HEADER RECOMBINATION/DNA 31-DEC-69 6OER TITLE Cryo-EM structure of mouse RAG1/2 NFC complex (DNA2) COMPND MOL_ID: 7; COMPND 2 MOLECULE: High mobility group protein B1; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; EXPDTA ELECTRON MICROSCOPY REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU H 120 REMARK 465 SER H 121 DBREF 6OER H 1 163 UNP Q08IE6 HMGB1_HORSE 1 163 SEQRES 1 H 38 PRO SER ALA PHE PHE LEU PHE CYS SER GLU TYR ARG PRO SEQRES 2 H 38 LYS ILE LYS GLY GLU HIS PRO GLY LEU SER ILE GLY ASP SEQRES 3 H 38 VAL ALA LYS LYS LEU GLY GLU MET TRP ASN ASN THR ATOM 1 N PRO H 99 177.577 164.726 190.596 1.00161.48 ATOM 2 CA PRO H 99 178.483 165.544 191.409 1.00161.48 ATOM 3 C PRO H 99 179.524 166.288 190.579 1.00161.48 ATOM 4 O PRO H 99 180.231 165.683 189.776 1.00161.48 ATOM 5 CB PRO H 99 179.150 164.518 192.328 1.00161.48 ATOM 6 CG PRO H 99 179.070 163.237 191.582 1.00161.48 ATOM 7 CD PRO H 99 177.778 163.285 190.823 1.00161.48 ATOM 8 N SER H 100 179.604 167.598 190.780 1.00167.15 ATOM 9 CA SER H 100 180.530 168.473 190.084 1.00167.15 ATOM 10 C SER H 100 181.422 169.191 191.095 1.00167.15 ATOM 11 O SER H 100 181.415 168.887 192.293 1.00167.15 ATOM 12 CB SER H 100 179.758 169.458 189.205 1.00167.15 ATOM 13 N ALA H 101 182.204 170.151 190.599 1.00172.33 ATOM 14 CA ALA H 101 183.105 170.903 191.465 1.00172.33 ATOM 15 C ALA H 101 182.330 171.676 192.526 1.00172.33 ATOM 16 O ALA H 101 182.557 171.507 193.729 1.00172.33 ATOM 17 CB ALA H 101 183.968 171.847 190.626 1.00172.33 ATOM 18 N PHE H 102 181.403 172.535 192.093 1.00179.47 ATOM 19 CA PHE H 102 180.624 173.313 193.049 1.00179.47 ATOM 20 C PHE H 102 179.740 172.411 193.897 1.00179.47 ATOM 21 O PHE H 102 179.445 172.730 195.053 1.00179.47 ATOM 22 CB PHE H 102 179.778 174.360 192.326 1.00179.47 ATOM 23 CG PHE H 102 179.042 175.285 193.254 1.00179.47 ATOM 24 CD1 PHE H 102 179.709 176.317 193.892 1.00179.47 ATOM 25 CD2 PHE H 102 177.691 175.114 193.500 1.00179.47 ATOM 26 CE1 PHE H 102 179.043 177.169 194.747 1.00179.47 ATOM 27 CE2 PHE H 102 177.016 175.963 194.356 1.00179.47 ATOM 28 CZ PHE H 102 177.694 176.992 194.980 1.00179.47 ATOM 29 N PHE H 103 179.310 171.277 193.338 1.00180.85 ATOM 30 CA PHE H 103 178.544 170.306 194.111 1.00180.85 ATOM 31 C PHE H 103 179.305 169.885 195.361 1.00180.85 ATOM 32 O PHE H 103 178.817 170.042 196.485 1.00180.85 ATOM 33 CB PHE H 103 178.230 169.091 193.241 1.00180.85 ATOM 34 CG PHE H 103 177.354 168.074 193.908 1.00180.85 ATOM 35 CD1 PHE H 103 175.982 168.246 193.950 1.00180.85 ATOM 36 CD2 PHE H 103 177.901 166.954 194.507 1.00180.85 ATOM 37 CE1 PHE H 103 175.172 167.309 194.558 1.00180.85 ATOM 38 CE2 PHE H 103 177.095 166.015 195.121 1.00180.85 ATOM 39 CZ PHE H 103 175.727 166.196 195.149 1.00180.85 ATOM 40 N LEU H 104 180.517 169.360 195.178 1.00178.91 ATOM 41 CA LEU H 104 181.370 168.934 196.278 