HEADER RIBOSOME 31-DEC-69 6OLI TITLE Structure of human ribosome nascent chain complex selectively stalled TITLE 2 by a drug-like small molecule (USO1-RNC) COMPND MOL_ID: 75; COMPND 2 MOLECULE: 60S ribosomal protein L41; COMPND 3 CHAIN: o; EXPDTA ELECTRON MICROSCOPY DBREF 6OLI o 1 25 UNP P62945 RL41_HUMAN 1 25 SEQRES 1 o 25 MET ARG ALA LYS TRP ARG LYS LYS ARG MET ARG ARG LEU SEQRES 2 o 25 LYS ARG LYS ARG ARG LYS MET ARG GLN ARG SER LYS ATOM 1 N MET o 1 239.099 250.426 175.367 1.00 34.78 ATOM 2 CA MET o 1 239.937 249.473 176.078 1.00 34.78 ATOM 3 C MET o 1 240.584 248.521 175.092 1.00 34.78 ATOM 4 O MET o 1 239.953 248.142 174.113 1.00 34.78 ATOM 5 CB MET o 1 239.110 248.726 177.128 1.00 34.78 ATOM 6 CG MET o 1 239.866 247.684 177.931 1.00 34.78 ATOM 7 SD MET o 1 238.969 247.136 179.375 1.00 34.78 ATOM 8 CE MET o 1 237.587 246.336 178.602 1.00 34.78 ATOM 9 N ARG o 2 241.847 248.173 175.339 1.00 32.38 ATOM 10 CA ARG o 2 242.581 247.313 174.423 1.00 32.38 ATOM 11 C ARG o 2 241.969 245.929 174.390 1.00 32.38 ATOM 12 O ARG o 2 241.426 245.448 175.383 1.00 32.38 ATOM 13 CB ARG o 2 244.053 247.220 174.814 1.00 32.38 ATOM 14 CG ARG o 2 244.726 248.547 174.675 1.00 32.38 ATOM 15 CD ARG o 2 246.209 248.560 174.895 1.00 32.38 ATOM 16 NE ARG o 2 246.641 249.953 174.992 1.00 32.38 ATOM 17 CZ ARG o 2 247.889 250.343 175.210 1.00 32.38 ATOM 18 NH1 ARG o 2 248.860 249.440 175.307 1.00 32.38 ATOM 19 NH2 ARG o 2 248.165 251.638 175.288 1.00 32.38 ATOM 20 N ALA o 3 242.028 245.310 173.218 1.00 29.79 ATOM 21 CA ALA o 3 241.428 244.001 173.050 1.00 29.79 ATOM 22 C ALA o 3 242.175 242.939 173.832 1.00 29.79 ATOM 23 O ALA o 3 241.572 241.947 174.246 1.00 29.79 ATOM 24 CB ALA o 3 241.379 243.643 171.573 1.00 29.79 ATOM 25 N LYS o 4 243.473 243.120 174.061 1.00 25.17 ATOM 26 CA LYS o 4 244.157 242.155 174.902 1.00 25.17 ATOM 27 C LYS o 4 243.877 242.389 176.371 1.00 25.17 ATOM 28 O LYS o 4 244.069 241.477 177.174 1.00 25.17 ATOM 29 CB LYS o 4 245.668 242.163 174.679 1.00 25.17 ATOM 30 CG LYS o 4 246.451 243.230 175.371 1.00 25.17 ATOM 31 CD LYS o 4 247.949 243.000 175.163 1.00 25.17 ATOM 32 CE LYS o 4 248.424 241.750 175.889 1.00 25.17 ATOM 33 NZ LYS o 4 249.904 241.589 175.897 1.00 25.17 ATOM 34 N TRP o 5 243.415 243.573 176.744 1.00 27.89 ATOM 35 CA TRP o 5 243.079 243.851 178.126 1.00 27.89 ATOM 36 C TRP o 5 241.592 243.882 178.379 1.00 27.89 ATOM 37 O TRP o 5 241.184 243.992 179.535 1.00 27.89 ATOM 38 CB TRP o 5 243.708 245.167 178.559 1.00 27.89 ATOM 39 CG TRP o 5 245.139 245.001 178.780 1.00 27.89 ATOM 40 CD1 TRP o 5 245.800 243.846 179.079 1.00 27.89 ATOM 41 CD2 TRP o 5 246.125 245.993 178.613 1.00 27.89 ATOM 42 NE1 TRP o 5 247.146 244.078 179.175 1.00 27.89 ATOM 43 CE2 TRP o 5 247.368 245.396 178.883 1.00 