HEADER RIBOSOME 31-DEC-69 6P5K TITLE Structure of a mammalian 80S ribosome in complex with the Israeli TITLE 2 Acute Paralysis Virus IRES (Class 3) COMPND MOL_ID: 42; COMPND 2 MOLECULE: eL41; COMPND 3 CHAIN: An; EXPDTA ELECTRON MICROSCOPY DBREF 6P5K A 1 25 UNP A0A087WN A0A087WNH4_ 1 25 SEQRES 1 An 25 MET ARG ALA LYS TRP ARG LYS LYS ARG MET ARG ARG LEU SEQRES 2 An 25 LYS ARG LYS ARG ARG LYS MET ARG GLN ARG SER LYS ATOM 1 N MET A 1 183.614 248.660 226.843 1.00 55.93 ATOM 2 CA MET A 1 184.760 249.263 227.565 1.00 55.77 ATOM 3 C MET A 1 184.233 250.234 228.625 1.00 55.61 ATOM 4 O MET A 1 183.452 251.139 228.267 1.00 55.50 ATOM 5 CB MET A 1 185.693 250.015 226.610 1.00 55.89 ATOM 6 CG MET A 1 186.869 250.677 227.305 1.00 56.10 ATOM 7 SD MET A 1 188.044 249.504 228.029 1.00 55.88 ATOM 8 CE MET A 1 188.975 249.042 226.571 1.00 55.79 ATOM 9 N ARG A 2 184.662 250.040 229.874 1.00 55.78 ATOM 10 CA ARG A 2 184.444 250.977 231.004 1.00 56.03 ATOM 11 C ARG A 2 185.544 252.043 230.956 1.00 56.08 ATOM 12 O ARG A 2 186.694 251.685 230.630 1.00 56.14 ATOM 13 CB ARG A 2 184.470 250.207 232.327 1.00 56.21 ATOM 14 CG ARG A 2 183.840 250.946 233.497 1.00 56.44 ATOM 15 CD ARG A 2 184.251 250.362 234.836 1.00 56.66 ATOM 16 NE ARG A 2 183.762 249.013 235.085 1.00 56.97 ATOM 17 CZ ARG A 2 183.854 248.370 236.251 1.00 57.21 ATOM 18 NH1 ARG A 2 183.369 247.143 236.361 1.00 57.45 ATOM 19 NH2 ARG A 2 184.419 248.943 237.304 1.00 56.93 ATOM 20 N ALA A 3 185.206 253.295 231.284 1.00 56.17 ATOM 21 CA ALA A 3 186.128 254.459 231.277 1.00 56.13 ATOM 22 C ALA A 3 187.260 254.265 232.301 1.00 55.91 ATOM 23 O ALA A 3 188.317 254.905 232.130 1.00 56.04 ATOM 24 CB ALA A 3 185.360 255.735 231.533 1.00 56.11 ATOM 25 N LYS A 4 187.048 253.420 233.318 1.00 55.65 ATOM 26 CA LYS A 4 188.057 253.051 234.349 1.00 55.62 ATOM 27 C LYS A 4 189.133 252.134 233.754 1.00 55.65 ATOM 28 O LYS A 4 190.301 252.266 234.171 1.00 55.69 ATOM 29 CB LYS A 4 187.377 252.340 235.521 1.00 55.80 ATOM 30 CG LYS A 4 188.195 252.244 236.797 1.00 55.85 ATOM 31 CD LYS A 4 187.445 251.577 237.923 1.00 55.89 ATOM 32 CE LYS A 4 188.232 251.612 239.210 1.00 55.94 ATOM 33 NZ LYS A 4 187.720 250.644 240.210 1.00 56.01 ATOM 34 N TRP A 5 188.752 251.219 232.854 1.00 55.52 ATOM 35 CA TRP A 5 189.662 250.216 232.233 1.00 55.43 ATOM 36 C TRP A 5 190.293 250.780 230.955 1.00 55.90 ATOM 37 O TRP A 5 191.442 250.393 230.660 1.00 56.05 ATOM 38 CB TRP A 5 188.941 248.894 231.949 1.00 55.10 ATOM 39 CG TRP A 5 188.128 248.351 233.085 1.00 54.75 ATOM 40 CD1 TRP A 5 186.868 247.836 233.000 1.00 54.61 ATOM 41 CD2 TRP A 5 188.501 248.262 234.473 1.00 54.59 ATOM 42 NE1 TRP A 5 186.427 247.436 234.231 1.00 54.60 ATOM 43 CE2 TRP A 5 187.406 247.683 235.155 1.00 