1.00178.91 ATOM 42 C LEU H 104 182.200 170.077 196.853 1.00178.91 ATOM 43 O LEU H 104 183.167 169.826 197.582 1.00178.91 ATOM 44 CB LEU H 104 182.287 167.796 195.823 1.00178.91 ATOM 45 N PHE H 105 181.847 171.321 196.538 1.00175.10 ATOM 46 CA PHE H 105 182.504 172.483 197.119 1.00175.10 ATOM 47 C PHE H 105 181.578 173.340 197.967 1.00175.10 ATOM 48 O PHE H 105 182.065 174.042 198.861 1.00175.10 ATOM 49 CB PHE H 105 183.115 173.357 196.012 1.00175.10 ATOM 50 CG PHE H 105 183.967 174.483 196.522 1.00175.10 ATOM 51 CD1 PHE H 105 185.265 174.249 196.938 1.00175.10 ATOM 52 CD2 PHE H 105 183.472 175.775 196.586 1.00175.10 ATOM 53 CE1 PHE H 105 186.055 175.280 197.408 1.00175.10 ATOM 54 CE2 PHE H 105 184.258 176.812 197.055 1.00175.10 ATOM 55 CZ PHE H 105 185.551 176.564 197.467 1.00175.10 ATOM 56 N CYS H 106 180.266 173.297 197.729 1.00177.87 ATOM 57 CA CYS H 106 179.315 174.104 198.482 1.00177.87 ATOM 58 C CYS H 106 179.004 173.506 199.847 1.00177.87 ATOM 59 O CYS H 106 178.631 174.241 200.767 1.00177.87 ATOM 60 CB CYS H 106 178.025 174.267 197.673 1.00177.87 ATOM 61 SG CYS H 106 176.745 175.274 198.449 1.00177.87 ATOM 62 N SER H 107 179.150 172.190 199.999 1.00180.89 ATOM 63 CA SER H 107 178.824 171.499 201.242 1.00180.89 ATOM 64 C SER H 107 180.054 171.035 202.009 1.00180.89 ATOM 65 O SER H 107 180.061 171.086 203.243 1.00180.89 ATOM 66 CB SER H 107 177.922 170.294 200.955 1.00180.89 ATOM 67 OG SER H 107 178.605 169.307 200.203 1.00180.89 ATOM 68 N GLU H 108 181.095 170.573 201.309 1.00171.85 ATOM 69 CA GLU H 108 182.316 170.156 201.989 1.00171.85 ATOM 70 C GLU H 108 182.975 171.322 202.710 1.00171.85 ATOM 71 O GLU H 108 183.652 171.124 203.725 1.00171.85 ATOM 72 CB GLU H 108 183.289 169.532 200.989 1.00171.85 ATOM 73 N TYR H 109 182.788 172.539 202.204 1.00171.74 ATOM 74 CA TYR H 109 183.279 173.752 202.842 1.00171.74 ATOM 75 C TYR H 109 182.156 174.551 203.487 1.00171.74 ATOM 76 O TYR H 109 182.402 175.646 204.005 1.00171.74 ATOM 77 CB TYR H 109 184.023 174.612 201.823 1.00171.74 ATOM 78 CG TYR H 109 185.289 173.975 201.308 1.00171.74 ATOM 79 CD1 TYR H 109 186.490 174.119 201.988 1.00171.74 ATOM 80 CD2 TYR H 109 185.277 173.203 200.156 1.00171.74 ATOM 81 CE1 TYR H 109 187.649 173.531 201.517 1.00171.74 ATOM 82 CE2 TYR H 109 186.428 172.609 199.681 1.00171.74 ATOM 83 CZ TYR H 109 187.610 172.776 200.364 1.00171.74 ATOM 84 OH TYR H 109 188.756 172.184 199.891 1.00171.74 ATOM 85 N ARG H 110 180.928 174.031 203.456 1.00170.23 ATOM 86 CA ARG H 110 179.813 174.708 204.115 1.00170.23 ATOM 87 C ARG H 110 180.046 174.933 205.602 1.00170.23 ATOM 88 O ARG H 110 179.859 176.073 206.060 1.00170.23 ATOM 89 CB ARG H 110 178.516 173.929 203.873 1.00170.23 ATOM 90 N PRO H 111 180.434 173.935 206.409 1.00167.45 ATOM 91 CA PRO H 111 180.601 174.192 207.850 1.00167.45 ATOM 92 C PRO H 111 181.647 175.245 