HEADER RIBOSOME 31-DEC-69 6MTC TITLE Rabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state) COMPND MOL_ID: 43; COMPND 2 MOLECULE: 60S ribosomal protein L41; COMPND 3 CHAIN: n; EXPDTA ELECTRON MICROSCOPY DBREF 6MTC n 1 25 PDB 6MTC 6MTC 1 25 SEQRES 1 n 25 MET ARG ALA LYS TRP ARG LYS LYS ARG MET ARG ARG LEU SEQRES 2 n 25 LYS ARG LYS ARG ARG LYS MET ARG GLN ARG SER LYS ATOM 1 N MET n 1 223.153 300.629 269.689 1.00 33.27 ATOM 2 CA MET n 1 224.480 300.924 270.208 1.00 33.27 ATOM 3 C MET n 1 224.372 301.881 271.369 1.00 33.27 ATOM 4 O MET n 1 224.451 303.093 271.177 1.00 33.27 ATOM 5 CB MET n 1 225.365 301.520 269.123 1.00 33.27 ATOM 6 CG MET n 1 226.829 301.527 269.470 1.00 33.27 ATOM 7 SD MET n 1 227.473 299.859 269.525 1.00 33.27 ATOM 8 CE MET n 1 228.805 300.047 270.698 1.00 33.27 ATOM 9 N ARG n 2 224.158 301.309 272.554 1.00 29.84 ATOM 10 CA ARG n 2 224.083 302.054 273.804 1.00 29.84 ATOM 11 C ARG n 2 225.362 302.854 274.033 1.00 29.84 ATOM 12 O ARG n 2 226.453 302.434 273.638 1.00 29.84 ATOM 13 CB ARG n 2 223.844 301.066 274.949 1.00 29.84 ATOM 14 CG ARG n 2 223.787 301.643 276.337 1.00 29.84 ATOM 15 CD ARG n 2 223.879 300.619 277.457 1.00 29.84 ATOM 16 NE ARG n 2 222.661 299.908 277.814 1.00 29.84 ATOM 17 CZ ARG n 2 222.613 299.072 278.843 1.00 29.84 ATOM 18 NH1 ARG n 2 221.490 298.453 279.140 1.00 29.84 ATOM 19 NH2 ARG n 2 223.678 298.903 279.609 1.00 29.84 ATOM 20 N ALA n 3 225.213 304.041 274.630 1.00 31.92 ATOM 21 CA ALA n 3 226.355 304.908 274.904 1.00 31.92 ATOM 22 C ALA n 3 227.358 304.253 275.838 1.00 31.92 ATOM 23 O ALA n 3 228.567 304.465 275.699 1.00 31.92 ATOM 24 CB ALA n 3 225.873 306.226 275.503 1.00 31.92 ATOM 25 N LYS n 4 226.881 303.429 276.761 1.00 30.39 ATOM 26 CA LYS n 4 227.774 302.723 277.666 1.00 30.39 ATOM 27 C LYS n 4 228.609 301.688 276.930 1.00 30.39 ATOM 28 O LYS n 4 229.790 301.502 277.237 1.00 30.39 ATOM 29 CB LYS n 4 226.948 302.075 278.757 1.00 30.39 ATOM 30 CG LYS n 4 227.680 301.399 279.839 1.00 30.39 ATOM 31 CD LYS n 4 226.640 300.918 280.811 1.00 30.39 ATOM 32 CE LYS n 4 227.274 300.199 281.928 1.00 30.39 ATOM 33 NZ LYS n 4 226.278 299.728 282.912 1.00 30.39 ATOM 34 N TRP n 5 228.038 301.033 275.923 1.00 29.12 ATOM 35 CA TRP n 5 228.852 300.068 275.206 1.00 29.12 ATOM 36 C TRP n 5 229.713 300.714 274.129 1.00 29.12 ATOM 37 O TRP n 5 230.755 300.144 273.790 1.00 29.12 ATOM 38 CB TRP n 5 227.990 298.944 274.614 1.00 29.12 ATOM 39 CG TRP n 5 227.025 298.300 275.584 1.00 29.12 ATOM 40 CD1 TRP n 5 225.674 298.236 275.453 1.00 29.12 ATOM 41 CD2 TRP n 5 227.319 297.716 276.858 1.00 29.12 ATOM 42 NE1 TRP n 5 225.120 297.604 276.524 1.00 29.12 ATOM 43 CE2 TRP n 5 226.107 297.288 277.410 1.00 29.12 ATOM 44 CE3 TRP n 5 228.491 