HEADER RIBOSOME 31-DEC-69 6P5I TITLE Structure of a mammalian 80S ribosome in complex with the Israeli TITLE 2 Acute Paralysis Virus IRES (Class 1) COMPND MOL_ID: 77; COMPND 2 MOLECULE: eL41; COMPND 3 CHAIN: An; EXPDTA ELECTRON MICROSCOPY DBREF 6P5I A 1 25 UNP A0A087WN A0A087WNH4_ 1 25 SEQRES 1 An 25 MET ARG ALA LYS TRP ARG LYS LYS ARG MET ARG ARG LEU SEQRES 2 An 25 LYS ARG LYS ARG ARG LYS MET ARG GLN ARG SER LYS ATOM 1 N MET A 1 183.844 249.068 224.463 1.00 56.44 ATOM 2 CA MET A 1 184.984 249.144 225.411 1.00 54.60 ATOM 3 C MET A 1 184.577 249.992 226.619 1.00 50.41 ATOM 4 O MET A 1 184.066 251.110 226.408 1.00 50.31 ATOM 5 CB MET A 1 186.208 249.773 224.739 1.00 57.65 ATOM 6 CG MET A 1 187.394 249.940 225.663 1.00 60.67 ATOM 7 SD MET A 1 188.068 248.365 226.227 1.00 63.41 ATOM 8 CE MET A 1 188.900 247.830 224.739 1.00 61.35 ATOM 9 N ARG A 2 184.807 249.484 227.831 1.00 47.08 ATOM 10 CA ARG A 2 184.602 250.251 229.085 1.00 45.19 ATOM 11 C ARG A 2 185.722 251.288 229.203 1.00 43.94 ATOM 12 O ARG A 2 186.894 250.902 229.050 1.00 44.13 ATOM 13 CB ARG A 2 184.596 249.350 230.322 1.00 43.84 ATOM 14 CG ARG A 2 183.865 249.984 231.492 1.00 43.73 ATOM 15 CD ARG A 2 184.446 249.686 232.853 1.00 43.52 ATOM 16 NE ARG A 2 184.219 248.336 233.339 1.00 43.16 ATOM 17 CZ ARG A 2 184.339 247.949 234.609 1.00 42.71 ATOM 18 NH1 ARG A 2 184.104 246.687 234.928 1.00 44.35 ATOM 19 NH2 ARG A 2 184.689 248.806 235.558 1.00 41.33 ATOM 20 N ALA A 3 185.365 252.541 229.497 1.00 43.15 ATOM 21 CA ALA A 3 186.275 253.712 229.545 1.00 42.78 ATOM 22 C ALA A 3 187.507 253.414 230.411 1.00 40.29 ATOM 23 O ALA A 3 188.580 253.968 230.115 1.00 40.66 ATOM 24 CB ALA A 3 185.519 254.921 230.045 1.00 44.00 ATOM 25 N LYS A 4 187.346 252.580 231.439 1.00 39.23 ATOM 26 CA LYS A 4 188.415 252.118 232.366 1.00 39.66 ATOM 27 C LYS A 4 189.381 251.163 231.656 1.00 39.35 ATOM 28 O LYS A 4 190.590 251.245 231.926 1.00 38.90 ATOM 29 CB LYS A 4 187.757 251.400 233.543 1.00 40.21 ATOM 30 CG LYS A 4 188.662 250.990 234.686 1.00 40.29 ATOM 31 CD LYS A 4 187.875 250.365 235.807 1.00 40.30 ATOM 32 CE LYS A 4 188.770 249.957 236.949 1.00 40.85 ATOM 33 NZ LYS A 4 188.031 249.227 238.004 1.00 41.14 ATOM 34 N TRP A 5 188.852 250.258 230.828 1.00 40.56 ATOM 35 CA TRP A 5 189.636 249.261 230.051 1.00 41.12 ATOM 36 C TRP A 5 190.233 249.917 228.801 1.00 43.17 ATOM 37 O TRP A 5 191.285 249.432 228.345 1.00 44.17 ATOM 38 CB TRP A 5 188.784 248.039 229.688 1.00 39.70 ATOM 39 CG TRP A 5 188.094 247.352 230.830 1.00 39.18 ATOM 40 CD1 TRP A 5 186.854 246.785 230.788 1.00 38.76 ATOM 41 CD2 TRP A 5 188.575 247.154 232.175 1.00 38.62 ATOM 42 NE1 TRP A 5 186.526 246.252 232.004 1.00 38.90 ATOM 43 CE2 TRP A 5 187.562 246.459 232.874 1.00 