HEADER RIBOSOME 31-DEC-69 6EM4 TITLE State B architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the TITLE 2 assembly pathway of nucleolar pre-60S ribosomes COMPND MOL_ID: 31; COMPND 2 MOLECULE: ATP-dependent RNA helicase HAS1; COMPND 3 CHAIN: D; COMPND 4 EC: 3.6.4.13; COMPND 5 Backbone model; EXPDTA ELECTRON MICROSCOPY DBREF 6EM4 D 1 505 UNP Q03532 HAS1_YEAST 1 505 SEQRES 1 D 63 GLU ASN LYS ILE ALA ASN VAL GLN SER GLN LEU GLU LYS SEQRES 2 D 63 LEU ILE LYS SER ASN TYR TYR LEU HIS GLN THR ALA LYS SEQRES 3 D 63 ASP GLY TYR ARG SER TYR LEU GLN ALA TYR ALA SER HIS SEQRES 4 D 63 SER LEU LYS THR VAL TYR GLN ILE ASP LYS LEU ASP LEU SEQRES 5 D 63 ALA LYS VAL ALA LYS SER TYR GLY PHE PRO VAL ATOM 1 N GLU D 419 157.333 241.356 120.494 1.00218.10 ATOM 2 CA GLU D 419 158.303 241.389 121.589 1.00238.74 ATOM 3 C GLU D 419 159.686 241.870 121.172 1.00187.48 ATOM 4 O GLU D 419 160.486 242.308 121.975 1.00160.71 ATOM 5 N ASN D 420 159.967 241.788 119.885 1.00179.52 ATOM 6 CA ASN D 420 161.299 242.128 119.368 1.00154.38 ATOM 7 C ASN D 420 161.358 243.559 118.887 1.00152.99 ATOM 8 O ASN D 420 162.221 243.904 118.082 1.00142.18 ATOM 9 N LYS D 421 160.441 244.400 119.360 1.00151.15 ATOM 10 CA LYS D 421 160.380 245.786 118.925 1.00142.32 ATOM 11 C LYS D 421 160.905 246.772 119.943 1.00111.59 ATOM 12 O LYS D 421 161.099 247.952 119.599 1.00 87.74 ATOM 13 N ILE D 422 161.146 246.312 121.163 1.00 98.43 ATOM 14 CA ILE D 422 161.603 247.191 122.237 1.00 95.12 ATOM 15 C ILE D 422 162.984 247.730 121.931 1.00 96.49 ATOM 16 O ILE D 422 163.812 247.068 121.301 1.00114.38 ATOM 17 N ALA D 423 163.225 248.945 122.359 1.00104.30 ATOM 18 CA ALA D 423 164.437 249.643 121.984 1.00124.17 ATOM 19 C ALA D 423 165.607 249.068 122.705 1.00105.30 ATOM 20 O ALA D 423 165.510 248.740 123.886 1.00107.98 ATOM 21 N ASN D 424 166.736 248.967 122.002 1.00129.33 ATOM 22 CA ASN D 424 167.931 248.389 122.577 1.00159.19 ATOM 23 C ASN D 424 168.822 249.504 123.132 1.00124.04 ATOM 24 O ASN D 424 169.872 249.852 122.602 1.00144.06 ATOM 25 N VAL D 425 168.369 250.064 124.232 1.00 78.78 ATOM 26 CA VAL D 425 169.026 251.141 124.857 1.00 81.25 ATOM 27 C VAL D 425 169.620 250.610 126.141 1.00 96.47 ATOM 28 O VAL D 425 170.365 251.337 126.834 1.00132.21 ATOM 29 N GLN D 426 169.367 249.345 126.468 1.00 99.62 ATOM 30 CA GLN D 426 169.907 248.823 127.728 1.00108.90 ATOM 31 C GLN D 426 171.441 248.684 127.741 1.00108.33 ATOM 32 O GLN D 426 172.099 248.840 128.744 1.00115.74 ATOM 33 N SER D 427 171.987 248.447 126.576 1.00143.55 ATOM 34 CA SER D 427 173.422 248.621 126.348 1.00158.93 ATOM 35 C SER D 427 173.875 250.066 126.582 1.00130.73 ATOM 36 O SER D 427 174.930 250.290 127.125 1.00136.89 ATOM 37 N GLN D 428 173.081 251.042 126.157 1.00136.06 ATOM 38 CA GLN D 428 173.433 252.450 126.367 1.00145.99 ATOM 39 C GLN D 428 173.265 252.848 127.815 1.00107.23 ATOM 40 O GLN D 428 173.997 253.685 128.313 1.00 97.95 ATOM 41 N LEU D 429 172.337 252.209 128.499 1.00 95.52 