297.502 277.581 1.00 29.12 ATOM 45 CZ2 TRP n 5 226.032 296.657 278.633 1.00 29.12 ATOM 46 CZ3 TRP n 5 228.412 296.885 278.793 1.00 29.12 ATOM 47 CH2 TRP n 5 227.188 296.482 279.321 1.00 29.12 ATOM 48 N ARG n 6 229.345 301.901 273.620 1.00 32.59 ATOM 49 CA ARG n 6 230.333 302.685 272.878 1.00 32.59 ATOM 50 C ARG n 6 231.511 303.055 273.757 1.00 32.59 ATOM 51 O ARG n 6 232.659 302.990 273.309 1.00 32.59 ATOM 52 CB ARG n 6 229.738 303.952 272.263 1.00 32.59 ATOM 53 CG ARG n 6 229.307 303.787 270.835 1.00 32.59 ATOM 54 CD ARG n 6 228.880 305.088 270.200 1.00 32.59 ATOM 55 NE ARG n 6 227.537 305.493 270.596 1.00 32.59 ATOM 56 CZ ARG n 6 227.247 306.589 271.289 1.00 32.59 ATOM 57 NH1 ARG n 6 228.209 307.409 271.678 1.00 32.59 ATOM 58 NH2 ARG n 6 225.985 306.863 271.590 1.00 32.59 ATOM 59 N LYS n 7 231.250 303.412 275.016 1.00 32.03 ATOM 60 CA LYS n 7 232.335 303.774 275.918 1.00 32.03 ATOM 61 C LYS n 7 233.223 302.573 276.216 1.00 32.03 ATOM 62 O LYS n 7 234.452 302.692 276.222 1.00 32.03 ATOM 63 CB LYS n 7 231.766 304.360 277.205 1.00 32.03 ATOM 64 CG LYS n 7 232.764 305.104 278.044 1.00 32.03 ATOM 65 CD LYS n 7 232.045 305.810 279.163 1.00 32.03 ATOM 66 CE LYS n 7 232.974 306.756 279.884 1.00 32.03 ATOM 67 NZ LYS n 7 232.290 307.472 280.983 1.00 32.03 ATOM 68 N LYS n 8 232.619 301.395 276.391 1.00 30.53 ATOM 69 CA LYS n 8 233.398 300.197 276.690 1.00 30.53 ATOM 70 C LYS n 8 234.224 299.749 275.493 1.00 30.53 ATOM 71 O LYS n 8 235.404 299.402 275.644 1.00 30.53 ATOM 72 CB LYS n 8 232.481 299.073 277.140 1.00 30.53 ATOM 73 CG LYS n 8 233.209 297.867 277.645 1.00 30.53 ATOM 74 CD LYS n 8 232.226 296.872 278.215 1.00 30.53 ATOM 75 CE LYS n 8 232.940 295.686 278.796 1.00 30.53 ATOM 76 NZ LYS n 8 233.722 296.078 279.987 1.00 30.53 ATOM 77 N ARG n 9 233.629 299.758 274.295 1.00 35.05 ATOM 78 CA ARG n 9 234.377 299.379 273.103 1.00 35.05 ATOM 79 C ARG n 9 235.479 300.379 272.794 1.00 35.05 ATOM 80 O ARG n 9 236.568 299.993 272.344 1.00 35.05 ATOM 81 CB ARG n 9 233.430 299.236 271.918 1.00 35.05 ATOM 82 CG ARG n 9 234.109 298.745 270.673 1.00 35.05 ATOM 83 CD ARG n 9 233.109 298.486 269.588 1.00 35.05 ATOM 84 NE ARG n 9 232.481 299.703 269.113 1.00 35.05 ATOM 85 CZ ARG n 9 231.437 299.707 268.300 1.00 35.05 ATOM 86 NH1 ARG n 9 230.909 300.852 267.900 1.00 35.05 ATOM 87 NH2 ARG n 9 230.913 298.560 267.906 1.00 35.05 ATOM 88 N MET n 10 235.247 301.653 273.094 1.00 34.24 ATOM 89 CA MET n 10 236.275 302.642 272.845 1.00 34.24 ATOM 90 C MET n 10 237.394 302.536 273.866 1.00 34.24 ATOM 91 O MET n 10 238.550 302.782 273.520 1.00 34.24 ATOM 92 CB MET n 10 235.625 304.018 272.809 1.00 34.24 ATOM 93 CG MET n 10 236.487 305.166 272.377 1.00 34.24 ATOM 94 SD MET n 10 235.368 