HEADER RIBOSOME 31-DEC-69 6EM5 TITLE State D architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the TITLE 2 assembly pathway of nucleolar pre-60S ribosomes COMPND MOL_ID: 33; COMPND 2 MOLECULE: ATP-dependent RNA helicase HAS1; COMPND 3 CHAIN: D; COMPND 4 EC: 3.6.4.13; COMPND 5 Backbone model; EXPDTA ELECTRON MICROSCOPY DBREF 6EM5 D 1 505 UNP Q03532 HAS1_YEAST 1 505 SEQRES 1 D 63 GLU ASN LYS ILE ALA ASN VAL GLN SER GLN LEU GLU LYS SEQRES 2 D 63 LEU ILE LYS SER ASN TYR TYR LEU HIS GLN THR ALA LYS SEQRES 3 D 63 ASP GLY TYR ARG SER TYR LEU GLN ALA TYR ALA SER HIS SEQRES 4 D 63 SER LEU LYS THR VAL TYR GLN ILE ASP LYS LEU ASP LEU SEQRES 5 D 63 ALA LYS VAL ALA LYS SER TYR GLY PHE PRO VAL ATOM 1 N GLU D 419 165.218 244.735 115.461 1.00164.04 ATOM 2 CA GLU D 419 166.390 244.508 116.314 1.00159.80 ATOM 3 C GLU D 419 167.698 245.023 115.704 1.00155.49 ATOM 4 O GLU D 419 168.659 245.290 116.431 1.00154.96 ATOM 5 N ASN D 420 167.718 245.169 114.379 1.00150.26 ATOM 6 CA ASN D 420 168.942 245.473 113.629 1.00144.40 ATOM 7 C ASN D 420 169.279 246.963 113.520 1.00140.67 ATOM 8 O ASN D 420 170.457 247.325 113.464 1.00140.15 ATOM 9 N LYS D 421 168.251 247.814 113.492 1.00137.82 ATOM 10 CA LYS D 421 168.435 249.244 113.197 1.00135.62 ATOM 11 C LYS D 421 168.540 250.193 114.406 1.00132.22 ATOM 12 O LYS D 421 168.292 251.401 114.284 1.00131.98 ATOM 13 N ILE D 422 168.920 249.646 115.560 1.00128.74 ATOM 14 CA ILE D 422 169.326 250.463 116.713 1.00126.41 ATOM 15 C ILE D 422 170.680 251.124 116.449 1.00125.22 ATOM 16 O ILE D 422 171.541 250.532 115.789 1.00125.76 ATOM 17 N ALA D 423 170.847 252.348 116.954 1.00122.16 ATOM 18 CA ALA D 423 172.084 253.121 116.785 1.00119.54 ATOM 19 C ALA D 423 173.260 252.473 117.515 1.00118.52 ATOM 20 O ALA D 423 173.121 252.034 118.661 1.00118.22 ATOM 21 N ASN D 424 174.408 252.412 116.841 1.00117.95 ATOM 22 CA ASN D 424 175.614 251.781 117.388 1.00117.78 ATOM 23 C ASN D 424 176.452 252.744 118.243 1.00117.00 ATOM 24 O ASN D 424 177.678 252.825 118.102 1.00117.39 ATOM 25 N VAL D 425 175.768 253.469 119.129 1.00115.53 ATOM 26 CA VAL D 425 176.408 254.390 120.069 1.00115.12 ATOM 27 C VAL D 425 176.207 253.836 121.486 1.00114.59 ATOM 28 O VAL D 425 175.276 254.218 122.207 1.00114.37 ATOM 29 N GLN D 426 177.085 252.903 121.849 1.00113.38 ATOM 30 CA GLN D 426 177.105 252.279 123.170 1.00112.20 ATOM 31 C GLN D 426 178.546 252.214 123.671 1.00111.20 ATOM 32 O GLN D 426 178.840 252.665 124.779 1.00111.45 ATOM 33 N SER D 427 179.428 251.650 122.840 1.00111.42 ATOM 34 CA SER D 427 180.872 251.611 123.096 1.00111.80 ATOM 35 C SER D 427 181.500 253.001 122.973 1.00112.03 ATOM 36 O SER D 427 182.535 253.281 123.592 1.00112.78 ATOM 37 N GLN D 428 180.870 253.855 122.165 1.00110.87 ATOM 38 CA GLN D 428 181.194 255.279 122.089 1.00110.06 ATOM 39 C GLN D 428 180.839 255.985 123.396 1.00108.29 ATOM 40 O GLN D 428 181.553 256.891 123.824 1.00109.36 ATOM 41 N LEU D 429 179.739 255.552 124.016 1.00105.91 