HEADER RIBOSOME 31-DEC-69 6P5J TITLE Structure of a mammalian 80S ribosome in complex with the Israeli TITLE 2 Acute Paralysis Virus IRES (Class 2) COMPND MOL_ID: 77; COMPND 2 MOLECULE: eL41; COMPND 3 CHAIN: An; EXPDTA ELECTRON MICROSCOPY DBREF 6P5J A 1 25 UNP A0A087WN A0A087WNH4_ 1 25 SEQRES 1 An 25 MET ARG ALA LYS TRP ARG LYS LYS ARG MET ARG ARG LEU SEQRES 2 An 25 LYS ARG LYS ARG ARG LYS MET ARG GLN ARG SER LYS ATOM 1 N MET A 1 183.644 249.166 225.717 1.00 72.71 ATOM 2 CA MET A 1 184.797 249.303 226.642 1.00 72.59 ATOM 3 C MET A 1 184.408 250.235 227.795 1.00 71.73 ATOM 4 O MET A 1 183.855 251.320 227.518 1.00 71.61 ATOM 5 CB MET A 1 186.022 249.863 225.910 1.00 73.23 ATOM 6 CG MET A 1 187.191 250.196 226.816 1.00 74.10 ATOM 7 SD MET A 1 187.920 248.751 227.621 1.00 75.16 ATOM 8 CE MET A 1 188.805 248.033 226.239 1.00 75.05 ATOM 9 N ARG A 2 184.702 249.825 229.032 1.00 70.86 ATOM 10 CA ARG A 2 184.487 250.640 230.255 1.00 70.50 ATOM 11 C ARG A 2 185.584 251.710 230.318 1.00 69.98 ATOM 12 O ARG A 2 186.756 251.366 230.058 1.00 69.64 ATOM 13 CB ARG A 2 184.495 249.756 231.506 1.00 70.39 ATOM 14 CG ARG A 2 183.883 250.424 232.729 1.00 70.52 ATOM 15 CD ARG A 2 184.415 249.905 234.050 1.00 70.37 ATOM 16 NE ARG A 2 183.812 248.656 234.498 1.00 70.17 ATOM 17 CZ ARG A 2 183.995 248.106 235.700 1.00 69.91 ATOM 18 NH1 ARG A 2 183.395 246.965 236.000 1.00 70.35 ATOM 19 NH2 ARG A 2 184.770 248.689 236.601 1.00 69.54 ATOM 20 N ALA A 3 185.214 252.947 230.669 1.00 69.34 ATOM 21 CA ALA A 3 186.105 254.134 230.734 1.00 69.19 ATOM 22 C ALA A 3 187.267 253.899 231.712 1.00 69.54 ATOM 23 O ALA A 3 188.312 254.560 231.549 1.00 70.18 ATOM 24 CB ALA A 3 185.307 255.359 231.113 1.00 69.26 ATOM 25 N LYS A 4 187.086 253.002 232.688 1.00 69.11 ATOM 26 CA LYS A 4 188.127 252.566 233.660 1.00 68.43 ATOM 27 C LYS A 4 189.140 251.643 232.974 1.00 68.31 ATOM 28 O LYS A 4 190.351 251.842 233.188 1.00 67.83 ATOM 29 CB LYS A 4 187.462 251.837 234.828 1.00 68.48 ATOM 30 CG LYS A 4 188.329 251.610 236.054 1.00 68.73 ATOM 31 CD LYS A 4 187.525 251.073 237.210 1.00 68.84 ATOM 32 CE LYS A 4 188.383 250.649 238.376 1.00 68.98 ATOM 33 NZ LYS A 4 187.575 250.106 239.492 1.00 69.07 ATOM 34 N TRP A 5 188.661 250.659 232.203 1.00 69.34 ATOM 35 CA TRP A 5 189.510 249.640 231.526 1.00 69.92 ATOM 36 C TRP A 5 190.086 250.189 230.215 1.00 70.75 ATOM 37 O TRP A 5 191.090 249.617 229.754 1.00 70.86 ATOM 38 CB TRP A 5 188.750 248.328 231.296 1.00 69.25 ATOM 39 CG TRP A 5 188.121 247.726 232.518 1.00 68.64 ATOM 40 CD1 TRP A 5 186.891 247.139 232.580 1.00 68.53 ATOM 41 CD2 TRP A 5 188.666 247.651 233.850 1.00 68.36 ATOM 42 NE1 TRP A 5 186.631 246.701 233.849 1.00 68.20 ATOM 43 CE2 TRP A 5 187.699 247.000 234.651 1.00 