54.57 ATOM 44 CE3 TRP A 5 189.641 248.609 235.211 1.00 54.66 ATOM 45 CZ2 TRP A 5 187.422 247.448 236.529 1.00 54.51 ATOM 46 CZ3 TRP A 5 189.655 248.378 236.570 1.00 54.74 ATOM 47 CH2 TRP A 5 188.557 247.809 237.219 1.00 54.63 ATOM 48 N ARG A 6 189.566 251.630 230.216 1.00 56.50 ATOM 49 CA ARG A 6 190.119 252.438 229.093 1.00 56.77 ATOM 50 C ARG A 6 191.336 253.209 229.618 1.00 56.46 ATOM 51 O ARG A 6 192.388 253.157 228.957 1.00 56.74 ATOM 52 CB ARG A 6 189.055 253.379 228.514 1.00 57.27 ATOM 53 CG ARG A 6 189.534 254.283 227.384 1.00 57.98 ATOM 54 CD ARG A 6 190.006 253.559 226.131 1.00 58.48 ATOM 55 NE ARG A 6 188.944 252.813 225.466 1.00 58.87 ATOM 56 CZ ARG A 6 187.950 253.338 224.743 1.00 59.36 ATOM 57 NH1 ARG A 6 187.845 254.648 224.570 1.00 59.50 ATOM 58 NH2 ARG A 6 187.047 252.540 224.195 1.00 59.43 ATOM 59 N LYS A 7 191.186 253.862 230.777 1.00 56.04 ATOM 60 CA LYS A 7 192.273 254.542 231.535 1.00 55.88 ATOM 61 C LYS A 7 193.410 253.550 231.815 1.00 56.09 ATOM 62 O LYS A 7 194.570 253.891 231.518 1.00 56.30 ATOM 63 CB LYS A 7 191.730 255.116 232.848 1.00 55.72 ATOM 64 CG LYS A 7 192.729 255.910 233.680 1.00 55.77 ATOM 65 CD LYS A 7 192.106 256.600 234.871 1.00 55.81 ATOM 66 CE LYS A 7 193.046 257.582 235.534 1.00 56.03 ATOM 67 NZ LYS A 7 192.403 258.282 236.671 1.00 56.11 ATOM 68 N LYS A 8 193.081 252.373 232.362 1.00 56.10 ATOM 69 CA LYS A 8 194.054 251.316 232.757 1.00 56.20 ATOM 70 C LYS A 8 194.836 250.825 231.530 1.00 56.67 ATOM 71 O LYS A 8 196.036 250.528 231.688 1.00 56.82 ATOM 72 CB LYS A 8 193.346 250.147 233.451 1.00 55.98 ATOM 73 CG LYS A 8 194.260 249.247 234.271 1.00 55.72 ATOM 74 CD LYS A 8 193.519 248.245 235.126 1.00 55.63 ATOM 75 CE LYS A 8 194.423 247.535 236.112 1.00 55.49 ATOM 76 NZ LYS A 8 194.710 248.369 237.304 1.00 55.39 ATOM 77 N ARG A 9 194.188 250.749 230.361 1.00 57.16 ATOM 78 CA ARG A 9 194.812 250.288 229.089 1.00 57.56 ATOM 79 C ARG A 9 195.651 251.409 228.460 1.00 58.13 ATOM 80 O ARG A 9 196.536 251.067 227.660 1.00 58.45 ATOM 81 CB ARG A 9 193.759 249.765 228.107 1.00 57.57 ATOM 82 CG ARG A 9 193.567 248.256 228.178 1.00 57.72 ATOM 83 CD ARG A 9 192.454 247.716 227.300 1.00 57.58 ATOM 84 NE ARG A 9 192.504 248.197 225.924 1.00 57.49 ATOM 85 CZ ARG A 9 191.759 247.744 224.918 1.00 57.66 ATOM 86 NH1 ARG A 9 191.904 248.278 223.716 1.00 57.79 ATOM 87 NH2 ARG A 9 190.882 246.768 225.101 1.00 57.62 ATOM 88 N MET A 10 195.384 252.681 228.786 1.00 58.59 ATOM 89 CA MET A 10 196.245 253.832 228.395 1.00 59.07 ATOM 90 C MET A 10 197.479 253.881 229.305 1.00 58.99 ATOM 91 O MET A 10 198.555 254.251 228.800 1.00 59.18 ATOM 92 CB MET A 10 195.496 255.169 228.476 1.00 59.90 ATOM 93 CG MET A 10 194.369 255.325 227.460 1.00 60.71 ATOM 