208.170 1.00167.45 ATOM 93 O PRO H 111 181.513 175.912 209.202 1.00167.45 ATOM 94 CB PRO H 111 180.995 172.821 208.414 1.00167.45 ATOM 95 CG PRO H 111 181.568 172.088 207.268 1.00167.45 ATOM 96 CD PRO H 111 180.791 172.544 206.071 1.00167.45 ATOM 97 N LYS H 112 182.644 175.445 207.305 1.00165.04 ATOM 98 CA LYS H 112 183.657 176.471 207.521 1.00165.04 ATOM 99 C LYS H 112 183.083 177.882 207.533 1.00165.04 ATOM 100 O LYS H 112 183.817 178.826 207.847 1.00165.04 ATOM 101 CB LYS H 112 184.742 176.368 206.449 1.00165.04 ATOM 102 N ILE H 113 181.807 178.051 207.192 1.00165.22 ATOM 103 CA ILE H 113 181.135 179.339 207.311 1.00165.22 ATOM 104 C ILE H 113 179.869 179.157 208.138 1.00165.22 ATOM 105 O ILE H 113 179.361 180.112 208.733 1.00165.22 ATOM 106 CB ILE H 113 180.815 179.937 205.930 1.00165.22 ATOM 107 N LYS H 114 179.359 177.924 208.187 1.00165.71 ATOM 108 CA LYS H 114 178.155 177.650 208.964 1.00165.71 ATOM 109 C LYS H 114 178.433 177.705 210.459 1.00165.71 ATOM 110 O LYS H 114 177.534 178.029 211.243 1.00165.71 ATOM 111 CB LYS H 114 177.574 176.289 208.578 1.00165.71 ATOM 112 N GLY H 115 179.661 177.392 210.874 1.00161.22 ATOM 113 CA GLY H 115 180.074 177.668 212.236 1.00161.22 ATOM 114 C GLY H 115 180.210 179.142 212.542 1.00161.22 ATOM 115 O GLY H 115 180.400 179.505 213.708 1.00161.22 ATOM 116 N GLU H 116 180.119 179.991 211.521 1.00166.41 ATOM 117 CA GLU H 116 180.102 181.438 211.669 1.00166.41 ATOM 118 C GLU H 116 178.784 182.048 211.214 1.00166.41 ATOM 119 O GLU H 116 178.172 182.824 211.954 1.00166.41 ATOM 120 CB GLU H 116 181.266 182.055 210.882 1.00166.41 ATOM 121 CG GLU H 116 181.393 183.556 211.044 1.00166.41 ATOM 122 CD GLU H 116 181.755 183.956 212.461 1.00166.41 ATOM 123 OE1 GLU H 116 182.383 183.142 213.170 1.00166.41 ATOM 124 OE2 GLU H 116 181.409 185.085 212.867 1.00166.41 ATOM 125 N HIS H 117 178.326 181.708 210.008 1.00165.20 ATOM 126 CA HIS H 117 177.039 182.178 209.508 1.00165.20 ATOM 127 C HIS H 117 175.935 181.245 209.983 1.00165.20 ATOM 128 O HIS H 117 176.001 180.039 209.706 1.00165.20 ATOM 129 CB HIS H 117 177.029 182.229 207.990 1.00165.20 ATOM 130 CG HIS H 117 178.002 183.201 207.402 1.00165.20 ATOM 131 ND1 HIS H 117 177.801 184.564 207.428 1.00165.20 ATOM 132 CD2 HIS H 117 179.173 183.005 206.751 1.00165.20 ATOM 133 CE1 HIS H 117 178.813 185.167 206.829 1.00165.20 ATOM 134 NE2 HIS H 117 179.658 184.244 206.409 1.00165.20 ATOM 135 N PRO H 118 174.911 181.740 210.683 1.00162.10 ATOM 136 CA PRO H 118 173.759 180.880 210.986 1.00162.10 ATOM 137 C PRO H 118 172.950 180.515 209.755 1.00162.10 ATOM 138 O PRO H 118 172.242 179.500 209.776 1.00162.10 ATOM 139 CB PRO H 118 172.939 181.724 211.969 1.00162.10 ATOM 140 CG PRO H 118 173.304 183.130 211.643 1.00162.10 ATOM 141 CD PRO H 118 174.748 183.099 211.225 1.00162.10 ATOM 142 N GLY H 119 173.036 181.304 208.689 1.00152.88 