306.528 272.012 1.00 34.24 ATOM 95 CE MET n 10 234.647 306.831 273.622 1.00 34.24 ATOM 96 N ARG n 11 237.097 302.083 275.092 1.00 34.76 ATOM 97 CA ARG n 11 238.176 301.771 276.032 1.00 34.76 ATOM 98 C ARG n 11 238.994 300.581 275.567 1.00 34.76 ATOM 99 O ARG n 11 240.219 300.568 275.734 1.00 34.76 ATOM 100 CB ARG n 11 237.644 301.467 277.425 1.00 34.76 ATOM 101 CG ARG n 11 237.015 302.593 278.166 1.00 34.76 ATOM 102 CD ARG n 11 236.723 302.116 279.567 1.00 34.76 ATOM 103 NE ARG n 11 235.741 302.942 280.251 1.00 34.76 ATOM 104 CZ ARG n 11 236.012 304.091 280.846 1.00 34.76 ATOM 105 NH1 ARG n 11 237.232 304.580 280.816 1.00 34.76 ATOM 106 NH2 ARG n 11 235.057 304.760 281.449 1.00 34.76 ATOM 107 N ARG n 12 238.335 299.560 275.012 1.00 34.22 ATOM 108 CA ARG n 12 239.092 298.399 274.559 1.00 34.22 ATOM 109 C ARG n 12 239.983 298.737 273.369 1.00 34.22 ATOM 110 O ARG n 12 241.127 298.263 273.295 1.00 34.22 ATOM 111 CB ARG n 12 238.162 297.235 274.228 1.00 34.22 ATOM 112 CG ARG n 12 237.476 296.659 275.453 1.00 34.22 ATOM 113 CD ARG n 12 237.163 295.169 275.293 1.00 34.22 ATOM 114 NE ARG n 12 236.078 294.835 274.379 1.00 34.22 ATOM 115 CZ ARG n 12 234.836 294.604 274.773 1.00 34.22 ATOM 116 NH1 ARG n 12 234.548 294.670 276.053 1.00 34.22 ATOM 117 NH2 ARG n 12 233.902 294.293 273.894 1.00 34.22 ATOM 118 N LEU n 13 239.530 299.615 272.475 1.00 33.53 ATOM 119 CA LEU n 13 240.418 299.971 271.377 1.00 33.53 ATOM 120 C LEU n 13 241.479 300.971 271.816 1.00 33.53 ATOM 121 O LEU n 13 242.566 300.983 271.237 1.00 33.53 ATOM 122 CB LEU n 13 239.633 300.476 270.167 1.00 33.53 ATOM 123 CG LEU n 13 238.839 301.776 270.100 1.00 33.53 ATOM 124 CD1 LEU n 13 239.671 302.936 269.563 1.00 33.53 ATOM 125 CD2 LEU n 13 237.628 301.566 269.233 1.00 33.53 ATOM 126 N LYS n 14 241.221 301.781 272.852 1.00 31.76 ATOM 127 CA LYS n 14 242.303 302.582 273.426 1.00 31.76 ATOM 128 C LYS n 14 243.362 301.706 274.069 1.00 31.76 ATOM 129 O LYS n 14 244.554 302.031 274.009 1.00 31.76 ATOM 130 CB LYS n 14 241.777 303.562 274.471 1.00 31.76 ATOM 131 CG LYS n 14 241.062 304.758 273.915 1.00 31.76 ATOM 132 CD LYS n 14 240.501 305.628 275.019 1.00 31.76 ATOM 133 CE LYS n 14 241.418 306.795 275.358 1.00 31.76 ATOM 134 NZ LYS n 14 242.664 306.419 276.064 1.00 31.76 ATOM 135 N ARG n 15 242.950 300.595 274.673 1.00 32.74 ATOM 136 CA ARG n 15 243.920 299.684 275.261 1.00 32.74 ATOM 137 C ARG n 15 244.750 299.004 274.183 1.00 32.74 ATOM 138 O ARG n 15 245.964 298.846 274.344 1.00 32.74 ATOM 139 CB ARG n 15 243.214 298.651 276.128 1.00 32.74 ATOM 140 CG ARG n 15 244.153 297.880 277.012 1.00 32.74 ATOM 141 CD ARG n 15 243.436 296.819 277.816 1.00 32.74 ATOM 142 NE ARG n 15 242.402 297.372 278.676 1.00 32.74 ATOM 