HEADER hydrolase/rna 31-DEC-69 6MDZ TITLE Human Argonaute2-miR-122 bound to a target RNA with two central TITLE 2 mismatches (bu2) COMPND MOL_ID: 1; COMPND 2 MOLECULE: Protein argonaute-2; COMPND 3 CHAIN: A, B; COMPND 4 MUTATION: YES; COMPND 5 EC: 3.1.26.-; COMPND 6 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 3.40 ANGSTORMS DBREF 6MDZ A 1 859 UNP Q9UKV8 AGO2_HUMAN 1 859 SEQRES 1 A 170 THR GLY ARG VAL LEU GLN PRO PRO SER ILE LEU TYR GLY SEQRES 2 A 170 GLY ARG ASN LYS ALA ILE ALA THR PRO VAL GLN GLY VAL SEQRES 3 A 170 TRP ASP MET ARG ASN LYS GLN PHE HIS THR GLY ILE GLU SEQRES 4 A 170 ILE LYS VAL TRP ALA ILE ALA CYS PHE ALA PRO GLN ARG SEQRES 5 A 170 GLN CYS THR GLU VAL HIS LEU LYS SER PHE THR GLU GLN SEQRES 6 A 170 LEU ARG LYS ILE SER ARG ASP ALA GLY MET PRO ILE GLN SEQRES 7 A 170 GLY GLN PRO CYS PHE CYS LYS TYR ALA GLN GLY ALA ASP SEQRES 8 A 170 SER VAL GLU PRO MET PHE ARG HIS LEU LYS ASN THR TYR SEQRES 9 A 170 ALA GLY LEU GLN LEU VAL VAL VAL ILE LEU PRO GLY LYS SEQRES 10 A 170 THR PRO VAL TYR ALA GLU VAL LYS ARG VAL GLY ASP THR SEQRES 11 A 170 VAL LEU GLY MET ALA THR GLN CYS VAL GLN MET LYS ASN SEQRES 12 A 170 VAL GLN ARG THR THR PRO GLN THR LEU SER ASN LEU CYS SEQRES 13 A 170 LEU LYS ILE ASN VAL LYS LEU GLY GLY VAL ASN ASN ILE SEQRES 14 A 170 LEU SEQRES 1 A 22 ASP HIS GLN ALA LEU ALA LYS ALA VAL GLN VAL HIS GLN SEQRES 2 A 22 ASP THR LEU ARG THR MET TYR PHE ALA ATOM 1 N ASP A 838 123.927 -40.212 2.064 1.00118.01 ATOM 2 CA ASP A 838 125.352 -40.005 1.836 1.00111.40 ATOM 3 C ASP A 838 126.070 -39.698 3.147 1.00111.46 ATOM 4 O ASP A 838 127.294 -39.799 3.234 1.00117.48 ATOM 5 CB ASP A 838 125.573 -38.873 0.829 1.00108.90 ATOM 6 CG ASP A 838 127.023 -38.743 0.403 1.00103.19 ATOM 7 OD1 ASP A 838 127.735 -39.769 0.388 1.00100.77 ATOM 8 OD2 ASP A 838 127.452 -37.615 0.081 1.00104.20 ATOM 9 N HIS A 839 125.299 -39.330 4.166 1.00117.86 ATOM 10 CA HIS A 839 125.859 -38.972 5.465 1.00124.61 ATOM 11 C HIS A 839 126.439 -40.181 6.191 1.00124.81 ATOM 12 O HIS A 839 127.534 -40.113 6.749 1.00119.50 ATOM 13 CB HIS A 839 124.796 -38.306 6.340 1.00124.63 ATOM 14 CG HIS A 839 125.278 -37.960 7.714 1.00122.38 ATOM 15 ND1 HIS A 839 125.151 -38.817 8.786 1.00124.77 ATOM 16 CD2 HIS A 839 125.890 -36.850 8.191 1.00111.36 ATOM 17 CE1 HIS A 839 125.662 -38.250 9.864 1.00118.28 ATOM 18 NE2 HIS A 839 126.117 -37.056 9.530 1.00114.07 ATOM 19 N GLN A 840 125.701 -41.287 6.186 1.00112.56 ATOM 20 CA GLN A 840 126.157 -42.507 6.840 1.00107.55 ATOM 21 C GLN A 840 127.332 -43.120 6.087 1.00106.02 ATOM 22 O GLN A 840 128.079 -43.931 6.634 1.00 97.95 ATOM 23 CB GLN A 840 125.014 -43.517 6.955 1.00119.50 ATOM 24 CG GLN A 840 123.880 -43.067 7.863 1.00120.05 ATOM 25 CD GLN A 840 122.797 -44.118 8.011 1.00106.30 ATOM 26 OE1 GLN A 840 122.815 -45.144 7.333 1.00 98.40 ATOM 27 NE2 GLN A 