ATOM 143 CA GLY H 119 172.326 181.017 207.459 1.00152.88 ATOM 144 C GLY H 119 173.120 181.411 206.229 1.00152.88 ATOM 145 O GLY H 119 172.551 181.704 205.179 1.00152.88 ATOM 146 N ILE H 122 170.218 178.685 204.936 1.00161.39 ATOM 147 CA ILE H 122 171.663 178.498 204.945 1.00161.39 ATOM 148 C ILE H 122 172.274 179.031 203.655 1.00161.39 ATOM 149 O ILE H 122 173.154 178.403 203.066 1.00161.39 ATOM 150 CB ILE H 122 172.029 177.020 205.150 1.00161.39 ATOM 151 N GLY H 123 171.804 180.197 203.221 1.00155.30 ATOM 152 CA GLY H 123 172.271 180.782 201.981 1.00155.30 ATOM 153 C GLY H 123 173.490 181.665 202.139 1.00155.30 ATOM 154 O GLY H 123 174.423 181.589 201.335 1.00155.30 ATOM 155 N ASP H 124 173.492 182.507 203.175 1.00155.48 ATOM 156 CA ASP H 124 174.581 183.461 203.353 1.00155.48 ATOM 157 C ASP H 124 175.909 182.766 203.623 1.00155.48 ATOM 158 O ASP H 124 176.966 183.297 203.266 1.00155.48 ATOM 159 CB ASP H 124 174.251 184.432 204.487 1.00155.48 ATOM 160 N VAL H 125 175.878 181.588 204.249 1.00157.45 ATOM 161 CA VAL H 125 177.112 180.856 204.530 1.00157.45 ATOM 162 C VAL H 125 177.801 180.466 203.228 1.00157.45 ATOM 163 O VAL H 125 178.950 180.843 202.971 1.00157.45 ATOM 164 CB VAL H 125 176.820 179.622 205.401 1.00157.45 ATOM 165 N ALA H 126 177.103 179.705 202.386 1.00157.43 ATOM 166 CA ALA H 126 177.657 179.286 201.106 1.00157.43 ATOM 167 C ALA H 126 177.728 180.417 200.090 1.00157.43 ATOM 168 O ALA H 126 178.292 180.215 199.008 1.00157.43 ATOM 169 CB ALA H 126 176.832 178.133 200.536 1.00157.43 ATOM 170 N LYS H 127 177.168 181.588 200.402 1.00159.43 ATOM 171 CA LYS H 127 177.186 182.700 199.459 1.00159.43 ATOM 172 C LYS H 127 178.614 183.114 199.121 1.00159.43 ATOM 173 O LYS H 127 179.047 183.012 197.967 1.00159.43 ATOM 174 CB LYS H 127 176.394 183.870 200.045 1.00159.43 ATOM 175 CG LYS H 127 176.115 184.997 199.078 1.00159.43 ATOM 176 CD LYS H 127 175.257 186.054 199.744 1.00159.43 ATOM 177 CE LYS H 127 173.857 185.526 200.010 1.00159.43 ATOM 178 NZ LYS H 127 173.114 185.269 198.750 1.00159.43 ATOM 179 N LYS H 128 179.366 183.580 200.121 1.00157.22 ATOM 180 CA LYS H 128 180.768 183.916 199.907 1.00157.22 ATOM 181 C LYS H 128 181.596 182.710 199.488 1.00157.22 ATOM 182 O LYS H 128 182.646 182.882 198.858 1.00157.22 ATOM 183 CB LYS H 128 181.360 184.538 201.172 1.00157.22 ATOM 184 N LEU H 129 181.148 181.500 199.823 1.00163.21 ATOM 185 CA LEU H 129 181.795 180.304 199.301 1.00163.21 ATOM 186 C LEU H 129 181.680 180.243 197.783 1.00163.21 ATOM 187 O LEU H 129 182.630 179.839 197.102 1.00163.21 ATOM 188 CB LEU H 129 181.181 179.065 199.949 1.00163.21 ATOM 189 CG LEU H 129 181.845 177.720 199.693 1.00163.21 ATOM 190 CD1 LEU H 129 183.254 177.741 200.245 1.00163.21 ATOM 191 CD2 LEU H 129 181.033 176.633 200.356 1.00163.21 ATOM 192 N GLY H 130 180.540 180.668 197.235 1.00163.19 ATOM 193 