27.89 ATOM 44 CE3 TRP o 5 246.079 247.341 178.286 1.00 27.89 ATOM 45 CZ2 TRP o 5 248.547 246.100 178.828 1.00 27.89 ATOM 46 CZ3 TRP o 5 247.246 248.040 178.239 1.00 27.89 ATOM 47 CH2 TRP o 5 248.467 247.425 178.508 1.00 27.89 ATOM 48 N ARG o 6 240.775 243.810 177.339 1.00 30.21 ATOM 49 CA ARG o 6 239.441 243.294 177.551 1.00 30.21 ATOM 50 C ARG o 6 239.509 241.806 177.831 1.00 30.21 ATOM 51 O ARG o 6 238.747 241.294 178.653 1.00 30.21 ATOM 52 CB ARG o 6 238.560 243.587 176.342 1.00 30.21 ATOM 53 CG ARG o 6 237.110 243.203 176.541 1.00 30.21 ATOM 54 CD ARG o 6 236.266 243.559 175.335 1.00 30.21 ATOM 55 NE ARG o 6 236.180 245.002 175.174 1.00 30.21 ATOM 56 CZ ARG o 6 236.718 245.672 174.165 1.00 30.21 ATOM 57 NH1 ARG o 6 237.378 245.026 173.218 1.00 30.21 ATOM 58 NH2 ARG o 6 236.594 246.987 174.103 1.00 30.21 ATOM 59 N LYS o 7 240.459 241.107 177.189 1.00 29.98 ATOM 60 CA LYS o 7 240.668 239.677 177.430 1.00 29.98 ATOM 61 C LYS o 7 241.124 239.396 178.849 1.00 29.98 ATOM 62 O LYS o 7 240.742 238.379 179.428 1.00 29.98 ATOM 63 CB LYS o 7 241.694 239.099 176.466 1.00 29.98 ATOM 64 CG LYS o 7 241.191 238.729 175.099 1.00 29.98 ATOM 65 CD LYS o 7 242.313 238.088 174.304 1.00 29.98 ATOM 66 CE LYS o 7 242.715 236.747 174.907 1.00 29.98 ATOM 67 NZ LYS o 7 243.723 236.017 174.090 1.00 29.98 ATOM 68 N LYS o 8 241.962 240.262 179.421 1.00 30.26 ATOM 69 CA LYS o 8 242.458 239.962 180.759 1.00 30.26 ATOM 70 C LYS o 8 241.370 240.144 181.804 1.00 30.26 ATOM 71 O LYS o 8 241.249 239.323 182.713 1.00 30.26 ATOM 72 CB LYS o 8 243.696 240.792 181.102 1.00 30.26 ATOM 73 CG LYS o 8 244.268 240.439 182.479 1.00 30.26 ATOM 74 CD LYS o 8 245.634 241.028 182.783 1.00 30.26 ATOM 75 CE LYS o 8 246.716 240.190 182.148 1.00 30.26 ATOM 76 NZ LYS o 8 248.060 240.588 182.609 1.00 30.26 ATOM 77 N ARG o 9 240.527 241.155 181.667 1.00 30.63 ATOM 78 CA ARG o 9 239.524 241.337 182.705 1.00 30.63 ATOM 79 C ARG o 9 238.303 240.444 182.532 1.00 30.63 ATOM 80 O ARG o 9 237.365 240.590 183.312 1.00 30.63 ATOM 81 CB ARG o 9 239.119 242.813 182.808 1.00 30.63 ATOM 82 CG ARG o 9 238.545 243.449 181.569 1.00 30.63 ATOM 83 CD ARG o 9 237.023 243.479 181.546 1.00 30.63 ATOM 84 NE ARG o 9 236.428 244.154 182.693 1.00 30.63 ATOM 85 CZ ARG o 9 236.291 245.466 182.802 1.00 30.63 ATOM 86 NH1 ARG o 9 236.715 246.262 181.837 1.00 30.63 ATOM 87 NH2 ARG o 9 235.722 245.982 183.879 1.00 30.63 ATOM 88 N MET o 10 238.282 239.535 181.551 1.00 36.18 ATOM 89 CA MET o 10 237.291 238.464 181.525 1.00 36.18 ATOM 90 C MET o 10 237.872 237.101 181.824 1.00 36.18 ATOM 91 O MET o 10 237.172 236.274 182.408 1.00 36.18 ATOM 92 CB MET o 10 236.571 238.396 180.169 1.00 36.18 ATOM 93 CG MET o 10 237.497 238.339 178.964 1.00 36.18 ATOM 94 SD MET o 10 238.173 236.779 