68.16 ATOM 44 CE3 TRP A 5 189.864 248.061 234.453 1.00 68.51 ATOM 45 CZ2 TRP A 5 187.896 246.756 236.010 1.00 68.42 ATOM 46 CZ3 TRP A 5 190.057 247.821 235.796 1.00 68.66 ATOM 47 CH2 TRP A 5 189.085 247.177 236.562 1.00 68.48 ATOM 48 N ARG A 6 189.494 251.240 229.632 1.00 71.34 ATOM 49 CA ARG A 6 190.142 252.021 228.541 1.00 72.12 ATOM 50 C ARG A 6 191.354 252.746 229.137 1.00 72.72 ATOM 51 O ARG A 6 192.444 252.645 228.545 1.00 72.32 ATOM 52 CB ARG A 6 189.178 253.012 227.877 1.00 72.91 ATOM 53 CG ARG A 6 189.775 253.822 226.729 1.00 73.88 ATOM 54 CD ARG A 6 190.510 253.023 225.660 1.00 74.75 ATOM 55 NE ARG A 6 189.632 252.146 224.892 1.00 75.23 ATOM 56 CZ ARG A 6 188.955 252.480 223.789 1.00 75.82 ATOM 57 NH1 ARG A 6 189.027 253.699 223.277 1.00 76.19 ATOM 58 NH2 ARG A 6 188.192 251.575 223.196 1.00 75.95 ATOM 59 N LYS A 7 191.161 253.415 230.281 1.00 73.81 ATOM 60 CA LYS A 7 192.214 254.155 231.034 1.00 74.62 ATOM 61 C LYS A 7 193.349 253.202 231.437 1.00 74.91 ATOM 62 O LYS A 7 194.511 253.652 231.417 1.00 75.51 ATOM 63 CB LYS A 7 191.616 254.847 232.265 1.00 75.10 ATOM 64 CG LYS A 7 192.581 255.726 233.051 1.00 75.41 ATOM 65 CD LYS A 7 191.904 256.584 234.097 1.00 75.91 ATOM 66 CE LYS A 7 192.876 257.456 234.864 1.00 76.18 ATOM 67 NZ LYS A 7 192.175 258.374 235.793 1.00 76.36 ATOM 68 N LYS A 8 193.035 251.948 231.787 1.00 75.29 ATOM 69 CA LYS A 8 194.038 250.923 232.195 1.00 75.70 ATOM 70 C LYS A 8 194.839 250.450 230.975 1.00 75.83 ATOM 71 O LYS A 8 196.055 250.230 231.129 1.00 75.35 ATOM 72 CB LYS A 8 193.375 249.729 232.888 1.00 76.22 ATOM 73 CG LYS A 8 194.358 248.731 233.487 1.00 76.62 ATOM 74 CD LYS A 8 193.783 247.877 234.596 1.00 76.61 ATOM 75 CE LYS A 8 194.775 246.865 235.132 1.00 76.92 ATOM 76 NZ LYS A 8 195.990 247.507 235.688 1.00 77.46 ATOM 77 N ARG A 9 194.187 250.285 229.819 1.00 76.79 ATOM 78 CA ARG A 9 194.827 249.823 228.555 1.00 77.24 ATOM 79 C ARG A 9 195.734 250.922 227.985 1.00 76.82 ATOM 80 O ARG A 9 196.779 250.567 227.404 1.00 76.54 ATOM 81 CB ARG A 9 193.773 249.402 227.528 1.00 77.90 ATOM 82 CG ARG A 9 193.163 248.034 227.793 1.00 78.85 ATOM 83 CD ARG A 9 192.331 247.594 226.608 1.00 79.44 ATOM 84 NE ARG A 9 193.197 247.375 225.455 1.00 79.90 ATOM 85 CZ ARG A 9 192.840 247.460 224.173 1.00 80.15 ATOM 86 NH1 ARG A 9 193.753 247.247 223.238 1.00 80.29 ATOM 87 NH2 ARG A 9 191.599 247.754 223.817 1.00 79.92 ATOM 88 N MET A 10 195.344 252.195 228.126 1.00 76.97 ATOM 89 CA MET A 10 196.180 253.370 227.754 1.00 76.99 ATOM 90 C MET A 10 197.420 253.430 228.659 1.00 75.85 ATOM 91 O MET A 10 198.469 253.888 228.171 1.00 76.20 ATOM 92 CB MET A 10 195.400 254.686 227.871 1.00 78.06 ATOM 93 CG MET A 10 194.264 254.844 226.864 1.00 78.92 ATOM 