143 CZ ARG n 15 241.115 297.085 278.545 1.00 32.74 ATOM 144 NH1 ARG n 15 240.222 297.621 279.358 1.00 32.74 ATOM 145 NH2 ARG n 15 240.728 296.247 277.597 1.00 32.74 ATOM 146 N LYS n 16 244.125 298.650 273.055 1.00 34.05 ATOM 147 CA LYS n 16 244.895 298.082 271.947 1.00 34.05 ATOM 148 C LYS n 16 245.851 299.104 271.337 1.00 34.05 ATOM 149 O LYS n 16 246.987 298.758 270.984 1.00 34.05 ATOM 150 CB LYS n 16 243.965 297.531 270.870 1.00 34.05 ATOM 151 CG LYS n 16 243.052 296.428 271.344 1.00 34.05 ATOM 152 CD LYS n 16 243.832 295.200 271.753 1.00 34.05 ATOM 153 CE LYS n 16 242.902 294.084 272.185 1.00 34.05 ATOM 154 NZ LYS n 16 242.149 293.528 271.033 1.00 34.05 ATOM 155 N ARG n 17 245.414 300.365 271.218 1.00 35.09 ATOM 156 CA ARG n 17 246.284 301.428 270.715 1.00 35.09 ATOM 157 C ARG n 17 247.495 301.635 271.613 1.00 35.09 ATOM 158 O ARG n 17 248.627 301.733 271.124 1.00 35.09 ATOM 159 CB ARG n 17 245.512 302.739 270.591 1.00 35.09 ATOM 160 CG ARG n 17 244.525 302.824 269.456 1.00 35.09 ATOM 161 CD ARG n 17 243.796 304.148 269.522 1.00 35.09 ATOM 162 NE ARG n 17 242.684 304.218 268.587 1.00 35.09 ATOM 163 CZ ARG n 17 242.796 304.644 267.339 1.00 35.09 ATOM 164 NH1 ARG n 17 243.975 305.037 266.878 1.00 35.09 ATOM 165 NH2 ARG n 17 241.734 304.678 266.552 1.00 35.09 ATOM 166 N ARG n 18 247.282 301.705 272.931 1.00 33.86 ATOM 167 CA ARG n 18 248.424 301.980 273.791 1.00 33.86 ATOM 168 C ARG n 18 249.319 300.761 273.917 1.00 33.86 ATOM 169 O ARG n 18 250.526 300.913 274.117 1.00 33.86 ATOM 170 CB ARG n 18 248.007 302.467 275.181 1.00 33.86 ATOM 171 CG ARG n 18 247.464 301.419 276.135 1.00 33.86 ATOM 172 CD ARG n 18 247.426 301.963 277.550 1.00 33.86 ATOM 173 NE ARG n 18 246.537 303.109 277.674 1.00 33.86 ATOM 174 CZ ARG n 18 245.275 303.040 278.079 1.00 33.86 ATOM 175 NH1 ARG n 18 244.749 301.879 278.433 1.00 33.86 ATOM 176 NH2 ARG n 18 244.546 304.141 278.153 1.00 33.86 ATOM 177 N LYS n 19 248.762 299.559 273.735 1.00 34.52 ATOM 178 CA LYS n 19 249.580 298.354 273.695 1.00 34.52 ATOM 179 C LYS n 19 250.504 298.366 272.491 1.00 34.52 ATOM 180 O LYS n 19 251.700 298.078 272.609 1.00 34.52 ATOM 181 CB LYS n 19 248.682 297.127 273.660 1.00 34.52 ATOM 182 CG LYS n 19 249.416 295.815 273.665 1.00 34.52 ATOM 183 CD LYS n 19 248.441 294.661 273.757 1.00 34.52 ATOM 184 CE LYS n 19 249.178 293.350 273.703 1.00 34.52 ATOM 185 NZ LYS n 19 250.059 293.226 274.891 1.00 34.52 ATOM 186 N MET n 20 249.969 298.740 271.331 1.00 34.47 ATOM 187 CA MET n 20 250.776 298.751 270.120 1.00 34.47 ATOM 188 C MET n 20 251.810 299.867 270.145 1.00 34.47 ATOM 189 O MET n 20 252.941 299.685 269.682 1.00 34.47 ATOM 190 CB MET n 20 249.865 298.866 268.909 1.00 34.47 ATOM 191 CG MET n 20 250.568 