243.863 150.761 1.00130.29 ATOM 159 C SER D 458 145.921 242.359 150.444 1.00116.61 ATOM 160 O SER D 458 145.834 241.542 151.342 1.00102.12 ATOM 161 N LEU D 459 146.012 242.012 149.180 1.00116.07 ATOM 162 CA LEU D 459 145.504 240.729 148.723 1.00146.11 ATOM 163 C LEU D 459 146.373 239.528 149.054 1.00157.32 ATOM 164 O LEU D 459 147.573 239.636 149.142 1.00108.78 ATOM 165 N LYS D 460 145.720 238.388 149.203 1.00184.49 ATOM 166 CA LYS D 460 146.360 237.099 149.458 1.00178.24 ATOM 167 C LYS D 460 147.129 236.629 148.245 1.00172.63 ATOM 168 O LYS D 460 148.110 235.900 148.384 1.00174.90 ATOM 169 N THR D 461 146.691 237.039 147.061 1.00173.78 ATOM 170 CA THR D 461 147.412 236.715 145.831 1.00165.75 ATOM 171 C THR D 461 148.733 237.490 145.772 1.00169.32 ATOM 172 O THR D 461 149.798 236.888 145.629 1.00149.66 ATOM 173 N VAL D 462 148.653 238.809 145.917 1.00143.83 ATOM 174 CA VAL D 462 149.814 239.689 145.764 1.00116.17 ATOM 175 C VAL D 462 150.514 239.764 147.113 1.00118.77 ATOM 176 O VAL D 462 150.302 240.745 147.855 1.00120.77 ATOM 177 N TYR D 463 151.246 238.691 147.451 1.00121.34 ATOM 178 CA TYR D 463 152.048 238.581 148.675 1.00144.36 ATOM 179 C TYR D 463 153.309 237.766 148.413 1.00107.74 ATOM 180 O TYR D 463 153.359 236.567 148.627 1.00112.19 ATOM 181 N GLN D 464 154.362 238.459 148.017 1.00 99.52 ATOM 182 CA GLN D 464 155.781 238.021 148.123 1.00103.59 ATOM 183 C GLN D 464 156.179 236.601 147.639 1.00123.87 ATOM 184 O GLN D 464 157.171 236.042 148.045 1.00 84.40 ATOM 185 N ILE D 465 155.386 236.043 146.747 1.00159.94 ATOM 186 CA ILE D 465 155.666 234.732 146.175 1.00147.53 ATOM 187 C ILE D 465 156.728 234.929 145.079 1.00153.07 ATOM 188 O ILE D 465 157.577 234.032 144.885 1.00151.36 ATOM 189 N ASP D 466 156.678 236.078 144.390 1.00142.21 ATOM 190 CA ASP D 466 157.437 236.329 143.163 1.00129.12 ATOM 191 C ASP D 466 158.924 236.257 143.362 1.00130.80 ATOM 192 O ASP D 466 159.434 236.677 144.401 1.00129.96 ATOM 193 N LYS D 467 159.624 235.680 142.393 1.00171.63 ATOM 194 CA LYS D 467 161.057 235.471 142.583 1.00197.38 ATOM 195 C LYS D 467 161.825 236.735 142.263 1.00132.10 ATOM 196 O LYS D 467 161.562 237.391 141.308 1.00 94.75 ATOM 197 N LEU D 468 162.819 237.023 143.084 1.00 96.67 ATOM 198 CA LEU D 468 163.502 238.274 143.059 1.00 81.25 ATOM 199 C LEU D 468 164.570 238.289 141.982 1.00 69.86 ATOM 200 O LEU D 468 165.224 239.321 141.752 1.00 53.71 ATOM 201 N ASP D 469 164.784 237.161 141.315 1.00 71.10 ATOM 202 CA ASP D 469 165.681 237.180 140.201 1.00 90.99 ATOM 203 C ASP D 469 165.133 237.992 139.048 1.00 68.88 ATOM 204 O ASP D 469 165.891 238.446 138.192 1.00 68.87 ATOM 205 N LEU D 470 163.831 238.133 138.951 