HEADER RIBOSOME 31-DEC-69 6OLG TITLE Human ribosome nascent chain complex stalled by a drug-like small TITLE 2 molecule (CDH1_RNC with PP tRNA) COMPND MOL_ID: 52; COMPND 2 MOLECULE: 18S ribosomal RNA; COMPND 3 CHAIN: B1; COMPND 4 MOL_ID: 45; COMPND 5 60S ribosomal protein L41; COMPND 6 CHAIN: An; EXPDTA ELECTRON MICROSCOPY DBREF 6OLG A 1 25 UNP P62945 RL41_HUMAN 1 25 SEQRES 1 An 25 MET ARG ALA LYS TRP ARG LYS LYS ARG MET ARG ARG LEU SEQRES 2 An 25 LYS ARG LYS ARG ARG LYS MET ARG GLN ARG SER LYS ATOM 1 N MET A 1 241.741 258.414 182.304 1.00 75.74 ATOM 2 CA MET A 1 242.413 257.260 182.882 1.00 75.74 ATOM 3 C MET A 1 243.008 256.381 181.801 1.00 75.74 ATOM 4 O MET A 1 242.332 256.045 180.834 1.00 75.74 ATOM 5 CB MET A 1 241.445 256.458 183.746 1.00 75.74 ATOM 6 CG MET A 1 242.059 255.241 184.398 1.00 75.74 ATOM 7 SD MET A 1 240.925 254.450 185.547 1.00 75.74 ATOM 8 CE MET A 1 239.690 253.840 184.414 1.00 75.74 ATOM 9 N ARG A 2 244.281 256.029 181.969 1.00 72.75 ATOM 10 CA ARG A 2 244.954 255.157 181.019 1.00 72.75 ATOM 11 C ARG A 2 244.345 253.763 181.027 1.00 72.75 ATOM 12 O ARG A 2 243.805 253.304 182.042 1.00 72.75 ATOM 13 CB ARG A 2 246.431 255.029 181.359 1.00 72.75 ATOM 14 CG ARG A 2 247.294 256.243 181.197 1.00 72.75 ATOM 15 CD ARG A 2 248.693 255.802 181.569 1.00 72.75 ATOM 16 NE ARG A 2 249.709 256.835 181.464 1.00 72.75 ATOM 17 CZ ARG A 2 250.060 257.640 182.459 1.00 72.75 ATOM 18 NH1 ARG A 2 249.464 257.548 183.632 1.00 72.75 ATOM 19 NH2 ARG A 2 251.004 258.551 182.275 1.00 72.75 ATOM 20 N ALA A 3 244.473 253.073 179.891 1.00 72.61 ATOM 21 CA ALA A 3 244.091 251.665 179.827 1.00 72.61 ATOM 22 C ALA A 3 244.978 250.816 180.726 1.00 72.61 ATOM 23 O ALA A 3 244.534 249.788 181.251 1.00 72.61 ATOM 24 CB ALA A 3 244.163 251.166 178.387 1.00 72.61 ATOM 25 N LYS A 4 246.235 251.241 180.901 1.00 73.18 ATOM 26 CA LYS A 4 247.166 250.645 181.857 1.00 73.18 ATOM 27 C LYS A 4 246.577 250.562 183.261 1.00 73.18 ATOM 28 O LYS A 4 246.450 249.470 183.832 1.00 73.18 ATOM 29 CB LYS A 4 248.439 251.485 181.873 1.00 73.18 ATOM 30 CG LYS A 4 249.534 251.043 182.802 1.00 73.18 ATOM 31 CD LYS A 4 250.233 249.838 182.259 1.00 73.18 ATOM 32 CE LYS A 4 251.536 249.641 182.980 1.00 73.18 ATOM 33 NZ LYS A 4 251.310 249.335 184.411 1.00 73.18 ATOM 34 N TRP A 5 246.174 251.700 183.822 1.00 73.77 ATOM 35 CA TRP A 5 245.701 251.680 185.198 1.00 73.77 ATOM 36 C TRP A 5 244.272 251.168 185.275 1.00 73.77 ATOM 37 O TRP A 5 243.831 250.716 186.338 1.00 73.77 ATOM 38 CB TRP A 5 245.804 253.065 185.814 1.00 73.77 ATOM 39 CG TRP A 5 247.126 253.662 185.617 1.00 73.77 ATOM 40 CD1 TRP A 5 247.429 254.658 184.752 1.00 73.77 ATOM 41 CD2 TRP A 5 248.353 253.278 186.233 1.00 73.77 ATOM 42 NE1 TRP A 5 248.755 254.950 184.816 1.00 73.77 ATOM 