94 SD MET A 10 194.738 254.577 225.133 1.00 80.63 ATOM 95 CE MET A 10 195.956 255.872 224.914 1.00 80.21 ATOM 96 N ARG A 11 197.309 252.976 229.914 1.00 74.52 ATOM 97 CA ARG A 11 198.414 252.989 230.915 1.00 74.47 ATOM 98 C ARG A 11 199.430 251.884 230.604 1.00 75.09 ATOM 99 O ARG A 11 200.626 252.215 230.503 1.00 75.47 ATOM 100 CB ARG A 11 197.872 252.849 232.341 1.00 74.13 ATOM 101 CG ARG A 11 197.432 254.167 232.953 1.00 73.84 ATOM 102 CD ARG A 11 196.831 253.970 234.326 1.00 73.48 ATOM 103 NE ARG A 11 196.623 255.244 234.994 1.00 73.18 ATOM 104 CZ ARG A 11 196.083 255.397 236.199 1.00 73.28 ATOM 105 NH1 ARG A 11 195.680 254.345 236.898 1.00 73.32 ATOM 106 NH2 ARG A 11 195.949 256.614 236.698 1.00 73.76 ATOM 107 N ARG A 12 198.976 250.631 230.464 1.00 75.65 ATOM 108 CA ARG A 12 199.821 249.455 230.101 1.00 75.77 ATOM 109 C ARG A 12 200.674 249.783 228.867 1.00 75.39 ATOM 110 O ARG A 12 201.834 249.331 228.814 1.00 75.73 ATOM 111 CB ARG A 12 198.970 248.225 229.770 1.00 76.74 ATOM 112 CG ARG A 12 198.259 247.576 230.950 1.00 77.74 ATOM 113 CD ARG A 12 197.343 246.482 230.432 1.00 78.80 ATOM 114 NE ARG A 12 196.504 245.850 231.444 1.00 79.78 ATOM 115 CZ ARG A 12 195.532 244.970 231.189 1.00 80.50 ATOM 116 NH1 ARG A 12 195.255 244.604 229.946 1.00 80.78 ATOM 117 NH2 ARG A 12 194.829 244.455 232.184 1.00 80.76 ATOM 118 N LEU A 13 200.099 250.522 227.912 1.00 75.54 ATOM 119 CA LEU A 13 200.720 250.884 226.610 1.00 76.01 ATOM 120 C LEU A 13 201.647 252.099 226.778 1.00 76.30 ATOM 121 O LEU A 13 202.634 252.184 226.023 1.00 76.98 ATOM 122 CB LEU A 13 199.589 251.145 225.606 1.00 76.30 ATOM 123 CG LEU A 13 199.957 251.245 224.122 1.00 77.04 ATOM 124 CD1 LEU A 13 200.209 252.686 223.709 1.00 77.24 ATOM 125 CD2 LEU A 13 201.142 250.362 223.752 1.00 77.37 ATOM 126 N LYS A 14 201.361 252.999 227.727 1.00 76.62 ATOM 127 CA LYS A 14 202.275 254.117 228.106 1.00 76.91 ATOM 128 C LYS A 14 203.543 253.544 228.757 1.00 77.71 ATOM 129 O LYS A 14 204.630 254.083 228.480 1.00 78.33 ATOM 130 CB LYS A 14 201.584 255.128 229.027 1.00 76.91 ATOM 131 CG LYS A 14 200.719 256.161 228.318 1.00 77.25 ATOM 132 CD LYS A 14 199.798 256.922 229.247 1.00 77.30 ATOM 133 CE LYS A 14 200.528 257.923 230.118 1.00 77.63 ATOM 134 NZ LYS A 14 199.633 258.524 231.134 1.00 77.54 ATOM 135 N ARG A 15 203.406 252.495 229.581 1.00 78.84 ATOM 136 CA ARG A 15 204.542 251.736 230.181 1.00 79.54 ATOM 137 C ARG A 15 205.372 251.083 229.064 1.00 79.63 ATOM 138 O ARG A 15 206.605 250.991 229.226 1.00 79.98 ATOM 139 CB ARG A 15 204.048 250.670 231.168 1.00 80.63 ATOM 140 CG ARG A 15 203.313 251.217 232.385 1.00 81.92 ATOM 141 CD ARG A 15 203.086 250.174 233.464 1.00 82.90 ATOM 142 NE ARG A 15 204.313 249.822 234.172 