840 121.846 -43.865 8.903 1.00102.93 ATOM 28 N ALA A 841 127.488 -42.727 4.827 1.00114.93 ATOM 29 CA ALA A 841 128.604 -43.189 4.013 1.00121.29 ATOM 30 C ALA A 841 129.898 -42.500 4.434 1.00114.15 ATOM 31 O ALA A 841 130.920 -43.154 4.647 1.00105.42 ATOM 32 CB ALA A 841 128.325 -42.945 2.539 1.00125.36 ATOM 33 N LEU A 842 129.848 -41.177 4.560 1.00123.86 ATOM 34 CA LEU A 842 131.017 -40.403 4.965 1.00114.42 ATOM 35 C LEU A 842 131.284 -40.552 6.460 1.00100.65 ATOM 36 O LEU A 842 132.342 -40.162 6.953 1.00 91.74 ATOM 37 CB LEU A 842 130.838 -38.925 4.596 1.00109.68 ATOM 38 CG LEU A 842 129.571 -38.190 5.051 1.00108.58 ATOM 39 CD1 LEU A 842 129.718 -37.622 6.457 1.00113.61 ATOM 40 CD2 LEU A 842 129.208 -37.091 4.063 1.00111.56 ATOM 41 N ALA A 843 130.315 -41.114 7.176 1.00102.83 ATOM 42 CA ALA A 843 130.448 -41.344 8.609 1.00 87.79 ATOM 43 C ALA A 843 131.547 -42.360 8.895 1.00 83.87 ATOM 44 O ALA A 843 132.165 -42.338 9.959 1.00 79.12 ATOM 45 CB ALA A 843 129.126 -41.814 9.194 1.00 96.22 ATOM 46 N LYS A 844 131.784 -43.250 7.937 1.00 94.92 ATOM 47 CA LYS A 844 132.797 -44.287 8.088 1.00 91.70 ATOM 48 C LYS A 844 134.137 -43.840 7.515 1.00 78.81 ATOM 49 O LYS A 844 135.133 -44.557 7.613 1.00 77.89 ATOM 50 CB LYS A 844 132.339 -45.580 7.411 1.00 94.37 ATOM 51 CG LYS A 844 131.007 -46.106 7.920 1.00 98.23 ATOM 52 CD LYS A 844 130.629 -47.410 7.235 1.00111.40 ATOM 53 CE LYS A 844 129.304 -47.943 7.754 1.00104.78 ATOM 54 NZ LYS A 844 128.945 -49.244 7.126 1.00 89.52 ATOM 55 N ALA A 845 134.156 -42.654 6.916 1.00 79.01 ATOM 56 CA ALA A 845 135.375 -42.119 6.321 1.00 80.53 ATOM 57 C ALA A 845 136.314 -41.572 7.391 1.00 74.62 ATOM 58 O ALA A 845 137.530 -41.538 7.204 1.00 68.57 ATOM 59 CB ALA A 845 135.042 -41.039 5.305 1.00 78.10 ATOM 60 N VAL A 846 135.741 -41.147 8.512 1.00 75.57 ATOM 61 CA VAL A 846 136.525 -40.592 9.609 1.00 69.57 ATOM 62 C VAL A 846 137.012 -41.687 10.553 1.00 78.39 ATOM 63 O VAL A 846 137.886 -41.455 11.388 1.00 73.01 ATOM 64 CB VAL A 846 135.718 -39.556 10.412 1.00 63.26 ATOM 65 CG1 VAL A 846 135.319 -38.392 9.521 1.00 57.90 ATOM 66 CG2 VAL A 846 134.491 -40.205 11.034 1.00 63.59 ATOM 67 N GLN A 847 136.442 -42.880 10.417 1.00 90.20 ATOM 68 CA GLN A 847 136.844 -44.016 11.237 1.00 89.01 ATOM 69 C GLN A 847 138.272 -44.439 10.909 1.00 86.49 ATOM 70 O GLN A 847 138.516 -45.095 9.896 1.00 89.94 ATOM 71 CB GLN A 847 135.884 -45.191 11.038 1.00 97.72 ATOM 72 CG GLN A 847 136.238 -46.429 11.848 1.00107.10 ATOM 73 CD GLN A 847 136.111 -46.208 13.342 1.00119.41 ATOM 74 OE1 GLN A 847 135.357 -45.345 13.793 1.00120.55 ATOM 75 NE2 GLN A 847 136.851 -46.989 14.121 1.00125.16 ATOM 76 N VAL A 848 139.211 -44.056 11.768 1.00 81.73 ATOM 77 CA VAL A 848 140.621 -44.365 11.552 1.00 81.62 ATOM 78 C VAL A 848 140.900 -45.861 11.679 1.00 82.98 ATOM 79 O VAL A 