ATOM 42 CA LEU D 429 171.974 252.662 129.821 1.00118.72 ATOM 43 C LEU D 429 172.923 252.141 130.878 1.00112.45 ATOM 44 O LEU D 429 173.222 252.848 131.853 1.00117.04 ATOM 45 N GLU D 430 173.406 250.920 130.690 1.00110.81 ATOM 46 CA GLU D 430 174.265 250.285 131.672 1.00105.12 ATOM 47 C GLU D 430 175.627 250.948 131.736 1.00 94.94 ATOM 48 O GLU D 430 176.224 251.034 132.805 1.00 81.40 ATOM 49 N LYS D 431 176.119 251.406 130.590 1.00121.31 ATOM 50 CA LYS D 431 177.270 252.299 130.574 1.00159.28 ATOM 51 C LYS D 431 176.910 253.611 131.260 1.00152.91 ATOM 52 O LYS D 431 177.716 254.201 131.986 1.00157.50 ATOM 53 N LEU D 432 175.699 254.079 131.010 1.00126.31 ATOM 54 CA LEU D 432 175.286 255.366 131.506 1.00117.10 ATOM 55 C LEU D 432 174.977 255.351 132.972 1.00 97.96 ATOM 56 O LEU D 432 175.153 256.350 133.656 1.00134.27 ATOM 57 N ILE D 433 174.597 254.208 133.513 1.00 97.15 ATOM 58 CA ILE D 433 174.303 254.152 134.949 1.00101.02 ATOM 59 C ILE D 433 175.595 254.030 135.764 1.00 99.65 ATOM 60 O ILE D 433 175.576 254.096 136.996 1.00 90.43 ATOM 61 N LYS D 434 176.738 253.909 135.077 1.00107.57 ATOM 62 CA LYS D 434 177.999 253.714 135.736 1.00119.90 ATOM 63 C LYS D 434 178.936 254.882 135.585 1.00 99.16 ATOM 64 O LYS D 434 180.096 254.781 136.009 1.00114.19 ATOM 65 N SER D 435 178.491 255.971 134.992 1.00 92.03 ATOM 66 CA SER D 435 179.490 256.898 134.507 1.00130.88 ATOM 67 C SER D 435 179.414 258.242 135.173 1.00193.23 ATOM 68 O SER D 435 180.361 259.021 135.080 1.00241.69 ATOM 69 N ASN D 436 178.314 258.506 135.880 1.00196.24 ATOM 70 CA ASN D 436 178.030 259.868 136.261 1.00182.58 ATOM 71 C ASN D 436 177.932 260.088 137.751 1.00171.20 ATOM 72 O ASN D 436 178.332 261.187 138.239 1.00132.31 ATOM 73 N TYR D 437 177.457 259.017 138.431 1.00133.54 ATOM 74 CA TYR D 437 177.239 258.925 139.877 1.00106.31 ATOM 75 C TYR D 437 176.048 259.715 140.315 1.00 87.86 ATOM 76 O TYR D 437 175.389 259.303 141.286 1.00 93.45 ATOM 77 N TYR D 438 175.683 260.788 139.611 1.00 81.17 ATOM 78 CA TYR D 438 174.428 261.429 139.920 1.00 90.73 ATOM 79 C TYR D 438 173.302 260.579 139.342 1.00 67.25 ATOM 80 O TYR D 438 172.236 260.405 139.965 1.00 69.94 ATOM 81 N LEU D 439 173.524 260.083 138.150 1.00 51.78 ATOM 82 CA LEU D 439 172.592 259.203 137.584 1.00 55.71 ATOM 83 C LEU D 439 172.668 257.897 138.290 1.00 48.51 ATOM 84 O LEU D 439 171.692 257.110 138.219 1.00 79.06 ATOM 85 N HIS D 440 173.765 257.554 138.925 1.00 45.62 ATOM 86 CA HIS D 440 173.771 256.322 139.695 1.00 60.03 ATOM 87 C HIS D 440 173.034 256.495 141.002 1.00 59.19 ATOM 88 O HIS D 440 172.345 255.583 141.448 1.00 55.22 ATOM 89 N GLN D 441 173.193 257.643 141.636 1.00 67.06 ATOM 90 CA GLN D 441 172.473 257.885 142.873 1.00 86.01 ATOM 91 C GLN D 441 170.977 257.909 142.609 1.00 89.20 ATOM 92 O GLN D 441 170.205 257.296 143.360 1.00 78.27 ATOM 93 N THR D 442 170.531 258.638 141.594 1.00 97.28 ATOM 94 CA THR D 442 169.110 258.726 141.315 1.00101.37 ATOM 95 C THR D 442 168.533 