94 SD MET A 10 194.821 254.899 225.756 1.00 61.81 ATOM 95 CE MET A 10 196.093 256.120 225.440 1.00 61.70 ATOM 96 N ARG A 11 197.336 253.512 230.584 1.00 59.22 ATOM 97 CA ARG A 11 198.434 253.540 231.592 1.00 59.46 ATOM 98 C ARG A 11 199.454 252.432 231.292 1.00 59.71 ATOM 99 O ARG A 11 200.658 252.722 231.401 1.00 59.79 ATOM 100 CB ARG A 11 197.874 253.442 233.015 1.00 59.47 ATOM 101 CG ARG A 11 197.229 254.729 233.507 1.00 59.57 ATOM 102 CD ARG A 11 196.853 254.665 234.974 1.00 59.80 ATOM 103 NE ARG A 11 196.560 255.986 235.517 1.00 59.90 ATOM 104 CZ ARG A 11 196.377 256.268 236.807 1.00 59.88 ATOM 105 NH1 ARG A 11 196.449 255.320 237.730 1.00 60.00 ATOM 106 NH2 ARG A 11 196.119 257.513 237.171 1.00 59.85 ATOM 107 N ARG A 12 198.996 251.224 230.936 1.00 60.17 ATOM 108 CA ARG A 12 199.854 250.092 230.477 1.00 60.62 ATOM 109 C ARG A 12 200.557 250.460 229.163 1.00 60.53 ATOM 110 O ARG A 12 201.739 250.104 229.000 1.00 60.81 ATOM 111 CB ARG A 12 199.028 248.825 230.233 1.00 60.92 ATOM 112 CG ARG A 12 198.459 248.172 231.483 1.00 61.24 ATOM 113 CD ARG A 12 197.438 247.119 231.094 1.00 61.43 ATOM 114 NE ARG A 12 196.679 246.592 232.221 1.00 61.51 ATOM 115 CZ ARG A 12 195.603 245.811 232.121 1.00 61.55 ATOM 116 NH1 ARG A 12 195.132 245.447 230.936 1.00 61.54 ATOM 117 NH2 ARG A 12 194.994 245.391 233.217 1.00 61.43 ATOM 118 N LEU A 13 199.830 251.119 228.256 1.00 60.37 ATOM 119 CA LEU A 13 200.273 251.484 226.880 1.00 60.34 ATOM 120 C LEU A 13 201.342 252.587 226.956 1.00 60.29 ATOM 121 O LEU A 13 202.339 252.482 226.217 1.00 60.42 ATOM 122 CB LEU A 13 199.016 251.880 226.090 1.00 60.40 ATOM 123 CG LEU A 13 199.159 252.477 224.686 1.00 60.61 ATOM 124 CD1 LEU A 13 199.226 253.997 224.738 1.00 60.72 ATOM 125 CD2 LEU A 13 200.327 251.890 223.901 1.00 60.85 ATOM 126 N LYS A 14 201.167 253.582 227.835 1.00 60.32 ATOM 127 CA LYS A 14 202.179 254.641 228.126 1.00 60.36 ATOM 128 C LYS A 14 203.429 254.021 228.766 1.00 60.65 ATOM 129 O LYS A 14 204.546 254.441 228.404 1.00 60.86 ATOM 130 CB LYS A 14 201.618 255.702 229.077 1.00 60.32 ATOM 131 CG LYS A 14 200.626 256.680 228.465 1.00 60.39 ATOM 132 CD LYS A 14 199.911 257.518 229.501 1.00 60.39 ATOM 133 CE LYS A 14 200.811 258.539 230.164 1.00 60.33 ATOM 134 NZ LYS A 14 200.095 259.288 231.223 1.00 60.26 ATOM 135 N ARG A 15 203.231 253.084 229.700 1.00 60.93 ATOM 136 CA ARG A 15 204.289 252.297 230.400 1.00 61.11 ATOM 137 C ARG A 15 205.175 251.583 229.368 1.00 60.84 ATOM 138 O ARG A 15 206.399 251.502 229.594 1.00 60.76 ATOM 139 CB ARG A 15 203.626 251.283 231.341 1.00 61.75 ATOM 140 CG ARG A 15 204.441 250.859 232.555 1.00 62.45 ATOM 141 CD ARG A 15 203.502 250.210 233.558 1.00 62.96 ATOM 142 NE ARG A 15 204.069 249.975 234.878 