HEADER VIRUS 31-DEC-69 6IDL TITLE Cryo-EM structure of Immature Dengue virus serotype 3 in complex with TITLE 2 human antibody 1H10 Fab at pH 5.0 (Class II particle) COMPND MOL_ID: 3; COMPND 2 MOLECULE: Fab 1H10 heavy chain (V-region); COMPND 3 CHAIN: I, M; COMPND 4 ENGINEERED: YES; EXPDTA ELECTRON MICROSCOPY DBREF 6IDL M 1 104 PDB 6IDL 6IDL 1 104 SEQRES 1 M 97 MET HIS TRP VAL ARG GLN ALA PRO GLY LYS GLY LEU GLU SEQRES 2 M 97 TRP VAL SER LEU ILE SER TYR ASP GLY SER ASN LYS TYR SEQRES 3 M 97 ASN ALA ASP SER VAL ARG GLY ARG PHE SER ILE SER ARG SEQRES 4 M 97 ASP ASN SER LYS ASN THR LEU TYR LEU GLN MET ASN SER SEQRES 5 M 97 LEU ARG LEU GLU ASP THR ALA VAL TYR TYR CYS VAL ARG SEQRES 6 M 97 VAL ARG GLN PRO TRP THR GLN ALA TRP SER THR ASN TYR SEQRES 7 M 97 PHE TYR TYR TYR GLY MET ASP VAL TRP GLY GLN GLY THR SEQRES 8 M 97 THR VAL THR VAL SER SER ATOM 1 CA MET M 1 81.661 -61.075 221.997 1.00 0.99 ATOM 2 CA HIS M 2 84.054 -59.473 224.472 1.00 0.66 ATOM 3 CA TRP M 3 85.971 -60.454 227.600 1.00 0.00 ATOM 4 CA VAL M 4 86.565 -57.732 230.225 1.00 0.00 ATOM 5 CA ARG M 5 88.372 -57.900 233.524 1.00 0.00 ATOM 6 CA GLN M 6 88.126 -56.028 236.785 1.00 0.90 ATOM 7 CA ALA M 7 91.067 -56.542 239.113 1.00 1.49 ATOM 8 CA PRO M 8 89.672 -56.267 242.687 1.00 2.03 ATOM 9 CA GLY M 9 90.016 -52.583 243.612 1.00 2.44 ATOM 10 CA LYS M 10 90.650 -51.506 239.977 1.00 2.82 ATOM 11 CA GLY M 11 88.379 -50.281 237.147 1.00 2.71 ATOM 12 CA LEU M 12 87.183 -51.920 233.910 1.00 2.35 ATOM 13 CA GLU M 13 89.756 -53.228 231.441 1.00 1.89 ATOM 14 CA TRP M 14 88.680 -54.617 228.052 1.00 1.52 ATOM 15 CA VAL M 15 90.480 -57.854 227.127 1.00 0.92 ATOM 16 CA SER M 16 89.582 -59.380 223.798 1.00 0.93 ATOM 17 CA LEU M 17 87.027 -59.213 221.125 1.00 1.25 ATOM 18 CA ILE M 18 85.814 -61.436 218.256 1.00 1.57 ATOM 19 CA SER M 19 83.044 -61.248 215.660 1.00 1.92 ATOM 20 CA TYR M 20 80.147 -63.608 214.862 1.00 2.43 ATOM 21 CA ASP M 21 82.084 -64.892 211.811 1.00 2.69 ATOM 22 CA GLY M 22 84.688 -65.669 214.538 1.00 2.78 ATOM 23 CA SER M 23 87.113 -63.263 212.928 1.00 2.95 ATOM 24 CA ASN M 24 89.218 -60.238 213.921 1.00 2.93 ATOM 25 CA LYS M 25 90.347 -61.126 217.325 1.00 2.86 ATOM 26 CA TYR M 26 91.577 -58.106 219.263 1.00 2.65 ATOM 27 CA ASN M 27 93.555 -58.284 222.488 1.00 2.55 ATOM 28 CA ALA M 28 94.853 -55.872 225.129 1.00 2.43 ATOM 29 CA ASP M 29 98.651 -55.332 225.121 1.00 2.39 ATOM 30 CA SER M 30 98.526 -56.528 228.746 1.00 2.25 ATOM 31 CA VAL M 31 97.059 -59.815 227.415 1.00 2.18 ATOM 32 CA ARG M 32 98.351 -60.445 223.854 1.00 2.17 ATOM 33 CA GLY M 33 100.387 -63.613 223.257 1.00 2.01 ATOM 34 CA ARG M 34 98.932 -65.175 226.411 1.00 1.84 ATOM 35 CA PHE M 35 95.132 -65.396 225.882 1.00 1.84 ATOM 36 CA SER M 36 93.216 -67.112 223.073 1.00 1.93 ATOM 37 CA ILE M 37 89.637 -66.089 222.185 1.00 1.91 ATOM 38 CA SER M 38 87.702 -69.005 220.676 1.00 2.08 ATOM 39 CA ARG M 39 84.017 -69.332 219.640 1.00 2.26 ATOM 40 CA ASP M 40 81.356 -71.923 218.811 1.00 2.38 ATOM 41 CA ASN M 41 78.301 -70.151 217.269 1.00 2.57 ATOM 42 CA SER M 42 76.655 -73.602 216.974 1.00 2.74 ATOM 43 CA LYS M 43 77.342 -74.284 220.691 1.00 2.76 ATOM 44 CA