HEADER VIRUS 31-DEC-69 6IDK TITLE Cryo-EM structure of Immature Dengue virus serotype 3 in complex with TITLE 2 human antibody 1H10 Fab at pH 5.0 (Class I particle) COMPND MOL_ID: 4; COMPND 2 MOLECULE: Fab 1H10 light chain (V-region); COMPND 3 CHAIN: J, L, N; COMPND 4 ENGINEERED: YES; EXPDTA ELECTRON MICROSCOPY DBREF 6IDK L -1 114 PDB 6IDK 6IDK -1 114 SEQRES 1 L 108 VAL LEU THR GLN PRO PRO SER ALA SER GLY THR PRO GLY SEQRES 2 L 108 GLN ARG VAL THR ILE SER CYS SER GLY GLY SER SER ASN SEQRES 3 L 108 ILE GLY SER SER TYR VAL TYR TRP TYR LYS GLN VAL PRO SEQRES 4 L 108 GLY THR ALA PRO LYS LEU LEU ILE TYR ARG ASN ASN GLU SEQRES 5 L 108 ARG PRO SER GLY VAL PRO ASP ARG PHE SER GLY SER LYS SEQRES 6 L 108 SER GLY THR SER ALA SER LEU ALA ILE SER GLY LEU ARG SEQRES 7 L 108 SER GLU ASP GLU ALA ASP TYR TYR CYS ALA ALA TRP ASP SEQRES 8 L 108 ASP SER LEU ARG GLY GLN VAL PHE GLY GLY GLY THR LYS SEQRES 9 L 108 LEU THR VAL LEU ATOM 1 CA VAL L 1 97.774 -1.236 219.608 1.00 1.65 ATOM 2 CA LEU L 2 93.972 -0.897 219.971 1.00 1.37 ATOM 3 CA THR L 3 93.026 0.468 223.397 1.00 1.21 ATOM 4 CA GLN L 4 90.334 -1.285 225.423 1.00 1.19 ATOM 5 CA PRO L 5 89.040 -0.632 228.979 1.00 1.13 ATOM 6 CA PRO L 6 90.023 -3.434 231.443 1.00 1.18 ATOM 7 CA SER L 7 86.474 -4.206 232.693 1.00 1.33 ATOM 8 CA ALA L 8 82.882 -2.994 232.478 1.00 1.54 ATOM 9 CA SER L 9 80.145 -4.225 234.840 1.00 1.50 ATOM 10 CA GLY L 10 76.344 -4.350 234.474 1.00 1.52 ATOM 11 CA THR L 11 73.421 -5.824 236.395 1.00 1.59 ATOM 12 CA PRO L 12 71.192 -8.404 234.550 1.00 1.46 ATOM 13 CA GLY L 13 69.185 -6.475 231.929 1.00 1.28 ATOM 14 CA GLN L 14 71.410 -3.381 231.488 1.00 1.17 ATOM 15 CA ARG L 15 73.013 -2.291 228.216 1.00 0.87 ATOM 16 CA VAL L 16 76.826 -2.289 228.314 1.00 0.00 ATOM 17 CA THR L 17 79.115 -0.390 225.927 1.00 0.00 ATOM 18 CA ILE L 18 82.705 -1.496 225.261 1.00 0.00 ATOM 19 CA SER L 19 84.918 1.229 223.756 1.00 0.00 ATOM 20 CA CYS L 20 87.902 0.571 221.455 1.00 0.00 ATOM 21 CA SER L 21 90.216 3.534 220.799 1.00 0.90 ATOM 22 CA GLY L 22 92.414 3.295 217.687 1.00 1.54 ATOM 23 CA GLY L 23 94.510 5.324 215.237 1.00 1.95 ATOM 24 CA SER L 24 93.622 6.838 211.848 1.00 2.02 ATOM 25 CA SER L 25 95.698 4.111 210.134 1.00 2.07 ATOM 26 CA ASN L 26 93.570 1.204 211.463 1.00 2.13 ATOM 27 CA ILE L 27 90.057 2.168 212.702 1.00 2.17 ATOM 28 CA GLY L 28 89.565 5.535 210.949 1.00 2.22 ATOM 29 CA SER L 29 89.959 3.909 207.478 1.00 2.22 ATOM 30 CA SER L 30 89.140 0.167 207.769 1.00 1.99 ATOM 31 CA TYR L 31 86.481 -2.186 209.185 1.00 1.45 ATOM 32 CA VAL L 32 86.203 -3.125 212.878 1.00 0.67 ATOM 33 CA TYR L 33 85.664 -6.717 214.028 1.00 0.00 ATOM 34 CA TRP L 34 84.583 -7.928 217.489 1.00 0.00 ATOM 35 CA TYR L 35 85.133 -11.348 219.082 1.00 0.00 ATOM 36 CA LYS L 36 83.635 -13.072 222.136 1.00 1.01 ATOM 37 CA GLN L 37 85.797 -15.550 224.062 1.00 1.60 ATOM 38 CA VAL L 38 84.167 -17.702 226.742 1.00 2.08 ATOM 39 CA PRO L 39 86.841 -19.059 229.196 1.00 2.19 ATOM 40 CA GLY L 40 88.431 -22.194 227.691 1.00 2.23 ATOM 41 CA THR L 41 86.831 -21.787 224.231 1.00 2.14 ATOM 42 CA ALA L 42 88.244 -20.186 221.071 1.00 1.92 ATOM 43 CA PRO L 43 87.392 -16.508 220.227 1.00 1.46 ATOM 44 CA LYS L 44 84.128 -16.618 218.237 1.00 1.10 ATOM 45 CA LEU L 45 83.164 -13.829 215.813 1.00 0.88 ATOM 46 CA LEU L 46 80.564 -11.511 