43 CE2 TRP A 5 249.351 254.116 185.716 1.00 73.77 ATOM 44 CE3 TRP A 5 248.705 252.324 187.188 1.00 73.77 ATOM 45 CZ2 TRP A 5 250.669 254.033 186.106 1.00 73.77 ATOM 46 CZ3 TRP A 5 250.023 252.241 187.573 1.00 73.77 ATOM 47 CH2 TRP A 5 250.988 253.092 187.034 1.00 73.77 ATOM 48 N ARG A 6 243.537 251.212 184.158 1.00 75.64 ATOM 49 CA ARG A 6 242.224 250.576 184.144 1.00 75.64 ATOM 50 C ARG A 6 242.354 249.065 184.265 1.00 75.64 ATOM 51 O ARG A 6 241.614 248.426 185.030 1.00 75.64 ATOM 52 CB ARG A 6 241.465 250.951 182.878 1.00 75.64 ATOM 53 CG ARG A 6 240.041 250.463 182.902 1.00 75.64 ATOM 54 CD ARG A 6 239.231 251.005 181.751 1.00 75.64 ATOM 55 NE ARG A 6 237.885 250.447 181.768 1.00 75.64 ATOM 56 CZ ARG A 6 236.869 250.947 182.465 1.00 75.64 ATOM 57 NH1 ARG A 6 237.029 252.033 183.208 1.00 75.64 ATOM 58 NH2 ARG A 6 235.684 250.359 182.416 1.00 75.64 ATOM 59 N LYS A 7 243.322 248.484 183.551 1.00 76.06 ATOM 60 CA LYS A 7 243.631 247.071 183.721 1.00 76.06 ATOM 61 C LYS A 7 244.143 246.778 185.118 1.00 76.06 ATOM 62 O LYS A 7 243.841 245.722 185.678 1.00 76.06 ATOM 63 CB LYS A 7 244.659 246.615 182.696 1.00 76.06 ATOM 64 CG LYS A 7 244.111 246.434 181.309 1.00 76.06 ATOM 65 CD LYS A 7 245.233 246.103 180.352 1.00 76.06 ATOM 66 CE LYS A 7 245.819 244.744 180.656 1.00 76.06 ATOM 67 NZ LYS A 7 246.880 244.392 179.684 1.00 76.06 ATOM 68 N LYS A 8 244.912 247.703 185.701 1.00 76.14 ATOM 69 CA LYS A 8 245.404 247.482 187.060 1.00 76.14 ATOM 70 C LYS A 8 244.271 247.479 188.085 1.00 76.14 ATOM 71 O LYS A 8 244.253 246.636 188.992 1.00 76.14 ATOM 72 CB LYS A 8 246.467 248.518 187.421 1.00 76.14 ATOM 73 CG LYS A 8 247.057 248.294 188.801 1.00 76.14 ATOM 74 CD LYS A 8 248.277 249.135 189.080 1.00 76.14 ATOM 75 CE LYS A 8 249.493 248.517 188.412 1.00 76.14 ATOM 76 NZ LYS A 8 250.764 249.169 188.805 1.00 76.14 ATOM 77 N ARG A 9 243.300 248.384 187.945 1.00 80.13 ATOM 78 CA ARG A 9 242.198 248.399 188.904 1.00 80.13 ATOM 79 C ARG A 9 241.275 247.206 188.714 1.00 80.13 ATOM 80 O ARG A 9 240.790 246.638 189.702 1.00 80.13 ATOM 81 CB ARG A 9 241.416 249.706 188.828 1.00 80.13 ATOM 82 CG ARG A 9 242.241 250.834 189.357 1.00 80.13 ATOM 83 CD ARG A 9 241.496 252.122 189.653 1.00 80.13 ATOM 84 NE ARG A 9 242.502 253.110 190.035 1.00 80.13 ATOM 85 CZ ARG A 9 243.033 253.218 191.251 1.00 80.13 ATOM 86 NH1 ARG A 9 242.652 252.415 192.235 1.00 80.13 ATOM 87 NH2 ARG A 9 243.972 254.122 191.481 1.00 80.13 ATOM 88 N MET A 10 241.053 246.780 187.467 1.00 79.03 ATOM 89 CA MET A 10 240.240 245.584 187.260 1.00 79.03 ATOM 90 C MET A 10 240.972 244.336 187.747 1.00 79.03 ATOM 91 O MET A 10 240.349 243.402 188.262 1.00 79.03 ATOM 92 CB MET A 10 239.856 245.451 185.789 1.00 79.03 ATOM 93 CG MET A 10 238.702 244.503 185.572 1.00 79.03 