38.51 ATOM 44 CE3 TRP A 5 189.749 247.488 232.862 1.00 38.30 ATOM 45 CZ2 TRP A 5 187.687 246.100 234.215 1.00 38.27 ATOM 46 CZ3 TRP A 5 189.871 247.135 234.188 1.00 39.03 ATOM 47 CH2 TRP A 5 188.851 246.455 234.855 1.00 38.66 ATOM 48 N ARG A 6 189.582 250.955 228.260 1.00 46.14 ATOM 49 CA ARG A 6 190.146 251.840 227.204 1.00 48.10 ATOM 50 C ARG A 6 191.391 252.527 227.772 1.00 46.30 ATOM 51 O ARG A 6 192.401 252.595 227.052 1.00 46.92 ATOM 52 CB ARG A 6 189.115 252.876 226.734 1.00 53.33 ATOM 53 CG ARG A 6 189.594 253.819 225.635 1.00 59.17 ATOM 54 CD ARG A 6 189.992 253.150 224.325 1.00 63.76 ATOM 55 NE ARG A 6 188.861 252.533 223.637 1.00 66.71 ATOM 56 CZ ARG A 6 187.917 253.180 222.950 1.00 67.82 ATOM 57 NH1 ARG A 6 187.937 254.500 222.838 1.00 68.15 ATOM 58 NH2 ARG A 6 186.943 252.492 222.374 1.00 68.03 ATOM 59 N LYS A 7 191.304 253.005 229.018 1.00 45.70 ATOM 60 CA LYS A 7 192.401 253.691 229.755 1.00 46.37 ATOM 61 C LYS A 7 193.535 252.703 230.057 1.00 46.96 ATOM 62 O LYS A 7 194.700 253.138 230.045 1.00 47.25 ATOM 63 CB LYS A 7 191.867 254.307 231.053 1.00 46.55 ATOM 64 CG LYS A 7 192.875 255.116 231.856 1.00 46.38 ATOM 65 CD LYS A 7 192.282 255.781 233.073 1.00 46.53 ATOM 66 CE LYS A 7 193.320 256.539 233.872 1.00 47.47 ATOM 67 NZ LYS A 7 192.759 257.099 235.124 1.00 47.70 ATOM 68 N LYS A 8 193.204 251.440 230.343 1.00 49.32 ATOM 69 CA LYS A 8 194.186 250.371 230.680 1.00 50.90 ATOM 70 C LYS A 8 194.941 249.928 229.420 1.00 50.94 ATOM 71 O LYS A 8 196.102 249.500 229.563 1.00 51.42 ATOM 72 CB LYS A 8 193.487 249.176 231.333 1.00 51.51 ATOM 73 CG LYS A 8 194.423 248.186 232.010 1.00 51.35 ATOM 74 CD LYS A 8 193.695 247.099 232.759 1.00 51.75 ATOM 75 CE LYS A 8 194.636 246.156 233.472 1.00 51.53 ATOM 76 NZ LYS A 8 195.208 246.770 234.694 1.00 52.14 ATOM 77 N ARG A 9 194.310 250.003 228.244 1.00 51.58 ATOM 78 CA ARG A 9 194.964 249.707 226.941 1.00 53.90 ATOM 79 C ARG A 9 196.032 250.770 226.660 1.00 55.81 ATOM 80 O ARG A 9 197.126 250.377 226.222 1.00 58.03 ATOM 81 CB ARG A 9 193.942 249.603 225.802 1.00 54.25 ATOM 82 CG ARG A 9 193.315 248.221 225.693 1.00 55.68 ATOM 83 CD ARG A 9 192.307 248.081 224.572 1.00 56.71 ATOM 84 NE ARG A 9 192.896 248.225 223.249 1.00 57.07 ATOM 85 CZ ARG A 9 192.256 248.025 222.097 1.00 58.31 ATOM 86 NH1 ARG A 9 192.901 248.188 220.953 1.00 60.43 ATOM 87 NH2 ARG A 9 190.982 247.668 222.077 1.00 57.02 ATOM 88 N MET A 10 195.733 252.050 226.919 1.00 57.41 ATOM 89 CA MET A 10 196.681 253.185 226.735 1.00 59.07 ATOM 90 C MET A 10 197.891 253.005 227.659 1.00 57.90 ATOM 91 O MET A 10 199.023 253.185 227.180 1.00 60.88 ATOM 92 CB MET A 10 196.034 254.541 227.040 1.00 63.18 ATOM 93 CG MET A 10 194.872 254.918 226.129 1.00 66.84 ATOM 