298.831 267.595 1.00 34.47 ATOM 192 SD MET n 20 249.347 298.603 266.313 1.00 34.47 ATOM 193 CE MET n 20 248.958 296.886 266.633 1.00 34.47 ATOM 194 N ARG n 21 251.472 301.006 270.734 1.00 33.12 ATOM 195 CA ARG n 21 252.448 302.084 270.751 1.00 33.12 ATOM 196 C ARG n 21 253.531 301.846 271.804 1.00 33.12 ATOM 197 O ARG n 21 254.704 302.183 271.580 1.00 33.12 ATOM 198 CB ARG n 21 251.738 303.413 270.965 1.00 33.12 ATOM 199 CG ARG n 21 252.624 304.579 270.734 1.00 33.12 ATOM 200 CD ARG n 21 251.903 305.876 270.839 1.00 33.12 ATOM 201 NE ARG n 21 252.858 306.943 270.614 1.00 33.12 ATOM 202 CZ ARG n 21 252.567 308.229 270.681 1.00 33.12 ATOM 203 NH1 ARG n 21 251.341 308.610 270.982 1.00 33.12 ATOM 204 NH2 ARG n 21 253.506 309.128 270.454 1.00 33.12 ATOM 205 N GLN n 22 253.168 301.236 272.940 1.00 34.38 ATOM 206 CA GLN n 22 254.158 300.781 273.910 1.00 34.38 ATOM 207 C GLN n 22 255.063 299.705 273.329 1.00 34.38 ATOM 208 O GLN n 22 256.251 299.649 273.662 1.00 34.38 ATOM 209 CB GLN n 22 253.444 300.265 275.158 1.00 34.38 ATOM 210 CG GLN n 22 254.353 299.757 276.258 1.00 34.38 ATOM 211 CD GLN n 22 255.307 300.813 276.758 1.00 34.38 ATOM 212 OE1 GLN n 22 256.495 300.798 276.434 1.00 34.38 ATOM 213 NE2 GLN n 22 254.794 301.740 277.558 1.00 34.38 ATOM 214 N ARG n 23 254.527 298.855 272.453 1.00 33.92 ATOM 215 CA ARG n 23 255.364 297.914 271.718 1.00 33.92 ATOM 216 C ARG n 23 256.319 298.638 270.783 1.00 33.92 ATOM 217 O ARG n 23 257.478 298.237 270.630 1.00 33.92 ATOM 218 CB ARG n 23 254.483 296.962 270.921 1.00 33.92 ATOM 219 CG ARG n 23 255.214 295.847 270.239 1.00 33.92 ATOM 220 CD ARG n 23 254.225 294.989 269.513 1.00 33.92 ATOM 221 NE ARG n 23 254.850 293.861 268.852 1.00 33.92 ATOM 222 CZ ARG n 23 254.182 292.985 268.118 1.00 33.92 ATOM 223 NH1 ARG n 23 254.813 291.978 267.547 1.00 33.92 ATOM 224 NH2 ARG n 23 252.877 293.124 267.951 1.00 33.92 ATOM 225 N SER n 24 255.850 299.709 270.150 1.00 34.72 ATOM 226 CA SER n 24 256.687 300.418 269.191 1.00 34.72 ATOM 227 C SER n 24 257.768 301.260 269.849 1.00 34.72 ATOM 228 O SER n 24 258.760 301.579 269.189 1.00 34.72 ATOM 229 CB SER n 24 255.835 301.322 268.316 1.00 34.72 ATOM 230 OG SER n 24 255.363 302.421 269.068 1.00 34.72 ATOM 231 N LYS n 25 257.604 301.647 271.111 1.00 34.85 ATOM 232 CA LYS n 25 258.693 302.353 271.797 1.00 34.85 ATOM 233 C LYS n 25 259.881 301.436 272.065 1.00 34.85 ATOM 234 O LYS n 25 259.779 300.214 271.968 1.00 34.85 ATOM 235 CB LYS n 25 258.234 302.969 273.117 1.00 34.85 ATOM 236 CG LYS n 25 257.308 304.156 272.967 1.00 34.85 ATOM 237 CD LYS n 25 257.144 304.884 274.288 1.00 34.85 ATOM 238 CE LYS n 25 256.288 304.097 275.264 1.00 34.85 ATOM 239 NZ LYS n 25 256.051 304.847 276.523 1.00 34.85 TER