CA GLY H 130 180.432 180.806 195.794 1.00163.19 ATOM 194 C GLY H 130 181.371 181.850 195.228 1.00163.19 ATOM 195 O GLY H 130 181.928 181.663 194.143 1.00163.19 ATOM 196 N GLU H 131 181.576 182.953 195.953 1.00159.63 ATOM 197 CA GLU H 131 182.493 183.986 195.479 1.00159.63 ATOM 198 C GLU H 131 183.933 183.495 195.466 1.00159.63 ATOM 199 O GLU H 131 184.692 183.812 194.542 1.00159.63 ATOM 200 CB GLU H 131 182.367 185.237 196.347 1.00159.63 ATOM 201 N MET H 132 184.326 182.716 196.473 1.00166.44 ATOM 202 CA MET H 132 185.676 182.164 196.503 1.00166.44 ATOM 203 C MET H 132 185.836 180.951 195.595 1.00166.44 ATOM 204 O MET H 132 186.973 180.565 195.301 1.00166.44 ATOM 205 CB MET H 132 186.077 181.804 197.936 1.00166.44 ATOM 206 CG MET H 132 185.264 180.697 198.559 1.00166.44 ATOM 207 SD MET H 132 185.678 180.463 200.295 1.00166.44 ATOM 208 CE MET H 132 184.923 181.917 201.015 1.00166.44 ATOM 209 N TRP H 133 184.734 180.341 195.153 1.00173.77 ATOM 210 CA TRP H 133 184.775 179.377 194.061 1.00173.77 ATOM 211 C TRP H 133 184.828 180.043 192.694 1.00173.77 ATOM 212 O TRP H 133 185.336 179.439 191.743 1.00173.77 ATOM 213 CB TRP H 133 183.550 178.456 194.121 1.00173.77 ATOM 214 CG TRP H 133 183.537 177.379 193.078 1.00173.77 ATOM 215 CD1 TRP H 133 184.411 176.337 192.963 1.00173.77 ATOM 216 CD2 TRP H 133 182.597 177.234 192.006 1.00173.77 ATOM 217 NE1 TRP H 133 184.075 175.554 191.886 1.00173.77 ATOM 218 CE2 TRP H 133 182.965 176.084 191.281 1.00173.77 ATOM 219 CE3 TRP H 133 181.483 177.967 191.588 1.00173.77 ATOM 220 CZ2 TRP H 133 182.258 175.649 190.163 1.00173.77 ATOM 221 CZ3 TRP H 133 180.782 177.534 190.480 1.00173.77 ATOM 222 CH2 TRP H 133 181.172 176.386 189.779 1.00173.77 ATOM 223 N ASN H 134 184.310 181.267 192.581 1.00169.98 ATOM 224 CA ASN H 134 184.357 182.002 191.323 1.00169.98 ATOM 225 C ASN H 134 185.710 182.667 191.114 1.00169.98 ATOM 226 O ASN H 134 186.212 182.712 189.986 1.00169.98 ATOM 227 CB ASN H 134 183.249 183.054 191.289 1.00169.98 ATOM 228 CG ASN H 134 181.870 182.445 191.189 1.00169.98 ATOM 229 OD1 ASN H 134 181.648 181.503 190.430 1.00169.98 ATOM 230 ND2 ASN H 134 180.933 182.978 191.961 1.00169.98 ATOM 231 N ASN H 135 186.300 183.204 192.184 1.00163.97 ATOM 232 CA ASN H 135 187.602 183.853 192.065 1.00163.97 ATOM 233 C ASN H 135 188.648 182.895 191.507 1.00163.97 ATOM 234 O ASN H 135 189.446 183.271 190.642 1.00163.97 ATOM 235 CB ASN H 135 188.043 184.397 193.423 1.00163.97 ATOM 236 N THR H 136 188.653 181.654 191.982 1.00163.17 ATOM 237 CA THR H 136 189.598 180.652 191.504 1.00163.17 ATOM 238 C THR H 136 189.174 180.096 190.149 1.00163.17 ATOM 239 O THR H 136 189.198 180.803 189.142 1.00163.17 ATOM 240 CB THR H 136 189.744 179.491 192.504 1.00163.17 ATOM 241 OG1 THR H 136 190.785 178.610 192.066 1.00163.17 ATOM 242 CG2 THR H 136 188.444 178.713 192.613 1.00163.17 TER