1.00 63.37 ATOM 143 CZ ARG A 15 203.385 249.524 235.933 1.00 63.90 ATOM 144 NH1 ARG A 15 204.002 249.346 237.090 1.00 64.07 ATOM 145 NH2 ARG A 15 202.091 249.251 235.837 1.00 63.90 ATOM 146 N LYS A 16 204.564 251.090 228.284 1.00 60.78 ATOM 147 CA LYS A 16 205.218 250.357 227.164 1.00 60.70 ATOM 148 C LYS A 16 205.989 251.326 226.252 1.00 60.31 ATOM 149 O LYS A 16 206.887 250.851 225.531 1.00 60.40 ATOM 150 CB LYS A 16 204.149 249.586 226.381 1.00 61.18 ATOM 151 CG LYS A 16 204.652 248.597 225.337 1.00 61.69 ATOM 152 CD LYS A 16 203.539 247.979 224.513 1.00 62.04 ATOM 153 CE LYS A 16 202.674 247.000 225.282 1.00 62.29 ATOM 154 NZ LYS A 16 203.408 245.760 225.628 1.00 62.39 ATOM 155 N ARG A 17 205.653 252.622 226.262 1.00 60.11 ATOM 156 CA ARG A 17 206.303 253.666 225.417 1.00 60.06 ATOM 157 C ARG A 17 207.554 254.210 226.122 1.00 60.73 ATOM 158 O ARG A 17 208.536 254.497 225.410 1.00 60.99 ATOM 159 CB ARG A 17 205.302 254.769 225.059 1.00 59.51 ATOM 160 CG ARG A 17 204.284 254.339 224.014 1.00 58.94 ATOM 161 CD ARG A 17 203.147 255.327 223.852 1.00 58.71 ATOM 162 NE ARG A 17 202.242 254.941 222.775 1.00 58.55 ATOM 163 CZ ARG A 17 201.067 255.513 222.509 1.00 58.18 ATOM 164 NH1 ARG A 17 200.611 256.507 223.255 1.00 58.15 ATOM 165 NH2 ARG A 17 200.333 255.066 221.503 1.00 58.14 ATOM 166 N ARG A 18 207.526 254.348 227.453 1.00 61.67 ATOM 167 CA ARG A 18 208.731 254.622 228.288 1.00 62.63 ATOM 168 C ARG A 18 209.695 253.432 228.190 1.00 63.16 ATOM 169 O ARG A 18 210.920 253.665 228.199 1.00 63.49 ATOM 170 CB ARG A 18 208.350 254.876 229.750 1.00 62.94 ATOM 171 CG ARG A 18 207.611 256.185 229.988 1.00 63.22 ATOM 172 CD ARG A 18 207.355 256.420 231.464 1.00 63.62 ATOM 173 NE ARG A 18 206.446 255.431 232.034 1.00 63.92 ATOM 174 CZ ARG A 18 206.163 255.299 233.331 1.00 64.20 ATOM 175 NH1 ARG A 18 206.717 256.096 234.231 1.00 64.45 ATOM 176 NH2 ARG A 18 205.318 254.360 233.725 1.00 64.06 ATOM 177 N LYS A 19 209.150 252.212 228.113 1.00 63.61 ATOM 178 CA LYS A 19 209.894 250.934 227.939 1.00 64.13 ATOM 179 C LYS A 19 210.673 250.946 226.613 1.00 64.09 ATOM 180 O LYS A 19 211.821 250.456 226.615 1.00 64.43 ATOM 181 CB LYS A 19 208.911 249.758 228.019 1.00 64.82 ATOM 182 CG LYS A 19 209.477 248.374 227.727 1.00 65.42 ATOM 183 CD LYS A 19 210.556 247.936 228.691 1.00 65.89 ATOM 184 CE LYS A 19 211.057 246.537 228.405 1.00 66.25 ATOM 185 NZ LYS A 19 209.980 245.526 228.538 1.00 66.34 ATOM 186 N MET A 20 210.084 251.486 225.537 1.00 64.03 ATOM 187 CA MET A 20 210.597 251.372 224.140 1.00 64.18 ATOM 188 C MET A 20 211.337 252.643 223.691 1.00 63.81 ATOM 189 O MET A 20 212.091 252.542 222.703 1.00 63.96 ATOM 190 CB MET A 20 209.453 251.070 223.166 1.00 64.81 ATOM 191 CG MET A 20 