94 SD MET A 10 195.200 254.729 224.357 1.00 73.17 ATOM 95 CE MET A 10 196.762 255.593 224.206 1.00 71.43 ATOM 96 N ARG A 11 197.664 252.646 228.924 1.00 56.62 ATOM 97 CA ARG A 11 198.734 252.529 229.951 1.00 56.72 ATOM 98 C ARG A 11 199.603 251.289 229.714 1.00 57.52 ATOM 99 O ARG A 11 200.656 251.213 230.364 1.00 60.15 ATOM 100 CB ARG A 11 198.137 252.482 231.357 1.00 57.47 ATOM 101 CG ARG A 11 197.602 253.821 231.836 1.00 58.43 ATOM 102 CD ARG A 11 197.007 253.665 233.214 1.00 58.67 ATOM 103 NE ARG A 11 196.773 254.952 233.844 1.00 59.27 ATOM 104 CZ ARG A 11 196.588 255.143 235.147 1.00 60.94 ATOM 105 NH1 ARG A 11 196.603 254.127 235.996 1.00 61.75 ATOM 106 NH2 ARG A 11 196.386 256.368 235.600 1.00 62.12 ATOM 107 N ARG A 12 199.171 250.342 228.874 1.00 57.42 ATOM 108 CA ARG A 12 200.000 249.187 228.427 1.00 57.49 ATOM 109 C ARG A 12 200.744 249.553 227.141 1.00 55.19 ATOM 110 O ARG A 12 201.829 248.985 226.912 1.00 55.34 ATOM 111 CB ARG A 12 199.141 247.935 228.230 1.00 59.96 ATOM 112 CG ARG A 12 198.776 247.254 229.539 1.00 62.45 ATOM 113 CD ARG A 12 197.975 245.985 229.345 1.00 64.05 ATOM 114 NE ARG A 12 197.708 245.360 230.631 1.00 65.92 ATOM 115 CZ ARG A 12 196.963 244.274 230.819 1.00 67.47 ATOM 116 NH1 ARG A 12 196.387 243.659 229.798 1.00 67.97 ATOM 117 NH2 ARG A 12 196.800 243.802 232.043 1.00 67.71 ATOM 118 N LEU A 13 200.182 250.466 226.346 1.00 55.33 ATOM 119 CA LEU A 13 200.708 250.863 225.014 1.00 56.73 ATOM 120 C LEU A 13 201.695 252.024 225.185 1.00 56.40 ATOM 121 O LEU A 13 202.735 252.007 224.501 1.00 58.38 ATOM 122 CB LEU A 13 199.523 251.219 224.107 1.00 57.60 ATOM 123 CG LEU A 13 199.730 251.053 222.602 1.00 60.08 ATOM 124 CD1 LEU A 13 200.405 252.275 222.007 1.00 60.24 ATOM 125 CD2 LEU A 13 200.507 249.782 222.267 1.00 62.85 ATOM 126 N LYS A 14 201.391 252.976 226.073 1.00 56.52 ATOM 127 CA LYS A 14 202.339 254.025 226.544 1.00 58.06 ATOM 128 C LYS A 14 203.563 253.364 227.192 1.00 59.23 ATOM 129 O LYS A 14 204.679 253.889 227.021 1.00 60.27 ATOM 130 CB LYS A 14 201.677 254.951 227.568 1.00 59.28 ATOM 131 CG LYS A 14 200.686 255.958 227.006 1.00 61.21 ATOM 132 CD LYS A 14 199.859 256.638 228.078 1.00 63.22 ATOM 133 CE LYS A 14 200.663 257.579 228.950 1.00 64.01 ATOM 134 NZ LYS A 14 199.811 258.229 229.973 1.00 64.29 ATOM 135 N ARG A 15 203.339 252.265 227.919 1.00 61.63 ATOM 136 CA ARG A 15 204.361 251.493 228.680 1.00 62.65 ATOM 137 C ARG A 15 205.329 250.809 227.705 1.00 60.42 ATOM 138 O ARG A 15 206.525 250.727 228.039 1.00 58.69 ATOM 139 CB ARG A 15 203.643 250.486 229.584 1.00 66.54 ATOM 140 CG ARG A 15 204.445 249.960 230.764 1.00 71.56 ATOM 141 CD ARG A 15 203.526 249.154 231.666 1.00 76.35 ATOM 142 NE ARG A 15 204.154 248.706 232.904 