ATOM 42 CA LEU D 429 179.281 256.077 125.303 1.00105.25 ATOM 43 C LEU D 429 180.056 255.471 126.475 1.00104.93 ATOM 44 O LEU D 429 180.259 256.134 127.496 1.00105.16 ATOM 45 N GLU D 430 180.471 254.211 126.315 1.00105.03 ATOM 46 CA GLU D 430 181.284 253.484 127.299 1.00104.61 ATOM 47 C GLU D 430 182.691 254.081 127.420 1.00103.88 ATOM 48 O GLU D 430 183.258 254.131 128.515 1.00104.28 ATOM 49 N LYS D 431 183.244 254.517 126.289 1.00103.63 ATOM 50 CA LYS D 431 184.489 255.288 126.263 1.00103.73 ATOM 51 C LYS D 431 184.266 256.703 126.801 1.00102.38 ATOM 52 O LYS D 431 185.147 257.269 127.457 1.00101.59 ATOM 53 N LEU D 432 183.084 257.253 126.521 1.00102.64 ATOM 54 CA LEU D 432 182.724 258.624 126.889 1.00103.93 ATOM 55 C LEU D 432 182.458 258.802 128.386 1.00103.62 ATOM 56 O LEU D 432 182.702 259.885 128.931 1.00103.71 ATOM 57 N ILE D 433 181.961 257.750 129.040 1.00103.42 ATOM 58 CA ILE D 433 181.645 257.796 130.477 1.00104.47 ATOM 59 C ILE D 433 182.901 257.787 131.367 1.00102.18 ATOM 60 O ILE D 433 182.988 258.554 132.331 1.00101.30 ATOM 61 N LYS D 434 183.874 256.946 131.015 1.00101.08 ATOM 62 CA LYS D 434 185.061 256.708 131.841 1.00 99.06 ATOM 63 C LYS D 434 186.214 257.681 131.533 1.00 96.06 ATOM 64 O LYS D 434 187.386 257.374 131.787 1.00 97.10 ATOM 65 N SER D 435 185.868 258.859 131.012 1.00 91.61 ATOM 66 CA SER D 435 186.855 259.837 130.552 1.00 90.08 ATOM 67 C SER D 435 186.405 261.299 130.722 1.00 91.27 ATOM 68 O SER D 435 186.956 262.202 130.077 1.00 92.71 ATOM 69 N ASN D 436 185.428 261.533 131.601 1.00 90.90 ATOM 70 CA ASN D 436 184.885 262.884 131.823 1.00 90.52 ATOM 71 C ASN D 436 184.711 263.270 133.298 1.00 90.70 ATOM 72 O ASN D 436 184.733 264.458 133.637 1.00 90.49 ATOM 73 N TYR D 437 184.551 262.257 134.153 1.00 90.17 ATOM 74 CA TYR D 437 184.218 262.390 135.586 1.00 90.67 ATOM 75 C TYR D 437 182.837 262.976 135.890 1.00 93.08 ATOM 76 O TYR D 437 182.097 262.386 136.679 1.00 96.28 ATOM 77 N TYR D 438 182.513 264.137 135.313 1.00 92.35 ATOM 78 CA TYR D 438 181.218 264.792 135.550 1.00 91.89 ATOM 79 C TYR D 438 180.061 263.925 135.063 1.00 91.52 ATOM 80 O TYR D 438 179.018 263.840 135.721 1.00 91.72 ATOM 81 N LEU D 439 180.263 263.290 133.913 1.00 91.40 ATOM 82 CA LEU D 439 179.283 262.375 133.344 1.00 92.07 ATOM 83 C LEU D 439 179.342 260.982 133.973 1.00 89.52 ATOM 84 O LEU D 439 178.406 260.198 133.818 1.00 89.90 ATOM 85 N HIS D 440 180.434 260.690 134.683 1.00 87.26 ATOM 86 CA HIS D 440 180.524 259.487 135.515 1.00 87.42 ATOM 87 C HIS D 440 179.695 259.647 136.789 1.00 86.82 ATOM 88 O HIS D 440 179.041 258.697 137.226 1.00 86.87 ATOM 89 N GLN D 441 179.727 260.849 137.368 1.00 87.12 ATOM 90 CA GLN D 441 178.966 261.177 138.581 1.00 87.54 ATOM 91 C GLN D 441 177.463 261.302 138.317 1.00 86.90 ATOM 92 O GLN D 441 176.658 260.807 139.110 1.00 86.44 ATOM 93 N THR D 442 177.095 261.963 137.213 1.00 85.04 ATOM 94 CA THR D 442 175.681 262.127 136.830 1.00 83.78 ATOM 95 C THR D 442 175.035 