178.355 1.00 36.18 ATOM 95 CE MET o 10 236.950 236.224 177.198 1.00 36.18 ATOM 96 N ARG o 11 239.137 236.865 181.481 1.00 32.42 ATOM 97 CA ARG o 11 239.820 235.658 181.922 1.00 32.42 ATOM 98 C ARG o 11 240.007 235.687 183.428 1.00 32.42 ATOM 99 O ARG o 11 240.018 234.641 184.083 1.00 32.42 ATOM 100 CB ARG o 11 241.158 235.542 181.198 1.00 32.42 ATOM 101 CG ARG o 11 241.900 234.259 181.434 1.00 32.42 ATOM 102 CD ARG o 11 243.164 234.201 180.605 1.00 32.42 ATOM 103 NE ARG o 11 242.878 234.131 179.176 1.00 32.42 ATOM 104 CZ ARG o 11 243.798 234.270 178.227 1.00 32.42 ATOM 105 NH1 ARG o 11 245.059 234.488 178.553 1.00 32.42 ATOM 106 NH2 ARG o 11 243.464 234.196 176.951 1.00 32.42 ATOM 107 N ARG o 12 240.134 236.888 183.983 1.00 33.90 ATOM 108 CA ARG o 12 240.065 237.099 185.418 1.00 33.90 ATOM 109 C ARG o 12 238.645 236.934 185.936 1.00 33.90 ATOM 110 O ARG o 12 238.453 236.609 187.108 1.00 33.90 ATOM 111 CB ARG o 12 240.601 238.494 185.722 1.00 33.90 ATOM 112 CG ARG o 12 240.736 238.929 187.141 1.00 33.90 ATOM 113 CD ARG o 12 241.270 240.351 187.128 1.00 33.90 ATOM 114 NE ARG o 12 242.635 240.423 186.622 1.00 33.90 ATOM 115 CZ ARG o 12 243.256 241.559 186.325 1.00 33.90 ATOM 116 NH1 ARG o 12 242.628 242.715 186.461 1.00 33.90 ATOM 117 NH2 ARG o 12 244.504 241.543 185.891 1.00 33.90 ATOM 118 N LEU o 13 237.640 237.152 185.092 1.00 31.41 ATOM 119 CA LEU o 13 236.261 237.049 185.548 1.00 31.41 ATOM 120 C LEU o 13 235.687 235.655 185.393 1.00 31.41 ATOM 121 O LEU o 13 234.862 235.251 186.216 1.00 31.41 ATOM 122 CB LEU o 13 235.379 238.067 184.812 1.00 31.41 ATOM 123 CG LEU o 13 233.907 238.260 185.176 1.00 31.41 ATOM 124 CD1 LEU o 13 233.537 239.716 185.124 1.00 31.41 ATOM 125 CD2 LEU o 13 233.073 237.550 184.168 1.00 31.41 ATOM 126 N LYS o 14 236.108 234.900 184.390 1.00 32.25 ATOM 127 CA LYS o 14 235.581 233.556 184.259 1.00 32.25 ATOM 128 C LYS o 14 236.355 232.541 185.081 1.00 32.25 ATOM 129 O LYS o 14 236.003 231.362 185.053 1.00 32.25 ATOM 130 CB LYS o 14 235.525 233.127 182.793 1.00 32.25 ATOM 131 CG LYS o 14 236.829 232.875 182.104 1.00 32.25 ATOM 132 CD LYS o 14 236.548 232.523 180.654 1.00 32.25 ATOM 133 CE LYS o 14 237.798 232.157 179.890 1.00 32.25 ATOM 134 NZ LYS o 14 237.475 231.893 178.460 1.00 32.25 ATOM 135 N ARG o 15 237.403 232.953 185.792 1.00 35.06 ATOM 136 CA ARG o 15 237.915 232.135 186.882 1.00 35.06 ATOM 137 C ARG o 15 237.309 232.510 188.219 1.00 35.06 ATOM 138 O ARG o 15 237.457 231.755 189.181 1.00 35.06 ATOM 139 CB ARG o 15 239.433 232.234 187.005 1.00 35.06 ATOM 140 CG ARG o 15 239.924 233.565 187.497 1.00 35.06 ATOM 141 CD ARG o 15 241.441 233.596 187.659 1.00 35.06 ATOM 142 NE ARG o 15 242.158 233.503 186.394 1.00 35.06 ATOM 143 CZ ARG o 15 243.479 233.478 186.283 1.00 