1.00 81.70 ATOM 143 CZ ARG A 15 203.561 247.961 233.842 1.00 85.00 ATOM 144 NH1 ARG A 15 204.233 247.615 234.930 1.00 84.51 ATOM 145 NH2 ARG A 15 202.307 247.560 233.696 1.00 85.63 ATOM 146 N LYS A 16 204.832 250.345 226.551 1.00 60.98 ATOM 147 CA LYS A 16 205.646 249.702 225.481 1.00 62.40 ATOM 148 C LYS A 16 206.296 250.768 224.585 1.00 59.57 ATOM 149 O LYS A 16 207.325 250.454 223.977 1.00 59.56 ATOM 150 CB LYS A 16 204.799 248.740 224.640 1.00 66.52 ATOM 151 CG LYS A 16 205.606 247.739 223.817 1.00 71.54 ATOM 152 CD LYS A 16 204.773 246.857 222.905 1.00 75.92 ATOM 153 CE LYS A 16 204.024 245.758 223.633 1.00 78.10 ATOM 154 NZ LYS A 16 204.929 244.697 224.137 1.00 78.47 ATOM 155 N ARG A 17 205.718 251.969 224.484 1.00 58.07 ATOM 156 CA ARG A 17 206.303 253.099 223.709 1.00 56.84 ATOM 157 C ARG A 17 207.573 253.598 224.407 1.00 57.09 ATOM 158 O ARG A 17 208.575 253.825 223.702 1.00 57.32 ATOM 159 CB ARG A 17 205.296 254.239 223.540 1.00 55.90 ATOM 160 CG ARG A 17 204.315 254.032 222.398 1.00 55.59 ATOM 161 CD ARG A 17 203.131 254.961 222.544 1.00 56.03 ATOM 162 NE ARG A 17 202.234 254.906 221.401 1.00 56.48 ATOM 163 CZ ARG A 17 201.012 255.437 221.359 1.00 58.70 ATOM 164 NH1 ARG A 17 200.504 256.062 222.412 1.00 59.20 ATOM 165 NH2 ARG A 17 200.286 255.320 220.258 1.00 60.14 ATOM 166 N ARG A 18 207.517 253.782 225.731 1.00 58.15 ATOM 167 CA ARG A 18 208.684 254.125 226.590 1.00 59.75 ATOM 168 C ARG A 18 209.762 253.045 226.447 1.00 60.27 ATOM 169 O ARG A 18 210.954 253.409 226.406 1.00 60.30 ATOM 170 CB ARG A 18 208.273 254.254 228.060 1.00 62.45 ATOM 171 CG ARG A 18 207.565 255.556 228.403 1.00 65.37 ATOM 172 CD ARG A 18 207.342 255.681 229.899 1.00 67.48 ATOM 173 NE ARG A 18 206.422 254.667 230.404 1.00 69.32 ATOM 174 CZ ARG A 18 206.128 254.463 231.688 1.00 71.38 ATOM 175 NH1 ARG A 18 206.681 255.204 232.637 1.00 73.46 ATOM 176 NH2 ARG A 18 205.273 253.511 232.023 1.00 72.18 ATOM 177 N LYS A 19 209.347 251.774 226.385 1.00 61.86 ATOM 178 CA LYS A 19 210.233 250.589 226.214 1.00 63.04 ATOM 179 C LYS A 19 211.070 250.761 224.940 1.00 61.00 ATOM 180 O LYS A 19 212.302 250.645 225.040 1.00 61.52 ATOM 181 CB LYS A 19 209.400 249.302 226.165 1.00 67.37 ATOM 182 CG LYS A 19 210.169 248.003 226.359 1.00 71.49 ATOM 183 CD LYS A 19 210.561 247.737 227.799 1.00 74.95 ATOM 184 CE LYS A 19 211.364 246.462 227.968 1.00 76.44 ATOM 185 NZ LYS A 19 210.592 245.262 227.566 1.00 76.21 ATOM 186 N MET A 20 210.424 251.060 223.806 1.00 62.06 ATOM 187 CA MET A 20 211.069 251.209 222.469 1.00 63.30 ATOM 188 C MET A 20 211.980 252.443 222.453 1.00 59.33 ATOM 189 O MET A 20 213.042 252.377 221.810 1.00 58.85 ATOM 190 CB MET A 20 210.036 251.360 221.344 1.00 68.58 ATOM 191 CG MET A 20 