257.437 140.763 1.00 71.01 ATOM 96 O THR D 442 167.328 257.249 140.779 1.00 99.34 ATOM 97 N ALA D 443 169.368 256.569 140.250 1.00 52.30 ATOM 98 CA ALA D 443 168.887 255.258 139.962 1.00 59.41 ATOM 99 C ALA D 443 168.656 254.533 141.255 1.00 81.06 ATOM 100 O ALA D 443 167.761 253.653 141.357 1.00109.24 ATOM 101 N LYS D 444 169.477 254.812 142.263 1.00100.74 ATOM 102 CA LYS D 444 169.422 254.045 143.505 1.00131.52 ATOM 103 C LYS D 444 168.190 254.432 144.287 1.00106.84 ATOM 104 O LYS D 444 167.442 253.575 144.773 1.00 84.03 ATOM 105 N ASP D 445 167.968 255.734 144.455 1.00 99.94 ATOM 106 CA ASP D 445 166.781 256.196 145.171 1.00 91.21 ATOM 107 C ASP D 445 165.552 255.825 144.423 1.00 65.91 ATOM 108 O ASP D 445 164.514 255.607 145.012 1.00 64.36 ATOM 109 N GLY D 446 165.625 255.803 143.095 1.00 76.13 ATOM 110 CA GLY D 446 164.506 255.340 142.260 1.00 70.28 ATOM 111 C GLY D 446 164.292 253.859 142.450 1.00 73.02 ATOM 112 O GLY D 446 163.241 253.369 142.090 1.00 77.04 ATOM 113 N TYR D 447 165.270 253.127 142.965 1.00 68.35 ATOM 114 CA TYR D 447 165.038 251.741 143.284 1.00 79.44 ATOM 115 C TYR D 447 164.658 251.532 144.741 1.00127.07 ATOM 116 O TYR D 447 163.765 250.704 145.004 1.00125.89 ATOM 117 N ARG D 448 165.317 252.237 145.690 1.00159.33 ATOM 118 CA ARG D 448 165.035 252.049 147.127 1.00139.97 ATOM 119 C ARG D 448 163.596 252.480 147.397 1.00103.38 ATOM 120 O ARG D 448 162.893 251.868 148.147 1.00 81.58 ATOM 121 N SER D 449 163.207 253.586 146.810 1.00100.92 ATOM 122 CA SER D 449 161.855 254.074 147.004 1.00119.13 ATOM 123 C SER D 449 160.817 253.352 146.183 1.00 80.09 ATOM 124 O SER D 449 159.637 253.481 146.467 1.00 99.77 ATOM 125 N TYR D 450 161.218 252.623 145.175 1.00 62.39 ATOM 126 CA TYR D 450 160.238 251.932 144.373 1.00 75.79 ATOM 127 C TYR D 450 159.671 250.776 145.157 1.00 89.32 ATOM 128 O TYR D 450 158.454 250.510 145.139 1.00111.36 ATOM 129 N LEU D 451 160.536 250.051 145.846 1.00 91.34 ATOM 130 CA LEU D 451 160.079 248.801 146.407 1.00116.03 ATOM 131 C LEU D 451 159.412 249.022 147.759 1.00127.42 ATOM 132 O LEU D 451 158.547 248.217 148.165 1.00115.38 ATOM 133 N GLN D 452 159.804 250.102 148.461 1.00 91.36 ATOM 134 CA GLN D 452 159.169 250.451 149.724 1.00 81.47 ATOM 135 C GLN D 452 157.697 250.686 149.490 1.00 83.83 ATOM 136 O GLN D 452 156.825 250.231 150.250 1.00 76.28 ATOM 137 N ALA D 453 157.426 251.505 148.476 1.00100.77 ATOM 138 CA ALA D 453 156.053 251.780 148.084 1.00114.27 ATOM 139 C ALA D 453 155.374 250.510 147.595 1.00 84.92 ATOM 140 O ALA D 453 154.152 250.371 147.726 1.00 92.22 ATOM 141 N TYR D 454 156.135 249.599 147.015 1.00 62.38 ATOM 142 CA TYR D 454 155.562 248.352 146.594 1.00 71.82 ATOM 143 C TYR D 454 155.171 247.518 147.790 1.00 82.03 ATOM 144 O TYR D 454 154.224 246.732 147.708 1.00100.34 ATOM 145 N ALA D 455 155.884 247.642 148.901 1.00 82.80 ATOM 146 CA ALA D 455 155.516 246.884 150.090 1.00 97.72 ATOM 147 C ALA D 455 154.418 247.583 150.904 1.00106.48 