ATOM 94 SD MET A 10 237.234 245.215 186.334 1.00 79.03 ATOM 95 CE MET A 10 236.279 243.758 186.733 1.00 79.03 ATOM 96 N ARG A 11 242.300 244.341 187.658 1.00 76.89 ATOM 97 CA ARG A 11 243.102 243.224 188.134 1.00 76.89 ATOM 98 C ARG A 11 243.060 243.131 189.653 1.00 76.89 ATOM 99 O ARG A 11 242.916 242.038 190.220 1.00 76.89 ATOM 100 CB ARG A 11 244.524 243.424 187.621 1.00 76.89 ATOM 101 CG ARG A 11 245.494 242.288 187.740 1.00 76.89 ATOM 102 CD ARG A 11 246.715 242.724 186.966 1.00 76.89 ATOM 103 NE ARG A 11 247.806 241.763 186.960 1.00 76.89 ATOM 104 CZ ARG A 11 248.949 241.961 186.312 1.00 76.89 ATOM 105 NH1 ARG A 11 249.129 243.077 185.625 1.00 76.89 ATOM 106 NH2 ARG A 11 249.911 241.048 186.342 1.00 76.89 ATOM 107 N ARG A 12 243.136 244.277 190.324 1.00 79.00 ATOM 108 CA ARG A 12 243.072 244.291 191.779 1.00 79.00 ATOM 109 C ARG A 12 241.682 243.909 192.271 1.00 79.00 ATOM 110 O ARG A 12 241.542 243.196 193.276 1.00 79.00 ATOM 111 CB ARG A 12 243.472 245.671 192.282 1.00 79.00 ATOM 112 CG ARG A 12 243.562 245.809 193.770 1.00 79.00 ATOM 113 CD ARG A 12 244.088 247.186 194.094 1.00 79.00 ATOM 114 NE ARG A 12 245.474 247.337 193.660 1.00 79.00 ATOM 115 CZ ARG A 12 246.124 248.495 193.621 1.00 79.00 ATOM 116 NH1 ARG A 12 245.510 249.613 193.980 1.00 79.00 ATOM 117 NH2 ARG A 12 247.387 248.537 193.216 1.00 79.00 ATOM 118 N LEU A 13 240.643 244.347 191.553 1.00 79.10 ATOM 119 CA LEU A 13 239.282 243.936 191.877 1.00 79.10 ATOM 120 C LEU A 13 239.099 242.437 191.693 1.00 79.10 ATOM 121 O LEU A 13 238.411 241.784 192.489 1.00 79.10 ATOM 122 CB LEU A 13 238.290 244.696 191.002 1.00 79.10 ATOM 123 CG LEU A 13 236.821 244.406 191.285 1.00 79.10 ATOM 124 CD1 LEU A 13 236.454 244.938 192.650 1.00 79.10 ATOM 125 CD2 LEU A 13 235.936 244.987 190.217 1.00 79.10 ATOM 126 N LYS A 14 239.721 241.878 190.651 1.00 76.24 ATOM 127 CA LYS A 14 239.664 240.441 190.419 1.00 76.24 ATOM 128 C LYS A 14 240.332 239.674 191.548 1.00 76.24 ATOM 129 O LYS A 14 239.829 238.628 191.976 1.00 76.24 ATOM 130 CB LYS A 14 240.327 240.107 189.086 1.00 76.24 ATOM 131 CG LYS A 14 240.197 238.659 188.669 1.00 76.24 ATOM 132 CD LYS A 14 240.988 238.390 187.404 1.00 76.24 ATOM 133 CE LYS A 14 240.326 239.033 186.203 1.00 76.24 ATOM 134 NZ LYS A 14 241.038 238.708 184.940 1.00 76.24 ATOM 135 N ARG A 15 241.446 240.196 192.068 1.00 77.19 ATOM 136 CA ARG A 15 242.109 239.515 193.180 1.00 77.19 ATOM 137 C ARG A 15 241.280 239.600 194.458 1.00 77.19 ATOM 138 O ARG A 15 241.217 238.634 195.234 1.00 77.19 ATOM 139 CB ARG A 15 243.505 240.088 193.401 1.00 77.19 ATOM 140 CG ARG A 15 244.322 239.285 194.392 1.00 77.19 ATOM 141 CD ARG A 15 245.746 239.781 194.482 1.00 77.19 ATOM 142 NE ARG A 15 245.843 241.092 195.106 1.00 77.19 ATOM 143 CZ ARG A 15 246.955 