848 140.026 -46.636 12.068 1.00 91.92 ATOM 80 CB VAL A 848 141.521 -43.597 12.539 1.00 78.59 ATOM 81 CG1 VAL A 848 141.551 -42.119 12.188 1.00 84.60 ATOM 82 CG2 VAL A 848 141.040 -43.802 13.963 1.00 77.38 ATOM 83 N HIS A 849 142.126 -46.256 11.351 1.00 76.61 ATOM 84 CA HIS A 849 142.501 -47.665 11.310 1.00 80.56 ATOM 85 C HIS A 849 142.552 -48.293 12.700 1.00 85.01 ATOM 86 O HIS A 849 142.634 -47.591 13.708 1.00 83.30 ATOM 87 CB HIS A 849 143.855 -47.828 10.614 1.00 80.75 ATOM 88 CG HIS A 849 144.159 -49.234 10.198 1.00 84.69 ATOM 89 ND1 HIS A 849 144.863 -50.111 10.994 1.00 82.57 ATOM 90 CD2 HIS A 849 143.857 -49.912 9.067 1.00 79.87 ATOM 91 CE1 HIS A 849 144.979 -51.271 10.372 1.00 82.26 ATOM 92 NE2 HIS A 849 144.378 -51.176 9.200 1.00 79.92 ATOM 93 N GLN A 850 142.498 -49.621 12.736 1.00 83.56 ATOM 94 CA GLN A 850 142.574 -50.380 13.980 1.00 88.07 ATOM 95 C GLN A 850 143.881 -50.117 14.723 1.00 83.86 ATOM 96 O GLN A 850 143.890 -49.946 15.942 1.00 80.02 ATOM 97 CB GLN A 850 142.427 -51.878 13.692 1.00 94.10 ATOM 98 CG GLN A 850 142.611 -52.778 14.905 1.00 97.53 ATOM 99 CD GLN A 850 141.424 -52.747 15.848 1.00 90.78 ATOM 100 OE1 GLN A 850 141.547 -53.070 17.030 1.00 99.68 ATOM 101 NE2 GLN A 850 140.263 -52.365 15.328 1.00 77.51 ATOM 102 N ASP A 851 144.984 -50.087 13.982 1.00 86.76 ATOM 103 CA ASP A 851 146.301 -49.880 14.574 1.00 92.95 ATOM 104 C ASP A 851 146.581 -48.398 14.797 1.00 86.27 ATOM 105 O ASP A 851 147.366 -48.028 15.669 1.00 87.48 ATOM 106 CB ASP A 851 147.386 -50.493 13.688 1.00 96.88 ATOM 107 CG ASP A 851 147.118 -51.949 13.364 1.00110.35 ATOM 108 OD1 ASP A 851 145.931 -52.331 13.277 1.00110.70 ATOM 109 OD2 ASP A 851 148.092 -52.713 13.197 1.00108.33 ATOM 110 N THR A 852 145.933 -47.555 14.000 1.00 80.81 ATOM 111 CA THR A 852 146.089 -46.110 14.115 1.00 75.12 ATOM 112 C THR A 852 145.422 -45.591 15.387 1.00 69.21 ATOM 113 O THR A 852 145.911 -44.652 16.019 1.00 61.77 ATOM 114 CB THR A 852 145.498 -45.389 12.887 1.00 79.04 ATOM 115 OG1 THR A 852 146.166 -45.838 11.703 1.00 77.50 ATOM 116 CG2 THR A 852 145.669 -43.888 13.004 1.00 70.62 ATOM 117 N LEU A 853 144.310 -46.220 15.758 1.00 77.05 ATOM 118 CA LEU A 853 143.565 -45.860 16.963 1.00 70.15 ATOM 119 C LEU A 853 144.432 -45.879 18.217 1.00 57.42 ATOM 120 O LEU A 853 144.302 -45.016 19.085 1.00 55.39 ATOM 121 CB LEU A 853 142.375 -46.805 17.153 1.00 70.48 ATOM 122 CG LEU A 853 141.030 -46.369 16.574 1.00 70.04 ATOM 123 CD1 LEU A 853 140.027 -47.509 16.636 1.00 80.59 ATOM 124 CD2 LEU A 853 140.506 -45.155 17.323 1.00 60.10 ATOM 125 N ARG A 854 145.322 -46.862 18.301 1.00 66.35 ATOM 126 CA ARG A 854 146.169 -47.027 19.476 1.00 69.33 ATOM 127 C ARG A 854 147.400 -46.127 19.417 1.00 61.90 ATOM 128 O ARG A 854 148.380 -46.357 20.125 1.00 55.26 ATOM 129 CB ARG A 854 146.603 -48.489 19.622 1.00 