260.804 136.388 1.00 84.55 ATOM 96 O THR D 442 173.835 260.605 136.598 1.00 85.35 ATOM 97 N ALA D 443 175.831 259.914 135.790 1.00 83.62 ATOM 98 CA ALA D 443 175.390 258.547 135.483 1.00 83.42 ATOM 99 C ALA D 443 175.255 257.701 136.739 1.00 84.91 ATOM 100 O ALA D 443 174.348 256.870 136.830 1.00 85.31 ATOM 101 N LYS D 444 176.175 257.909 137.687 1.00 88.11 ATOM 102 CA LYS D 444 176.158 257.248 138.996 1.00 90.97 ATOM 103 C LYS D 444 174.850 257.560 139.728 1.00 91.55 ATOM 104 O LYS D 444 174.158 256.645 140.181 1.00 91.73 ATOM 105 N ASP D 445 174.512 258.848 139.805 1.00 91.38 ATOM 106 CA ASP D 445 173.271 259.299 140.436 1.00 91.86 ATOM 107 C ASP D 445 172.084 259.353 139.465 1.00 92.21 ATOM 108 O ASP D 445 170.997 259.823 139.818 1.00 94.35 ATOM 109 N GLY D 446 172.306 258.864 138.246 1.00 91.49 ATOM 110 CA GLY D 446 171.229 258.552 137.311 1.00 90.93 ATOM 111 C GLY D 446 170.732 257.144 137.579 1.00 89.46 ATOM 112 O GLY D 446 169.539 256.934 137.816 1.00 88.61 ATOM 113 N TYR D 447 171.667 256.194 137.554 1.00 89.84 ATOM 114 CA TYR D 447 171.409 254.774 137.798 1.00 90.80 ATOM 115 C TYR D 447 170.836 254.505 139.187 1.00 91.31 ATOM 116 O TYR D 447 169.894 253.719 139.332 1.00 91.49 ATOM 117 N ARG D 448 171.418 255.155 140.192 1.00 94.58 ATOM 118 CA ARG D 448 171.044 254.950 141.589 1.00 98.54 ATOM 119 C ARG D 448 169.631 255.459 141.881 1.00 99.87 ATOM 120 O ARG D 448 168.821 254.727 142.457 1.00101.77 ATOM 121 N SER D 449 169.350 256.700 141.474 1.00 97.33 ATOM 122 CA SER D 449 168.069 257.351 141.755 1.00 95.31 ATOM 123 C SER D 449 166.910 256.686 141.015 1.00 94.75 ATOM 124 O SER D 449 165.806 256.585 141.560 1.00 95.81 ATOM 125 N TYR D 450 167.172 256.245 139.782 1.00 93.46 ATOM 126 CA TYR D 450 166.228 255.443 138.995 1.00 92.02 ATOM 127 C TYR D 450 165.860 254.147 139.721 1.00 90.69 ATOM 128 O TYR D 450 164.679 253.809 139.832 1.00 92.31 ATOM 129 N LEU D 451 166.876 253.445 140.221 1.00 89.19 ATOM 130 CA LEU D 451 166.689 252.156 140.882 1.00 88.52 ATOM 131 C LEU D 451 166.101 252.285 142.290 1.00 89.65 ATOM 132 O LEU D 451 165.429 251.366 142.766 1.00 90.86 ATOM 133 N GLN D 452 166.357 253.420 142.945 1.00 91.09 ATOM 134 CA GLN D 452 165.745 253.740 144.241 1.00 93.14 ATOM 135 C GLN D 452 164.250 254.035 144.105 1.00 93.70 ATOM 136 O GLN D 452 163.457 253.636 144.963 1.00 94.18 ATOM 137 N ALA D 453 163.885 254.728 143.024 1.00 93.19 ATOM 138 CA ALA D 453 162.486 255.012 142.687 1.00 92.49 ATOM 139 C ALA D 453 161.742 253.762 142.209 1.00 93.45 ATOM 140 O ALA D 453 160.526 253.657 142.383 1.00 93.35 ATOM 141 N TYR D 454 162.487 252.829 141.611 1.00 98.12 ATOM 142 CA TYR D 454 161.966 251.536 141.149 1.00102.68 ATOM 143 C TYR D 454 161.555 250.631 142.316 1.00105.88 ATOM 144 O TYR D 454 160.615 249.839 142.191 1.00106.05 ATOM 145 N ALA D 455 162.270 250.757 143.437 1.00110.66 ATOM 146 CA ALA D 455 162.008 249.980 144.654 1.00113.78 ATOM 147 C ALA D 455 160.918 250.589 145.548 1.00115.75 