ATOM 148 O ALA D 455 153.586 246.916 151.525 1.00 78.46 ATOM 149 N SER D 456 154.420 248.919 150.884 1.00119.98 ATOM 150 CA SER D 456 153.448 249.701 151.619 1.00126.21 ATOM 151 C SER D 456 152.156 249.870 150.850 1.00123.63 ATOM 152 O SER D 456 151.667 250.985 150.645 1.00127.14 ATOM 153 N HIS D 457 151.572 248.775 150.414 1.00124.39 ATOM 154 CA HIS D 457 150.429 248.852 149.529 1.00125.08 ATOM 155 C HIS D 457 149.288 248.104 150.163 1.00101.97 ATOM 156 O HIS D 457 149.450 247.463 151.210 1.00134.29 ATOM 157 N SER D 458 148.141 248.143 149.522 1.00101.30 ATOM 158 CA SER D 458 146.991 247.439 150.047 1.00130.29 ATOM 159 C SER D 458 146.943 245.934 149.742 1.00116.61 ATOM 160 O SER D 458 146.825 245.126 150.645 1.00102.12 ATOM 161 N LEU D 459 147.038 245.574 148.482 1.00116.07 ATOM 162 CA LEU D 459 146.501 244.300 148.029 1.00146.11 ATOM 163 C LEU D 459 147.336 243.080 148.380 1.00157.32 ATOM 164 O LEU D 459 148.537 243.157 148.478 1.00108.78 ATOM 165 N LYS D 460 146.651 241.958 148.530 1.00184.49 ATOM 166 CA LYS D 460 147.255 240.655 148.803 1.00178.24 ATOM 167 C LYS D 460 148.023 240.156 147.601 1.00172.63 ATOM 168 O LYS D 460 148.983 239.402 147.757 1.00174.90 ATOM 169 N THR D 461 147.609 240.568 146.409 1.00173.78 ATOM 170 CA THR D 461 148.332 240.214 145.190 1.00165.75 ATOM 171 C THR D 461 149.675 240.954 145.139 1.00169.32 ATOM 172 O THR D 461 150.724 240.322 145.011 1.00149.66 ATOM 173 N VAL D 462 149.628 242.276 145.273 1.00143.83 ATOM 174 CA VAL D 462 150.813 243.124 145.124 1.00116.17 ATOM 175 C VAL D 462 151.501 243.191 146.480 1.00118.77 ATOM 176 O VAL D 462 151.307 244.184 147.212 1.00120.77 ATOM 177 N TYR D 463 152.202 242.102 146.835 1.00121.34 ATOM 178 CA TYR D 463 152.986 241.981 148.067 1.00144.36 ATOM 179 C TYR D 463 154.229 241.132 147.826 1.00107.74 ATOM 180 O TYR D 463 154.245 239.933 148.050 1.00112.19 ATOM 181 N GLN D 464 155.304 241.793 147.435 1.00 99.52 ATOM 182 CA GLN D 464 156.710 241.318 147.558 1.00103.59 ATOM 183 C GLN D 464 157.075 239.885 147.090 1.00123.87 ATOM 184 O GLN D 464 158.047 239.304 147.512 1.00 84.40 ATOM 185 N ILE D 465 156.277 239.341 146.195 1.00159.94 ATOM 186 CA ILE D 465 156.529 238.018 145.637 1.00147.53 ATOM 187 C ILE D 465 157.606 238.178 144.550 1.00153.07 ATOM 188 O ILE D 465 158.434 237.258 144.372 1.00151.36 ATOM 189 N ASP D 466 157.593 239.322 143.851 1.00142.21 ATOM 190 CA ASP D 466 158.372 239.544 142.630 1.00129.12 ATOM 191 C ASP D 466 159.854 239.434 142.846 1.00130.80 ATOM 192 O ASP D 466 160.365 239.849 143.888 1.00129.96 ATOM 193 N LYS D 467 160.549 238.832 141.889 1.00171.63 ATOM 194 CA LYS D 467 161.973 238.586 142.096 1.00197.38 ATOM 195 C LYS D 467 162.778 239.826 141.774 1.00132.10 ATOM 196 O LYS D 467 162.542 240.482 140.812 1.00 94.75 ATOM 197 N LEU D 468 163.771 240.096 142.602 1.00 96.67 ATOM 198 CA LEU D 468 164.486 241.328 142.574 1.00 81.25 ATOM 199 C LEU D 468 165.566 241.306 141.509 1.00 69.86 ATOM 200 O LEU D 468 166.249 