1.00 61.11 ATOM 206 CA LEU D 470 163.273 238.754 137.799 1.00 77.28 ATOM 207 C LEU D 470 162.757 240.146 138.042 1.00 59.71 ATOM 208 O LEU D 470 162.678 240.931 137.102 1.00 67.62 ATOM 209 N ALA D 471 162.400 240.492 139.251 1.00 54.68 ATOM 210 CA ALA D 471 162.016 241.876 139.533 1.00 70.56 ATOM 211 C ALA D 471 163.236 242.809 139.535 1.00 75.74 ATOM 212 O ALA D 471 163.125 243.986 139.277 1.00 72.41 ATOM 213 N LYS D 472 164.408 242.266 139.802 1.00 96.03 ATOM 214 CA LYS D 472 165.620 243.054 139.651 1.00100.06 ATOM 215 C LYS D 472 165.908 243.342 138.183 1.00 86.96 ATOM 216 O LYS D 472 166.617 244.286 137.868 1.00 68.05 ATOM 217 N VAL D 473 165.394 242.505 137.291 1.00 99.18 ATOM 218 CA VAL D 473 165.629 242.615 135.867 1.00104.59 ATOM 219 C VAL D 473 164.619 243.590 135.294 1.00 85.63 ATOM 220 O VAL D 473 164.890 244.253 134.298 1.00 97.65 ATOM 221 N ALA D 474 163.473 243.726 135.929 1.00 77.15 ATOM 222 CA ALA D 474 162.578 244.820 135.619 1.00 92.87 ATOM 223 C ALA D 474 163.248 246.160 135.901 1.00110.02 ATOM 224 O ALA D 474 162.972 247.136 135.215 1.00134.49 ATOM 225 N LYS D 475 164.128 246.225 136.890 1.00102.05 ATOM 226 CA LYS D 475 165.026 247.375 136.995 1.00102.06 ATOM 227 C LYS D 475 166.428 247.067 136.489 1.00118.07 ATOM 228 O LYS D 475 167.317 247.865 136.699 1.00139.49 ATOM 229 N SER D 476 166.617 245.912 135.853 1.00112.77 ATOM 230 CA SER D 476 167.852 245.515 135.180 1.00142.86 ATOM 231 C SER D 476 169.081 245.482 136.065 1.00140.42 ATOM 232 O SER D 476 169.933 246.357 135.956 1.00151.95 ATOM 233 N TYR D 477 169.176 244.524 136.980 1.00107.43 ATOM 234 CA TYR D 477 170.445 244.297 137.679 1.00 86.09 ATOM 235 C TYR D 477 171.065 242.967 137.221 1.00 96.91 ATOM 236 O TYR D 477 170.477 242.213 136.457 1.00 94.29 ATOM 237 N GLY D 478 172.270 242.709 137.691 1.00 91.31 ATOM 238 CA GLY D 478 172.853 241.404 137.626 1.00 88.37 ATOM 239 C GLY D 478 172.503 240.644 138.896 1.00 97.21 ATOM 240 O GLY D 478 172.371 239.407 138.890 1.00100.01 ATOM 241 N PHE D 479 172.364 241.376 139.991 1.00106.60 ATOM 242 CA PHE D 479 172.113 240.808 141.296 1.00105.04 ATOM 243 C PHE D 479 171.140 241.669 142.081 1.00 75.46 ATOM 244 O PHE D 479 171.247 242.878 142.063 1.00 60.91 ATOM 245 N PRO D 480 170.184 241.033 142.758 1.00 56.90 ATOM 246 CA PRO D 480 169.038 241.774 143.267 1.00 55.65 ATOM 247 C PRO D 480 169.328 242.502 144.548 1.00 52.72 ATOM 248 O PRO D 480 168.592 242.356 145.501 1.00 60.29 ATOM 249 N VAL D 481 170.376 243.302 144.551 1.00 56.52 ATOM 250 CA VAL D 481 170.608 244.299 145.593 1.00 73.72 ATOM 251 C VAL D 481 170.515 243.843 147.075 1.00 68.13 ATOM 252 O VAL D 481 169.451 243.771 147.689 1.00 42.94 TER