ATOM 148 O ALA D 455 160.289 249.869 146.334 1.00115.48 ATOM 149 N SER D 456 160.704 251.901 145.419 1.00117.05 ATOM 150 CA SER D 456 159.661 252.617 146.167 1.00119.76 ATOM 151 C SER D 456 158.324 252.698 145.399 1.00124.08 ATOM 152 O SER D 456 157.543 253.643 145.574 1.00123.34 ATOM 153 N HIS D 457 158.079 251.690 144.563 1.00130.75 ATOM 154 CA HIS D 457 156.837 251.536 143.802 1.00136.04 ATOM 155 C HIS D 457 155.818 250.718 144.619 1.00137.78 ATOM 156 O HIS D 457 156.126 250.270 145.730 1.00138.16 ATOM 157 N SER D 458 154.615 250.536 144.070 1.00137.70 ATOM 158 CA SER D 458 153.519 249.852 144.768 1.00136.19 ATOM 159 C SER D 458 152.960 248.611 144.057 1.00135.66 ATOM 160 O SER D 458 152.420 247.719 144.718 1.00135.77 ATOM 161 N LEU D 459 153.089 248.561 142.729 1.00135.76 ATOM 162 CA LEU D 459 152.559 247.454 141.915 1.00136.91 ATOM 163 C LEU D 459 153.299 246.127 142.100 1.00136.17 ATOM 164 O LEU D 459 154.471 246.109 142.488 1.00135.18 ATOM 165 N LYS D 460 152.593 245.031 141.805 1.00136.98 ATOM 166 CA LYS D 460 153.151 243.670 141.800 1.00138.23 ATOM 167 C LYS D 460 154.196 243.462 140.701 1.00140.49 ATOM 168 O LYS D 460 155.126 242.667 140.868 1.00141.67 ATOM 169 N THR D 461 154.021 244.170 139.583 1.00142.06 ATOM 170 CA THR D 461 154.937 244.113 138.436 1.00143.21 ATOM 171 C THR D 461 156.287 244.770 138.746 1.00143.91 ATOM 172 O THR D 461 157.342 244.189 138.477 1.00143.54 ATOM 173 N VAL D 462 156.234 245.973 139.318 1.00144.27 ATOM 174 CA VAL D 462 157.424 246.768 139.624 1.00144.09 ATOM 175 C VAL D 462 157.837 246.528 141.088 1.00145.52 ATOM 176 O VAL D 462 157.580 247.361 141.966 1.00145.25 ATOM 177 N TYR D 463 158.454 245.369 141.333 1.00148.96 ATOM 178 CA TYR D 463 158.964 244.988 142.661 1.00151.20 ATOM 179 C TYR D 463 160.326 244.278 142.585 1.00147.18 ATOM 180 O TYR D 463 160.423 243.070 142.844 1.00148.07 ATOM 181 N GLN D 464 161.362 245.038 142.217 1.00139.43 ATOM 182 CA GLN D 464 162.778 244.599 142.239 1.00132.61 ATOM 183 C GLN D 464 163.057 243.205 141.646 1.00131.65 ATOM 184 O GLN D 464 163.555 242.304 142.336 1.00130.48 ATOM 185 N ILE D 465 162.725 243.042 140.367 1.00131.54 ATOM 186 CA ILE D 465 162.956 241.784 139.641 1.00131.51 ATOM 187 C ILE D 465 164.103 241.948 138.632 1.00129.33 ATOM 188 O ILE D 465 164.904 241.025 138.446 1.00128.41 ATOM 189 N ASP D 466 164.178 243.128 138.010 1.00129.14 ATOM 190 CA ASP D 466 165.196 243.458 136.997 1.00129.47 ATOM 191 C ASP D 466 166.640 243.328 137.503 1.00129.64 ATOM 192 O ASP D 466 167.037 243.987 138.473 1.00130.21 ATOM 193 N LYS D 467 167.407 242.458 136.845 1.00129.21 ATOM 194 CA LYS D 467 168.816 242.241 137.194 1.00127.33 ATOM 195 C LYS D 467 169.693 243.430 136.796 1.00124.32 ATOM 196 O LYS D 467 169.412 244.125 135.814 1.00123.66 ATOM 197 N LEU D 468 170.750 243.645 137.577 1.00120.52 ATOM 198 CA LEU D 468 171.589 244.841 137.469 1.00117.89 ATOM 199 C LEU D 468 172.696 244.725 136.413 1.00117.60 ATOM 200 O LEU D 468 173.384 