209.089 250.181 221.188 1.00 73.62 ATOM 192 SD MET A 20 209.915 248.605 220.848 1.00 80.93 ATOM 193 CE MET A 20 208.574 247.461 221.175 1.00 81.56 ATOM 194 N ARG A 21 211.573 253.531 223.111 1.00 57.11 ATOM 195 CA ARG A 21 212.318 254.818 223.116 1.00 57.06 ATOM 196 C ARG A 21 213.532 254.745 224.053 1.00 60.07 ATOM 197 O ARG A 21 214.414 255.609 223.902 1.00 62.70 ATOM 198 CB ARG A 21 211.400 255.979 223.507 1.00 56.10 ATOM 199 CG ARG A 21 210.469 256.432 222.392 1.00 54.11 ATOM 200 CD ARG A 21 209.575 257.572 222.836 1.00 52.53 ATOM 201 NE ARG A 21 210.335 258.744 223.257 1.00 51.25 ATOM 202 CZ ARG A 21 210.923 259.623 222.446 1.00 50.31 ATOM 203 NH1 ARG A 21 210.857 259.492 221.132 1.00 51.29 ATOM 204 NH2 ARG A 21 211.586 260.648 222.956 1.00 50.35 ATOM 205 N GLN A 22 213.581 253.783 224.985 1.00 61.94 ATOM 206 CA GLN A 22 214.791 253.494 225.808 1.00 63.08 ATOM 207 C GLN A 22 215.807 252.737 224.942 1.00 62.78 ATOM 208 O GLN A 22 217.016 252.977 225.122 1.00 64.69 ATOM 209 CB GLN A 22 214.430 252.721 227.082 1.00 65.86 ATOM 210 CG GLN A 22 215.518 252.736 228.157 1.00 68.81 ATOM 211 CD GLN A 22 216.239 251.415 228.331 1.00 74.10 ATOM 212 OE1 GLN A 22 215.622 250.373 228.549 1.00 75.17 ATOM 213 NE2 GLN A 22 217.562 251.450 228.265 1.00 73.97 ATOM 214 N ARG A 23 215.336 251.880 224.026 1.00 63.36 ATOM 215 CA ARG A 23 216.185 251.033 223.140 1.00 65.25 ATOM 216 C ARG A 23 216.934 251.883 222.103 1.00 67.66 ATOM 217 O ARG A 23 217.968 251.396 221.601 1.00 67.85 ATOM 218 CB ARG A 23 215.341 249.972 222.426 1.00 64.76 ATOM 219 CG ARG A 23 214.763 248.913 223.354 1.00 66.42 ATOM 220 CD ARG A 23 214.217 247.712 222.606 1.00 67.50 ATOM 221 NE ARG A 23 215.266 247.012 221.871 1.00 68.49 ATOM 222 CZ ARG A 23 215.080 245.976 221.055 1.00 69.36 ATOM 223 NH1 ARG A 23 216.120 245.431 220.444 1.00 67.59 ATOM 224 NH2 ARG A 23 213.867 245.486 220.847 1.00 71.32 ATOM 225 N SER A 24 216.439 253.087 221.787 1.00 70.22 ATOM 226 CA SER A 24 216.953 253.976 220.709 1.00 72.24 ATOM 227 C SER A 24 217.845 255.097 221.263 1.00 75.27 ATOM 228 O SER A 24 218.486 255.777 220.436 1.00 76.05 ATOM 229 CB SER A 24 215.810 254.545 219.915 1.00 72.42 ATOM 230 OG SER A 24 214.926 253.514 219.501 1.00 73.53 ATOM 231 N LYS A 25 217.889 255.287 222.589 1.00 79.76 ATOM 232 CA LYS A 25 218.685 256.350 223.268 1.00 85.21 ATOM 233 C LYS A 25 219.992 255.748 223.799 1.00 87.18 ATOM 234 O LYS A 25 221.010 256.436 223.917 1.00 85.59 ATOM 235 CB LYS A 25 217.870 256.992 224.396 1.00 88.47 ATOM 236 CG LYS A 25 216.745 257.909 223.933 1.00 92.62 ATOM 237 CD LYS A 25 215.873 258.417 225.061 1.00 95.55 ATOM 238 CE LYS A 25 214.675 259.207 224.577 1.00 96.54 ATOM 239 NZ LYS A 25 213.829 259.661 225.707 1.00 96.83 TER