241.816 195.141 1.00 77.19 ATOM 144 NH1 ARG A 15 248.061 241.353 194.580 1.00 77.19 ATOM 145 NH2 ARG A 15 246.962 243.001 195.734 1.00 77.19 ATOM 146 N LYS A 16 240.601 240.732 194.671 1.00 76.35 ATOM 147 CA LYS A 16 239.716 240.858 195.829 1.00 76.35 ATOM 148 C LYS A 16 238.541 239.890 195.742 1.00 76.35 ATOM 149 O LYS A 16 238.172 239.244 196.735 1.00 76.35 ATOM 150 CB LYS A 16 239.205 242.290 195.942 1.00 76.35 ATOM 151 CG LYS A 16 238.403 242.562 197.199 1.00 76.35 ATOM 152 CD LYS A 16 237.815 243.967 197.193 1.00 76.35 ATOM 153 CE LYS A 16 238.686 244.960 197.938 1.00 76.35 ATOM 154 NZ LYS A 16 239.843 245.410 197.124 1.00 76.35 ATOM 155 N ARG A 17 237.966 239.746 194.549 1.00 76.24 ATOM 156 CA ARG A 17 236.821 238.858 194.394 1.00 76.24 ATOM 157 C ARG A 17 237.244 237.396 194.481 1.00 76.24 ATOM 158 O ARG A 17 236.485 236.549 194.971 1.00 76.24 ATOM 159 CB ARG A 17 236.120 239.159 193.076 1.00 76.24 ATOM 160 CG ARG A 17 234.802 238.464 192.891 1.00 76.24 ATOM 161 CD ARG A 17 234.164 238.971 191.634 1.00 76.24 ATOM 162 NE ARG A 17 233.835 240.382 191.762 1.00 76.24 ATOM 163 CZ ARG A 17 233.508 241.164 190.742 1.00 76.24 ATOM 164 NH1 ARG A 17 233.480 240.673 189.515 1.00 76.24 ATOM 165 NH2 ARG A 17 233.223 242.439 190.945 1.00 76.24 ATOM 166 N ARG A 18 238.473 237.087 194.054 1.00 77.14 ATOM 167 CA ARG A 18 238.991 235.734 194.231 1.00 77.14 ATOM 168 C ARG A 18 239.201 235.412 195.706 1.00 77.14 ATOM 169 O ARG A 18 238.923 234.287 196.145 1.00 77.14 ATOM 170 CB ARG A 18 240.297 235.555 193.459 1.00 77.14 ATOM 171 CG ARG A 18 240.795 234.121 193.456 1.00 77.14 ATOM 172 CD ARG A 18 242.125 233.966 192.748 1.00 77.14 ATOM 173 NE ARG A 18 242.060 234.316 191.335 1.00 77.14 ATOM 174 CZ ARG A 18 242.747 235.309 190.786 1.00 77.14 ATOM 175 NH1 ARG A 18 243.560 236.043 191.530 1.00 77.14 ATOM 176 NH2 ARG A 18 242.633 235.561 189.490 1.00 77.14 ATOM 177 N LYS A 19 239.677 236.389 196.491 1.00 75.69 ATOM 178 CA LYS A 19 239.791 236.164 197.932 1.00 75.69 ATOM 179 C LYS A 19 238.426 235.975 198.577 1.00 75.69 ATOM 180 O LYS A 19 238.286 235.186 199.516 1.00 75.69 ATOM 181 CB LYS A 19 240.521 237.311 198.625 1.00 75.69 ATOM 182 CG LYS A 19 242.016 237.348 198.418 1.00 75.69 ATOM 183 CD LYS A 19 242.658 238.320 199.404 1.00 75.69 ATOM 184 CE LYS A 19 242.881 239.697 198.798 1.00 75.69 ATOM 185 NZ LYS A 19 241.623 240.498 198.677 1.00 75.69 ATOM 186 N MET A 20 237.404 236.665 198.069 1.00 74.21 ATOM 187 CA MET A 20 236.067 236.492 198.633 1.00 74.21 ATOM 188 C MET A 20 235.498 235.112 198.312 1.00 74.21 ATOM 189 O MET A 20 234.862 234.476 199.167 1.00 74.21 ATOM 190 CB MET A 20 235.147 237.590 198.122 1.00 74.21 ATOM 191 CG MET A 20 233.809 237.633 198.804 1.00 74.21 ATOM 192 SD MET A 20 232.910 239.071 198.225 