245.709 136.120 1.00117.17 ATOM 201 N ASP D 469 172.852 243.527 135.847 1.00118.23 ATOM 202 CA ASP D 469 173.772 243.278 134.730 1.00118.83 ATOM 203 C ASP D 469 173.250 243.834 133.398 1.00116.80 ATOM 204 O ASP D 469 173.998 243.917 132.416 1.00116.41 ATOM 205 N LEU D 470 171.969 244.204 133.375 1.00114.18 ATOM 206 CA LEU D 470 171.342 244.819 132.206 1.00111.87 ATOM 207 C LEU D 470 171.104 246.318 132.408 1.00107.88 ATOM 208 O LEU D 470 171.359 247.118 131.501 1.00107.73 ATOM 209 N ALA D 471 170.631 246.683 133.603 1.00104.51 ATOM 210 CA ALA D 471 170.296 248.068 133.960 1.00103.75 ATOM 211 C ALA D 471 171.499 249.021 133.979 1.00104.21 ATOM 212 O ALA D 471 171.335 250.234 133.797 1.00104.00 ATOM 213 N LYS D 472 172.693 248.467 134.198 1.00105.69 ATOM 214 CA LYS D 472 173.944 249.238 134.220 1.00107.18 ATOM 215 C LYS D 472 174.385 249.734 132.836 1.00105.10 ATOM 216 O LYS D 472 175.006 250.795 132.725 1.00105.16 ATOM 217 N VAL D 473 174.060 248.954 131.801 1.00101.49 ATOM 218 CA VAL D 473 174.486 249.232 130.422 1.00 98.31 ATOM 219 C VAL D 473 173.594 250.308 129.782 1.00 97.16 ATOM 220 O VAL D 473 173.965 250.913 128.768 1.00 97.92 ATOM 221 N ALA D 474 172.425 250.538 130.386 1.00 95.89 ATOM 222 CA ALA D 474 171.576 251.693 130.074 1.00 95.43 ATOM 223 C ALA D 474 172.312 252.999 130.381 1.00 94.36 ATOM 224 O ALA D 474 172.234 253.959 129.609 1.00 94.83 ATOM 225 N LYS D 475 173.026 253.012 131.508 1.00 90.89 ATOM 226 CA LYS D 475 173.889 254.128 131.898 1.00 88.18 ATOM 227 C LYS D 475 175.360 253.846 131.561 1.00 87.83 ATOM 228 O LYS D 475 176.249 254.595 131.971 1.00 86.54 ATOM 229 N SER D 476 175.589 252.766 130.807 1.00 91.45 ATOM 230 CA SER D 476 176.912 252.325 130.310 1.00 94.75 ATOM 231 C SER D 476 177.965 252.041 131.398 1.00 93.75 ATOM 232 O SER D 476 178.832 252.878 131.686 1.00 93.21 ATOM 233 N TYR D 477 177.877 250.851 131.987 1.00 92.26 ATOM 234 CA TYR D 477 178.842 250.400 132.989 1.00 92.28 ATOM 235 C TYR D 477 179.349 248.980 132.729 1.00 93.39 ATOM 236 O TYR D 477 178.695 248.191 132.042 1.00 94.41 ATOM 237 N GLY D 478 180.531 248.683 133.267 1.00 95.18 ATOM 238 CA GLY D 478 181.074 247.323 133.296 1.00 96.85 ATOM 239 C GLY D 478 180.677 246.596 134.571 1.00 97.25 ATOM 240 O GLY D 478 180.611 245.362 134.597 1.00 98.38 ATOM 241 N PHE D 479 180.426 247.373 135.625 1.00 96.54 ATOM 242 CA PHE D 479 179.946 246.878 136.919 1.00 95.27 ATOM 243 C PHE D 479 178.791 247.758 137.424 1.00 89.83 ATOM 244 O PHE D 479 178.813 248.971 137.198 1.00 90.09 ATOM 245 N PRO D 480 177.774 247.157 138.091 1.00 84.19 ATOM 246 CA PRO D 480 176.621 247.921 138.599 1.00 83.00 ATOM 247 C PRO D 480 176.946 248.896 139.748 1.00 83.41 ATOM 248 O PRO D 480 176.393 248.779 140.846 1.00 83.30 ATOM 249 N VAL D 481 177.831 249.854 139.451 1.00 84.92 ATOM 250 CA VAL D 481 178.253 250.966 140.335 1.00 86.13 ATOM 251 C VAL D 481 178.685 250.553 141.755 1.00 88.27 ATOM 252 O VAL D 481 177.868 250.439 142.672 1.00 87.72 TER