208.905 249.660 223.307 1.00 65.44 ATOM 192 SD MET A 20 210.060 248.387 222.728 1.00 66.05 ATOM 193 CE MET A 20 209.476 246.966 223.650 1.00 66.07 ATOM 194 N ARG A 21 211.134 253.788 224.355 1.00 63.57 ATOM 195 CA ARG A 21 211.967 255.010 224.159 1.00 63.54 ATOM 196 C ARG A 21 213.354 254.785 224.779 1.00 64.01 ATOM 197 O ARG A 21 214.338 255.303 224.213 1.00 64.25 ATOM 198 CB ARG A 21 211.311 256.255 224.767 1.00 63.35 ATOM 199 CG ARG A 21 210.266 256.915 223.878 1.00 63.20 ATOM 200 CD ARG A 21 209.823 258.244 224.457 1.00 63.18 ATOM 201 NE ARG A 21 210.807 259.297 224.206 1.00 63.03 ATOM 202 CZ ARG A 21 210.672 260.326 223.363 1.00 63.03 ATOM 203 NH1 ARG A 21 209.571 260.499 222.650 1.00 63.16 ATOM 204 NH2 ARG A 21 211.653 261.205 223.235 1.00 63.13 ATOM 205 N GLN A 22 213.420 254.044 225.893 1.00 64.28 ATOM 206 CA GLN A 22 214.668 253.736 226.648 1.00 64.37 ATOM 207 C GLN A 22 215.575 252.810 225.822 1.00 63.87 ATOM 208 O GLN A 22 216.801 252.849 226.049 1.00 64.11 ATOM 209 CB GLN A 22 214.325 253.124 228.010 1.00 64.91 ATOM 210 CG GLN A 22 215.473 253.148 229.015 1.00 65.33 ATOM 211 CD GLN A 22 216.308 251.890 229.025 1.00 65.99 ATOM 212 OE1 GLN A 22 215.794 250.773 229.020 1.00 66.38 ATOM 213 NE2 GLN A 22 217.619 252.066 229.061 1.00 66.08 ATOM 214 N ARG A 23 215.005 252.021 224.900 1.00 63.10 ATOM 215 CA ARG A 23 215.756 251.138 223.961 1.00 62.75 ATOM 216 C ARG A 23 216.617 251.975 223.000 1.00 62.83 ATOM 217 O ARG A 23 217.616 251.423 222.495 1.00 62.91 ATOM 218 CB ARG A 23 214.803 250.226 223.178 1.00 62.33 ATOM 219 CG ARG A 23 214.231 249.072 223.991 1.00 62.16 ATOM 220 CD ARG A 23 213.751 247.933 223.110 1.00 61.82 ATOM 221 NE ARG A 23 214.861 247.233 222.471 1.00 61.52 ATOM 222 CZ ARG A 23 214.759 246.375 221.453 1.00 61.44 ATOM 223 NH1 ARG A 23 215.853 245.812 220.964 1.00 61.42 ATOM 224 NH2 ARG A 23 213.583 246.082 220.918 1.00 61.40 ATOM 225 N SER A 24 216.248 253.239 222.753 1.00 63.03 ATOM 226 CA SER A 24 216.961 254.189 221.854 1.00 63.39 ATOM 227 C SER A 24 217.838 255.169 222.649 1.00 63.64 ATOM 228 O SER A 24 218.811 255.680 222.058 1.00 63.52 ATOM 229 CB SER A 24 215.976 254.921 220.983 1.00 63.38 ATOM 230 OG SER A 24 215.123 254.001 220.320 1.00 63.20 ATOM 231 N LYS A 25 217.511 255.424 223.924 1.00 64.30 ATOM 232 CA LYS A 25 218.235 256.371 224.818 1.00 64.84 ATOM 233 C LYS A 25 219.204 255.586 225.711 1.00 64.74 ATOM 234 O LYS A 25 220.422 255.669 225.555 1.00 64.48 ATOM 235 CB LYS A 25 217.236 257.166 225.665 1.00 65.13 ATOM 236 CG LYS A 25 216.289 258.067 224.884 1.00 65.40 ATOM 237 CD LYS A 25 215.253 258.723 225.768 1.00 65.59 ATOM 238 CE LYS A 25 214.449 259.799 225.072 1.00 65.49 ATOM 239 NZ LYS A 25 213.627 260.567 226.039 1.00 65.54 TER