35.06 ATOM 144 NH1 ARG o 15 244.236 233.558 187.368 1.00 35.06 ATOM 145 NH2 ARG o 15 244.049 233.394 185.094 1.00 35.06 ATOM 146 N LYS o 16 236.645 233.655 188.302 1.00 34.55 ATOM 147 CA LYS o 16 235.983 234.034 189.537 1.00 34.55 ATOM 148 C LYS o 16 234.640 233.343 189.654 1.00 34.55 ATOM 149 O LYS o 16 234.225 232.998 190.759 1.00 34.55 ATOM 150 CB LYS o 16 235.846 235.559 189.597 1.00 34.55 ATOM 151 CG LYS o 16 235.390 236.149 190.927 1.00 34.55 ATOM 152 CD LYS o 16 233.887 236.384 191.034 1.00 34.55 ATOM 153 CE LYS o 16 233.430 237.440 190.048 1.00 34.55 ATOM 154 NZ LYS o 16 234.039 238.786 190.289 1.00 34.55 ATOM 155 N ARG o 17 233.966 233.110 188.532 1.00 33.61 ATOM 156 CA ARG o 17 232.726 232.358 188.533 1.00 33.61 ATOM 157 C ARG o 17 232.946 230.871 188.353 1.00 33.61 ATOM 158 O ARG o 17 232.017 230.095 188.577 1.00 33.61 ATOM 159 CB ARG o 17 231.793 232.841 187.423 1.00 33.61 ATOM 160 CG ARG o 17 232.252 232.473 186.027 1.00 33.61 ATOM 161 CD ARG o 17 231.239 232.891 184.967 1.00 33.61 ATOM 162 NE ARG o 17 231.107 234.336 184.811 1.00 33.61 ATOM 163 CZ ARG o 17 230.149 234.902 184.088 1.00 33.61 ATOM 164 NH1 ARG o 17 229.258 234.147 183.481 1.00 33.61 ATOM 165 NH2 ARG o 17 230.066 236.213 183.980 1.00 33.61 ATOM 166 N ARG o 18 234.146 230.451 187.963 1.00 37.09 ATOM 167 CA ARG o 18 234.433 229.027 187.922 1.00 37.09 ATOM 168 C ARG o 18 234.623 228.472 189.324 1.00 37.09 ATOM 169 O ARG o 18 234.546 227.257 189.518 1.00 37.09 ATOM 170 CB ARG o 18 235.666 228.779 187.045 1.00 37.09 ATOM 171 CG ARG o 18 235.807 227.357 186.549 1.00 37.09 ATOM 172 CD ARG o 18 236.929 227.156 185.538 1.00 37.09 ATOM 173 NE ARG o 18 238.271 227.297 186.096 1.00 37.09 ATOM 174 CZ ARG o 18 239.187 228.143 185.639 1.00 37.09 ATOM 175 NH1 ARG o 18 238.914 228.921 184.602 1.00 37.09 ATOM 176 NH2 ARG o 18 240.384 228.194 186.205 1.00 37.09 ATOM 177 N LYS o 19 234.826 229.347 190.304 1.00 37.24 ATOM 178 CA LYS o 19 234.925 229.008 191.712 1.00 37.24 ATOM 179 C LYS o 19 233.598 229.164 192.433 1.00 37.24 ATOM 180 O LYS o 19 233.320 228.426 193.377 1.00 37.24 ATOM 181 CB LYS o 19 235.991 229.889 192.373 1.00 37.24 ATOM 182 CG LYS o 19 236.341 229.519 193.801 1.00 37.24 ATOM 183 CD LYS o 19 237.568 230.267 194.309 1.00 37.24 ATOM 184 CE LYS o 19 237.263 231.716 194.655 1.00 37.24 ATOM 185 NZ LYS o 19 238.432 232.372 195.305 1.00 37.24 ATOM 186 N MET o 20 232.765 230.108 192.004 1.00 42.39 ATOM 187 CA MET o 20 231.467 230.294 192.640 1.00 42.39 ATOM 188 C MET o 20 230.522 229.147 192.326 1.00 42.39 ATOM 189 O MET o 20 229.767 228.704 193.197 1.00 42.39 ATOM 190 CB MET o 20 230.866 231.619 192.202 1.00 42.39 ATOM 191 CG MET o 20 231.639 232.801 192.709 1.00 42.39 ATOM 192 SD MET o 20 230.970 234.311 192.042 1.00 42.39 