79.35 ATOM 130 CG ARG A 854 145.507 -49.513 19.358 1.00 87.55 ATOM 131 CD ARG A 854 144.283 -49.282 20.231 1.00 81.36 ATOM 132 NE ARG A 854 143.350 -50.405 20.165 1.00 84.38 ATOM 133 CZ ARG A 854 142.540 -50.648 19.140 1.00 74.87 ATOM 134 NH1 ARG A 854 142.547 -49.850 18.081 1.00 74.67 ATOM 135 NH2 ARG A 854 141.726 -51.694 19.170 1.00 71.39 ATOM 136 N THR A 855 147.350 -45.109 18.563 1.00 60.50 ATOM 137 CA THR A 855 148.459 -44.172 18.415 1.00 59.99 ATOM 138 C THR A 855 147.967 -42.730 18.373 1.00 57.24 ATOM 139 O THR A 855 146.767 -42.473 18.272 1.00 55.53 ATOM 140 CB THR A 855 149.275 -44.449 17.135 1.00 67.84 ATOM 141 OG1 THR A 855 148.405 -44.425 15.995 1.00 70.38 ATOM 142 CG2 THR A 855 149.965 -45.803 17.213 1.00 77.37 ATOM 143 N MET A 856 148.905 -41.791 18.451 1.00 56.51 ATOM 144 CA MET A 856 148.585 -40.375 18.332 1.00 40.29 ATOM 145 C MET A 856 148.964 -39.865 16.946 1.00 35.31 ATOM 146 O MET A 856 149.899 -39.080 16.790 1.00 32.25 ATOM 147 CB MET A 856 149.298 -39.565 19.417 1.00 32.19 ATOM 148 CG MET A 856 148.826 -39.879 20.827 1.00 36.44 ATOM 149 SD MET A 856 149.704 -38.939 22.092 1.00 44.90 ATOM 150 CE MET A 856 149.333 -37.260 21.591 1.00 32.29 ATOM 151 N TYR A 857 148.224 -40.331 15.946 1.00 32.60 ATOM 152 CA TYR A 857 148.446 -39.963 14.552 1.00 33.63 ATOM 153 C TYR A 857 148.246 -38.470 14.312 1.00 37.28 ATOM 154 O TYR A 857 148.867 -37.882 13.426 1.00 43.36 ATOM 155 CB TYR A 857 147.503 -40.757 13.647 1.00 38.78 ATOM 156 CG TYR A 857 146.037 -40.463 13.892 1.00 34.84 ATOM 157 CD1 TYR A 857 145.356 -41.053 14.951 1.00 33.06 ATOM 158 CD2 TYR A 857 145.337 -39.593 13.066 1.00 40.20 ATOM 159 CE1 TYR A 857 144.019 -40.785 15.178 1.00 38.07 ATOM 160 CE2 TYR A 857 143.999 -39.320 13.286 1.00 40.30 ATOM 161 CZ TYR A 857 143.346 -39.919 14.342 1.00 34.38 ATOM 162 OH TYR A 857 142.015 -39.649 14.565 1.00 35.43 ATOM 163 N PHE A 858 147.368 -37.870 15.108 1.00 36.30 ATOM 164 CA PHE A 858 146.998 -36.469 14.947 1.00 32.48 ATOM 165 C PHE A 858 148.144 -35.523 15.289 1.00 30.55 ATOM 166 O PHE A 858 148.143 -34.360 14.882 1.00 30.65 ATOM 167 CB PHE A 858 145.778 -36.148 15.813 1.00 25.82 ATOM 168 CG PHE A 858 145.885 -36.654 17.223 1.00 22.12 ATOM 169 CD1 PHE A 858 146.478 -35.882 18.206 1.00 25.79 ATOM 170 CD2 PHE A 858 145.391 -37.903 17.565 1.00 29.57 ATOM 171 CE1 PHE A 858 146.577 -36.346 19.504 1.00 34.33 ATOM 172 CE2 PHE A 858 145.488 -38.372 18.862 1.00 40.06 ATOM 173 CZ PHE A 858 146.082 -37.592 19.832 1.00 38.36 ATOM 174 N ALA A 859 149.120 -36.025 16.039 1.00 25.48 ATOM 175 CA ALA A 859 150.279 -35.227 16.422 1.00 31.38 ATOM 176 C ALA A 859 151.081 -34.802 15.196 1.00 40.55 ATOM 177 O ALA A 859 150.977 -35.406 14.129 1.00 42.47 ATOM 178 CB ALA A 859 151.159 -36.001 17.391 1.00 27.81 ATOM 179 OXT ALA A 859 151.850 -33.843 15.241 1.00 38.76 TER