1.00 83.85 ATOM 143 CZ ARG A 15 204.382 249.082 235.281 1.00 84.50 ATOM 144 NH1 ARG A 15 205.562 248.832 235.828 1.00 84.54 ATOM 145 NH2 ARG A 15 203.288 248.594 235.846 1.00 84.68 ATOM 146 N LYS A 16 204.714 250.649 227.981 1.00 78.89 ATOM 147 CA LYS A 16 205.338 250.009 226.788 1.00 78.31 ATOM 148 C LYS A 16 206.021 251.071 225.915 1.00 77.80 ATOM 149 O LYS A 16 207.170 250.825 225.495 1.00 77.78 ATOM 150 CB LYS A 16 204.278 249.240 225.992 1.00 78.70 ATOM 151 CG LYS A 16 204.813 248.313 224.908 1.00 79.52 ATOM 152 CD LYS A 16 203.726 247.614 224.108 1.00 80.24 ATOM 153 CE LYS A 16 202.917 246.610 224.904 1.00 80.82 ATOM 154 NZ LYS A 16 203.740 245.465 225.360 1.00 81.33 ATOM 155 N ARG A 17 205.335 252.189 225.638 1.00 77.65 ATOM 156 CA ARG A 17 205.849 253.328 224.820 1.00 77.23 ATOM 157 C ARG A 17 207.120 253.905 225.459 1.00 78.28 ATOM 158 O ARG A 17 208.033 254.283 224.698 1.00 78.49 ATOM 159 CB ARG A 17 204.790 254.426 224.661 1.00 76.44 ATOM 160 CG ARG A 17 203.782 254.172 223.549 1.00 76.06 ATOM 161 CD ARG A 17 202.679 255.214 223.551 1.00 75.83 ATOM 162 NE ARG A 17 201.766 255.080 222.421 1.00 75.44 ATOM 163 CZ ARG A 17 200.599 255.716 222.289 1.00 75.14 ATOM 164 NH1 ARG A 17 200.167 256.550 223.224 1.00 75.20 ATOM 165 NH2 ARG A 17 199.858 255.507 221.213 1.00 75.21 ATOM 166 N ARG A 18 207.165 253.979 226.794 1.00 79.77 ATOM 167 CA ARG A 18 208.348 254.440 227.575 1.00 81.42 ATOM 168 C ARG A 18 209.501 253.438 227.432 1.00 84.16 ATOM 169 O ARG A 18 210.658 253.898 227.346 1.00 84.99 ATOM 170 CB ARG A 18 207.999 254.633 229.055 1.00 80.98 ATOM 171 CG ARG A 18 207.278 255.939 229.358 1.00 80.83 ATOM 172 CD ARG A 18 207.161 256.185 230.850 1.00 80.59 ATOM 173 NE ARG A 18 206.396 255.146 231.531 1.00 80.31 ATOM 174 CZ ARG A 18 206.246 255.039 232.851 1.00 80.40 ATOM 175 NH1 ARG A 18 206.810 255.910 233.674 1.00 80.77 ATOM 176 NH2 ARG A 18 205.526 254.047 233.347 1.00 80.22 ATOM 177 N LYS A 19 209.206 252.132 227.413 1.00 86.99 ATOM 178 CA LYS A 19 210.224 251.050 227.296 1.00 89.31 ATOM 179 C LYS A 19 210.878 251.086 225.906 1.00 90.30 ATOM 180 O LYS A 19 212.057 250.694 225.817 1.00 90.31 ATOM 181 CB LYS A 19 209.610 249.673 227.582 1.00 90.89 ATOM 182 CG LYS A 19 210.608 248.541 227.806 1.00 91.85 ATOM 183 CD LYS A 19 211.488 248.719 229.033 1.00 92.57 ATOM 184 CE LYS A 19 212.540 247.639 229.178 1.00 93.02 ATOM 185 NZ LYS A 19 211.944 246.326 229.518 1.00 93.36 ATOM 186 N MET A 20 210.156 251.546 224.875 1.00 91.45 ATOM 187 CA MET A 20 210.672 251.703 223.484 1.00 92.38 ATOM 188 C MET A 20 211.212 253.129 223.262 1.00 91.78 ATOM 189 O MET A 20 211.447 253.490 222.089 1.00 91.85 ATOM 190 CB MET A 20 209.576 251.369 222.463 1.00 93.70 ATOM 191 CG MET A 20 