ATOM 193 CE MET o 20 229.427 234.268 192.905 1.00 42.39 ATOM 194 N ARG o 21 230.534 228.669 191.084 1.00 42.09 ATOM 195 CA ARG o 21 229.851 227.421 190.774 1.00 42.09 ATOM 196 C ARG o 21 230.470 226.263 191.539 1.00 42.09 ATOM 197 O ARG o 21 229.761 225.364 192.001 1.00 42.09 ATOM 198 CB ARG o 21 229.908 227.154 189.272 1.00 42.09 ATOM 199 CG ARG o 21 229.251 225.861 188.820 1.00 42.09 ATOM 200 CD ARG o 21 229.425 225.670 187.326 1.00 42.09 ATOM 201 NE ARG o 21 228.997 224.354 186.867 1.00 42.09 ATOM 202 CZ ARG o 21 227.765 224.055 186.481 1.00 42.09 ATOM 203 NH1 ARG o 21 226.813 224.977 186.493 1.00 42.09 ATOM 204 NH2 ARG o 21 227.481 222.828 186.078 1.00 42.09 ATOM 205 N GLN o 22 231.796 226.276 191.692 1.00 42.22 ATOM 206 CA GLN o 22 232.479 225.210 192.413 1.00 42.22 ATOM 207 C GLN o 22 232.208 225.281 193.907 1.00 42.22 ATOM 208 O GLN o 22 232.117 224.240 194.562 1.00 42.22 ATOM 209 CB GLN o 22 233.978 225.279 192.128 1.00 42.22 ATOM 210 CG GLN o 22 234.819 224.103 192.617 1.00 42.22 ATOM 211 CD GLN o 22 235.383 224.302 194.016 1.00 42.22 ATOM 212 OE1 GLN o 22 235.563 225.429 194.472 1.00 42.22 ATOM 213 NE2 GLN o 22 235.693 223.202 194.691 1.00 42.22 ATOM 214 N ARG o 23 232.091 226.486 194.463 1.00 46.22 ATOM 215 CA ARG o 23 231.714 226.652 195.862 1.00 46.22 ATOM 216 C ARG o 23 230.295 226.174 196.118 1.00 46.22 ATOM 217 O ARG o 23 230.073 225.219 196.868 1.00 46.22 ATOM 218 CB ARG o 23 231.825 228.108 196.286 1.00 46.22 ATOM 219 CG ARG o 23 231.442 228.331 197.720 1.00 46.22 ATOM 220 CD ARG o 23 231.555 229.787 198.078 1.00 46.22 ATOM 221 NE ARG o 23 231.236 230.043 199.477 1.00 46.22 ATOM 222 CZ ARG o 23 230.011 230.281 199.926 1.00 46.22 ATOM 223 NH1 ARG o 23 228.984 230.275 199.088 1.00 46.22 ATOM 224 NH2 ARG o 23 229.812 230.516 201.211 1.00 46.22 ATOM 225 N SER o 24 229.333 226.835 195.489 1.00 54.35 ATOM 226 CA SER o 24 227.942 226.397 195.513 1.00 54.35 ATOM 227 C SER o 24 227.715 225.385 194.398 1.00 54.35 ATOM 228 O SER o 24 227.208 225.706 193.327 1.00 54.35 ATOM 229 CB SER o 24 227.003 227.591 195.385 1.00 54.35 ATOM 230 OG SER o 24 227.146 228.451 196.497 1.00 54.35 ATOM 231 N LYS o 25 228.189 224.172 194.674 1.00 56.93 ATOM 232 CA LYS o 25 228.121 223.013 193.790 1.00 56.93 ATOM 233 C LYS o 25 226.769 222.765 193.145 1.00 56.93 ATOM 234 O LYS o 25 226.602 222.984 191.945 1.00 56.93 ATOM 235 CB LYS o 25 228.519 221.768 194.578 1.00 56.93 ATOM 236 CG LYS o 25 229.987 221.666 194.915 1.00 56.93 ATOM 237 CD LYS o 25 230.781 221.374 193.659 1.00 56.93 ATOM 238 CE LYS o 25 230.348 220.034 193.070 1.00 56.93 ATOM 239 NZ LYS o 25 230.572 218.898 194.013 1.00 56.93 ATOM 240 OXT LYS o 25 225.829 222.351 193.818 1.00 56.93 ATOM 241 MG MG o 101 248.276 246.775 174.703 1.00 15.73 TER