HEADER VIRUS 31-DEC-69 6IDL TITLE Cryo-EM structure of Immature Dengue virus serotype 3 in complex with TITLE 2 human antibody 1H10 Fab at pH 5.0 (Class II particle) COMPND MOL_ID: 4; COMPND 2 MOLECULE: Fab 1H10 light chain (V-region); COMPND 3 CHAIN: J, N; COMPND 4 ENGINEERED: YES; EXPDTA ELECTRON MICROSCOPY DBREF 6IDL J -1 114 PDB 6IDL 6IDL -1 114 SEQRES 1 J 108 VAL LEU THR GLN PRO PRO SER ALA SER GLY THR PRO GLY SEQRES 2 J 108 GLN ARG VAL THR ILE SER CYS SER GLY GLY SER SER ASN SEQRES 3 J 108 ILE GLY SER SER TYR VAL TYR TRP TYR LYS GLN VAL PRO SEQRES 4 J 108 GLY THR ALA PRO LYS LEU LEU ILE TYR ARG ASN ASN GLU SEQRES 5 J 108 ARG PRO SER GLY VAL PRO ASP ARG PHE SER GLY SER LYS SEQRES 6 J 108 SER GLY THR SER ALA SER LEU ALA ILE SER GLY LEU ARG SEQRES 7 J 108 SER GLU ASP GLU ALA ASP TYR TYR CYS ALA ALA TRP ASP SEQRES 8 J 108 ASP SER LEU ARG GLY GLN VAL PHE GLY GLY GLY THR LYS SEQRES 9 J 108 LEU THR VAL LEU ATOM 1 CA VAL J 1 59.416 -15.372 271.897 1.00 1.65 ATOM 2 CA LEU J 2 56.011 -13.614 271.979 1.00 1.37 ATOM 3 CA THR J 3 55.342 -12.052 275.386 1.00 1.21 ATOM 4 CA GLN J 4 52.013 -12.679 277.103 1.00 1.19 ATOM 5 CA PRO J 5 50.743 -11.645 280.575 1.00 1.13 ATOM 6 CA PRO J 6 50.364 -14.653 282.962 1.00 1.18 ATOM 7 CA SER J 7 46.687 -14.035 283.891 1.00 1.33 ATOM 8 CA ALA J 8 43.856 -11.542 283.456 1.00 1.54 ATOM 9 CA SER J 9 40.654 -11.677 285.533 1.00 1.50 ATOM 10 CA GLY J 10 37.138 -10.336 284.866 1.00 1.52 ATOM 11 CA THR J 11 33.711 -10.617 286.474 1.00 1.59 ATOM 12 CA PRO J 12 30.853 -12.120 284.333 1.00 1.46 ATOM 13 CA GLY J 13 29.973 -9.525 281.665 1.00 1.28 ATOM 14 CA GLN J 14 33.234 -7.508 281.557 1.00 1.17 ATOM 15 CA ARG J 15 35.423 -7.054 278.480 1.00 0.87 ATOM 16 CA VAL J 16 38.927 -8.507 278.874 1.00 0.00 ATOM 17 CA THR J 17 41.972 -7.585 276.774 1.00 0.00 ATOM 18 CA ILE J 18 44.922 -9.963 276.335 1.00 0.00 ATOM 19 CA SER J 19 48.129 -8.262 275.148 1.00 0.00 ATOM 20 CA CYS J 20 50.840 -9.969 273.054 1.00 0.00 ATOM 21 CA SER J 21 54.152 -8.102 272.736 1.00 0.90 ATOM 22 CA GLY J 22 56.372 -9.105 269.795 1.00 1.54 ATOM 23 CA GLY J 23 59.292 -7.988 267.623 1.00 1.95 ATOM 24 CA SER J 24 59.358 -6.190 264.258 1.00 2.02 ATOM 25 CA SER J 25 60.397 -9.474 262.574 1.00 2.07 ATOM 26 CA ASN J 26 57.213 -11.372 263.582 1.00 2.13 ATOM 27 CA ILE J 27 54.230 -9.163 264.591 1.00 2.17 ATOM 28 CA GLY J 28 55.211 -5.831 262.979 1.00 2.22 ATOM 29 CA SER J 29 55.278 -7.424 259.471 1.00 2.22 ATOM 30 CA SER J 30 53.079 -10.576 259.506 1.00 1.99 ATOM 31 CA TYR J 31 49.612 -11.762 260.589 1.00 1.45 ATOM 32 CA VAL J 32 48.661 -12.588 264.195 1.00 0.67 ATOM 33 CA TYR J 33 46.700 -15.722 265.116 1.00 0.00 ATOM 34 CA TRP J 34 44.930 -16.489 268.416 1.00 0.00 ATOM 35 CA TYR J 35 43.998 -19.888 269.869 1.00 0.00 ATOM 36 CA LYS J 36 41.686 -20.963 272.707 1.00 1.01 ATOM 37 CA GLN J 37 42.562 -24.111 274.666 1.00 1.60 ATOM 38 CA VAL J 38 40.002 -25.525 277.099 1.00 2.08 ATOM 39 CA PRO J 39 41.726 -27.841 279.681 1.00 2.19 ATOM 40 CA GLY J 40 42.143 -31.320 278.146 1.00 2.23 ATOM 41 CA THR J 41 41.140 -30.273 274.597 1.00 2.14 ATOM 42 CA ALA J 42 43.336 -29.277 271.643 1.00 1.92 ATOM 43 CA PRO J 43 44.021 -25.538 270.923 1.00 1.46 ATOM 44 CA LYS J 44 41.155 -24.362 268.680 1.00 1.10 ATOM 45 CA LEU J 45 41.544 -21.374 266.335 1.00 0.88 ATOM 46 CA LEU J 46 39.885 -18.266 