ASN M 44 76.729 -70.627 221.803 1.00 2.70 ATOM 45 CA THR M 45 79.991 -70.499 223.818 1.00 2.56 ATOM 46 CA LEU M 46 83.034 -68.215 223.983 1.00 2.26 ATOM 47 CA TYR M 47 86.275 -69.685 225.474 1.00 2.10 ATOM 48 CA LEU M 48 89.145 -67.421 226.572 1.00 2.03 ATOM 49 CA GLN M 49 92.239 -69.669 226.814 1.00 2.04 ATOM 50 CA MET M 50 94.629 -68.300 229.461 1.00 2.14 ATOM 51 CA ASN M 51 98.383 -68.976 229.479 1.00 2.41 ATOM 52 CA SER M 52 100.840 -68.170 231.104 1.00 2.53 ATOM 53 CA LEU M 53 99.212 -66.487 234.067 1.00 2.47 ATOM 54 CA ARG M 54 100.954 -63.756 236.074 1.00 2.37 ATOM 55 CA LEU M 55 99.819 -61.930 239.234 1.00 2.21 ATOM 56 CA GLU M 56 98.344 -58.794 237.594 1.00 1.73 ATOM 57 CA ASP M 57 96.108 -61.254 235.680 1.00 1.20 ATOM 58 CA THR M 58 94.049 -61.646 238.870 1.00 0.72 ATOM 59 CA ALA M 59 90.550 -60.236 238.296 1.00 0.00 ATOM 60 CA VAL M 60 86.952 -61.014 237.318 1.00 0.00 ATOM 61 CA TYR M 61 86.044 -61.927 233.728 1.00 0.00 ATOM 62 CA TYR M 62 82.771 -60.977 232.050 1.00 0.00 ATOM 63 CA CYS M 63 81.801 -62.117 228.566 1.00 1.03 ATOM 64 CA VAL M 64 79.544 -59.556 226.929 1.00 1.62 ATOM 65 CA ARG M 65 77.234 -58.980 223.966 1.00 2.21 ATOM 66 CA VAL M 66 78.479 -56.394 221.529 1.00 2.70 ATOM 67 CA ARG M 67 77.340 -54.710 218.285 1.00 3.13 ATOM 68 CA GLN M 68 79.788 -54.416 215.385 1.00 3.48 ATOM 69 CA PRO M 69 81.050 -51.077 216.681 1.00 3.96 ATOM 70 CA TRP M 70 84.692 -51.937 217.383 1.00 4.57 ATOM 71 CA THR M 71 87.998 -50.252 216.549 1.00 5.24 ATOM 72 CA GLN M 72 89.895 -48.227 215.896 1.00 5.64 ATOM 73 CA ALA M 73 93.585 -47.305 215.870 1.00 5.70 ATOM 74 CA TRP M 74 96.937 -48.383 214.432 1.00 5.35 ATOM 75 CA SER M 75 97.160 -51.803 216.082 1.00 4.71 ATOM 76 CA THR M 76 93.964 -53.180 214.549 1.00 4.27 ATOM 77 CA ASN M 77 92.227 -52.019 216.489 1.00 3.96 ATOM 78 CA TYR M 78 89.781 -52.119 219.402 1.00 3.78 ATOM 79 CA PHE M 79 88.702 -49.608 222.047 1.00 3.65 ATOM 80 CA TYR M 80 85.667 -50.307 224.230 1.00 3.41 ATOM 81 CA TYR M 81 82.665 -50.341 221.892 1.00 3.07 ATOM 82 CA TYR M 82 79.697 -48.139 222.798 1.00 2.80 ATOM 83 CA GLY M 83 76.652 -50.332 223.380 1.00 2.49 ATOM 84 CA MET M 84 77.773 -53.727 224.671 1.00 2.22 ATOM 85 CA ASP M 85 74.459 -54.348 226.400 1.00 2.16 ATOM 86 CA VAL M 86 74.544 -57.890 227.887 1.00 2.06 ATOM 87 CA TRP M 87 77.010 -59.248 230.451 1.00 1.88 ATOM 88 CA GLY M 88 77.470 -62.514 232.368 1.00 1.72 ATOM 89 CA GLN M 89 77.854 -62.364 236.172 1.00 1.49 ATOM 90 CA GLY M 90 81.607 -62.892 235.675 1.00 1.17 ATOM 91 CA THR M 91 84.122 -65.504 236.821 1.00 1.02 ATOM 92 CA THR M 92 86.999 -64.853 239.213 1.00 1.17 ATOM 93 CA VAL M 93 90.594 -65.801 238.393 1.00 1.40 ATOM 94 CA THR M 94 93.050 -65.718 241.274 1.00 1.89 ATOM 95 CA VAL M 95 96.749 -65.933 240.424 1.00 2.36 ATOM 96 CA SER M 96 99.088 -66.585 243.372 1.00 2.84 ATOM 97 CA SER M 97 100.503 -69.060 245.908 1.00 3.12 TER 98 CA ASN B 388 -42.909 6.241 219.447 1.00 0.00 ATOM 99 CA TRP B 389 -39.045 6.563 219.002 1.00 0.00 ATOM 100 CA TYR B 390 -36.679 8.748 216.973 1.00 0.00 ATOM 101 CA LYS B 391 -33.460 7.672 215.494 1.00 0.00 ATOM 102 CA LYS B 392 -30.895 10.528 214.835 1.00 0.00 TER