242.319 141.278 1.00 53.71 ATOM 201 N ASP D 469 165.757 240.168 140.854 1.00 71.10 ATOM 202 CA ASP D 469 166.666 240.154 139.749 1.00 90.99 ATOM 203 C ASP D 469 166.150 240.970 138.584 1.00 68.88 ATOM 204 O ASP D 469 166.929 241.398 137.732 1.00 68.87 ATOM 205 N LEU D 470 164.854 241.144 138.472 1.00 61.11 ATOM 206 CA LEU D 470 164.325 241.771 137.310 1.00 77.28 ATOM 207 C LEU D 470 163.843 243.178 137.536 1.00 59.71 ATOM 208 O LEU D 470 163.794 243.956 136.588 1.00 67.62 ATOM 209 N ALA D 471 163.482 243.543 138.738 1.00 54.68 ATOM 210 CA ALA D 471 163.132 244.938 139.005 1.00 70.56 ATOM 211 C ALA D 471 164.376 245.839 139.012 1.00 75.74 ATOM 212 O ALA D 471 164.298 247.016 138.744 1.00 72.41 ATOM 213 N LYS D 472 165.531 245.268 139.296 1.00 96.03 ATOM 214 CA LYS D 472 166.764 246.023 139.151 1.00100.06 ATOM 215 C LYS D 472 167.075 246.291 137.685 1.00 86.96 ATOM 216 O LYS D 472 167.811 247.214 137.369 1.00 68.05 ATOM 217 N VAL D 473 166.548 245.461 136.793 1.00 99.18 ATOM 218 CA VAL D 473 166.801 245.553 135.371 1.00104.59 ATOM 219 C VAL D 473 165.822 246.549 134.779 1.00 85.63 ATOM 220 O VAL D 473 166.121 247.197 133.781 1.00 97.65 ATOM 221 N ALA D 474 164.675 246.720 135.403 1.00 77.15 ATOM 222 CA ALA D 474 163.812 247.835 135.073 1.00 92.87 ATOM 223 C ALA D 474 164.513 249.159 135.352 1.00110.02 ATOM 224 O ALA D 474 164.270 250.136 134.655 1.00134.49 ATOM 225 N LYS D 475 165.385 249.209 136.350 1.00102.05 ATOM 226 CA LYS D 475 166.312 250.335 136.455 1.00102.06 ATOM 227 C LYS D 475 167.710 249.987 135.966 1.00118.07 ATOM 228 O LYS D 475 168.618 250.762 136.179 1.00139.49 ATOM 229 N SER D 476 167.875 248.822 135.341 1.00112.77 ATOM 230 CA SER D 476 169.106 248.388 134.684 1.00142.86 ATOM 231 C SER D 476 170.324 248.329 135.583 1.00140.42 ATOM 232 O SER D 476 171.200 249.181 135.475 1.00151.95 ATOM 233 N TYR D 477 170.385 247.377 136.506 1.00107.43 ATOM 234 CA TYR D 477 171.640 247.123 137.221 1.00 86.09 ATOM 235 C TYR D 477 172.230 245.773 136.779 1.00 96.91 ATOM 236 O TYR D 477 171.630 245.028 136.016 1.00 94.29 ATOM 237 N GLY D 478 173.423 245.487 137.264 1.00 91.31 ATOM 238 CA GLY D 478 173.972 244.168 137.215 1.00 88.37 ATOM 239 C GLY D 478 173.589 243.427 138.489 1.00 97.21 ATOM 240 O GLY D 478 173.425 242.194 138.491 1.00100.01 ATOM 241 N PHE D 479 173.458 244.171 139.576 1.00106.60 ATOM 242 CA PHE D 479 173.179 243.621 140.883 1.00105.04 ATOM 243 C PHE D 479 172.221 244.513 141.651 1.00 75.46 ATOM 244 O PHE D 479 172.360 245.718 141.624 1.00 60.91 ATOM 245 N PRO D 480 171.242 243.908 142.322 1.00 56.90 ATOM 246 CA PRO D 480 170.109 244.684 142.814 1.00 55.65 ATOM 247 C PRO D 480 170.405 245.415 144.092 1.00 52.72 ATOM 248 O PRO D 480 169.657 245.294 145.038 1.00 60.29 ATOM 249 N VAL D 481 171.475 246.186 144.100 1.00 56.52 ATOM 250 CA VAL D 481 171.721 247.185 145.135 1.00 73.72 ATOM 251 C VAL D 481 171.602 246.745 146.620 1.00 68.13 ATOM 252 O VAL D 481 170.530 246.706 147.224 1.00 42.94 TER