217.354 1.00 0.74 ATOM 47 CA ILE L 47 80.430 -8.513 214.961 1.00 1.07 ATOM 48 CA TYR L 48 82.110 -8.251 211.550 1.00 1.62 ATOM 49 CA ARG L 49 82.611 -5.541 208.888 1.00 2.12 ATOM 50 CA ASN L 50 81.348 -2.610 211.020 1.00 2.29 ATOM 51 CA ASN L 51 78.016 -3.644 212.617 1.00 2.44 ATOM 52 CA GLU L 52 77.187 -6.702 210.440 1.00 2.35 ATOM 53 CA ARG L 53 76.217 -9.743 212.512 1.00 2.08 ATOM 54 CA PRO L 54 76.969 -13.487 211.980 1.00 1.73 ATOM 55 CA SER L 55 74.226 -16.158 211.987 1.00 1.68 ATOM 56 CA GLY L 56 73.373 -17.212 215.564 1.00 1.52 ATOM 57 CA VAL L 57 74.464 -13.995 217.341 1.00 1.34 ATOM 58 CA PRO L 58 71.433 -12.399 219.116 1.00 1.18 ATOM 59 CA ASP L 59 70.073 -9.032 217.935 1.00 1.14 ATOM 60 CA ARG L 60 70.914 -7.569 221.390 1.00 0.83 ATOM 61 CA PHE L 61 74.586 -7.306 220.302 1.00 0.60 ATOM 62 CA SER L 62 75.288 -4.215 218.177 1.00 0.72 ATOM 63 CA GLY L 63 78.588 -2.745 216.949 1.00 0.81 ATOM 64 CA SER L 64 79.043 0.948 216.090 1.00 0.90 ATOM 65 CA LYS L 65 81.877 3.156 214.791 1.00 1.15 ATOM 66 CA SER L 66 82.456 6.933 214.691 1.00 1.24 ATOM 67 CA GLY L 67 85.813 8.355 213.545 1.00 1.17 ATOM 68 CA THR L 68 88.874 6.546 214.963 1.00 1.00 ATOM 69 CA SER L 69 86.986 4.948 217.891 1.00 0.67 ATOM 70 CA ALA L 70 84.523 2.042 217.774 1.00 0.00 ATOM 71 CA SER L 71 82.102 0.696 220.402 1.00 0.00 ATOM 72 CA LEU L 72 80.259 -2.579 221.052 1.00 0.00 ATOM 73 CA ALA L 73 76.828 -2.356 222.727 1.00 0.00 ATOM 74 CA ILE L 74 75.373 -5.360 224.584 1.00 0.00 ATOM 75 CA SER L 75 71.727 -4.783 225.600 1.00 0.00 ATOM 76 CA GLY L 76 69.844 -7.056 228.024 1.00 0.46 ATOM 77 CA LEU L 77 72.788 -8.742 229.750 1.00 0.83 ATOM 78 CA ARG L 78 72.542 -12.446 230.616 1.00 1.10 ATOM 79 CA SER L 79 74.740 -14.966 232.483 1.00 1.27 ATOM 80 CA GLU L 80 75.811 -16.336 229.056 1.00 1.23 ATOM 81 CA ASP L 81 77.547 -13.035 228.145 1.00 1.08 ATOM 82 CA GLU L 82 80.180 -13.090 230.933 1.00 1.07 ATOM 83 CA ALA L 83 83.301 -13.414 228.750 1.00 0.62 ATOM 84 CA ASP L 84 86.266 -11.544 227.232 1.00 0.00 ATOM 85 CA TYR L 85 85.712 -9.287 224.219 1.00 0.00 ATOM 86 CA TYR L 86 88.331 -8.150 221.692 1.00 0.00 ATOM 87 CA CYS L 87 88.139 -5.531 218.924 1.00 0.00 ATOM 88 CA ALA L 88 90.185 -5.980 215.719 1.00 0.00 ATOM 89 CA ALA L 89 90.981 -4.008 212.550 1.00 0.00 ATOM 90 CA TRP L 90 93.290 -4.217 209.518 1.00 1.16 ATOM 91 CA ASP L 91 96.159 -1.748 209.889 1.00 1.79 ATOM 92 CA ASP L 92 98.184 -0.024 207.164 1.00 2.23 ATOM 93 CA SER L 93 101.006 0.880 209.595 1.00 2.63 ATOM 94 CA LEU L 94 104.393 -0.906 209.465 1.00 2.99 ATOM 95 CA ARG L 95 103.348 -2.713 212.691 1.00 2.97 ATOM 96 CA GLY L 96 100.260 -4.255 214.283 1.00 2.69 ATOM 97 CA GLN L 97 97.661 -6.590 212.724 1.00 2.67 ATOM 98 CA VAL L 98 95.697 -5.488 214.893 1.00 2.38 ATOM 99 CA PHE L 99 93.795 -6.809 217.957 1.00 1.99 ATOM 100 CA GLY L 100 92.756 -5.013 221.170 1.00 1.71 ATOM 101 CA GLY L 101 93.886 -5.811 224.733 1.00 1.50 ATOM 102 CA GLY L 102 90.459 -7.181 225.747 1.00 0.83 ATOM 103 CA THR L 103 87.593 -6.261 228.078 1.00 0.40 ATOM 104 CA LYS L 104 86.215 -8.469 230.867 1.00 0.00 ATOM 105 CA LEU L 105 82.416 -8.325 231.095 1.00 0.50 ATOM 106 CA THR L 106 80.802 -9.275 234.404 1.00 1.03 ATOM 107 CA VAL L 107 77.109 -10.078 234.980 1.00 1.50 ATOM 108 CA LEU L 108 77.618 -8.894 238.574 1.00 1.80 TER