209.158 249.905 222.492 1.00 95.16 ATOM 192 SD MET A 20 210.489 248.780 221.980 1.00 97.71 ATOM 193 CE MET A 20 210.095 247.319 222.941 1.00 97.23 ATOM 194 N ARG A 21 211.409 253.902 224.339 1.00 91.16 ATOM 195 CA ARG A 21 212.225 255.150 224.372 1.00 91.08 ATOM 196 C ARG A 21 213.398 255.019 225.360 1.00 90.89 ATOM 197 O ARG A 21 214.307 255.871 225.290 1.00 90.22 ATOM 198 CB ARG A 21 211.343 256.345 224.750 1.00 90.74 ATOM 199 CG ARG A 21 210.421 256.811 223.633 1.00 90.32 ATOM 200 CD ARG A 21 209.402 257.823 224.117 1.00 90.05 ATOM 201 NE ARG A 21 210.021 259.014 224.692 1.00 89.61 ATOM 202 CZ ARG A 21 210.541 260.035 224.006 1.00 89.11 ATOM 203 NH1 ARG A 21 210.537 260.045 222.681 1.00 88.99 ATOM 204 NH2 ARG A 21 211.073 261.055 224.658 1.00 89.13 ATOM 205 N GLN A 22 213.391 254.005 226.237 1.00 91.81 ATOM 206 CA GLN A 22 214.392 253.811 227.324 1.00 93.25 ATOM 207 C GLN A 22 215.668 253.169 226.759 1.00 93.38 ATOM 208 O GLN A 22 216.751 253.434 227.320 1.00 93.60 ATOM 209 CB GLN A 22 213.787 252.960 228.445 1.00 94.34 ATOM 210 CG GLN A 22 214.663 252.844 229.690 1.00 95.14 ATOM 211 CD GLN A 22 215.603 251.661 229.689 1.00 95.86 ATOM 212 OE1 GLN A 22 215.324 250.610 229.114 1.00 95.92 ATOM 213 NE2 GLN A 22 216.737 251.822 230.352 1.00 96.28 ATOM 214 N ARG A 23 215.548 252.373 225.689 1.00 92.67 ATOM 215 CA ARG A 23 216.654 251.564 225.102 1.00 92.17 ATOM 216 C ARG A 23 217.662 252.458 224.360 1.00 92.18 ATOM 217 O ARG A 23 218.747 251.940 224.025 1.00 92.03 ATOM 218 CB ARG A 23 216.084 250.485 224.175 1.00 91.63 ATOM 219 CG ARG A 23 215.209 249.464 224.888 1.00 91.56 ATOM 220 CD ARG A 23 214.691 248.382 223.961 1.00 91.41 ATOM 221 NE ARG A 23 215.772 247.556 223.437 1.00 91.55 ATOM 222 CZ ARG A 23 215.648 246.633 222.482 1.00 91.61 ATOM 223 NH1 ARG A 23 216.714 245.954 222.091 1.00 91.42 ATOM 224 NH2 ARG A 23 214.477 246.390 221.914 1.00 91.63 ATOM 225 N SER A 24 217.328 253.733 224.113 1.00 92.28 ATOM 226 CA SER A 24 218.218 254.759 223.502 1.00 92.44 ATOM 227 C SER A 24 218.758 255.714 224.580 1.00 92.92 ATOM 228 O SER A 24 218.758 256.941 224.340 1.00 92.66 ATOM 229 CB SER A 24 217.490 255.502 222.405 1.00 92.18 ATOM 230 OG SER A 24 216.916 254.598 221.472 1.00 91.47 ATOM 231 N LYS A 25 219.204 255.170 225.722 1.00 93.95 ATOM 232 CA LYS A 25 219.897 255.910 226.815 1.00 94.16 ATOM 233 C LYS A 25 220.998 255.019 227.404 1.00 93.57 ATOM 234 O LYS A 25 222.182 255.190 227.111 1.00 92.50 ATOM 235 CB LYS A 25 218.912 256.339 227.908 1.00 94.12 ATOM 236 CG LYS A 25 217.981 257.490 227.542 1.00 94.47 ATOM 237 CD LYS A 25 217.324 258.134 228.749 1.00 94.33 ATOM 238 CE LYS A 25 216.527 259.377 228.417 1.00 93.79 ATOM 239 NZ LYS A 25 215.879 259.947 229.622 1.00 93.64 TER