267.785 1.00 0.74 ATOM 47 CA ILE J 47 41.114 -15.403 265.544 1.00 1.07 ATOM 48 CA TYR J 48 43.074 -15.741 262.292 1.00 1.62 ATOM 49 CA ARG J 49 44.805 -13.382 259.820 1.00 2.12 ATOM 50 CA ASN J 50 44.555 -10.227 261.993 1.00 2.29 ATOM 51 CA ASN J 51 40.948 -9.941 263.269 1.00 2.44 ATOM 52 CA GLU J 52 39.227 -12.414 260.882 1.00 2.35 ATOM 53 CA ARG J 53 36.993 -14.891 262.714 1.00 2.08 ATOM 54 CA PRO J 54 36.317 -18.629 262.052 1.00 1.73 ATOM 55 CA SER J 55 32.781 -20.050 261.710 1.00 1.68 ATOM 56 CA GLY J 56 31.269 -20.761 265.150 1.00 1.52 ATOM 57 CA VAL J 57 33.327 -18.235 267.168 1.00 1.34 ATOM 58 CA PRO J 58 30.977 -15.636 268.779 1.00 1.18 ATOM 59 CA ASP J 59 31.106 -11.984 267.671 1.00 1.14 ATOM 60 CA ARG J 60 32.117 -11.014 271.251 1.00 0.83 ATOM 61 CA PHE J 61 35.699 -12.152 270.467 1.00 0.60 ATOM 62 CA SER J 62 37.710 -9.525 268.564 1.00 0.72 ATOM 63 CA GLY J 63 41.417 -9.403 267.674 1.00 0.81 ATOM 64 CA SER J 64 43.312 -6.149 267.042 1.00 0.90 ATOM 65 CA LYS J 65 46.878 -5.166 266.081 1.00 1.15 ATOM 66 CA SER J 66 48.849 -1.894 266.221 1.00 1.24 ATOM 67 CA GLY J 67 52.584 -1.841 265.413 1.00 1.17 ATOM 68 CA THR J 68 54.590 -4.703 266.972 1.00 1.00 ATOM 69 CA SER J 69 51.977 -5.513 269.659 1.00 0.67 ATOM 70 CA ALA J 70 48.620 -7.257 269.202 1.00 0.00 ATOM 71 CA SER J 71 45.640 -7.623 271.562 1.00 0.00 ATOM 72 CA LEU J 72 42.643 -9.959 271.897 1.00 0.00 ATOM 73 CA ALA J 73 39.415 -8.474 273.309 1.00 0.00 ATOM 74 CA ILE J 74 36.768 -10.727 274.892 1.00 0.00 ATOM 75 CA SER J 75 33.535 -8.821 275.647 1.00 0.00 ATOM 76 CA GLY J 76 30.718 -10.246 277.797 1.00 0.46 ATOM 77 CA LEU J 77 32.634 -12.956 279.661 1.00 0.83 ATOM 78 CA ARG J 78 30.927 -16.303 280.315 1.00 1.10 ATOM 79 CA SER J 79 31.827 -19.501 282.218 1.00 1.27 ATOM 80 CA GLU J 80 32.610 -21.117 278.820 1.00 1.23 ATOM 81 CA ASP J 81 35.540 -18.712 278.214 1.00 1.08 ATOM 82 CA GLU J 82 37.689 -19.815 281.194 1.00 1.07 ATOM 83 CA ALA J 83 40.642 -21.267 279.248 1.00 0.62 ATOM 84 CA ASP J 84 44.219 -20.643 278.063 1.00 0.00 ATOM 85 CA TYR J 85 44.839 -18.294 275.135 1.00 0.00 ATOM 86 CA TYR J 86 47.914 -18.197 272.882 1.00 0.00 ATOM 87 CA CYS J 87 48.981 -15.654 270.243 1.00 0.00 ATOM 88 CA ALA J 88 50.989 -16.793 267.189 1.00 0.00 ATOM 89 CA ALA J 89 52.759 -15.220 264.198 1.00 0.00 ATOM 90 CA TRP J 90 55.084 -16.241 261.348 1.00 1.16 ATOM 91 CA ASP J 91 58.626 -15.060 262.067 1.00 1.79 ATOM 92 CA ASP J 92 61.393 -14.190 259.602 1.00 2.23 ATOM 93 CA SER J 93 64.113 -14.474 262.286 1.00 2.63 ATOM 94 CA LEU J 94 66.569 -17.414 262.330 1.00 2.99 ATOM 95 CA ARG J 95 64.627 -18.742 265.370 1.00 2.97 ATOM 96 CA GLY J 96 61.054 -19.017 266.635 1.00 2.69 ATOM 97 CA GLN J 97 57.919 -20.157 264.760 1.00 2.67 ATOM 98 CA VAL J 98 56.329 -18.427 266.823 1.00 2.38 ATOM 99 CA PHE J 99 53.795 -18.976 269.658 1.00 1.99 ATOM 100 CA GLY J 100 53.224 -16.975 272.868 1.00 1.71 ATOM 101 CA GLY J 101 53.636 -18.206 276.463 1.00 1.50 ATOM 102 CA GLY J 102 49.868 -18.183 277.134 1.00 0.83 ATOM 103 CA THR J 103 47.363 -16.281 279.280 1.00 0.40 ATOM 104 CA LYS J 104 45.003 -17.844 281.834 1.00 0.00 ATOM 105 CA LEU J 105 41.538 -16.267 281.774 1.00 0.50 ATOM 106 CA THR J 106 39.388 -16.586 284.893 1.00 1.03 ATOM 107 CA VAL J 107 35.629 -15.931 285.137 1.00 1.50 ATOM 108 CA LEU J 108 36.217 -15.094 288.814 1.00 1.80 TER