1.00 74.21 ATOM 193 CE MET A 20 233.915 240.354 198.959 1.00 74.21 ATOM 194 N ARG A 21 235.743 234.623 197.092 1.00 77.96 ATOM 195 CA ARG A 21 235.326 233.270 196.730 1.00 77.96 ATOM 196 C ARG A 21 236.043 232.218 197.567 1.00 77.96 ATOM 197 O ARG A 21 235.427 231.240 198.009 1.00 77.96 ATOM 198 CB ARG A 21 235.583 233.017 195.248 1.00 77.96 ATOM 199 CG ARG A 21 234.721 233.824 194.315 1.00 77.96 ATOM 200 CD ARG A 21 233.298 233.327 194.338 1.00 77.96 ATOM 201 NE ARG A 21 233.221 231.928 193.933 1.00 77.96 ATOM 202 CZ ARG A 21 233.153 231.518 192.672 1.00 77.96 ATOM 203 NH1 ARG A 21 233.155 232.401 191.685 1.00 77.96 ATOM 204 NH2 ARG A 21 233.084 230.225 192.395 1.00 77.96 ATOM 205 N GLN A 22 237.345 232.399 197.797 1.00 77.81 ATOM 206 CA GLN A 22 238.082 231.418 198.589 1.00 77.81 ATOM 207 C GLN A 22 237.741 231.523 200.068 1.00 77.81 ATOM 208 O GLN A 22 237.938 230.565 200.822 1.00 77.81 ATOM 209 CB GLN A 22 239.583 231.582 198.374 1.00 77.81 ATOM 210 CG GLN A 22 240.035 231.239 196.969 1.00 77.81 ATOM 211 CD GLN A 22 239.865 229.770 196.652 1.00 77.81 ATOM 212 OE1 GLN A 22 240.118 228.911 197.495 1.00 77.81 ATOM 213 NE2 GLN A 22 239.426 229.472 195.435 1.00 77.81 ATOM 214 N ARG A 23 237.240 232.679 200.505 1.00 78.90 ATOM 215 CA ARG A 23 236.776 232.796 201.882 1.00 78.90 ATOM 216 C ARG A 23 235.435 232.104 202.063 1.00 78.90 ATOM 217 O ARG A 23 235.173 231.501 203.110 1.00 78.90 ATOM 218 CB ARG A 23 236.698 234.266 202.281 1.00 78.90 ATOM 219 CG ARG A 23 236.290 234.507 203.717 1.00 78.90 ATOM 220 CD ARG A 23 236.499 235.954 204.078 1.00 78.90 ATOM 221 NE ARG A 23 236.091 236.230 205.445 1.00 78.90 ATOM 222 CZ ARG A 23 234.894 236.692 205.769 1.00 78.90 ATOM 223 NH1 ARG A 23 234.011 236.941 204.816 1.00 78.90 ATOM 224 NH2 ARG A 23 234.585 236.921 207.036 1.00 78.90 ATOM 225 N SER A 24 234.576 232.162 201.053 1.00 82.48 ATOM 226 CA SER A 24 233.396 231.299 201.032 1.00 82.48 ATOM 227 C SER A 24 233.453 230.468 199.757 1.00 82.48 ATOM 228 O SER A 24 232.903 230.857 198.724 1.00 82.48 ATOM 229 CB SER A 24 232.115 232.078 201.120 1.00 82.48 ATOM 230 OG SER A 24 231.013 231.187 201.076 1.00 82.48 ATOM 231 N LYS A 25 234.148 229.338 199.841 1.00 85.12 ATOM 232 CA LYS A 25 234.237 228.318 198.796 1.00 85.12 ATOM 233 C LYS A 25 232.890 227.842 198.254 1.00 85.12 ATOM 234 O LYS A 25 232.821 227.284 197.159 1.00 85.12 ATOM 235 CB LYS A 25 235.004 227.110 199.332 1.00 85.12 ATOM 236 CG LYS A 25 236.464 227.378 199.650 1.00 85.12 ATOM 237 CD LYS A 25 237.126 226.124 200.203 1.00 85.12 ATOM 238 CE LYS A 25 238.575 226.364 200.591 1.00 85.12 ATOM 239 NZ LYS A 25 239.435 226.577 199.399 1.00 85.12 ATOM 240 OXT LYS A 25 231.845 227.993 198.888 1.00 85.12 ATOM 241 MG MG A1901 250.714 254.822 180.574 1.00 63.41 TER